Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313990 | sp|P38414|LOX1_LENCU | 76.532 | 865 | 199 | 4 | 8 | 871 | 5 | 866 | 0.0 | 1399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313990 | G7LIX6 | 91.160 | 871 | 75 | 2 | 1 | 871 | 1 | 869 | 0.0 | 1649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1313990 | Msa1314000 | 0.848960 | 4.392490e-60 | -8.615850e-47 |
| Msa1313990 | Msa1333080 | 0.801290 | 9.653989e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313990 | MtrunA17_Chr8g0342921 | 91.160 | 871 | 75 | 2 | 1 | 871 | 1 | 869 | 0.0 | 1649 |
| Msa1313990 | MtrunA17_Chr8g0342891 | 82.081 | 865 | 148 | 3 | 7 | 871 | 4 | 861 | 0.0 | 1489 |
| Msa1313990 | MtrunA17_Chr8g0342971 | 77.892 | 873 | 188 | 5 | 1 | 871 | 1 | 870 | 0.0 | 1419 |
| Msa1313990 | MtrunA17_Chr8g0342951 | 77.956 | 871 | 189 | 3 | 1 | 871 | 1 | 868 | 0.0 | 1409 |
| Msa1313990 | MtrunA17_Chr8g0344211 | 76.119 | 871 | 205 | 3 | 1 | 871 | 1 | 868 | 0.0 | 1405 |
| Msa1313990 | MtrunA17_Chr8g0343011 | 76.261 | 872 | 199 | 4 | 1 | 871 | 1 | 865 | 0.0 | 1400 |
| Msa1313990 | MtrunA17_Chr8g0342931 | 86.835 | 752 | 97 | 2 | 120 | 871 | 1 | 750 | 0.0 | 1368 |
| Msa1313990 | MtrunA17_Chr8g0342901 | 74.134 | 866 | 182 | 7 | 7 | 871 | 4 | 828 | 0.0 | 1310 |
| Msa1313990 | MtrunA17_Chr2g0329911 | 68.234 | 872 | 265 | 6 | 1 | 871 | 1 | 861 | 0.0 | 1250 |
| Msa1313990 | MtrunA17_Chr8g0342881 | 67.949 | 858 | 265 | 4 | 14 | 871 | 9 | 856 | 0.0 | 1231 |
| Msa1313990 | MtrunA17_Chr2g0329901 | 65.138 | 872 | 294 | 6 | 1 | 871 | 1 | 863 | 0.0 | 1198 |
| Msa1313990 | MtrunA17_Chr5g0406871 | 65.242 | 866 | 291 | 8 | 10 | 871 | 8 | 867 | 0.0 | 1175 |
| Msa1313990 | MtrunA17_Chr8g0343021 | 63.091 | 867 | 311 | 7 | 8 | 871 | 4 | 864 | 0.0 | 1150 |
| Msa1313990 | MtrunA17_Chr8g0343031 | 63.194 | 864 | 311 | 6 | 10 | 871 | 7 | 865 | 0.0 | 1149 |
| Msa1313990 | MtrunA17_Chr3g0120071 | 61.201 | 866 | 323 | 8 | 8 | 871 | 4 | 858 | 0.0 | 1113 |
| Msa1313990 | MtrunA17_Chr8g0343001 | 62.312 | 865 | 263 | 10 | 9 | 871 | 4 | 807 | 0.0 | 1077 |
| Msa1313990 | MtrunA17_Chr8g0342991 | 61.850 | 865 | 267 | 10 | 9 | 871 | 4 | 807 | 0.0 | 1070 |
| Msa1313990 | MtrunA17_Chr8g0342981 | 62.485 | 821 | 261 | 12 | 66 | 871 | 35 | 823 | 0.0 | 1022 |
| Msa1313990 | MtrunA17_Chr1g0191921 | 58.257 | 872 | 326 | 10 | 10 | 871 | 15 | 858 | 0.0 | 1018 |
| Msa1313990 | MtrunA17_Chr7g0272791 | 55.809 | 878 | 350 | 10 | 7 | 871 | 15 | 867 | 0.0 | 996 |
| Msa1313990 | MtrunA17_Chr1g0205611 | 54.091 | 880 | 361 | 11 | 9 | 871 | 3 | 856 | 0.0 | 965 |
| Msa1313990 | MtrunA17_Chr8g0344201 | 44.891 | 822 | 436 | 10 | 58 | 870 | 113 | 926 | 0.0 | 720 |
| Msa1313990 | MtrunA17_Chr8g0344241 | 80.000 | 395 | 79 | 0 | 477 | 871 | 67 | 461 | 0.0 | 681 |
| Msa1313990 | MtrunA17_Chr8g0344241 | 66.667 | 60 | 20 | 0 | 296 | 355 | 9 | 68 | 1.36e-19 | 92.8 |
| Msa1313990 | MtrunA17_Chr3g0118651 | 42.640 | 856 | 454 | 16 | 35 | 871 | 66 | 903 | 0.0 | 662 |
| Msa1313990 | MtrunA17_Chr8g0377101 | 42.701 | 822 | 442 | 14 | 65 | 871 | 109 | 916 | 0.0 | 648 |
| Msa1313990 | MtrunA17_Chr3g0118641 | 42.705 | 843 | 446 | 19 | 48 | 871 | 78 | 902 | 0.0 | 643 |
| Msa1313990 | MtrunA17_Chr4g0047281 | 42.488 | 812 | 429 | 10 | 67 | 870 | 113 | 894 | 0.0 | 635 |
| Msa1313990 | MtrunA17_Chr8g0338451 | 40.872 | 849 | 457 | 19 | 29 | 854 | 24 | 850 | 0.0 | 626 |
| Msa1313990 | MtrunA17_Chr4g0033171 | 45.607 | 717 | 362 | 12 | 169 | 871 | 23 | 725 | 0.0 | 617 |
| Msa1313990 | MtrunA17_Chr3g0118621 | 44.171 | 772 | 405 | 14 | 114 | 871 | 106 | 865 | 0.0 | 598 |
| Msa1313990 | MtrunA17_Chr6g0471951 | 40.159 | 503 | 257 | 6 | 334 | 832 | 18 | 480 | 4.63e-128 | 393 |
| Msa1313990 | MtrunA17_Chr7g0218231 | 58.871 | 124 | 50 | 1 | 518 | 640 | 9 | 132 | 1.00e-42 | 152 |
| Msa1313990 | MtrunA17_Chr6g0468081 | 58.427 | 89 | 36 | 1 | 553 | 640 | 1 | 89 | 2.00e-27 | 106 |
| Msa1313990 | MtrunA17_Chr4g0047271 | 40.659 | 91 | 54 | 0 | 780 | 870 | 1 | 91 | 9.60e-17 | 76.3 |
| Msa1313990 | MtrunA17_Chr3g0137991 | 38.583 | 127 | 58 | 4 | 747 | 871 | 1 | 109 | 6.15e-15 | 71.6 |
| Msa1313990 | MtrunA17_Chr7g0272781 | 42.188 | 64 | 36 | 1 | 762 | 825 | 7 | 69 | 1.82e-12 | 64.3 |
| Msa1313990 | MtrunA17_Chr2g0277191 | 50.000 | 56 | 28 | 0 | 744 | 799 | 58 | 113 | 2.50e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313990 | AT1G55020.1 | 54.719 | 890 | 353 | 13 | 1 | 871 | 1 | 859 | 0.0 | 988 |
| Msa1313990 | AT3G22400.1 | 53.872 | 878 | 360 | 10 | 14 | 871 | 34 | 886 | 0.0 | 966 |
| Msa1313990 | AT1G72520.1 | 43.674 | 822 | 446 | 10 | 58 | 871 | 114 | 926 | 0.0 | 705 |
| Msa1313990 | AT1G17420.1 | 44.268 | 820 | 429 | 12 | 65 | 871 | 115 | 919 | 0.0 | 696 |
| Msa1313990 | AT3G45140.1 | 43.621 | 823 | 418 | 18 | 66 | 871 | 103 | 896 | 0.0 | 652 |
| Msa1313990 | AT3G45140.2 | 45.065 | 770 | 387 | 17 | 119 | 871 | 4 | 754 | 0.0 | 642 |
| Msa1313990 | AT1G67560.1 | 42.840 | 824 | 437 | 16 | 65 | 871 | 111 | 917 | 0.0 | 635 |
Find 214 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTACTTCAAGACCAATTT+TGG | 0.126052 | 8_4:-12302217 | Msa1313990:CDS |
| CATCATGCAGCTGTTAATTT+TGG | 0.165788 | 8_4:-12299498 | Msa1313990:CDS |
| CTTTAGGCGGTGGAAACTTT+AGG | 0.212536 | 8_4:+12301224 | None:intergenic |
| AAACCATGAAACTCTTTAAA+TGG | 0.236986 | 8_4:+12299050 | None:intergenic |
| GACTGTCCTGCTCCCAAAAT+TGG | 0.244809 | 8_4:+12302204 | None:intergenic |
| ATTCTGAACTGCAAGCATTT+TGG | 0.253825 | 8_4:-12299638 | Msa1313990:CDS |
| AGAGAAATGAAGGTGATTTA+TGG | 0.264238 | 8_4:-12299266 | Msa1313990:CDS |
| GTATGTAAAGCCTGTTGTTT+TGG | 0.275481 | 8_4:+12300668 | None:intergenic |
| TACCTAAGGATCTACTTAAA+AGG | 0.289180 | 8_4:-12300044 | Msa1313990:intron |
| CTTTAAATGGAGATACTATT+AGG | 0.290249 | 8_4:+12299063 | None:intergenic |
| GCTTCAACACCTTCCTTTGC+AGG | 0.294317 | 8_4:+12300460 | None:intergenic |
| GTTTAGCTGTAACTGTTCTT+TGG | 0.296790 | 8_4:+12300832 | None:intergenic |
| AGGTTGGCTCGTCCCGTTAT+TGG | 0.315062 | 8_4:-12301729 | Msa1313990:CDS |
| TTTAGGCGGTGGAAACTTTA+GGG | 0.316613 | 8_4:+12301225 | None:intergenic |
| GAAATACAAGAGTTTATGTT+TGG | 0.320716 | 8_4:-12298864 | Msa1313990:three_prime_UTR |
| GAAAACTTATATTGAAGGTT+TGG | 0.323504 | 8_4:-12302238 | Msa1313990:CDS |
| ATTGTCTTCTATATTATATA+AGG | 0.338316 | 8_4:-12300091 | Msa1313990:CDS |
| TTCTGATTCACAGCCATTAG+AGG | 0.344188 | 8_4:-12299241 | Msa1313990:CDS |
| CTGCTGATGGACTAGAGATA+TGG | 0.344271 | 8_4:-12299731 | Msa1313990:CDS |
| GCGGTATTTAGCTTGCTCTT+TGG | 0.360788 | 8_4:+12300884 | None:intergenic |
| CATTCATCATAGCAACTAAT+AGG | 0.364278 | 8_4:-12300260 | Msa1313990:CDS |
| TTCTATATTATATAAGGATT+GGG | 0.367518 | 8_4:-12300085 | Msa1313990:CDS |
| TCTCCATTTAAAGAGTTTCA+TGG | 0.368215 | 8_4:-12299053 | Msa1313990:exon |
| GTTGATGCAAAAGAATGTTT+TGG | 0.371877 | 8_4:-12303912 | Msa1313990:CDS |
| CTTCTATATTATATAAGGAT+TGG | 0.372281 | 8_4:-12300086 | Msa1313990:CDS |
| AATAGTGACATGGGAGTTCC+AGG | 0.372687 | 8_4:-12302156 | Msa1313990:CDS |
| TGAGTTGCATACAAAGTTGA+TGG | 0.380177 | 8_4:+12302053 | None:intergenic |
| GAAGAATTGAAGACTTTAAG+AGG | 0.384903 | 8_4:-12301840 | Msa1313990:CDS |
| AAGGTGTTGAAGCTTCTATT+TGG | 0.386060 | 8_4:-12300450 | Msa1313990:CDS |
| TCATCAAAGCTGGTAAATTC+TGG | 0.386583 | 8_4:+12301355 | None:intergenic |
| TGACCAAATGCTTCATCTCT+TGG | 0.391905 | 8_4:+12301475 | None:intergenic |
| GGAAGCAAAAGTTTATGAAT+AGG | 0.397518 | 8_4:+12300219 | None:intergenic |
| AAGCTTGCACTATCCTCATA+TGG | 0.398096 | 8_4:-12299533 | Msa1313990:CDS |
| TTAGAGGCTTTCAAGAGGTT+TGG | 0.400753 | 8_4:-12299225 | Msa1313990:CDS |
| TATAGAATCGACATTCTTGA+TGG | 0.401972 | 8_4:-12300130 | Msa1313990:CDS |
| TTTAGTCAAAAGTGGATTCA+AGG | 0.402942 | 8_4:-12303849 | Msa1313990:CDS |
| CTCATTTGAGAGTTAGAGAA+TGG | 0.403162 | 8_4:+12298777 | None:intergenic |
| AGGAAGTGGAAAAGGGAAAG+TGG | 0.405738 | 8_4:-12302265 | Msa1313990:CDS |
| TCCTTAGGTAGTCCTTGATC+TGG | 0.409091 | 8_4:+12300057 | None:intergenic |
| TGGTATATTCATTACCTTGT+TGG | 0.409146 | 8_4:+12301984 | None:intergenic |
| TTAAGTATATATCCTCCATA+TGG | 0.416729 | 8_4:+12299468 | None:intergenic |
| CTTTCTTAGGCATGAGTCTC+CGG | 0.418058 | 8_4:+12299430 | None:intergenic |
| CATCCTCAGGCTGATAGCTT+TGG | 0.418449 | 8_4:-12300505 | Msa1313990:CDS |
| CAAGAGGTTTGGAAGGAAGT+TGG | 0.421338 | 8_4:-12299214 | Msa1313990:CDS |
| GTCAATCCTTCCTCACTAGA+AGG | 0.421532 | 8_4:+12299099 | None:intergenic |
| AACCTCTTGAAAGCCTCTAA+TGG | 0.421972 | 8_4:+12299228 | None:intergenic |
| AAGCTATCAGCCTGAGGATG+TGG | 0.423011 | 8_4:+12300508 | None:intergenic |
| GTTCCAAGAGATGAAGCATT+TGG | 0.423704 | 8_4:-12301478 | Msa1313990:CDS |
| GGAAAGAAAACTTATATTGA+AGG | 0.426654 | 8_4:-12302243 | Msa1313990:CDS |
| ATGATACCTTGAATCACTTT+AGG | 0.427924 | 8_4:+12301208 | None:intergenic |
| GTAATTGCAGATTGTAATTG+AGG | 0.430422 | 8_4:+12301394 | None:intergenic |
| TTAGAGAATGGATTCTCTCT+TGG | 0.431457 | 8_4:+12298789 | None:intergenic |
| CCACCGCCTAAAGTGATTCA+AGG | 0.436675 | 8_4:-12301214 | Msa1313990:intron |
| ATATTTGCAGGAAGTGGAAA+AGG | 0.438855 | 8_4:-12302273 | Msa1313990:intron |
| GGAGAGTAAACATCACTAAC+AGG | 0.439169 | 8_4:+12300481 | None:intergenic |
| TTGAAGACTTTAAGAGGAGA+TGG | 0.440165 | 8_4:-12301834 | Msa1313990:CDS |
| TCTAGTCCATCAGCAGCATA+AGG | 0.440778 | 8_4:+12299738 | None:intergenic |
| CTACTTAGCTCAATGGCTAA+TGG | 0.442112 | 8_4:+12300532 | None:intergenic |
| TCGGCGCTTCTGTGGCTCTC+AGG | 0.442747 | 8_4:-12303778 | Msa1313990:CDS |
| TTCTATTTGGCTCCTTGCCA+AGG | 0.442825 | 8_4:-12300437 | Msa1313990:CDS |
| GAAGCAAAAGTTTATGAATA+GGG | 0.443422 | 8_4:+12300220 | None:intergenic |
| TATTTAGCTTGCTCTTTGGT+GGG | 0.448907 | 8_4:+12300888 | None:intergenic |
| CAGCAAATTAAGATGTATGC+AGG | 0.449069 | 8_4:-12303983 | Msa1313990:exon |
| TGGAGAGAAGTTGTAGAGGT+GGG | 0.451733 | 8_4:-12299618 | Msa1313990:CDS |
| ATGCAGTTCATCAGTCTGAA+TGG | 0.455164 | 8_4:-12301100 | Msa1313990:intron |
| TTCTCAATATAAAATGCTCC+TGG | 0.455314 | 8_4:+12302138 | None:intergenic |
| GTATTTAGCTTGCTCTTTGG+TGG | 0.456559 | 8_4:+12300887 | None:intergenic |
| AAGTTGATGGTTCCATGGTT+GGG | 0.460112 | 8_4:+12302066 | None:intergenic |
| TTGTTTGTTTGTTTGTTGGT+TGG | 0.461324 | 8_4:-12298962 | Msa1313990:three_prime_UTR |
| CGAATGCCATGTGGGGAAGT+TGG | 0.465729 | 8_4:+12299780 | None:intergenic |
| AAGCTAAATACCGCAGATTA+CGG | 0.469705 | 8_4:-12300875 | Msa1313990:CDS |
| CTTCCGAACTGATGGTGAAT+CGG | 0.470853 | 8_4:-12301248 | Msa1313990:CDS |
| AAGGGTAGTCCTCTATTAGA+AGG | 0.473232 | 8_4:+12299757 | None:intergenic |
| GAAGGATAAAGCAGAGTGTA+TGG | 0.473368 | 8_4:+12299117 | None:intergenic |
| CTTTATCCTTCTAGTGAGGA+AGG | 0.474629 | 8_4:-12299105 | Msa1313990:CDS |
| AAAGTTGATGGTTCCATGGT+TGG | 0.474634 | 8_4:+12302065 | None:intergenic |
| TTTGCAAGGCAGATGATTGC+TGG | 0.478814 | 8_4:-12301062 | Msa1313990:CDS |
| ACACATTATCAAAAGACTTC+AGG | 0.479420 | 8_4:-12301030 | Msa1313990:intron |
| ACAAGACCTCTATGATTGTA+AGG | 0.479513 | 8_4:+12299322 | None:intergenic |
| CGGAGACTCATGCCTAAGAA+AGG | 0.480181 | 8_4:-12299429 | Msa1313990:CDS |
| CATGGTTGGGAATATCTTCA+AGG | 0.483337 | 8_4:+12302079 | None:intergenic |
| ATGAGTCTCCGGCTCTTAGT+TGG | 0.483617 | 8_4:+12299441 | None:intergenic |
| GTGTCGGATCCTCCAATAAC+GGG | 0.484538 | 8_4:+12301717 | None:intergenic |
| AGCATATGCCTTTGTTGTAT+CGG | 0.484620 | 8_4:+12300597 | None:intergenic |
| TACTCAGCAGACCCTTTCTT+AGG | 0.485780 | 8_4:+12299417 | None:intergenic |
| AAGGTTTGTGCAAATCTAGT+TGG | 0.487214 | 8_4:-12298820 | Msa1313990:three_prime_UTR |
| AACTAGATTTGCACAAACCT+TGG | 0.488512 | 8_4:+12298822 | None:intergenic |
| AATGGATCCGGTGTTTCACT+TGG | 0.491637 | 8_4:+12301879 | None:intergenic |
| AATAGGCTATCCAAAACAAC+AGG | 0.491780 | 8_4:-12300678 | Msa1313990:intron |
| CTATTAGTTGCTATGATGAA+TGG | 0.495301 | 8_4:+12300261 | None:intergenic |
| GCTTTCTAAGAACTTTCAAA+AGG | 0.498523 | 8_4:-12299388 | Msa1313990:CDS |
| TGGCATTCGCCTTCTAATAG+AGG | 0.498737 | 8_4:-12299766 | Msa1313990:CDS |
| GCTAAGTAGCCCACATCCTC+AGG | 0.499939 | 8_4:-12300518 | Msa1313990:CDS |
| CTTCAAGGGTCAAACTTACA+AGG | 0.503229 | 8_4:+12302094 | None:intergenic |
| AGATCCTAAAAGTGAGAGTC+GGG | 0.505237 | 8_4:-12301515 | Msa1313990:CDS |
| CACCTTCATTTCTCTGTCCA+AGG | 0.506173 | 8_4:+12299274 | None:intergenic |
| TTTACCAGTGGCTGACAAGT+TGG | 0.506230 | 8_4:+12300383 | None:intergenic |
| AAGGAAGTTGGCTGAAATTG+AGG | 0.507352 | 8_4:-12299202 | Msa1313990:CDS |
| TAAGTATATATCCTCCATAT+GGG | 0.508811 | 8_4:+12299469 | None:intergenic |
| TCAACTTTGTATGCAACTCA+TGG | 0.512939 | 8_4:-12302050 | Msa1313990:CDS |
| ACCACTCGTTTAGTCAAAAG+TGG | 0.514195 | 8_4:-12303857 | Msa1313990:CDS |
| GTTTAAGATGCAAACTTGCT+CGG | 0.515286 | 8_4:-12299565 | Msa1313990:CDS |
| CTAGTCCATCAGCAGCATAA+GGG | 0.516437 | 8_4:+12299739 | None:intergenic |
| GACACCGCCACGTGCTTCAT+CGG | 0.516603 | 8_4:-12303797 | Msa1313990:CDS |
| TGCTGATGGACTAGAGATAT+GGG | 0.516726 | 8_4:-12299730 | Msa1313990:CDS |
| TTGGACGTCAATGCCTTCAA+TGG | 0.517154 | 8_4:-12303893 | Msa1313990:CDS |
| GGGCCGATTCACCATCAGTT+CGG | 0.517224 | 8_4:+12301245 | None:intergenic |
| AGCAGCACAAGGAACATGAT+AGG | 0.517413 | 8_4:-12301803 | Msa1313990:CDS |
| CCTTGAATCACTTTAGGCGG+TGG | 0.518065 | 8_4:+12301214 | None:intergenic |
| ATTTACAATAACATAAGCCT+TGG | 0.520482 | 8_4:+12300420 | None:intergenic |
| TTGGCTCGTCCCGTTATTGG+AGG | 0.520705 | 8_4:-12301726 | Msa1313990:CDS |
| GAAGTTGTAGAGGTGGGTCA+TGG | 0.521933 | 8_4:-12299612 | Msa1313990:CDS |
| AGTTTGCTAAGTAGACTAGT+AGG | 0.522000 | 8_4:+12301298 | None:intergenic |
| AAGGAACTCTTCCGAACTGA+TGG | 0.522819 | 8_4:-12301256 | Msa1313990:CDS |
| AGGCTTTCAAGAGGTTTGGA+AGG | 0.526553 | 8_4:-12299221 | Msa1313990:CDS |
| CCCAGATCAAGGACTACCTA+AGG | 0.527546 | 8_4:-12300058 | Msa1313990:CDS |
| AGAGTGTATGGCATCTTCAC+AGG | 0.527638 | 8_4:+12299129 | None:intergenic |
| GGAAGTGGAAAAGGGAAAGT+GGG | 0.528628 | 8_4:-12302264 | Msa1313990:CDS |
| GACTTTAAGAGGAGATGGAA+AGG | 0.530818 | 8_4:-12301829 | Msa1313990:CDS |
| TGCACTTGCAAGGAGTGTCT+TGG | 0.531139 | 8_4:-12300169 | Msa1313990:CDS |
| CACCTTCCCTTACCCTCGAA+GGG | 0.532497 | 8_4:-12301697 | Msa1313990:CDS |
| TACCTTGGACAGAGAAATGA+AGG | 0.533440 | 8_4:-12299276 | Msa1313990:CDS |
| GTGATCCTGACAAGGACAAA+AGG | 0.535684 | 8_4:-12301749 | Msa1313990:CDS |
| CTACGATGTTTACAATGACT+TGG | 0.535774 | 8_4:-12301772 | Msa1313990:CDS |
| ATCTAGAGGAGTGGCTGTTG+AGG | 0.538554 | 8_4:-12299805 | Msa1313990:intron |
| GCATCTTCACAGGCCCGTAT+CGG | 0.542185 | 8_4:+12299139 | None:intergenic |
| CTATAGTAGACCAATGGATC+CGG | 0.543527 | 8_4:+12301867 | None:intergenic |
| ATGTGGGCTACTTAGCTCAA+TGG | 0.548079 | 8_4:+12300525 | None:intergenic |
| TTCACCAACTTGTCAGCCAC+TGG | 0.549213 | 8_4:-12300387 | Msa1313990:intron |
| CAGTTACAGCTAAACATGGA+TGG | 0.551540 | 8_4:-12300824 | Msa1313990:CDS |
| ACACCTTCCCTTACCCTCGA+AGG | 0.552144 | 8_4:-12301698 | Msa1313990:CDS |
| AAGTGAAACACCGGATCCAT+TGG | 0.553426 | 8_4:-12301877 | Msa1313990:CDS |
| GTGCTTCATCGGCGCTTCTG+TGG | 0.553819 | 8_4:-12303786 | Msa1313990:CDS |
| AGTTACAGCTAAACATGGAT+GGG | 0.553988 | 8_4:-12300823 | Msa1313990:CDS |
| GGTGTCGGATCCTCCAATAA+CGG | 0.554285 | 8_4:+12301716 | None:intergenic |
| GACTACCCTTATGCTGCTGA+TGG | 0.554343 | 8_4:-12299744 | Msa1313990:CDS |
| GCTTCTGATGAGCAATACCT+TGG | 0.559094 | 8_4:-12299291 | Msa1313990:CDS |
| TCTTGTCTATAGTAGACCAA+TGG | 0.563104 | 8_4:+12301861 | None:intergenic |
| CCTTAGGTAGTCCTTGATCT+GGG | 0.563454 | 8_4:+12300058 | None:intergenic |
| TGACCGCACATCATCAAAGC+TGG | 0.563563 | 8_4:+12301345 | None:intergenic |
| GATCCGGTGTTTCACTTGGA+AGG | 0.563997 | 8_4:+12301883 | None:intergenic |
| GGAGACTCATGCCTAAGAAA+GGG | 0.566816 | 8_4:-12299428 | Msa1313990:CDS |
| GACCTCTATGATTGTAAGGT+CGG | 0.567446 | 8_4:+12299326 | None:intergenic |
| GTCTCCGGCTCTTAGTTGGT+CGG | 0.573160 | 8_4:+12299445 | None:intergenic |
| AGCTATCAGCCTGAGGATGT+GGG | 0.574193 | 8_4:+12300509 | None:intergenic |
| TATTTGCAGGAAGTGGAAAA+GGG | 0.576884 | 8_4:-12302272 | Msa1313990:intron |
| CAATAACATAAGCCTTGGCA+AGG | 0.577264 | 8_4:+12300425 | None:intergenic |
| TTGGAGAGAAGTTGTAGAGG+TGG | 0.579539 | 8_4:-12299619 | Msa1313990:CDS |
| ATGGGATGCTATCAAGTCAT+GGG | 0.582556 | 8_4:-12299712 | Msa1313990:CDS |
| GTAGTCAAATTACCTCATCA+TGG | 0.587071 | 8_4:-12298998 | Msa1313990:three_prime_UTR |
| AGTCATTGAGAAACCGATAC+GGG | 0.587451 | 8_4:-12299152 | Msa1313990:CDS |
| TTGAGGCAAAGCTCATTGAA+AGG | 0.587750 | 8_4:-12299185 | Msa1313990:CDS |
| TATGGGATGCTATCAAGTCA+TGG | 0.588056 | 8_4:-12299713 | Msa1313990:CDS |
| GTGCTGAAGCAATCCATATG+AGG | 0.588956 | 8_4:+12299520 | None:intergenic |
| ATTAGTGCTACCACTTCTGA+TGG | 0.589441 | 8_4:-12303752 | Msa1313990:intron |
| TAAGTTGTTACCATCAGAAG+TGG | 0.592151 | 8_4:+12303742 | None:intergenic |
| ATAGAATCGACATTCTTGAT+GGG | 0.594278 | 8_4:-12300129 | Msa1313990:CDS |
| CAGATCCTAAAAGTGAGAGT+CGG | 0.598343 | 8_4:-12301516 | Msa1313990:CDS |
| GAGTCATTGAGAAACCGATA+CGG | 0.598611 | 8_4:-12299153 | Msa1313990:CDS |
| GTTTACTCTCCTGCAAAGGA+AGG | 0.598673 | 8_4:-12300469 | Msa1313990:CDS |
| ACTTTAAGAGGAGATGGAAA+GGG | 0.598877 | 8_4:-12301828 | Msa1313990:CDS |
| ATGGTTGGGAATATCTTCAA+GGG | 0.600178 | 8_4:+12302080 | None:intergenic |
| TATGATTGTAAGGTCGGTGA+GGG | 0.600912 | 8_4:+12299332 | None:intergenic |
| TCGCATCTTCTTTGCCAACA+AGG | 0.601787 | 8_4:-12301998 | Msa1313990:intron |
| ATACAAAGTTGATGGTTCCA+TGG | 0.604917 | 8_4:+12302061 | None:intergenic |
| TACGATGTTTACAATGACTT+GGG | 0.606736 | 8_4:-12301771 | Msa1313990:CDS |
| AAATTGGTGATAATACATGA+AGG | 0.608519 | 8_4:-12298730 | None:intergenic |
| GATATGGATATATTGAGTCA+TGG | 0.608683 | 8_4:+12300638 | None:intergenic |
| TGATGTTTACTCTCCTGCAA+AGG | 0.611448 | 8_4:-12300473 | Msa1313990:CDS |
| TCCTGACAAGGACAAAAGGT+TGG | 0.612773 | 8_4:-12301745 | Msa1313990:CDS |
| TTCATTGTATCACGATAGTG+TGG | 0.617016 | 8_4:+12300198 | None:intergenic |
| GAGGAAGGATTGACTTGCAG+AGG | 0.621733 | 8_4:-12299090 | Msa1313990:CDS |
| ACTCAATATATCCATATCTG+AGG | 0.622340 | 8_4:-12300633 | Msa1313990:CDS |
| ATACCTTGAATCACTTTAGG+CGG | 0.623642 | 8_4:+12301211 | None:intergenic |
| ACTTTCAAAAGGCGTATCTG+AGG | 0.625035 | 8_4:-12299377 | Msa1313990:CDS |
| TTTGGTCAATACCCATATGG+AGG | 0.625329 | 8_4:-12299480 | Msa1313990:CDS |
| TTACCAGCTTTGATGATGTG+CGG | 0.627282 | 8_4:-12301348 | Msa1313990:CDS |
| TTAACCGACCAACTAAGAGC+CGG | 0.627312 | 8_4:-12299449 | Msa1313990:CDS |
| GAGTGTCTTGGTAAATGCAG+AGG | 0.628961 | 8_4:-12300157 | Msa1313990:CDS |
| TGGAAAGGGTCAGCAGCACA+AGG | 0.629018 | 8_4:-12301814 | Msa1313990:CDS |
| AAAATTAATTAATAACACCA+AGG | 0.631372 | 8_4:-12298839 | Msa1313990:three_prime_UTR |
| CTATGATTGTAAGGTCGGTG+AGG | 0.631961 | 8_4:+12299331 | None:intergenic |
| AACTAATAGGCATCTTAGTG+TGG | 0.632027 | 8_4:-12300247 | Msa1313990:CDS |
| TCTGCTTTATCCTTCTAGTG+AGG | 0.633317 | 8_4:-12299109 | Msa1313990:CDS |
| TTAGAAGGCGAATGCCATGT+GGG | 0.633442 | 8_4:+12299772 | None:intergenic |
| AGAACAGTTACAGCTAAACA+TGG | 0.634430 | 8_4:-12300828 | Msa1313990:CDS |
| TGAACGATGAAGAATTTGCA+AGG | 0.635571 | 8_4:-12301076 | Msa1313990:CDS |
| CTTGAAGATATTCCCAACCA+TGG | 0.635623 | 8_4:-12302078 | Msa1313990:CDS |
| GAGGATCCAACTTCCCCACA+TGG | 0.635853 | 8_4:-12299786 | Msa1313990:CDS |
| TTTGAATGGAATAGTGACAT+GGG | 0.637458 | 8_4:-12302165 | Msa1313990:CDS |
| TGAACATTAATGCACTTGCA+AGG | 0.638089 | 8_4:-12300179 | Msa1313990:CDS |
| ATTAGAAGGCGAATGCCATG+TGG | 0.638188 | 8_4:+12299771 | None:intergenic |
| AAATGCAGCCGATACAACAA+AGG | 0.638731 | 8_4:-12300605 | Msa1313990:CDS |
| AGTGTCTTGGTAAATGCAGA+GGG | 0.642136 | 8_4:-12300156 | Msa1313990:CDS |
| AGCAAATTAAGATGTATGCA+GGG | 0.642640 | 8_4:-12303982 | Msa1313990:exon |
| CACCGACCTTACAATCATAG+AGG | 0.647578 | 8_4:-12299328 | Msa1313990:CDS |
| ACATGTCTAACACATACAAG+AGG | 0.648178 | 8_4:+12298892 | None:intergenic |
| ACCTTCCCTTACCCTCGAAG+GGG | 0.650241 | 8_4:-12301696 | Msa1313990:CDS |
| CGTATTATCACCGTAATCTG+CGG | 0.652895 | 8_4:+12300865 | None:intergenic |
| TGACTTGGGTGATCCTGACA+AGG | 0.655255 | 8_4:-12301757 | Msa1313990:CDS |
| ATACCTTCCAAGTGAAACAC+CGG | 0.657265 | 8_4:-12301886 | Msa1313990:CDS |
| CAATCATAGAGGTCTTGTCA+AGG | 0.657780 | 8_4:-12299317 | Msa1313990:CDS |
| AGCCATTAGAGGCTTTCAAG+AGG | 0.658271 | 8_4:-12299230 | Msa1313990:CDS |
| GCATGATATATCTAGAGGAG+TGG | 0.664308 | 8_4:-12299814 | Msa1313990:intron |
| GTTACAGCTAAACATGGATG+GGG | 0.665834 | 8_4:-12300822 | Msa1313990:CDS |
| TCGAGGGTAAGGGAAGGTGT+CGG | 0.674471 | 8_4:+12301701 | None:intergenic |
| TAGAAGGCGAATGCCATGTG+GGG | 0.675767 | 8_4:+12299773 | None:intergenic |
| ATAACAACATGACCATGATG+AGG | 0.680824 | 8_4:+12298986 | None:intergenic |
| CCTTCCCTTACCCTCGAAGG+GGG | 0.681885 | 8_4:-12301695 | Msa1313990:CDS |
| AGAAGCGCCGATGAAGCACG+TGG | 0.691984 | 8_4:+12303790 | None:intergenic |
| GGACCAAAGCTATCAGCCTG+AGG | 0.704451 | 8_4:+12300502 | None:intergenic |
| AGCGCCGATGAAGCACGTGG+CGG | 0.706765 | 8_4:+12303793 | None:intergenic |
| GTGATTTGAAGAATGCTACA+TGG | 0.707488 | 8_4:-12299590 | Msa1313990:CDS |
| ATTTGAAGAATGCTACATGG+TGG | 0.753052 | 8_4:-12299587 | Msa1313990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTTGAGATATTTATA+AGG | + | chr8_4:12299330-12299349 | None:intergenic | 10.0% |
| !! | TAGAATAAATACAAATATTA+TGG | - | chr8_4:12301599-12301618 | Msa1313990:intron | 10.0% |
| !!! | TAAATTATATTTTGTTGAAT+AGG | - | chr8_4:12302050-12302069 | Msa1313990:CDS | 10.0% |
| !!! | AGTTTTGTATATTTTAAAAT+TGG | - | chr8_4:12303999-12304018 | Msa1313990:five_prime_UTR | 10.0% |
| !! | CTAAAAAAAAAAAAAAACTG+AGG | + | chr8_4:12299975-12299994 | None:intergenic | 15.0% |
| !!! | CTCAATAAAGTTTTTTTTAT+AGG | + | chr8_4:12300066-12300085 | None:intergenic | 15.0% |
| !! | CTATAAAAAAAACTTTATTG+AGG | - | chr8_4:12300064-12300083 | Msa1313990:CDS | 15.0% |
| !! | CCACTAATTATAATTAATAA+AGG | + | chr8_4:12300345-12300364 | None:intergenic | 15.0% |
| !! | CCTTTATTAATTATAATTAG+TGG | - | chr8_4:12300342-12300361 | Msa1313990:intron | 15.0% |
| !! | TGATTGAAATACAATAAATA+AGG | - | chr8_4:12300377-12300396 | Msa1313990:intron | 15.0% |
| !! | GATTGAAATACAATAAATAA+GGG | - | chr8_4:12300378-12300397 | Msa1313990:intron | 15.0% |
| !!! | CTATATTTTAATTCATATGA+TGG | + | chr8_4:12300837-12300856 | None:intergenic | 15.0% |
| !! | AAAGTTCTATCTTAAATTAA+TGG | - | chr8_4:12301112-12301131 | Msa1313990:intron | 15.0% |
| !! | TGAAAATATAGTATGTAAAA+TGG | + | chr8_4:12301794-12301813 | None:intergenic | 15.0% |
| !!! | TTACTTGTTATATATAATGT+AGG | - | chr8_4:12301830-12301849 | Msa1313990:CDS | 15.0% |
| !! | ATAATGTGAATATATAACTT+AGG | - | chr8_4:12301982-12302001 | Msa1313990:intron | 15.0% |
| !! | ATTGTCTTCTATATTATATA+AGG | - | chr8_4:12302654-12302673 | Msa1313990:intron | 15.0% |
| !! | TTCTATATTATATAAGGATT+GGG | - | chr8_4:12302660-12302679 | Msa1313990:intron | 15.0% |
| !!! | ACTAGTAACTAATTTTTTTA+AGG | + | chr8_4:12302730-12302749 | None:intergenic | 15.0% |
| !!! | GATTTTAAAATTTCTATTGT+AGG | + | chr8_4:12302855-12302874 | None:intergenic | 15.0% |
| !!! | CAATAGAAATTTTAAAATCT+TGG | - | chr8_4:12302856-12302875 | Msa1313990:intron | 15.0% |
| !! | AAAATTAATTAATAACACCA+AGG | - | chr8_4:12303906-12303925 | Msa1313990:CDS | 15.0% |
| !! | TATTCATTAAATGATGTATG+TGG | + | chr8_4:12299160-12299179 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAAATCAACATTT+TGG | + | chr8_4:12299186-12299205 | None:intergenic | 20.0% |
| !! | TAAAGAAAGGAATCAATAAA+TGG | - | chr8_4:12299874-12299893 | Msa1313990:intron | 20.0% |
| !! | AAAGAAAGGAATCAATAAAT+GGG | - | chr8_4:12299875-12299894 | Msa1313990:intron | 20.0% |
| !! | TAAAAAAAACTTTATTGAGG+TGG | - | chr8_4:12300067-12300086 | Msa1313990:CDS | 20.0% |
| !!! | AAAATACCTAATTTAAGACA+GGG | + | chr8_4:12300169-12300188 | None:intergenic | 20.0% |
| !!! | AAAAATACCTAATTTAAGAC+AGG | + | chr8_4:12300170-12300189 | None:intergenic | 20.0% |
| !!! | CATATGATATTCATTTTGAA+TGG | - | chr8_4:12300566-12300585 | Msa1313990:CDS | 20.0% |
| !! | ATAGTTTATATTTAACATGC+AGG | + | chr8_4:12300794-12300813 | None:intergenic | 20.0% |
| !!! | ATCATTTTCTTACAAAATGA+TGG | - | chr8_4:12302180-12302199 | Msa1313990:CDS | 20.0% |
| !! | ATTAATTCATGAATATCTAC+AGG | - | chr8_4:12302437-12302456 | Msa1313990:intron | 20.0% |
| !! | CTTCTATATTATATAAGGAT+TGG | - | chr8_4:12302659-12302678 | Msa1313990:intron | 20.0% |
| !!! | TATTTTGTTTGTTTGTTTGT+TGG | - | chr8_4:12303779-12303798 | Msa1313990:CDS | 20.0% |
| ! | TTTGCTAAAAATAACTTCGA+AGG | + | chr8_4:12299386-12299405 | None:intergenic | 25.0% |
| !!! | TTGATAACTTCAGCAAATTT+TGG | + | chr8_4:12299410-12299429 | None:intergenic | 25.0% |
| ! | AGTTAAACGAAAAAAGAATC+CGG | + | chr8_4:12299593-12299612 | None:intergenic | 25.0% |
| !! | ATTGATTCCTTTCTTTACAT+GGG | + | chr8_4:12299871-12299890 | None:intergenic | 25.0% |
| !!! | TATTGATTCCTTTCTTTACA+TGG | + | chr8_4:12299872-12299891 | None:intergenic | 25.0% |
| !! | TCATGCTATAAATAAGCTTT+TGG | + | chr8_4:12300021-12300040 | None:intergenic | 25.0% |
| !! | AAATACCTAATTTAAGACAG+GGG | + | chr8_4:12300168-12300187 | None:intergenic | 25.0% |
| !! | ACTGATGGAGTATTATAAAA+AGG | + | chr8_4:12300227-12300246 | None:intergenic | 25.0% |
| ! | CAAATTTGTAACATATTTGC+AGG | - | chr8_4:12300460-12300479 | Msa1313990:CDS | 25.0% |
| ! | GGAAAGAAAACTTATATTGA+AGG | - | chr8_4:12300502-12300521 | Msa1313990:CDS | 25.0% |
| ! | GAAAACTTATATTGAAGGTT+TGG | - | chr8_4:12300507-12300526 | Msa1313990:CDS | 25.0% |
| ! | TTTAACATGCAGGATAAATA+TGG | + | chr8_4:12300784-12300803 | None:intergenic | 25.0% |
| !!! | GAATTATAACCTTTTTTAGC+TGG | + | chr8_4:12301091-12301110 | None:intergenic | 25.0% |
| !!! | AGAGAAAATGTTTTGATCAT+AGG | + | chr8_4:12301139-12301158 | None:intergenic | 25.0% |
| ! | ATTTACAATAACATAAGCCT+TGG | + | chr8_4:12302328-12302347 | None:intergenic | 25.0% |
| ! | GAAGCAAAAGTTTATGAATA+GGG | + | chr8_4:12302528-12302547 | None:intergenic | 25.0% |
| ! | TAAGTATATATCCTCCATAT+GGG | + | chr8_4:12303279-12303298 | None:intergenic | 25.0% |
| ! | TTAAGTATATATCCTCCATA+TGG | + | chr8_4:12303280-12303299 | None:intergenic | 25.0% |
| ! | CTTTAAATGGAGATACTATT+AGG | + | chr8_4:12303685-12303704 | None:intergenic | 25.0% |
| ! | AAACCATGAAACTCTTTAAA+TGG | + | chr8_4:12303698-12303717 | None:intergenic | 25.0% |
| ! | GAAATACAAGAGTTTATGTT+TGG | - | chr8_4:12303881-12303900 | Msa1313990:CDS | 25.0% |
| AGCAAATTAAGATGTATGCA+GGG | - | chr8_4:12298763-12298782 | Msa1313990:three_prime_UTR | 30.0% | |
| TTGAAAAATGTGGTTAACAG+AGG | - | chr8_4:12298786-12298805 | Msa1313990:three_prime_UTR | 30.0% | |
| ! | GTTGATGCAAAAGAATGTTT+TGG | - | chr8_4:12298833-12298852 | Msa1313990:three_prime_UTR | 30.0% |
| ! | TTTAGTCAAAAGTGGATTCA+AGG | - | chr8_4:12298896-12298915 | Msa1313990:three_prime_UTR | 30.0% |
| TGTTTATATTAGTGACCGAA+GGG | + | chr8_4:12299082-12299101 | None:intergenic | 30.0% | |
| TTGTTTATATTAGTGACCGA+AGG | + | chr8_4:12299083-12299102 | None:intergenic | 30.0% | |
| ! | TTGTTGCAAAGAGGTTTTTA+GGG | + | chr8_4:12299499-12299518 | None:intergenic | 30.0% |
| ! | TTTGTTGCAAAGAGGTTTTT+AGG | + | chr8_4:12299500-12299519 | None:intergenic | 30.0% |
| ! | AATCGTTGCTAGTTTATTGT+GGG | + | chr8_4:12299621-12299640 | None:intergenic | 30.0% |
| ! | TCATACACACTTGTGATTTT+TGG | + | chr8_4:12299664-12299683 | None:intergenic | 30.0% |
| AGAAAAGATGTAGAGAACTA+AGG | - | chr8_4:12299721-12299740 | Msa1313990:CDS | 30.0% | |
| TTGATTCCTTTCTTTACATG+GGG | + | chr8_4:12299870-12299889 | None:intergenic | 30.0% | |
| CATTAAACAAGACAACTACA+CGG | + | chr8_4:12299903-12299922 | None:intergenic | 30.0% | |
| !! | GCAAAACTCTTGCTTTTAAA+AGG | - | chr8_4:12299994-12300013 | Msa1313990:intron | 30.0% |
| ! | AATACCTAATTTAAGACAGG+GGG | + | chr8_4:12300167-12300186 | None:intergenic | 30.0% |
| TGAGTTGTATGCAGTTATTA+AGG | - | chr8_4:12300265-12300284 | Msa1313990:CDS | 30.0% | |
| ! | GTTACTTCAAGACCAATTTT+GGG | - | chr8_4:12300529-12300548 | Msa1313990:CDS | 30.0% |
| ! | TTTTGAATGGAATAGTGACA+TGG | - | chr8_4:12300579-12300598 | Msa1313990:CDS | 30.0% |
| TTTGAATGGAATAGTGACAT+GGG | - | chr8_4:12300580-12300599 | Msa1313990:CDS | 30.0% | |
| TTCTCAATATAAAATGCTCC+TGG | + | chr8_4:12300610-12300629 | None:intergenic | 30.0% | |
| TGGTATATTCATTACCTTGT+TGG | + | chr8_4:12300764-12300783 | None:intergenic | 30.0% | |
| !! | ATATGATGGTGTCAGATTTT+AGG | + | chr8_4:12300823-12300842 | None:intergenic | 30.0% |
| GAAGAATTGAAGACTTTAAG+AGG | - | chr8_4:12300905-12300924 | Msa1313990:intron | 30.0% | |
| TACGATGTTTACAATGACTT+GGG | - | chr8_4:12300974-12300993 | Msa1313990:intron | 30.0% | |
| GTAATTGCAGATTGTAATTG+AGG | + | chr8_4:12301354-12301373 | None:intergenic | 30.0% | |
| AGTTCCTTGAAAAATGGTAT+GGG | + | chr8_4:12301477-12301496 | None:intergenic | 30.0% | |
| ATGATACCTTGAATCACTTT+AGG | + | chr8_4:12301540-12301559 | None:intergenic | 30.0% | |
| !!! | TGAAGTCTTTTGATAATGTG+TGG | + | chr8_4:12301716-12301735 | None:intergenic | 30.0% |
| ACACATTATCAAAAGACTTC+AGG | - | chr8_4:12301715-12301734 | Msa1313990:CDS | 30.0% | |
| GATATGGATATATTGAGTCA+TGG | + | chr8_4:12302110-12302129 | None:intergenic | 30.0% | |
| ACTCAATATATCCATATCTG+AGG | - | chr8_4:12302112-12302131 | Msa1313990:CDS | 30.0% | |
| !! | GCATTTATTTTCCTCAGATA+TGG | + | chr8_4:12302126-12302145 | None:intergenic | 30.0% |
| ! | CATCATGATAATTTTACCAG+TGG | + | chr8_4:12302377-12302396 | None:intergenic | 30.0% |
| CTATTAGTTGCTATGATGAA+TGG | + | chr8_4:12302487-12302506 | None:intergenic | 30.0% | |
| CATTCATCATAGCAACTAAT+AGG | - | chr8_4:12302485-12302504 | Msa1313990:intron | 30.0% | |
| GGAAGCAAAAGTTTATGAAT+AGG | + | chr8_4:12302529-12302548 | None:intergenic | 30.0% | |
| TATAGAATCGACATTCTTGA+TGG | - | chr8_4:12302615-12302634 | Msa1313990:intron | 30.0% | |
| ATAGAATCGACATTCTTGAT+GGG | - | chr8_4:12302616-12302635 | Msa1313990:intron | 30.0% | |
| TACCTAAGGATCTACTTAAA+AGG | - | chr8_4:12302701-12302720 | Msa1313990:intron | 30.0% | |
| !! | TACCTTTTAAGTAGATCCTT+AGG | + | chr8_4:12302706-12302725 | None:intergenic | 30.0% |
| ! | TATTTTACCACGATTCTCTA+CGG | - | chr8_4:12302816-12302835 | Msa1313990:intron | 30.0% |
| !! | AATTTTGGTCAATACCCATA+TGG | - | chr8_4:12303262-12303281 | Msa1313990:intron | 30.0% |
| ! | GCTTTCTAAGAACTTTCAAA+AGG | - | chr8_4:12303357-12303376 | Msa1313990:intron | 30.0% |
| AGAGAAATGAAGGTGATTTA+TGG | - | chr8_4:12303479-12303498 | Msa1313990:intron | 30.0% | |
| TCTCCATTTAAAGAGTTTCA+TGG | - | chr8_4:12303692-12303711 | Msa1313990:intron | 30.0% | |
| ! | TTGTTTGTTTGTTTGTTGGT+TGG | - | chr8_4:12303783-12303802 | Msa1313990:CDS | 30.0% |
| CAGCAAATTAAGATGTATGC+AGG | - | chr8_4:12298762-12298781 | Msa1313990:three_prime_UTR | 35.0% | |
| !! | GCTTTTAGTTACACCATTGA+AGG | + | chr8_4:12298868-12298887 | None:intergenic | 35.0% |
| TAAGTTGTTACCATCAGAAG+TGG | + | chr8_4:12299006-12299025 | None:intergenic | 35.0% | |
| TGAAGTTATCAAAACCGAAC+CGG | - | chr8_4:12299418-12299437 | Msa1313990:CDS | 35.0% | |
| AAACCTCTTTGCAACAAAAC+CGG | - | chr8_4:12299502-12299521 | Msa1313990:CDS | 35.0% | |
| AACAAAACCGGAATAAAGAC+CGG | - | chr8_4:12299514-12299533 | Msa1313990:CDS | 35.0% | |
| ! | CAATCGTTGCTAGTTTATTG+TGG | + | chr8_4:12299622-12299641 | None:intergenic | 35.0% |
| ! | CAATTTTCGAACTCTCTGTA+GGG | + | chr8_4:12299820-12299839 | None:intergenic | 35.0% |
| ! | ACAATTTTCGAACTCTCTGT+AGG | + | chr8_4:12299821-12299840 | None:intergenic | 35.0% |
| AGAGAGTTCGAAAATTGTGT+TGG | - | chr8_4:12299823-12299842 | Msa1313990:intron | 35.0% | |
| TCGAAAATTGTGTTGGAACT+TGG | - | chr8_4:12299830-12299849 | Msa1313990:intron | 35.0% | |
| ACAAAACCCCATGTAAAGAA+AGG | - | chr8_4:12299861-12299880 | Msa1313990:intron | 35.0% | |
| ! | GACATCTAATCTGAAACTGA+TGG | + | chr8_4:12300242-12300261 | None:intergenic | 35.0% |
| TGTAACATATTTGCAGGAAG+TGG | - | chr8_4:12300466-12300485 | Msa1313990:CDS | 35.0% | |
| ATATTTGCAGGAAGTGGAAA+AGG | - | chr8_4:12300472-12300491 | Msa1313990:CDS | 35.0% | |
| TATTTGCAGGAAGTGGAAAA+GGG | - | chr8_4:12300473-12300492 | Msa1313990:CDS | 35.0% | |
| ! | GGTTACTTCAAGACCAATTT+TGG | - | chr8_4:12300528-12300547 | Msa1313990:CDS | 35.0% |
| ATGGTTGGGAATATCTTCAA+GGG | + | chr8_4:12300668-12300687 | None:intergenic | 35.0% | |
| !! | ATACAAAGTTGATGGTTCCA+TGG | + | chr8_4:12300687-12300706 | None:intergenic | 35.0% |
| TGAGTTGCATACAAAGTTGA+TGG | + | chr8_4:12300695-12300714 | None:intergenic | 35.0% | |
| TCAACTTTGTATGCAACTCA+TGG | - | chr8_4:12300695-12300714 | Msa1313990:intron | 35.0% | |
| TCTTGTCTATAGTAGACCAA+TGG | + | chr8_4:12300887-12300906 | None:intergenic | 35.0% | |
| ! | TTGAAGACTTTAAGAGGAGA+TGG | - | chr8_4:12300911-12300930 | Msa1313990:intron | 35.0% |
| ! | ACTTTAAGAGGAGATGGAAA+GGG | - | chr8_4:12300917-12300936 | Msa1313990:intron | 35.0% |
| CTACGATGTTTACAATGACT+TGG | - | chr8_4:12300973-12300992 | Msa1313990:intron | 35.0% | |
| TCATCAAAGCTGGTAAATTC+TGG | + | chr8_4:12301393-12301412 | None:intergenic | 35.0% | |
| !! | AGTTTGCTAAGTAGACTAGT+AGG | + | chr8_4:12301450-12301469 | None:intergenic | 35.0% |
| GTTCCTTGAAAAATGGTATG+GGG | + | chr8_4:12301476-12301495 | None:intergenic | 35.0% | |
| GAGTTCCTTGAAAAATGGTA+TGG | + | chr8_4:12301478-12301497 | None:intergenic | 35.0% | |
| ATACCTTGAATCACTTTAGG+CGG | + | chr8_4:12301537-12301556 | None:intergenic | 35.0% | |
| TGAACGATGAAGAATTTGCA+AGG | - | chr8_4:12301669-12301688 | Msa1313990:CDS | 35.0% | |
| !! | TATTTAGCTTGCTCTTTGGT+GGG | + | chr8_4:12301860-12301879 | None:intergenic | 35.0% |
| AAGCTAAATACCGCAGATTA+CGG | - | chr8_4:12301870-12301889 | Msa1313990:CDS | 35.0% | |
| GTTTAGCTGTAACTGTTCTT+TGG | + | chr8_4:12301916-12301935 | None:intergenic | 35.0% | |
| AGAACAGTTACAGCTAAACA+TGG | - | chr8_4:12301917-12301936 | Msa1313990:intron | 35.0% | |
| AGTTACAGCTAAACATGGAT+GGG | - | chr8_4:12301922-12301941 | Msa1313990:intron | 35.0% | |
| AATAGGCTATCCAAAACAAC+AGG | - | chr8_4:12302067-12302086 | Msa1313990:CDS | 35.0% | |
| !! | GTATGTAAAGCCTGTTGTTT+TGG | + | chr8_4:12302080-12302099 | None:intergenic | 35.0% |
| ! | AGCATATGCCTTTGTTGTAT+CGG | + | chr8_4:12302151-12302170 | None:intergenic | 35.0% |
| !! | AAGGTGTTGAAGCTTCTATT+TGG | - | chr8_4:12302295-12302314 | Msa1313990:intron | 35.0% |
| AACTAATAGGCATCTTAGTG+TGG | - | chr8_4:12302498-12302517 | Msa1313990:intron | 35.0% | |
| TTCATTGTATCACGATAGTG+TGG | + | chr8_4:12302550-12302569 | None:intergenic | 35.0% | |
| TGAACATTAATGCACTTGCA+AGG | - | chr8_4:12302566-12302585 | Msa1313990:intron | 35.0% | |
| ! | AGTAACCACGATCTAAGATA+AGG | - | chr8_4:12302784-12302803 | Msa1313990:intron | 35.0% |
| TCCTTGCATGATATATCTAG+AGG | - | chr8_4:12302926-12302945 | Msa1313990:intron | 35.0% | |
| TCCTCTAGATATATCATGCA+AGG | + | chr8_4:12302930-12302949 | None:intergenic | 35.0% | |
| ! | ATTCTGAACTGCAAGCATTT+TGG | - | chr8_4:12303107-12303126 | Msa1313990:intron | 35.0% |
| !! | ATTTTGGAGAGAAGTTGTAG+AGG | - | chr8_4:12303123-12303142 | Msa1313990:intron | 35.0% |
| GTGATTTGAAGAATGCTACA+TGG | - | chr8_4:12303155-12303174 | Msa1313990:intron | 35.0% | |
| ATTTGAAGAATGCTACATGG+TGG | - | chr8_4:12303158-12303177 | Msa1313990:intron | 35.0% | |
| ! | GTTTAAGATGCAAACTTGCT+CGG | - | chr8_4:12303180-12303199 | Msa1313990:intron | 35.0% |
| ! | CATCATGCAGCTGTTAATTT+TGG | - | chr8_4:12303247-12303266 | Msa1313990:intron | 35.0% |
| ACAAGACCTCTATGATTGTA+AGG | + | chr8_4:12303426-12303445 | None:intergenic | 35.0% | |
| GTAGTCAAATTACCTCATCA+TGG | - | chr8_4:12303747-12303766 | Msa1313990:intron | 35.0% | |
| ATAACAACATGACCATGATG+AGG | + | chr8_4:12303762-12303781 | None:intergenic | 35.0% | |
| ACATGTCTAACACATACAAG+AGG | + | chr8_4:12303856-12303875 | None:intergenic | 35.0% | |
| AACTAGATTTGCACAAACCT+TGG | + | chr8_4:12303926-12303945 | None:intergenic | 35.0% | |
| AAGGTTTGTGCAAATCTAGT+TGG | - | chr8_4:12303925-12303944 | Msa1313990:CDS | 35.0% | |
| ! | TTAGAGAATGGATTCTCTCT+TGG | + | chr8_4:12303959-12303978 | None:intergenic | 35.0% |
| CTCATTTGAGAGTTAGAGAA+TGG | + | chr8_4:12303971-12303990 | None:intergenic | 35.0% | |
| GTATGCAGGGTTGAAAAATG+TGG | - | chr8_4:12298776-12298795 | Msa1313990:three_prime_UTR | 40.0% | |
| TAACAGAGGCCAAAAAGTGA+AGG | - | chr8_4:12298800-12298819 | Msa1313990:three_prime_UTR | 40.0% | |
| AACAGAGGCCAAAAAGTGAA+GGG | - | chr8_4:12298801-12298820 | Msa1313990:three_prime_UTR | 40.0% | |
| ACCACTCGTTTAGTCAAAAG+TGG | - | chr8_4:12298888-12298907 | Msa1313990:three_prime_UTR | 40.0% | |
| !! | TCCACTTTTGACTAAACGAG+TGG | + | chr8_4:12298892-12298911 | None:intergenic | 40.0% |
| ATTAGTGCTACCACTTCTGA+TGG | - | chr8_4:12298993-12299012 | Msa1313990:three_prime_UTR | 40.0% | |
| TTGCTTATAACAGTGACTGC+AGG | - | chr8_4:12299198-12299217 | Msa1313990:CDS | 40.0% | |
| ACTGCAGGATGTATAACGTT+TGG | - | chr8_4:12299213-12299232 | Msa1313990:CDS | 40.0% | |
| GAAGTTATCAAAACCGAACC+GGG | - | chr8_4:12299419-12299438 | Msa1313990:CDS | 40.0% | |
| !! | AAGAGGTTTTTAGGGAGTTC+CGG | + | chr8_4:12299491-12299510 | None:intergenic | 40.0% |
| !!! | ATTCCGGTTTTGTTGCAAAG+AGG | + | chr8_4:12299508-12299527 | None:intergenic | 40.0% |
| ! | CGATTTTCCGGTCTTTATTC+CGG | + | chr8_4:12299524-12299543 | None:intergenic | 40.0% |
| CGGAATAAAGACCGGAAAAT+CGG | - | chr8_4:12299522-12299541 | Msa1313990:CDS | 40.0% | |
| GGAATAAAGACCGGAAAATC+GGG | - | chr8_4:12299523-12299542 | Msa1313990:CDS | 40.0% | |
| GAGAAGAAGAAAGAGAAGAG+AGG | - | chr8_4:12299752-12299771 | Msa1313990:CDS | 40.0% | |
| TACTCCCCCTGTCTTAAATT+AGG | - | chr8_4:12300160-12300179 | Msa1313990:CDS | 40.0% | |
| CTTCAAGGGTCAAACTTACA+AGG | + | chr8_4:12300654-12300673 | None:intergenic | 40.0% | |
| CATGGTTGGGAATATCTTCA+AGG | + | chr8_4:12300669-12300688 | None:intergenic | 40.0% | |
| CTTGAAGATATTCCCAACCA+TGG | - | chr8_4:12300667-12300686 | Msa1313990:CDS | 40.0% | |
| !! | AAGTTGATGGTTCCATGGTT+GGG | + | chr8_4:12300682-12300701 | None:intergenic | 40.0% |
| !! | AAAGTTGATGGTTCCATGGT+TGG | + | chr8_4:12300683-12300702 | None:intergenic | 40.0% |
| ATACCTTCCAAGTGAAACAC+CGG | - | chr8_4:12300859-12300878 | Msa1313990:CDS | 40.0% | |
| CTATAGTAGACCAATGGATC+CGG | + | chr8_4:12300881-12300900 | None:intergenic | 40.0% | |
| ! | GACTTTAAGAGGAGATGGAA+AGG | - | chr8_4:12300916-12300935 | Msa1313990:intron | 40.0% |
| CAGATCCTAAAAGTGAGAGT+CGG | - | chr8_4:12301229-12301248 | Msa1313990:CDS | 40.0% | |
| AGATCCTAAAAGTGAGAGTC+GGG | - | chr8_4:12301230-12301249 | Msa1313990:CDS | 40.0% | |
| ! | GTTCCAAGAGATGAAGCATT+TGG | - | chr8_4:12301267-12301286 | Msa1313990:CDS | 40.0% |
| TGACCAAATGCTTCATCTCT+TGG | + | chr8_4:12301273-12301292 | None:intergenic | 40.0% | |
| !! | TTACCAGCTTTGATGATGTG+CGG | - | chr8_4:12301397-12301416 | Msa1313990:CDS | 40.0% |
| !! | GATGTGCGGTCATTTTATGA+TGG | - | chr8_4:12301411-12301430 | Msa1313990:CDS | 40.0% |
| !! | TGCGGTCATTTTATGATGGT+GGG | - | chr8_4:12301415-12301434 | Msa1313990:CDS | 40.0% |
| !! | TAGCCCCATACCATTTTTCA+AGG | - | chr8_4:12301470-12301489 | Msa1313990:CDS | 40.0% |
| CGGAAGAGTTCCTTGAAAAA+TGG | + | chr8_4:12301483-12301502 | None:intergenic | 40.0% | |
| TTTAGGCGGTGGAAACTTTA+GGG | + | chr8_4:12301523-12301542 | None:intergenic | 40.0% | |
| ATGCAGTTCATCAGTCTGAA+TGG | - | chr8_4:12301645-12301664 | Msa1313990:intron | 40.0% | |
| !! | GTATTTAGCTTGCTCTTTGG+TGG | + | chr8_4:12301861-12301880 | None:intergenic | 40.0% |
| CGTATTATCACCGTAATCTG+CGG | + | chr8_4:12301883-12301902 | None:intergenic | 40.0% | |
| CAGTTACAGCTAAACATGGA+TGG | - | chr8_4:12301921-12301940 | Msa1313990:intron | 40.0% | |
| GTTACAGCTAAACATGGATG+GGG | - | chr8_4:12301923-12301942 | Msa1313990:intron | 40.0% | |
| ACTTAGGCAATGCTATGTTG+TGG | - | chr8_4:12301998-12302017 | Msa1313990:intron | 40.0% | |
| AAATGCAGCCGATACAACAA+AGG | - | chr8_4:12302140-12302159 | Msa1313990:CDS | 40.0% | |
| GGAGAGTAAACATCACTAAC+AGG | + | chr8_4:12302267-12302286 | None:intergenic | 40.0% | |
| TGATGTTTACTCTCCTGCAA+AGG | - | chr8_4:12302272-12302291 | Msa1313990:intron | 40.0% | |
| CAATAACATAAGCCTTGGCA+AGG | + | chr8_4:12302323-12302342 | None:intergenic | 40.0% | |
| AGTGTCTTGGTAAATGCAGA+GGG | - | chr8_4:12302589-12302608 | Msa1313990:intron | 40.0% | |
| TGATGCCTTATCTTAGATCG+TGG | + | chr8_4:12302792-12302811 | None:intergenic | 40.0% | |
| GCATGATATATCTAGAGGAG+TGG | - | chr8_4:12302931-12302950 | Msa1313990:intron | 40.0% | |
| AAGGGTAGTCCTCTATTAGA+AGG | + | chr8_4:12302991-12303010 | None:intergenic | 40.0% | |
| !! | TGCTGATGGACTAGAGATAT+GGG | - | chr8_4:12303015-12303034 | Msa1313990:intron | 40.0% |
| TATGGGATGCTATCAAGTCA+TGG | - | chr8_4:12303032-12303051 | Msa1313990:intron | 40.0% | |
| ATGGGATGCTATCAAGTCAT+GGG | - | chr8_4:12303033-12303052 | Msa1313990:intron | 40.0% | |
| AAGCTTGCACTATCCTCATA+TGG | - | chr8_4:12303212-12303231 | Msa1313990:intron | 40.0% | |
| TTTGGTCAATACCCATATGG+AGG | - | chr8_4:12303265-12303284 | Msa1313990:intron | 40.0% | |
| ! | ACTTTCAAAAGGCGTATCTG+AGG | - | chr8_4:12303368-12303387 | Msa1313990:intron | 40.0% |
| GAGGACAATCACACCAAAAA+AGG | - | chr8_4:12303387-12303406 | Msa1313990:intron | 40.0% | |
| TATGATTGTAAGGTCGGTGA+GGG | + | chr8_4:12303416-12303435 | None:intergenic | 40.0% | |
| GACCTCTATGATTGTAAGGT+CGG | + | chr8_4:12303422-12303441 | None:intergenic | 40.0% | |
| ! | CAATCATAGAGGTCTTGTCA+AGG | - | chr8_4:12303428-12303447 | Msa1313990:intron | 40.0% |
| TACCTTGGACAGAGAAATGA+AGG | - | chr8_4:12303469-12303488 | Msa1313990:intron | 40.0% | |
| TTCTGATTCACAGCCATTAG+AGG | - | chr8_4:12303504-12303523 | Msa1313990:intron | 40.0% | |
| AACCTCTTGAAAGCCTCTAA+TGG | + | chr8_4:12303520-12303539 | None:intergenic | 40.0% | |
| TTAGAGGCTTTCAAGAGGTT+TGG | - | chr8_4:12303520-12303539 | Msa1313990:intron | 40.0% | |
| AAGGAAGTTGGCTGAAATTG+AGG | - | chr8_4:12303543-12303562 | Msa1313990:intron | 40.0% | |
| TTGAGGCAAAGCTCATTGAA+AGG | - | chr8_4:12303560-12303579 | Msa1313990:intron | 40.0% | |
| GAGTCATTGAGAAACCGATA+CGG | - | chr8_4:12303592-12303611 | Msa1313990:intron | 40.0% | |
| AGTCATTGAGAAACCGATAC+GGG | - | chr8_4:12303593-12303612 | Msa1313990:intron | 40.0% | |
| GAAGGATAAAGCAGAGTGTA+TGG | + | chr8_4:12303631-12303650 | None:intergenic | 40.0% | |
| TCTGCTTTATCCTTCTAGTG+AGG | - | chr8_4:12303636-12303655 | Msa1313990:intron | 40.0% | |
| CTTTATCCTTCTAGTGAGGA+AGG | - | chr8_4:12303640-12303659 | Msa1313990:intron | 40.0% | |
| TTGGACGTCAATGCCTTCAA+TGG | - | chr8_4:12298852-12298871 | Msa1313990:three_prime_UTR | 45.0% | |
| ! | AAGGCTTTTACTAGTGTCGC+TGG | - | chr8_4:12298915-12298934 | Msa1313990:three_prime_UTR | 45.0% |
| AGGAAGTGGAAAAGGGAAAG+TGG | - | chr8_4:12300480-12300499 | Msa1313990:CDS | 45.0% | |
| GGAAGTGGAAAAGGGAAAGT+GGG | - | chr8_4:12300481-12300500 | Msa1313990:CDS | 45.0% | |
| !! | TCAAGACCAATTTTGGGAGC+AGG | - | chr8_4:12300535-12300554 | Msa1313990:CDS | 45.0% |
| AATAGTGACATGGGAGTTCC+AGG | - | chr8_4:12300589-12300608 | Msa1313990:CDS | 45.0% | |
| TCGCATCTTCTTTGCCAACA+AGG | - | chr8_4:12300747-12300766 | Msa1313990:intron | 45.0% | |
| AATGGATCCGGTGTTTCACT+TGG | + | chr8_4:12300869-12300888 | None:intergenic | 45.0% | |
| AAGTGAAACACCGGATCCAT+TGG | - | chr8_4:12300868-12300887 | Msa1313990:CDS | 45.0% | |
| AGCAGCACAAGGAACATGAT+AGG | - | chr8_4:12300942-12300961 | Msa1313990:intron | 45.0% | |
| GTGATCCTGACAAGGACAAA+AGG | - | chr8_4:12300996-12301015 | Msa1313990:intron | 45.0% | |
| TCCTGACAAGGACAAAAGGT+TGG | - | chr8_4:12301000-12301019 | Msa1313990:intron | 45.0% | |
| GGCAGGAAACCAGCTAAAAA+AGG | - | chr8_4:12301079-12301098 | Msa1313990:CDS | 45.0% | |
| !! | GTGCGGTCATTTTATGATGG+TGG | - | chr8_4:12301414-12301433 | Msa1313990:CDS | 45.0% |
| AAGGAACTCTTCCGAACTGA+TGG | - | chr8_4:12301489-12301508 | Msa1313990:CDS | 45.0% | |
| ! | CTTCCGAACTGATGGTGAAT+CGG | - | chr8_4:12301497-12301516 | Msa1313990:CDS | 45.0% |
| CTTTAGGCGGTGGAAACTTT+AGG | + | chr8_4:12301524-12301543 | None:intergenic | 45.0% | |
| TTTGCAAGGCAGATGATTGC+TGG | - | chr8_4:12301683-12301702 | Msa1313990:CDS | 45.0% | |
| !! | GCGGTATTTAGCTTGCTCTT+TGG | + | chr8_4:12301864-12301883 | None:intergenic | 45.0% |
| GTTTACTCTCCTGCAAAGGA+AGG | - | chr8_4:12302276-12302295 | Msa1313990:intron | 45.0% | |
| ! | TTCTATTTGGCTCCTTGCCA+AGG | - | chr8_4:12302308-12302327 | Msa1313990:intron | 45.0% |
| TTTACCAGTGGCTGACAAGT+TGG | + | chr8_4:12302365-12302384 | None:intergenic | 45.0% | |
| GAGTGTCTTGGTAAATGCAG+AGG | - | chr8_4:12302588-12302607 | Msa1313990:intron | 45.0% | |
| ! | GATTGGGTTTTCCCAGATCA+AGG | - | chr8_4:12302676-12302695 | Msa1313990:intron | 45.0% |
| CCTTAGGTAGTCCTTGATCT+GGG | + | chr8_4:12302690-12302709 | None:intergenic | 45.0% | |
| TCCTTAGGTAGTCCTTGATC+TGG | + | chr8_4:12302691-12302710 | None:intergenic | 45.0% | |
| TTAGAAGGCGAATGCCATGT+GGG | + | chr8_4:12302976-12302995 | None:intergenic | 45.0% | |
| ATTAGAAGGCGAATGCCATG+TGG | + | chr8_4:12302977-12302996 | None:intergenic | 45.0% | |
| TGGCATTCGCCTTCTAATAG+AGG | - | chr8_4:12302979-12302998 | Msa1313990:intron | 45.0% | |
| CTAGTCCATCAGCAGCATAA+GGG | + | chr8_4:12303009-12303028 | None:intergenic | 45.0% | |
| TCTAGTCCATCAGCAGCATA+AGG | + | chr8_4:12303010-12303029 | None:intergenic | 45.0% | |
| !! | CTGCTGATGGACTAGAGATA+TGG | - | chr8_4:12303014-12303033 | Msa1313990:intron | 45.0% |
| TTGGAGAGAAGTTGTAGAGG+TGG | - | chr8_4:12303126-12303145 | Msa1313990:intron | 45.0% | |
| TGGAGAGAAGTTGTAGAGGT+GGG | - | chr8_4:12303127-12303146 | Msa1313990:intron | 45.0% | |
| GTGCTGAAGCAATCCATATG+AGG | + | chr8_4:12303228-12303247 | None:intergenic | 45.0% | |
| TTAACCGACCAACTAAGAGC+CGG | - | chr8_4:12303296-12303315 | Msa1313990:intron | 45.0% | |
| CTTTCTTAGGCATGAGTCTC+CGG | + | chr8_4:12303318-12303337 | None:intergenic | 45.0% | |
| GGAGACTCATGCCTAAGAAA+GGG | - | chr8_4:12303317-12303336 | Msa1313990:intron | 45.0% | |
| TACTCAGCAGACCCTTTCTT+AGG | + | chr8_4:12303331-12303350 | None:intergenic | 45.0% | |
| !!! | TCGGTGAGGGTATCCTTTTT+TGG | + | chr8_4:12303403-12303422 | None:intergenic | 45.0% |
| CTATGATTGTAAGGTCGGTG+AGG | + | chr8_4:12303417-12303436 | None:intergenic | 45.0% | |
| CACCGACCTTACAATCATAG+AGG | - | chr8_4:12303417-12303436 | Msa1313990:intron | 45.0% | |
| GCTTCTGATGAGCAATACCT+TGG | - | chr8_4:12303454-12303473 | Msa1313990:intron | 45.0% | |
| CACCTTCATTTCTCTGTCCA+AGG | + | chr8_4:12303474-12303493 | None:intergenic | 45.0% | |
| AGCCATTAGAGGCTTTCAAG+AGG | - | chr8_4:12303515-12303534 | Msa1313990:intron | 45.0% | |
| AGGCTTTCAAGAGGTTTGGA+AGG | - | chr8_4:12303524-12303543 | Msa1313990:intron | 45.0% | |
| CAAGAGGTTTGGAAGGAAGT+TGG | - | chr8_4:12303531-12303550 | Msa1313990:intron | 45.0% | |
| AGAGTGTATGGCATCTTCAC+AGG | + | chr8_4:12303619-12303638 | None:intergenic | 45.0% | |
| GTCAATCCTTCCTCACTAGA+AGG | + | chr8_4:12303649-12303668 | None:intergenic | 45.0% | |
| !!! | GAAATAATTAATATTTTTTT+TGG | - | chr8_4:12300089-12300108 | Msa1313990:CDS | 5.0% |
| !! | CCACTGTGCCCTTCACTTTT+TGG | + | chr8_4:12298812-12298831 | None:intergenic | 50.0% |
| ! | CCAAAAAGTGAAGGGCACAG+TGG | - | chr8_4:12298809-12298828 | Msa1313990:three_prime_UTR | 50.0% |
| ! | CCGAAGGGTATATGTGTGTG+CGG | + | chr8_4:12299067-12299086 | None:intergenic | 50.0% |
| CCGCACACACATATACCCTT+CGG | - | chr8_4:12299064-12299083 | Msa1313990:exon | 50.0% | |
| TTATCAAAACCGAACCGGGC+CGG | - | chr8_4:12299423-12299442 | Msa1313990:CDS | 50.0% | |
| !! | GTTTTTAGGGAGTTCCGGAC+CGG | + | chr8_4:12299486-12299505 | None:intergenic | 50.0% |
| ! | CACTGGGTTTCCCGATTTTC+CGG | + | chr8_4:12299536-12299555 | None:intergenic | 50.0% |
| TCGGGAAACCCAGTGAAAAC+CGG | - | chr8_4:12299541-12299560 | Msa1313990:CDS | 50.0% | |
| !!! | CTCAAACGCCGGTTTTCACT+GGG | + | chr8_4:12299552-12299571 | None:intergenic | 50.0% |
| AGGGTAGAGACTAGAGTGAG+TGG | + | chr8_4:12299801-12299820 | None:intergenic | 50.0% | |
| GACTGTCCTGCTCCCAAAAT+TGG | + | chr8_4:12300544-12300563 | None:intergenic | 50.0% | |
| GATCCGGTGTTTCACTTGGA+AGG | + | chr8_4:12300865-12300884 | None:intergenic | 50.0% | |
| ! | TGACTTGGGTGATCCTGACA+AGG | - | chr8_4:12300988-12301007 | Msa1313990:intron | 50.0% |
| ! | GCCAACCTTTTGTCCTTGTC+AGG | + | chr8_4:12301004-12301023 | None:intergenic | 50.0% |
| GTGTCGGATCCTCCAATAAC+GGG | + | chr8_4:12301031-12301050 | None:intergenic | 50.0% | |
| ! | GGTGTCGGATCCTCCAATAA+CGG | + | chr8_4:12301032-12301051 | None:intergenic | 50.0% |
| !! | TCGTCCCGACTCTCACTTTT+AGG | + | chr8_4:12301237-12301256 | None:intergenic | 50.0% |
| TGACCGCACATCATCAAAGC+TGG | + | chr8_4:12301403-12301422 | None:intergenic | 50.0% | |
| CCTTGAATCACTTTAGGCGG+TGG | + | chr8_4:12301534-12301553 | None:intergenic | 50.0% | |
| CCACCGCCTAAAGTGATTCA+AGG | - | chr8_4:12301531-12301550 | Msa1313990:intron | 50.0% | |
| AGCTATCAGCCTGAGGATGT+GGG | + | chr8_4:12302239-12302258 | None:intergenic | 50.0% | |
| AAGCTATCAGCCTGAGGATG+TGG | + | chr8_4:12302240-12302259 | None:intergenic | 50.0% | |
| CATCCTCAGGCTGATAGCTT+TGG | - | chr8_4:12302240-12302259 | Msa1313990:CDS | 50.0% | |
| GCTTCAACACCTTCCTTTGC+AGG | + | chr8_4:12302288-12302307 | None:intergenic | 50.0% | |
| TTCACCAACTTGTCAGCCAC+TGG | - | chr8_4:12302358-12302377 | Msa1313990:intron | 50.0% | |
| !! | TGCACTTGCAAGGAGTGTCT+TGG | - | chr8_4:12302576-12302595 | Msa1313990:intron | 50.0% |
| CCCAGATCAAGGACTACCTA+AGG | - | chr8_4:12302687-12302706 | Msa1313990:intron | 50.0% | |
| ATCTAGAGGAGTGGCTGTTG+AGG | - | chr8_4:12302940-12302959 | Msa1313990:intron | 50.0% | |
| TAGAAGGCGAATGCCATGTG+GGG | + | chr8_4:12302975-12302994 | None:intergenic | 50.0% | |
| GACTACCCTTATGCTGCTGA+TGG | - | chr8_4:12303001-12303020 | Msa1313990:intron | 50.0% | |
| GAAGTTGTAGAGGTGGGTCA+TGG | - | chr8_4:12303133-12303152 | Msa1313990:intron | 50.0% | |
| ATGAGTCTCCGGCTCTTAGT+TGG | + | chr8_4:12303307-12303326 | None:intergenic | 50.0% | |
| CGGAGACTCATGCCTAAGAA+AGG | - | chr8_4:12303316-12303335 | Msa1313990:intron | 50.0% | |
| !! | GAGGAAGGATTGACTTGCAG+AGG | - | chr8_4:12303655-12303674 | Msa1313990:intron | 50.0% |
| CACGGTCGAATCGGTTGAAC+CGG | + | chr8_4:12299449-12299468 | None:intergenic | 55.0% | |
| ! | GGTTCGGTTCACGGTCGAAT+CGG | + | chr8_4:12299458-12299477 | None:intergenic | 55.0% |
| !!! | GCTCAAACGCCGGTTTTCAC+TGG | + | chr8_4:12299553-12299572 | None:intergenic | 55.0% |
| GTGAAAACCGGCGTTTGAGC+CGG | - | chr8_4:12299553-12299572 | Msa1313990:CDS | 55.0% | |
| !! | TTTGAGCCGGTTTGGGTGGT+TGG | - | chr8_4:12299566-12299585 | Msa1313990:CDS | 55.0% |
| TGGAAAGGGTCAGCAGCACA+AGG | - | chr8_4:12300931-12300950 | Msa1313990:intron | 55.0% | |
| !! | AGGTTGGCTCGTCCCGTTAT+TGG | - | chr8_4:12301016-12301035 | Msa1313990:intron | 55.0% |
| ! | TTGGCTCGTCCCGTTATTGG+AGG | - | chr8_4:12301019-12301038 | Msa1313990:intron | 55.0% |
| ! | TCGAGGGTAAGGGAAGGTGT+CGG | + | chr8_4:12301047-12301066 | None:intergenic | 55.0% |
| ACACCTTCCCTTACCCTCGA+AGG | - | chr8_4:12301047-12301066 | Msa1313990:CDS | 55.0% | |
| CACCTTCCCTTACCCTCGAA+GGG | - | chr8_4:12301048-12301067 | Msa1313990:CDS | 55.0% | |
| ACCTTCCCTTACCCTCGAAG+GGG | - | chr8_4:12301049-12301068 | Msa1313990:CDS | 55.0% | |
| TTCTCCCCCTTCGAGGGTAA+GGG | + | chr8_4:12301057-12301076 | None:intergenic | 55.0% | |
| ! | GGGCCGATTCACCATCAGTT+CGG | + | chr8_4:12301503-12301522 | None:intergenic | 55.0% |
| GGACCAAAGCTATCAGCCTG+AGG | + | chr8_4:12302246-12302265 | None:intergenic | 55.0% | |
| CCTAGCACCGTAGAGAATCG+TGG | + | chr8_4:12302826-12302845 | None:intergenic | 55.0% | |
| CCACGATTCTCTACGGTGCT+AGG | - | chr8_4:12302823-12302842 | Msa1313990:intron | 55.0% | |
| GAGGATCCAACTTCCCCACA+TGG | - | chr8_4:12302959-12302978 | Msa1313990:intron | 55.0% | |
| CGAATGCCATGTGGGGAAGT+TGG | + | chr8_4:12302968-12302987 | None:intergenic | 55.0% | |
| GTCTCCGGCTCTTAGTTGGT+CGG | + | chr8_4:12303303-12303322 | None:intergenic | 55.0% | |
| GCATCTTCACAGGCCCGTAT+CGG | + | chr8_4:12303609-12303628 | None:intergenic | 55.0% | |
| GACACCGCCACGTGCTTCAT+CGG | - | chr8_4:12298948-12298967 | Msa1313990:three_prime_UTR | 60.0% | |
| !! | AGAAGCGCCGATGAAGCACG+TGG | + | chr8_4:12298958-12298977 | None:intergenic | 60.0% |
| GTGCTTCATCGGCGCTTCTG+TGG | - | chr8_4:12298959-12298978 | Msa1313990:three_prime_UTR | 60.0% | |
| GTCGAATCGGTTGAACCGGC+CGG | + | chr8_4:12299445-12299464 | None:intergenic | 60.0% | |
| ! | CCGGACACAGGTTCGGTTCA+CGG | + | chr8_4:12299467-12299486 | None:intergenic | 60.0% |
| CCGTGAACCGAACCTGTGTC+CGG | - | chr8_4:12299464-12299483 | Msa1313990:CDS | 60.0% | |
| AACCGAACCTGTGTCCGGTC+CGG | - | chr8_4:12299469-12299488 | Msa1313990:CDS | 60.0% | |
| TTCCGGACCGGACACAGGTT+CGG | + | chr8_4:12299474-12299493 | None:intergenic | 60.0% | |
| AACCGGCGTTTGAGCCGGTT+TGG | - | chr8_4:12299558-12299577 | Msa1313990:CDS | 60.0% | |
| ! | ACCGGCGTTTGAGCCGGTTT+GGG | - | chr8_4:12299559-12299578 | Msa1313990:CDS | 60.0% |
| ! | ACCCAAACCGGCTCAAACGC+CGG | + | chr8_4:12299563-12299582 | None:intergenic | 60.0% |
| TCCGGTCCAACCACCCAAAC+CGG | + | chr8_4:12299575-12299594 | None:intergenic | 60.0% | |
| CCTTCCCTTACCCTCGAAGG+GGG | - | chr8_4:12301050-12301069 | Msa1313990:CDS | 60.0% | |
| GTTCTCCCCCTTCGAGGGTA+AGG | + | chr8_4:12301058-12301077 | None:intergenic | 60.0% | |
| TACCCTCGAAGGGGGAGAAC+TGG | - | chr8_4:12301058-12301077 | Msa1313990:CDS | 60.0% | |
| TGCCAGTTCTCCCCCTTCGA+GGG | + | chr8_4:12301063-12301082 | None:intergenic | 60.0% | |
| !! | AGCGCCGATGAAGCACGTGG+CGG | + | chr8_4:12298955-12298974 | None:intergenic | 65.0% |
| TCGGCGCTTCTGTGGCTCTC+AGG | - | chr8_4:12298967-12298986 | Msa1313990:three_prime_UTR | 65.0% | |
| !! | GGCGTTTGAGCCGGTTTGGG+TGG | - | chr8_4:12299562-12299581 | Msa1313990:CDS | 65.0% |
| !! | GCCGGTTTGGGTGGTTGGAC+CGG | - | chr8_4:12299571-12299590 | Msa1313990:CDS | 65.0% |
| CCCCCTTCGAGGGTAAGGGA+AGG | + | chr8_4:12301053-12301072 | None:intergenic | 65.0% | |
| CTGCCAGTTCTCCCCCTTCG+AGG | + | chr8_4:12301064-12301083 | None:intergenic | 65.0% | |
| CTCGAAGGGGGAGAACTGGC+AGG | - | chr8_4:12301062-12301081 | Msa1313990:CDS | 65.0% | |
| CAAAACCGAACCGGGCCGGC+CGG | - | chr8_4:12299427-12299446 | Msa1313990:CDS | 70.0% | |
| TTGAACCGGCCGGCCCGGTT+CGG | + | chr8_4:12299435-12299454 | None:intergenic | 70.0% | |
| ATCGGTTGAACCGGCCGGCC+CGG | + | chr8_4:12299440-12299459 | None:intergenic | 70.0% | |
| GGGAGTTCCGGACCGGACAC+AGG | + | chr8_4:12299479-12299498 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12298732 | 12304035 | 12298732 | ID=Msa1313990;Name=Msa1313990 |
| chr8_4 | mRNA | 12298732 | 12304035 | 12298732 | ID=Msa1313990-mRNA-1;Parent=Msa1313990;Name=Msa1313990-mRNA-1;_AED=0.26;_eAED=0.26;_QI=42|0.87|0.88|1|1|1|9|333|871 |
| chr8_4 | exon | 12298732 | 12299821 | 12298732 | ID=Msa1313990-mRNA-1:exon:4597;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12300045 | 12300308 | 12300045 | ID=Msa1313990-mRNA-1:exon:4596;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12300388 | 12300695 | 12300388 | ID=Msa1313990-mRNA-1:exon:4595;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12300808 | 12300915 | 12300808 | ID=Msa1313990-mRNA-1:exon:4594;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12301031 | 12301116 | 12301031 | ID=Msa1313990-mRNA-1:exon:4593;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12301215 | 12301535 | 12301215 | ID=Msa1313990-mRNA-1:exon:4592;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12301667 | 12301910 | 12301667 | ID=Msa1313990-mRNA-1:exon:4591;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12301999 | 12302285 | 12301999 | ID=Msa1313990-mRNA-1:exon:4590;Parent=Msa1313990-mRNA-1 |
| chr8_4 | exon | 12303753 | 12304035 | 12303753 | ID=Msa1313990-mRNA-1:exon:4589;Parent=Msa1313990-mRNA-1 |
| chr8_4 | five_prime_UTR | 12303994 | 12304035 | 12303994 | ID=Msa1313990-mRNA-1:five_prime_utr;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12303753 | 12303993 | 12303753 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12301999 | 12302285 | 12301999 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12301667 | 12301910 | 12301667 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12301215 | 12301535 | 12301215 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12301031 | 12301116 | 12301031 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12300808 | 12300915 | 12300808 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12300388 | 12300695 | 12300388 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12300045 | 12300308 | 12300045 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | CDS | 12299065 | 12299821 | 12299065 | ID=Msa1313990-mRNA-1:cds;Parent=Msa1313990-mRNA-1 |
| chr8_4 | three_prime_UTR | 12298732 | 12299064 | 12298732 | ID=Msa1313990-mRNA-1:three_prime_utr;Parent=Msa1313990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
