AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1316550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316550 MtrunA17_Chr8g0346711 98.375 677 11 0 1 677 1 677 0.0 1396
Msa1316550 MtrunA17_Chr7g0239061 54.956 686 248 14 24 665 9 677 0.0 702
Msa1316550 MtrunA17_Chr4g0009751 57.692 624 219 12 28 625 18 622 0.0 655
Msa1316550 MtrunA17_Chr2g0276781 52.315 648 269 13 20 649 14 639 0.0 625
Msa1316550 MtrunA17_Chr8g0385791 63.636 363 126 5 10 367 39 400 2.23e-157 474
Msa1316550 MtrunA17_Chr8g0385791 33.808 281 146 9 391 645 532 798 2.06e-28 121
Msa1316550 MtrunA17_Chr5g0433301 48.214 392 187 6 8 394 3 383 9.55e-114 361
Msa1316550 MtrunA17_Chr5g0433301 43.038 79 43 1 569 645 725 803 1.21e-14 77.8
Msa1316550 MtrunA17_Chr3g0109391 49.733 374 172 6 26 394 23 385 1.40e-113 361
Msa1316550 MtrunA17_Chr3g0109391 42.697 89 48 2 559 645 724 811 4.35e-14 75.9
Msa1316550 MtrunA17_Chr2g0285461 52.907 344 157 4 26 364 20 363 2.51e-113 362
Msa1316550 MtrunA17_Chr2g0285461 28.700 223 146 5 425 645 652 863 4.28e-16 82.4
Msa1316550 MtrunA17_Chr8g0376771 52.210 362 166 5 8 364 3 362 3.38e-113 362
Msa1316550 MtrunA17_Chr8g0376771 31.633 196 98 7 463 645 697 869 1.89e-15 80.5
Msa1316550 MtrunA17_Chr2g0326281 48.819 381 164 9 27 379 54 431 1.42e-110 352
Msa1316550 MtrunA17_Chr2g0326281 51.579 95 45 1 558 651 695 789 1.87e-24 108
Msa1316550 MtrunA17_Chr4g0029671 44.878 410 202 9 27 421 52 452 1.68e-108 346
Msa1316550 MtrunA17_Chr4g0029671 55.056 89 39 1 558 645 663 751 1.25e-24 109
Msa1316550 MtrunA17_Chr1g0156321 51.585 347 163 4 16 358 31 376 2.86e-108 347
Msa1316550 MtrunA17_Chr1g0156321 41.748 103 54 3 545 645 744 842 7.13e-16 81.6
Msa1316550 MtrunA17_Chr4g0046371 47.872 376 154 9 29 378 38 397 1.35e-105 336
Msa1316550 MtrunA17_Chr8g0389081 52.149 349 157 7 22 362 24 370 5.81e-102 335
Msa1316550 MtrunA17_Chr8g0389081 46.154 91 46 2 557 645 984 1073 1.44e-18 90.5
Msa1316550 MtrunA17_Chr2g0282961 46.556 363 172 7 29 377 53 407 1.74e-100 320
Msa1316550 MtrunA17_Chr2g0301251 50.888 338 159 5 29 361 23 358 6.36e-98 325
Msa1316550 MtrunA17_Chr2g0301251 44.681 94 49 2 557 648 985 1077 2.69e-18 89.7
Msa1316550 MtrunA17_Chr4g0070181 51.032 339 157 7 29 361 23 358 1.55e-95 318
Msa1316550 MtrunA17_Chr4g0070181 46.154 91 46 2 557 645 993 1082 1.51e-18 90.5
Msa1316550 MtrunA17_Chr4g0028971 30.295 713 371 20 16 646 3 671 8.81e-71 243
Msa1316550 MtrunA17_Chr2g0326761 39.633 381 179 11 21 358 3 375 1.74e-66 231
Msa1316550 MtrunA17_Chr1g0181211 36.567 402 200 8 29 381 27 422 7.28e-64 224
Msa1316550 MtrunA17_Chr1g0199681 37.280 397 197 10 26 379 91 478 9.04e-61 216
Msa1316550 MtrunA17_Chr7g0264171 34.793 411 206 10 23 379 25 427 3.31e-59 210
Msa1316550 MtrunA17_Chr3g0115271 35.128 390 209 9 26 377 16 399 4.63e-56 201
Msa1316550 MtrunA17_Chr5g0417281 36.031 383 199 13 14 380 2 354 6.03e-56 199
Msa1316550 MtrunA17_Chr7g0264161 39.482 309 171 8 38 338 1 301 3.63e-55 190
Msa1316550 MtrunA17_Chr5g0424931 31.797 434 225 13 29 404 19 439 5.80e-54 193
Msa1316550 MtrunA17_Chr8g0356211 43.777 233 119 7 139 366 2 227 1.69e-53 186
Msa1316550 MtrunA17_Chr5g0436761 33.333 345 211 8 29 366 12 344 1.82e-50 182
Msa1316550 MtrunA17_Chr1g0178011 32.653 343 218 8 29 366 12 346 1.60e-47 174
Msa1316550 MtrunA17_Chr2g0289221 36.335 322 173 11 29 338 20 321 2.67e-46 168
Msa1316550 MtrunA17_Chr5g0417211 31.880 367 204 13 29 375 12 352 7.36e-40 151
Msa1316550 MtrunA17_Chr2g0277461 27.692 390 257 8 29 404 13 391 2.53e-38 148
Msa1316550 MtrunA17_Chr5g0424801 29.412 340 218 9 29 360 12 337 1.58e-35 138
Msa1316550 MtrunA17_Chr5g0425661 35.567 194 117 2 29 219 37 225 1.13e-34 132
Msa1316550 MtrunA17_Chr2g0277531 29.299 314 194 9 26 328 17 313 1.98e-34 133
Msa1316550 MtrunA17_Chr5g0425261 29.480 346 221 10 29 365 12 343 2.94e-34 134
Msa1316550 MtrunA17_Chr5g0424741 27.446 368 224 12 29 360 12 372 6.20e-34 136
Msa1316550 MtrunA17_Chr1g0156301 37.838 111 48 4 545 652 167 259 4.25e-12 67.0
Msa1316550 MtrunA17_Chr1g0193861 37.349 83 45 1 561 636 86 168 3.13e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316550 AT4G23980.2 56.260 631 234 14 26 645 9 608 0.0 653
Msa1316550 AT4G23980.1 55.836 634 234 13 26 645 9 610 0.0 652
Msa1316550 AT2G46530.1 53.492 673 232 15 1 668 1 597 0.0 651
Msa1316550 AT2G46530.3 54.434 654 225 14 20 668 33 618 0.0 647
Msa1316550 AT3G61830.1 53.594 640 225 11 23 658 19 590 0.0 634
Msa1316550 AT1G59750.4 49.924 657 284 13 8 648 1 628 0.0 587
Msa1316550 AT1G59750.2 49.772 659 284 13 8 648 1 630 0.0 585
Msa1316550 AT1G59750.1 49.547 662 284 13 8 648 1 633 0.0 585
Msa1316550 AT1G59750.3 49.547 662 284 13 8 648 1 633 0.0 585
Msa1316550 AT3G61830.2 52.554 607 216 11 56 658 1 539 0.0 578
Msa1316550 AT1G35540.1 47.161 634 267 15 26 648 24 600 0.0 541
Msa1316550 AT2G46530.2 52.220 563 197 13 110 668 16 510 2.79e-178 518
Msa1316550 AT1G34410.1 46.338 628 272 14 26 643 24 596 6.17e-175 512
Msa1316550 AT1G34310.1 47.087 618 268 17 26 636 24 589 5.70e-173 507
Msa1316550 AT1G35240.1 45.367 626 267 14 26 643 24 582 2.94e-171 503
Msa1316550 AT1G35520.1 45.177 622 274 12 26 636 24 589 3.57e-171 502
Msa1316550 AT1G34390.1 46.785 622 262 13 26 636 24 587 1.05e-169 499
Msa1316550 AT5G62000.2 64.756 349 112 5 26 367 58 402 1.18e-159 482
Msa1316550 AT5G62000.2 53.846 91 41 1 556 645 731 821 2.29e-25 112
Msa1316550 AT5G62000.5 64.756 349 112 5 26 367 58 402 1.18e-159 482
Msa1316550 AT5G62000.5 53.846 91 41 1 556 645 731 821 2.29e-25 112
Msa1316550 AT5G62000.3 64.756 349 112 5 26 367 58 402 1.18e-159 482
Msa1316550 AT5G62000.3 53.846 91 41 1 556 645 731 821 2.29e-25 112
Msa1316550 AT5G62000.1 64.756 349 112 5 26 367 58 402 1.18e-159 482
Msa1316550 AT5G62000.1 53.846 91 41 1 556 645 731 821 2.29e-25 112
Msa1316550 AT5G62000.4 64.756 349 112 5 26 367 58 402 1.85e-159 481
Msa1316550 AT5G62000.4 53.846 91 41 1 556 645 731 821 2.68e-25 112
Msa1316550 AT1G34170.1 42.292 480 246 12 26 493 22 482 1.39e-122 374
Msa1316550 AT5G37020.2 52.326 344 159 4 26 364 19 362 1.87e-113 359
Msa1316550 AT5G37020.1 52.326 344 159 4 26 364 19 362 4.71e-113 359
Msa1316550 AT5G37020.1 42.529 87 47 2 561 645 708 793 1.84e-13 74.3
Msa1316550 AT5G60450.2 49.454 366 167 8 26 377 38 399 2.05e-110 351
Msa1316550 AT5G60450.2 55.056 89 39 1 556 643 639 727 1.19e-23 107
Msa1316550 AT5G60450.1 49.454 366 167 8 26 377 62 423 3.72e-110 351
Msa1316550 AT5G60450.1 55.056 89 39 1 556 643 663 751 1.28e-23 107
Msa1316550 AT1G30330.1 50.689 363 171 6 8 364 3 363 2.94e-109 352
Msa1316550 AT1G30330.1 39.785 93 53 2 555 645 791 882 1.57e-14 78.2
Msa1316550 AT1G30330.3 51.884 345 159 5 26 364 22 365 5.55e-109 351
Msa1316550 AT1G30330.3 39.785 93 53 2 555 645 793 884 1.67e-14 77.8
Msa1316550 AT1G30330.2 51.884 345 159 5 26 364 22 365 5.55e-109 351
Msa1316550 AT1G30330.2 39.785 93 53 2 555 645 793 884 1.67e-14 77.8
Msa1316550 AT1G34170.2 40.084 479 232 11 26 493 22 456 2.32e-108 337
Msa1316550 AT1G19850.1 50.432 347 165 5 18 358 43 388 8.08e-108 347
Msa1316550 AT1G19850.1 42.105 114 58 5 545 653 782 892 9.54e-16 82.0
Msa1316550 AT1G19850.2 50.432 347 165 5 18 358 32 377 9.66e-108 347
Msa1316550 AT1G19850.2 42.105 114 58 5 545 653 771 881 9.47e-16 82.0
Msa1316550 AT1G34170.3 46.610 354 155 5 26 377 22 343 4.53e-105 330
Msa1316550 AT1G34170.3 64.773 88 31 0 561 648 436 523 5.41e-33 134
Msa1316550 AT2G33860.1 47.674 344 159 7 29 359 54 389 1.59e-100 320
Msa1316550 AT1G19220.1 50.147 339 160 7 29 361 23 358 2.15e-92 310
Msa1316550 AT1G19220.1 48.352 91 44 2 557 645 957 1046 7.11e-20 95.1
Msa1316550 AT5G20730.2 48.148 351 157 7 25 361 20 359 5.67e-91 307
Msa1316550 AT5G20730.2 46.154 91 46 2 557 645 1036 1125 8.99e-19 91.7
Msa1316550 AT5G20730.3 48.011 352 157 7 25 361 20 360 1.18e-90 306
Msa1316550 AT5G20730.3 46.154 91 46 2 557 645 1037 1126 9.41e-19 91.7
Msa1316550 AT5G20730.1 48.011 352 157 7 25 361 20 360 1.40e-90 306
Msa1316550 AT5G20730.1 46.154 91 46 2 557 645 1037 1126 9.15e-19 91.7
Msa1316550 AT5G37020.3 56.790 243 102 2 125 364 25 267 2.94e-84 280
Msa1316550 AT5G37020.3 43.023 86 46 2 562 645 614 698 1.77e-13 74.3
Msa1316550 AT2G33860.2 51.724 232 108 3 131 359 2 232 3.70e-74 246
Msa1316550 AT1G43950.1 55.122 205 86 4 26 230 24 222 7.47e-70 227
Msa1316550 AT4G30080.1 39.378 386 177 11 19 358 9 383 1.35e-65 229
Msa1316550 AT2G28350.2 38.806 402 188 12 29 380 10 403 2.06e-65 228
Msa1316550 AT2G28350.1 38.554 415 192 13 16 380 2 403 2.55e-65 229
Msa1316550 AT1G77850.2 33.780 373 188 11 30 358 20 377 1.72e-49 183
Msa1316550 AT1G77850.1 33.780 373 188 11 30 358 20 377 1.88e-49 182
Msa1316550 AT3G62100.1 36.842 95 52 2 548 636 74 166 1.82e-11 63.5
Msa1316550 AT3G16500.2 35.185 108 51 3 561 649 154 261 2.75e-11 65.1
Msa1316550 AT5G25890.1 35.065 77 50 0 561 637 83 159 4.85e-11 62.4
Msa1316550 AT3G17600.1 38.554 83 47 2 561 640 75 156 7.00e-11 61.6

Find 163 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTGATTGTTGGTTATT+TGG 0.118738 8_4:-17004216 Msa1316550:CDS
ACATTACAACTTCAAAATTA+TGG 0.170359 8_4:-17002802 Msa1316550:three_prime_UTR
CAATTAGAGTACCTTCTTTC+AGG 0.175630 8_4:+17005171 None:intergenic
GTTCGGCAGCACCGGTTAAT+TGG 0.204175 8_4:+17004412 None:intergenic
CTGGCACTATTGTTGGGGTT+GGG 0.225274 8_4:-17004889 Msa1316550:CDS
GAGAAATTATTTGATATTAA+AGG 0.227087 8_4:-17003236 Msa1316550:CDS
CTTGACTTAACCATGTTAAA+TGG 0.228353 8_4:-17003284 Msa1316550:CDS
TGTTGGTTTGAATAAGTATT+TGG 0.232129 8_4:-17005262 Msa1316550:CDS
ACATTCAAATGTGGTGAATT+AGG 0.237390 8_4:+17004333 None:intergenic
GGTAAGGATAATAGATTCTT+TGG 0.239075 8_4:+17004095 None:intergenic
TGGATTCGTTCAGGTTCTTT+TGG 0.240408 8_4:-17007762 Msa1316550:five_prime_UTR
TCCCATGAAGAAACTCTTTC+TGG 0.255185 8_4:+17004703 None:intergenic
ATGCATTTCCCTATCTATAA+TGG 0.270464 8_4:-17002685 Msa1316550:three_prime_UTR
AAGTTACTCTCCATTTGTTT+TGG 0.278406 8_4:+17003201 None:intergenic
AGCTCCTGAGTTGGAGTTGC+TGG 0.281379 8_4:+17006026 None:intergenic
GAGTCTTGGTGGAAGGAATT+TGG 0.281586 8_4:-17004356 Msa1316550:CDS
AATGAGTGAAACTTCTGTTT+TGG 0.282938 8_4:+17006232 None:intergenic
TTTCTTCTGCTGCCCTTTGT+TGG 0.299837 8_4:+17004023 None:intergenic
TTTGGAGAATCAGAAGGATT+TGG 0.313683 8_4:+17006250 None:intergenic
TCTTGTTGAGAACTTCCTCC+TGG 0.315796 8_4:+17007279 None:intergenic
TGGCACTATTGTTGGGGTTG+GGG 0.317435 8_4:-17004888 Msa1316550:CDS
AAGACAACGACATCACTTAA+AGG 0.318312 8_4:-17007727 Msa1316550:five_prime_UTR
TCTCTCTCATGAGTTATTGA+TGG 0.321161 8_4:-17007421 Msa1316550:five_prime_UTR
CACATCTTGAGTGTAATCTA+AGG 0.329674 8_4:-17007305 Msa1316550:CDS
TTTCTCTGTCTTGGGTTTGT+TGG 0.333715 8_4:+17007583 None:intergenic
CATATTTGTTTACAAGCTAA+TGG 0.335674 8_4:+17002705 None:intergenic
GGAAGTTCTCAACAAGAAAA+AGG 0.336508 8_4:-17007273 Msa1316550:intron
ATCTCCGGCCACCAATCTTT+TGG 0.336866 8_4:+17005751 None:intergenic
AGCTTGTTCTGCCATTCATT+TGG 0.341680 8_4:+17003982 None:intergenic
GAAGAAACTCTTTCTGGTCT+TGG 0.342544 8_4:+17004709 None:intergenic
AAATATCTCACATCTGATTC+TGG 0.345650 8_4:+17006445 None:intergenic
TATGAAACAAGAGCAGAAAA+AGG 0.347339 8_4:-17007810 Msa1316550:five_prime_UTR
TCAATCTCTAATGAAGAATT+AGG 0.360719 8_4:+17002954 None:intergenic
ACACACAATCCATTATAGAT+AGG 0.364770 8_4:+17002676 None:intergenic
AAAACTCTGTCACCAGTATT+AGG 0.366460 8_4:+17006901 None:intergenic
AAAGTAGGAGAAGCTATAAA+AGG 0.369002 8_4:+17004673 None:intergenic
TGTTCTTTGTTATTGGTGAA+TGG 0.372470 8_4:-17007328 Msa1316550:exon
TCTGGCACTATTGTTGGGGT+TGG 0.378298 8_4:-17004890 Msa1316550:CDS
TTGGTAACGTGGATTCGTTC+AGG 0.379348 8_4:-17007771 Msa1316550:five_prime_UTR
CTCGTGAGCTTGGGATGATC+CGG 0.387011 8_4:+17004440 None:intergenic
CTTGTTGAGAACTTCCTCCT+GGG 0.389724 8_4:+17007280 None:intergenic
GCGATGTTTGTGTTAGCATA+AGG 0.391550 8_4:+17004300 None:intergenic
ATGAGAATCCTCTTGATTGT+TGG 0.396015 8_4:-17004224 Msa1316550:CDS
TCTATTAGTGGCTACTTTCA+AGG 0.396077 8_4:-17007393 Msa1316550:five_prime_UTR
TTCGGCAGCACCGGTTAATT+GGG 0.399794 8_4:+17004413 None:intergenic
CACTGATCAGGAATTGAATC+AGG 0.404063 8_4:-17006687 Msa1316550:CDS
GCACGCCAAGATGCATGCTT+TGG 0.405641 8_4:+17005460 None:intergenic
ATTGGGTATGCTCGTGAGCT+TGG 0.408537 8_4:+17004430 None:intergenic
TACCTTAGTCCTTGTTCTCA+TGG 0.418020 8_4:+17003945 None:intergenic
ACTCTCCTTGCCTTGGAGTT+CGG 0.421181 8_4:+17004395 None:intergenic
TGAGTCTAGATTCACAGAAT+AGG 0.424499 8_4:-17002920 Msa1316550:CDS
TGTCGTCAATATTCAGTTGT+TGG 0.424519 8_4:-17006624 Msa1316550:intron
GGGGTTGGGGATGTTTCTGC+AGG 0.425128 8_4:-17004875 Msa1316550:CDS
GACCAGAAAGAGTTTCTTCA+TGG 0.425372 8_4:-17004705 Msa1316550:CDS
CTCTCTCATGAGTTATTGAT+GGG 0.426917 8_4:-17007420 Msa1316550:five_prime_UTR
GAGTCTAGATTCACAGAATA+GGG 0.429663 8_4:-17002919 Msa1316550:CDS
TTGATGGGTTAATCTATTAG+TGG 0.430755 8_4:-17007405 Msa1316550:five_prime_UTR
GAAGTTGTGTGCAGGACCTT+TGG 0.431799 8_4:-17006932 Msa1316550:CDS
GCCTTGGAGTTCGGCAGCAC+CGG 0.433432 8_4:+17004404 None:intergenic
TTGTTGGACAGTGAATAGTT+AGG 0.435729 8_4:+17004039 None:intergenic
ATGATTTGTATGAAGAGTTA+TGG 0.440189 8_4:-17006954 Msa1316550:CDS
AATTATGGACTACATGAAGT+TGG 0.443341 8_4:-17002787 Msa1316550:three_prime_UTR
AGGACTAGTCAGTTTATTGT+TGG 0.445609 8_4:-17005279 Msa1316550:CDS
CAATCTGACTCTCCTTGCCT+TGG 0.446520 8_4:+17004388 None:intergenic
CAGTGAAAAGCAAAAGATCT+AGG 0.447954 8_4:-17004633 Msa1316550:CDS
CGATGTTTGTGTTAGCATAA+GGG 0.449060 8_4:+17004301 None:intergenic
TTGGTGGATGTTCCTAATAC+TGG 0.450168 8_4:-17006913 Msa1316550:CDS
TTTCACATGCATTGGTGGTA+AGG 0.453304 8_4:+17004079 None:intergenic
GTAAGGATAATAGATTCTTT+GGG 0.458740 8_4:+17004096 None:intergenic
TTGGGGATGTTTCTGCAGGA+TGG 0.464475 8_4:-17004871 Msa1316550:CDS
ATTTGTCGCATCCAAAAGAT+TGG 0.466204 8_4:-17005762 Msa1316550:CDS
TTCTCACTGGAGATCATTGA+AGG 0.467761 8_4:-17004843 Msa1316550:intron
CTAGCAGCAAAGGATCTTCA+TGG 0.467822 8_4:-17006005 Msa1316550:CDS
TTCAGTTTCACATGCATTGG+TGG 0.470670 8_4:+17004074 None:intergenic
CACGAGCATACCCAATTAAC+CGG 0.472338 8_4:-17004423 Msa1316550:CDS
TTGGGTATGCTCGTGAGCTT+GGG 0.472365 8_4:+17004431 None:intergenic
GTTGTAAGCAAGTGCCTCCT+TGG 0.473074 8_4:+17005797 None:intergenic
GAATCAGAAGGATTTGGATC+AGG 0.474760 8_4:+17006256 None:intergenic
TTAAACATTGTTACTACAAG+TGG 0.477123 8_4:-17004120 Msa1316550:CDS
GGATTTGGATCAGGATCTAC+AGG 0.478045 8_4:+17006265 None:intergenic
TACCGAGTGCTTGCCTCCAT+TGG 0.478046 8_4:-17006143 Msa1316550:intron
AGGCAACAACGTTGGGAAGT+TGG 0.479657 8_4:-17007790 Msa1316550:five_prime_UTR
GCTGCAAGCATCCACTGATC+AGG 0.479756 8_4:-17006699 Msa1316550:CDS
TTAGTCCTTGTTCTCATGGA+TGG 0.481222 8_4:+17003949 None:intergenic
CTGATTCAATTCCTGATCAG+TGG 0.488028 8_4:+17006688 None:intergenic
CTACTTTCCTCAAGGTCACA+TGG 0.489690 8_4:-17006878 Msa1316550:CDS
TGGCTTGATATCACAGATGA+AGG 0.497591 8_4:+17005480 None:intergenic
GTAGTAACAATGTTTAAACT+TGG 0.504684 8_4:+17004126 None:intergenic
CAATGCATGTGAAACTGAAA+AGG 0.505554 8_4:-17004070 Msa1316550:CDS
AGTTACGTTCCCAAAACAAA+TGG 0.506441 8_4:-17003211 Msa1316550:CDS
GACACCAGCAACTCCAACTC+AGG 0.508014 8_4:-17006030 Msa1316550:CDS
CCTTCCGATGTTTCATCTTG+CGG 0.511606 8_4:-17004610 Msa1316550:intron
GGCACTTGCTTACAACCGGC+TGG 0.513461 8_4:-17005790 Msa1316550:CDS
AAGAAGAAGATGAAAGAAGA+AGG 0.518058 8_4:+17007369 None:intergenic
ATTGATGTTACTTACGGCCA+TGG 0.518924 8_4:+17003137 None:intergenic
AGGAGGCACTTGCTTACAAC+CGG 0.519222 8_4:-17005794 Msa1316550:CDS
TAGGAAAACAAAAGCATCTC+CGG 0.521346 8_4:+17005736 None:intergenic
CAGGATGGTCAAATTCTCAC+TGG 0.521550 8_4:-17004856 Msa1316550:CDS
GTTGTGTGCAGGACCTTTGG+TGG 0.521957 8_4:-17006929 Msa1316550:CDS
ATCGTTGTAGGGGAGAGAAC+GGG 0.522255 8_4:-17005551 Msa1316550:intron
AACTCAGGAGCTAGCAGCAA+AGG 0.522935 8_4:-17006015 Msa1316550:CDS
TTTGCTGCTAGCTCCTGAGT+TGG 0.523480 8_4:+17006017 None:intergenic
CACACAATCCATTATAGATA+GGG 0.525697 8_4:+17002677 None:intergenic
GAAAATGACATGATGCTTGT+CGG 0.530219 8_4:-17003167 Msa1316550:CDS
TCAAGCCAAAGCATGCATCT+TGG 0.530849 8_4:-17005465 Msa1316550:CDS
CTGATGCATCACCAAATGAA+TGG 0.532983 8_4:-17003993 Msa1316550:CDS
TTGTTGAGAACTTCCTCCTG+GGG 0.535275 8_4:+17007281 None:intergenic
TGTAAGCTCTAGAGTCTTGG+TGG 0.541018 8_4:-17004367 Msa1316550:CDS
GATTGTAAGCTCTAGAGTCT+TGG 0.542681 8_4:-17004370 Msa1316550:CDS
ATCCATGAGAACAAGGACTA+AGG 0.547818 8_4:-17003947 Msa1316550:intron
GTTTGAGTGACATTCAAAGT+AGG 0.548095 8_4:+17004658 None:intergenic
ACTATTCACTGTCCAACAAA+GGG 0.548112 8_4:-17004035 Msa1316550:CDS
GAGTGTAATCTAAGGGCCCC+AGG 0.550495 8_4:-17007297 Msa1316550:CDS
AAATGAATGGCAGAACAAGC+TGG 0.554989 8_4:-17003980 Msa1316550:CDS
GATCGTTGTAGGGGAGAGAA+CGG 0.555589 8_4:-17005552 Msa1316550:intron
GGCAACTGAGAGTTGGCGTT+AGG 0.557425 8_4:-17005530 Msa1316550:CDS
TGCGACAAATGTACTCCAGC+CGG 0.557664 8_4:+17005775 None:intergenic
TGGTTTGAATAAGTATTTGG+AGG 0.558023 8_4:-17005259 Msa1316550:CDS
TCGCATGTGAGGCCATCGCT+CGG 0.560120 8_4:+17004270 None:intergenic
GTTTGTGTTAGCATAAGGGT+TGG 0.562713 8_4:+17004305 None:intergenic
GAGAGGACTCACCTGAAAGA+AGG 0.565238 8_4:-17005182 Msa1316550:intron
CCAAATAACCAACAATCAAG+AGG 0.566998 8_4:+17004216 None:intergenic
TGTCGCATCCAAAAGATTGG+TGG 0.567249 8_4:-17005759 Msa1316550:CDS
CTGTACCATCCATGAGAACA+AGG 0.567765 8_4:-17003954 Msa1316550:CDS
TGCTGCCGAACTCCAAGGCA+AGG 0.568457 8_4:-17004400 Msa1316550:CDS
AACTATTCACTGTCCAACAA+AGG 0.576812 8_4:-17004036 Msa1316550:CDS
ACCGGTGCTGCCGAACTCCA+AGG 0.581658 8_4:-17004405 Msa1316550:CDS
AGCTCTAGAGTCTTGGTGGA+AGG 0.588538 8_4:-17004363 Msa1316550:CDS
AGGATCTTCATGGATTTGAG+TGG 0.588735 8_4:-17005995 Msa1316550:CDS
CAACGACATCACTTAAAGGA+AGG 0.591081 8_4:-17007723 Msa1316550:five_prime_UTR
TCGTGAGCTTGGGATGATCC+GGG 0.591691 8_4:+17004441 None:intergenic
TACCAATGGAGGCAAGCACT+CGG 0.591772 8_4:+17006141 None:intergenic
GAGAACGGGCAACTGAGAGT+TGG 0.593646 8_4:-17005537 Msa1316550:CDS
ACCAGAAAGAGTTTCTTCAT+GGG 0.596388 8_4:-17004704 Msa1316550:CDS
TTTGAGAAGGTGCAAATGGA+AGG 0.597190 8_4:-17003326 Msa1316550:intron
AAGTTTAAACACATATATAG+AGG 0.597684 8_4:-17005972 Msa1316550:intron
TCGTCGTTTATTACAAACCA+AGG 0.600362 8_4:-17005398 Msa1316550:intron
ACATCTTGAGTGTAATCTAA+GGG 0.603165 8_4:-17007304 Msa1316550:CDS
TGCTTGTCGGTGATGATCCA+TGG 0.605617 8_4:-17003154 Msa1316550:CDS
ACTTGTTCCATGTGACCTTG+AGG 0.607836 8_4:+17006871 None:intergenic
AGATTCAAGATGAGATTCGA+AGG 0.609071 8_4:-17005204 Msa1316550:CDS
GATATCACAGATGAAGGCAT+AGG 0.610881 8_4:+17005486 None:intergenic
GCATCCAAAAGATTGGTGGC+CGG 0.615102 8_4:-17005755 Msa1316550:CDS
GGTAAGAAAATTACCAATGG+AGG 0.617017 8_4:+17006130 None:intergenic
TTGGAAGTTACATTCAAATG+TGG 0.618182 8_4:+17004324 None:intergenic
CAAGATGAGATTCGAAGGAG+AGG 0.618652 8_4:-17005199 Msa1316550:CDS
GAGTTATGGAAGTTGTGTGC+AGG 0.618746 8_4:-17006940 Msa1316550:CDS
TTCGACGGTAAATTGAAATG+TGG 0.618876 8_4:+17006659 None:intergenic
GCATCTGATACTAGCACACA+TGG 0.620237 8_4:-17006193 Msa1316550:CDS
TTCATCATAACCATTTAACA+TGG 0.625773 8_4:+17003274 None:intergenic
TTTGTAATAAACGACGAACA+TGG 0.635651 8_4:+17005404 None:intergenic
CGCACCGCAAGATGAAACAT+CGG 0.637238 8_4:+17004606 None:intergenic
ATCGCATCTAGACCGAGCGA+TGG 0.639085 8_4:-17004282 Msa1316550:CDS
TACTGTGATCAGGTCAACCA+AGG 0.641842 8_4:-17005814 Msa1316550:intron
ACACGGCATAAAATCTTCGA+CGG 0.643988 8_4:+17006644 None:intergenic
CAAATGGAAGGTGTAGCTGT+TGG 0.654600 8_4:-17003314 Msa1316550:CDS
ACAACTGAATATTGACGACA+CGG 0.657736 8_4:+17006627 None:intergenic
CCGCAAGATGAAACATCGGA+AGG 0.675865 8_4:+17004610 None:intergenic
GTATTAGGAACATCCACCAA+AGG 0.686860 8_4:+17006916 None:intergenic
ACGTTGGGAAGTTGGTAACG+TGG 0.694796 8_4:-17007782 Msa1316550:five_prime_UTR
TCTGATACTAGCACACATGG+TGG 0.705702 8_4:-17006190 Msa1316550:CDS
TGTGATCAGGTCAACCAAGG+AGG 0.725688 8_4:-17005811 Msa1316550:intron
TGTAATCTAAGGGCCCCAGG+AGG 0.747523 8_4:-17007294 Msa1316550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAACTACTAAAATA+TGG - chr8_4:17006979-17006998 Msa1316550:intron 10.0%
!!! AATAACCTTTTTTTTTTTTT+TGG - chr8_4:17007796-17007815 Msa1316550:five_prime_UTR 10.0%
!!! ATAACCTTTTTTTTTTTTTT+GGG - chr8_4:17007797-17007816 Msa1316550:five_prime_UTR 10.0%
!! AAAAAAAACATTATAGGATT+TGG + chr8_4:17002987-17003006 None:intergenic 15.0%
!!! TTTTTGTTTATGTATATTGT+AGG - chr8_4:17004482-17004501 Msa1316550:intron 15.0%
!!! GTAATTTATTGCATTTTATT+AGG - chr8_4:17005176-17005195 Msa1316550:intron 15.0%
!!! TTAAAAATTTCACAAACTTT+TGG + chr8_4:17005209-17005228 None:intergenic 15.0%
!!! TTTATACTTTTATTACACTA+AGG + chr8_4:17006634-17006653 None:intergenic 15.0%
!! GAAAAAAAAGAAAATGAAAT+TGG - chr8_4:17006700-17006719 Msa1316550:CDS 15.0%
!! TAAAAAATTGTATATTTGCA+TGG - chr8_4:17007060-17007079 Msa1316550:intron 15.0%
!! TTGTTTATCTATTAATTTCA+AGG + chr8_4:17007104-17007123 None:intergenic 15.0%
!! GAGAAATTATTTGATATTAA+AGG - chr8_4:17007303-17007322 Msa1316550:CDS 15.0%
!!! TCATATTTTATTACTCTCTT+TGG - chr8_4:17003311-17003330 Msa1316550:CDS 20.0%
!!! TATCAAACTTTTTAGTCTTT+TGG - chr8_4:17003797-17003816 Msa1316550:intron 20.0%
!!! ATCAAACTTTTTAGTCTTTT+GGG - chr8_4:17003798-17003817 Msa1316550:intron 20.0%
!!! GATGTTTTTTTTTTGTTTGT+AGG - chr8_4:17004027-17004046 Msa1316550:CDS 20.0%
!! AAGTTTAAACACATATATAG+AGG - chr8_4:17004567-17004586 Msa1316550:intron 20.0%
!!! TTCATAATCAAATTTTCGAA+TGG - chr8_4:17004639-17004658 Msa1316550:CDS 20.0%
!! TAAATATCAACTTACAACAA+AGG + chr8_4:17005602-17005621 None:intergenic 20.0%
!! TGTATACAATTAACAGAAAA+TGG + chr8_4:17005748-17005767 None:intergenic 20.0%
!! CAACATAGATTAAATTCAAA+GGG + chr8_4:17006904-17006923 None:intergenic 20.0%
!! TCAACATAGATTAAATTCAA+AGG + chr8_4:17006905-17006924 None:intergenic 20.0%
!!! GTTTATTTTAGTTCTTATGT+AGG + chr8_4:17006969-17006988 None:intergenic 20.0%
!!! ATCAAAGTTTTTCAAATTCA+AGG + chr8_4:17007162-17007181 None:intergenic 20.0%
!!! TATTTTTCTTGTTTTTGAGA+AGG - chr8_4:17007200-17007219 Msa1316550:intron 20.0%
!! ACATTACAACTTCAAAATTA+TGG - chr8_4:17007737-17007756 Msa1316550:five_prime_UTR 20.0%
! AAAACAACTCTTCAAAAAGT+TGG - chr8_4:17002845-17002864 Msa1316550:three_prime_UTR 25.0%
! CAGTTACACACATAAAAATA+AGG + chr8_4:17003050-17003069 None:intergenic 25.0%
!!! GTTGTTTTGTTCTTTGTTAT+TGG - chr8_4:17003204-17003223 Msa1316550:CDS 25.0%
! AGAAAAAGGTCAATAATTTG+TGG - chr8_4:17003280-17003299 Msa1316550:CDS 25.0%
! TCTATGTTCATAAGGTAAAA+GGG + chr8_4:17003445-17003464 None:intergenic 25.0%
!!! ACTTTTTCAGAAACAAATCA+AGG - chr8_4:17003492-17003511 Msa1316550:intron 25.0%
!!! CTTTTTCAGAAACAAATCAA+GGG - chr8_4:17003493-17003512 Msa1316550:intron 25.0%
!!! TTTTTTTCTTGTGTTTTTGC+AGG - chr8_4:17003551-17003570 Msa1316550:intron 25.0%
!! ATGATTTGTATGAAGAGTTA+TGG - chr8_4:17003585-17003604 Msa1316550:intron 25.0%
! TACAAACTAGAACACAAAAA+TGG + chr8_4:17003732-17003751 None:intergenic 25.0%
! ATATTCCATGTTGAAAAGTT+AGG - chr8_4:17004181-17004200 Msa1316550:CDS 25.0%
! AAAATCAGAGAACGAAAATA+AGG + chr8_4:17004616-17004635 None:intergenic 25.0%
! GCAGAAAAGAAAATTATACA+AGG + chr8_4:17004844-17004863 None:intergenic 25.0%
! AAGATTCATTATCTAAGCTT+TGG - chr8_4:17004955-17004974 Msa1316550:intron 25.0%
!!! TGTTGGTTTGAATAAGTATT+TGG - chr8_4:17005277-17005296 Msa1316550:CDS 25.0%
!! AACAATCATAAGTTTTCTGT+TGG - chr8_4:17005308-17005327 Msa1316550:intron 25.0%
!!! CTGTTTTTAAGTTCAAATGA+GGG - chr8_4:17005541-17005560 Msa1316550:CDS 25.0%
!! GATTATTTGATCAGATTTTC+TGG - chr8_4:17005631-17005650 Msa1316550:intron 25.0%
! CAGAAAATGGAAATAAAGAT+AGG + chr8_4:17005735-17005754 None:intergenic 25.0%
! AATTGTATACATACCATTTG+AGG - chr8_4:17005757-17005776 Msa1316550:CDS 25.0%
!! AAAAGTTTTACATCCTCAAA+TGG + chr8_4:17005773-17005792 None:intergenic 25.0%
! TCATGTTTAGAAAAAGAACT+TGG - chr8_4:17006386-17006405 Msa1316550:intron 25.0%
! GTAGTAACAATGTTTAAACT+TGG + chr8_4:17006416-17006435 None:intergenic 25.0%
! TTAAACATTGTTACTACAAG+TGG - chr8_4:17006419-17006438 Msa1316550:intron 25.0%
! GTAAGGATAATAGATTCTTT+GGG + chr8_4:17006446-17006465 None:intergenic 25.0%
!! AAAGATTCCTTTCACATTTT+AGG - chr8_4:17006659-17006678 Msa1316550:CDS 25.0%
! CCTAGTTTCAAAGAAAATAT+TGG + chr8_4:17006830-17006849 None:intergenic 25.0%
!!! CCAATATTTTCTTTGAAACT+AGG - chr8_4:17006827-17006846 Msa1316550:intron 25.0%
! CAAATAGTCAACATACTATA+GGG + chr8_4:17006934-17006953 None:intergenic 25.0%
! TCAAATAGTCAACATACTAT+AGG + chr8_4:17006935-17006954 None:intergenic 25.0%
!!! TATTTTAGTTCTTATGTAGG+AGG + chr8_4:17006966-17006985 None:intergenic 25.0%
! CAAGGTTTAAATGTGTATTT+AGG + chr8_4:17007086-17007105 None:intergenic 25.0%
! TTCATCATAACCATTTAACA+TGG + chr8_4:17007268-17007287 None:intergenic 25.0%
!! ACAAAGATTGATGTTACTTA+CGG + chr8_4:17007411-17007430 None:intergenic 25.0%
!! GATTTTCATTTGTTCAAATG+AGG - chr8_4:17007536-17007555 Msa1316550:five_prime_UTR 25.0%
! TCAATCTCTAATGAAGAATT+AGG + chr8_4:17007588-17007607 None:intergenic 25.0%
!!! AAACATGTCACCTTTTTTTT+TGG - chr8_4:17007673-17007692 Msa1316550:five_prime_UTR 25.0%
!!! CTTTTTTTTTGGTTTGAGAA+GGG - chr8_4:17007684-17007703 Msa1316550:five_prime_UTR 25.0%
! CCTACCCAAAAAAAAAAAAA+AGG + chr8_4:17007804-17007823 None:intergenic 25.0%
!!! CCTTTTTTTTTTTTTTGGGT+AGG - chr8_4:17007801-17007820 Msa1316550:five_prime_UTR 25.0%
! CATATTTGTTTACAAGCTAA+TGG + chr8_4:17007837-17007856 None:intergenic 25.0%
TATGAAACAAGAGCAGAAAA+AGG - chr8_4:17002729-17002748 Msa1316550:three_prime_UTR 30.0%
!! ACTCTTCAAAAAGTTGGTTT+TGG - chr8_4:17002851-17002870 Msa1316550:three_prime_UTR 30.0%
!!! CAAAAAGTTGGTTTTGGTTT+TGG - chr8_4:17002857-17002876 Msa1316550:three_prime_UTR 30.0%
!!! TGGTTTTTTTTCTCTGTCTT+GGG + chr8_4:17002967-17002986 None:intergenic 30.0%
!!! TTGGTTTTTTTTCTCTGTCT+TGG + chr8_4:17002968-17002987 None:intergenic 30.0%
! GAGAGTTAAATGCATGTTTT+TGG + chr8_4:17003078-17003097 None:intergenic 30.0%
!! TTGATGGGTTAATCTATTAG+TGG - chr8_4:17003134-17003153 Msa1316550:intron 30.0%
AAGAAGAAGATGAAAGAAGA+AGG + chr8_4:17003173-17003192 None:intergenic 30.0%
!! TGTTCTTTGTTATTGGTGAA+TGG - chr8_4:17003211-17003230 Msa1316550:CDS 30.0%
ACATCTTGAGTGTAATCTAA+GGG - chr8_4:17003235-17003254 Msa1316550:CDS 30.0%
! AAAGGTCAATAATTTGTGGT+TGG - chr8_4:17003284-17003303 Msa1316550:CDS 30.0%
CTCTATGTTCATAAGGTAAA+AGG + chr8_4:17003446-17003465 None:intergenic 30.0%
! CTTTTACCTTATGAACATAG+AGG - chr8_4:17003444-17003463 Msa1316550:intron 30.0%
TTTCTTCCTCTATGTTCATA+AGG + chr8_4:17003453-17003472 None:intergenic 30.0%
TGTAATGTAAACACAACAAG+AGG + chr8_4:17003956-17003975 None:intergenic 30.0%
CACAACAAAAAACACATACA+AGG + chr8_4:17003982-17004001 None:intergenic 30.0%
AAATATCTCACATCTGATTC+TGG + chr8_4:17004097-17004116 None:intergenic 30.0%
! AAAAGCCTAACTTTTCAACA+TGG + chr8_4:17004189-17004208 None:intergenic 30.0%
!!! ACTGTTTCTGAAACTAGTTT+TGG - chr8_4:17004219-17004238 Msa1316550:CDS 30.0%
!!! AAACTAGTTTTGGTTTCTCT+TGG - chr8_4:17004229-17004248 Msa1316550:CDS 30.0%
! AATGAGTGAAACTTCTGTTT+TGG + chr8_4:17004310-17004329 None:intergenic 30.0%
TAGCATCATACAAAGAAACT+CGG + chr8_4:17004433-17004452 None:intergenic 30.0%
AAGGAAAACTTGAATACCTT+AGG + chr8_4:17004825-17004844 None:intergenic 30.0%
TGCTTTCGATGTTATATAGT+TGG - chr8_4:17004861-17004880 Msa1316550:CDS 30.0%
!! GGAGATTTGTTAGATATAGT+TGG - chr8_4:17004882-17004901 Msa1316550:CDS 30.0%
TTTGTAATAAACGACGAACA+TGG + chr8_4:17005138-17005157 None:intergenic 30.0%
ATTACAAAAACTACGAACCT+TGG + chr8_4:17005161-17005180 None:intergenic 30.0%
TGGTTTGAATAAGTATTTGG+AGG - chr8_4:17005280-17005299 Msa1316550:CDS 30.0%
TAAACACTTAAGAGACTGTT+TGG + chr8_4:17005518-17005537 None:intergenic 30.0%
CCTCATTTGAACTTAAAAAC+AGG + chr8_4:17005543-17005562 None:intergenic 30.0%
!!! CCTGTTTTTAAGTTCAAATG+AGG - chr8_4:17005540-17005559 Msa1316550:CDS 30.0%
!! TGTAAAACTTTTTGCCACTT+AGG - chr8_4:17005781-17005800 Msa1316550:CDS 30.0%
AAAGTAGGAGAAGCTATAAA+AGG + chr8_4:17005869-17005888 None:intergenic 30.0%
! TTAGTATTTTCTCGTTCATC+TGG - chr8_4:17006034-17006053 Msa1316550:CDS 30.0%
! TAGTATTTTCTCGTTCATCT+GGG - chr8_4:17006035-17006054 Msa1316550:CDS 30.0%
ACATTCAAATGTGGTGAATT+AGG + chr8_4:17006209-17006228 None:intergenic 30.0%
TTGGAAGTTACATTCAAATG+TGG + chr8_4:17006218-17006237 None:intergenic 30.0%
GGTAAGGATAATAGATTCTT+TGG + chr8_4:17006447-17006466 None:intergenic 30.0%
CATTGACCTCATTTATTCAA+AGG + chr8_4:17006730-17006749 None:intergenic 30.0%
CTTTGAATAAATGAGGTCAA+TGG - chr8_4:17006728-17006747 Msa1316550:intron 30.0%
CACTTTGAACTAAATTGTGA+AGG + chr8_4:17006802-17006821 None:intergenic 30.0%
CTTGACTTAACCATGTTAAA+TGG - chr8_4:17007255-17007274 Msa1316550:intron 30.0%
!! AGTTACTCTCCATTTGTTTT+GGG + chr8_4:17007340-17007359 None:intergenic 30.0%
! AAGTTACTCTCCATTTGTTT+TGG + chr8_4:17007341-17007360 None:intergenic 30.0%
!! TGCCATATTTTTATACATGC+AGG - chr8_4:17007490-17007509 Msa1316550:five_prime_UTR 30.0%
!! GCCATATTTTTATACATGCA+GGG - chr8_4:17007491-17007510 Msa1316550:five_prime_UTR 30.0%
TCCCTGCATGTATAAAAATA+TGG + chr8_4:17007495-17007514 None:intergenic 30.0%
CCTTCTCAAACCAAAAAAAA+AGG + chr8_4:17007686-17007705 None:intergenic 30.0%
!!! CCTTTTTTTTTGGTTTGAGA+AGG - chr8_4:17007683-17007702 Msa1316550:five_prime_UTR 30.0%
!! AAATGGAGTGCTTGATTTTA+TGG - chr8_4:17007707-17007726 Msa1316550:five_prime_UTR 30.0%
! AATTATGGACTACATGAAGT+TGG - chr8_4:17007752-17007771 Msa1316550:five_prime_UTR 30.0%
! ACTACATGAAGTTGGATTTT+AGG - chr8_4:17007760-17007779 Msa1316550:five_prime_UTR 30.0%
ATGCATTTCCCTATCTATAA+TGG - chr8_4:17007854-17007873 Msa1316550:five_prime_UTR 30.0%
CACACAATCCATTATAGATA+GGG + chr8_4:17007865-17007884 None:intergenic 30.0%
ACACACAATCCATTATAGAT+AGG + chr8_4:17007866-17007885 None:intergenic 30.0%
AAGACAACGACATCACTTAA+AGG - chr8_4:17002812-17002831 Msa1316550:three_prime_UTR 35.0%
TCTCTCTCATGAGTTATTGA+TGG - chr8_4:17003118-17003137 Msa1316550:intron 35.0%
CTCTCTCATGAGTTATTGAT+GGG - chr8_4:17003119-17003138 Msa1316550:intron 35.0%
! TCTATTAGTGGCTACTTTCA+AGG - chr8_4:17003146-17003165 Msa1316550:intron 35.0%
CACATCTTGAGTGTAATCTA+AGG - chr8_4:17003234-17003253 Msa1316550:CDS 35.0%
GGAAGTTCTCAACAAGAAAA+AGG - chr8_4:17003266-17003285 Msa1316550:CDS 35.0%
AAAACTCTGTCACCAGTATT+AGG + chr8_4:17003641-17003660 None:intergenic 35.0%
! AGAGTTTTCTACTTTCCTCA+AGG - chr8_4:17003653-17003672 Msa1316550:intron 35.0%
TTCGACGGTAAATTGAAATG+TGG + chr8_4:17003883-17003902 None:intergenic 35.0%
ACAACTGAATATTGACGACA+CGG + chr8_4:17003915-17003934 None:intergenic 35.0%
TGTCGTCAATATTCAGTTGT+TGG - chr8_4:17003915-17003934 Msa1316550:intron 35.0%
TTTGGAGAATCAGAAGGATT+TGG + chr8_4:17004292-17004311 None:intergenic 35.0%
!!! TTCTGTTTTGGAGAATCAGA+AGG + chr8_4:17004298-17004317 None:intergenic 35.0%
GGTAAGAAAATTACCAATGG+AGG + chr8_4:17004412-17004431 None:intergenic 35.0%
CTCGGTAAGAAAATTACCAA+TGG + chr8_4:17004415-17004434 None:intergenic 35.0%
GATTTGCATTGAATGAGAAG+TGG - chr8_4:17004673-17004692 Msa1316550:CDS 35.0%
ATTTGTCGCATCCAAAAGAT+TGG - chr8_4:17004777-17004796 Msa1316550:intron 35.0%
!! TAGGAAAACAAAAGCATCTC+CGG + chr8_4:17004806-17004825 None:intergenic 35.0%
!!! GAGATGCTTTTGTTTTCCTA+AGG - chr8_4:17004806-17004825 Msa1316550:intron 35.0%
TCGTCGTTTATTACAAACCA+AGG - chr8_4:17005141-17005160 Msa1316550:intron 35.0%
! ACATGTCTTTTGATCCATTC+AGG - chr8_4:17005240-17005259 Msa1316550:CDS 35.0%
! ATAAACTGACTAGTCCTGAA+TGG + chr8_4:17005257-17005276 None:intergenic 35.0%
!! AGGACTAGTCAGTTTATTGT+TGG - chr8_4:17005260-17005279 Msa1316550:CDS 35.0%
AGATTCAAGATGAGATTCGA+AGG - chr8_4:17005335-17005354 Msa1316550:intron 35.0%
! CAATTAGAGTACCTTCTTTC+AGG + chr8_4:17005371-17005390 None:intergenic 35.0%
!! CTGAAAGAAGGTACTCTAAT+TGG - chr8_4:17005369-17005388 Msa1316550:intron 35.0%
TCAAATGAGGGAATCTAAAC+AGG - chr8_4:17005553-17005572 Msa1316550:intron 35.0%
ATCTAAACAGGCCATTATTG+TGG - chr8_4:17005565-17005584 Msa1316550:intron 35.0%
TTGCATTCTGACCACAATAA+TGG + chr8_4:17005579-17005598 None:intergenic 35.0%
!! AGATTTTCTGGCACTATTGT+TGG - chr8_4:17005643-17005662 Msa1316550:intron 35.0%
!! GATTTTCTGGCACTATTGTT+GGG - chr8_4:17005644-17005663 Msa1316550:intron 35.0%
!! ATTTTCTGGCACTATTGTTG+GGG - chr8_4:17005645-17005664 Msa1316550:intron 35.0%
!! TTTTTGCCACTTAGGTTCAA+TGG - chr8_4:17005789-17005808 Msa1316550:CDS 35.0%
!! TTTTGCCACTTAGGTTCAAT+GGG - chr8_4:17005790-17005809 Msa1316550:CDS 35.0%
ACCAGAAAGAGTTTCTTCAT+GGG - chr8_4:17005835-17005854 Msa1316550:intron 35.0%
GTTTGAGTGACATTCAAAGT+AGG + chr8_4:17005884-17005903 None:intergenic 35.0%
CAGTGAAAAGCAAAAGATCT+AGG - chr8_4:17005906-17005925 Msa1316550:intron 35.0%
CAAAAACCTGAAGCAGTTAT+AGG + chr8_4:17006074-17006093 None:intergenic 35.0%
!! CTATAACTGCTTCAGGTTTT+TGG - chr8_4:17006072-17006091 Msa1316550:intron 35.0%
CGATGTTTGTGTTAGCATAA+GGG + chr8_4:17006241-17006260 None:intergenic 35.0%
ATGAGAATCCTCTTGATTGT+TGG - chr8_4:17006315-17006334 Msa1316550:intron 35.0%
CCAAATAACCAACAATCAAG+AGG + chr8_4:17006326-17006345 None:intergenic 35.0%
! CCTCTTGATTGTTGGTTATT+TGG - chr8_4:17006323-17006342 Msa1316550:intron 35.0%
! CTTTTCAGTTTCACATGCAT+TGG + chr8_4:17006471-17006490 None:intergenic 35.0%
CAATGCATGTGAAACTGAAA+AGG - chr8_4:17006469-17006488 Msa1316550:CDS 35.0%
TTGTTGGACAGTGAATAGTT+AGG + chr8_4:17006503-17006522 None:intergenic 35.0%
AACTATTCACTGTCCAACAA+AGG - chr8_4:17006503-17006522 Msa1316550:intron 35.0%
ACTATTCACTGTCCAACAAA+GGG - chr8_4:17006504-17006523 Msa1316550:intron 35.0%
! GATTCCTTTCACATTTTAGG+AGG - chr8_4:17006662-17006681 Msa1316550:CDS 35.0%
CTTACCTCCTAAAATGTGAA+AGG + chr8_4:17006669-17006688 None:intergenic 35.0%
GGTTGTCCTTTGAATAAATG+AGG - chr8_4:17006721-17006740 Msa1316550:intron 35.0%
GAATAAATGAGGTCAATGGT+TGG - chr8_4:17006732-17006751 Msa1316550:intron 35.0%
!! TGTTTTTGAGAAGGTGCAAA+TGG - chr8_4:17007209-17007228 Msa1316550:intron 35.0%
AGTTACGTTCCCAAAACAAA+TGG - chr8_4:17007328-17007347 Msa1316550:exon 35.0%
GAAAATGACATGATGCTTGT+CGG - chr8_4:17007372-17007391 Msa1316550:five_prime_UTR 35.0%
TGAGTCTAGATTCACAGAAT+AGG - chr8_4:17007619-17007638 Msa1316550:five_prime_UTR 35.0%
GAGTCTAGATTCACAGAATA+GGG - chr8_4:17007620-17007639 Msa1316550:five_prime_UTR 35.0%
!!! TTTTGGTTTGAGAAGGGAAA+TGG - chr8_4:17007690-17007709 Msa1316550:five_prime_UTR 35.0%
CAGAAAAAGGCAACAACGTT+GGG - chr8_4:17002742-17002761 Msa1316550:three_prime_UTR 40.0%
!! TGGATTCGTTCAGGTTCTTT+TGG - chr8_4:17002777-17002796 Msa1316550:three_prime_UTR 40.0%
!! GGATTCGTTCAGGTTCTTTT+GGG - chr8_4:17002778-17002797 Msa1316550:three_prime_UTR 40.0%
CAACGACATCACTTAAAGGA+AGG - chr8_4:17002816-17002835 Msa1316550:three_prime_UTR 40.0%
TTTCTCTGTCTTGGGTTTGT+TGG + chr8_4:17002959-17002978 None:intergenic 40.0%
GTATTAGGAACATCCACCAA+AGG + chr8_4:17003626-17003645 None:intergenic 40.0%
! TTGGTGGATGTTCCTAATAC+TGG - chr8_4:17003626-17003645 Msa1316550:intron 40.0%
CTGATTCAATTCCTGATCAG+TGG + chr8_4:17003854-17003873 None:intergenic 40.0%
CACTGATCAGGAATTGAATC+AGG - chr8_4:17003852-17003871 Msa1316550:intron 40.0%
ACACGGCATAAAATCTTCGA+CGG + chr8_4:17003898-17003917 None:intergenic 40.0%
!!! CTAGTTTTGGTTTCTCTTGG+TGG - chr8_4:17004232-17004251 Msa1316550:CDS 40.0%
GAATCAGAAGGATTTGGATC+AGG + chr8_4:17004286-17004305 None:intergenic 40.0%
AGGATCTTCATGGATTTGAG+TGG - chr8_4:17004544-17004563 Msa1316550:intron 40.0%
! GTCTTGACTTGATCGTTGTA+GGG - chr8_4:17004977-17004996 Msa1316550:intron 40.0%
! TCTTGACTTGATCGTTGTAG+GGG - chr8_4:17004978-17004997 Msa1316550:intron 40.0%
! GATATCACAGATGAAGGCAT+AGG + chr8_4:17005056-17005075 None:intergenic 40.0%
TGGCTTGATATCACAGATGA+AGG + chr8_4:17005062-17005081 None:intergenic 40.0%
TTCTCACTGGAGATCATTGA+AGG - chr8_4:17005696-17005715 Msa1316550:intron 40.0%
TTCATCCCATTGAACCTAAG+TGG + chr8_4:17005798-17005817 None:intergenic 40.0%
! GAAGAAACTCTTTCTGGTCT+TGG + chr8_4:17005833-17005852 None:intergenic 40.0%
GACCAGAAAGAGTTTCTTCA+TGG - chr8_4:17005834-17005853 Msa1316550:intron 40.0%
TCCCATGAAGAAACTCTTTC+TGG + chr8_4:17005839-17005858 None:intergenic 40.0%
ATCGATCCTATAACTGCTTC+AGG - chr8_4:17006065-17006084 Msa1316550:intron 40.0%
!! GATTGTAAGCTCTAGAGTCT+TGG - chr8_4:17006169-17006188 Msa1316550:CDS 40.0%
GTTTGTGTTAGCATAAGGGT+TGG + chr8_4:17006237-17006256 None:intergenic 40.0%
GCGATGTTTGTGTTAGCATA+AGG + chr8_4:17006242-17006261 None:intergenic 40.0%
!! TCTTTTTCGCGTCTTCTACT+CGG + chr8_4:17006295-17006314 None:intergenic 40.0%
! TTTCACATGCATTGGTGGTA+AGG + chr8_4:17006463-17006482 None:intergenic 40.0%
TTCAGTTTCACATGCATTGG+TGG + chr8_4:17006468-17006487 None:intergenic 40.0%
CTGATGCATCACCAAATGAA+TGG - chr8_4:17006546-17006565 Msa1316550:intron 40.0%
! AGCTTGTTCTGCCATTCATT+TGG + chr8_4:17006560-17006579 None:intergenic 40.0%
AAATGAATGGCAGAACAAGC+TGG - chr8_4:17006559-17006578 Msa1316550:intron 40.0%
TTAGTCCTTGTTCTCATGGA+TGG + chr8_4:17006593-17006612 None:intergenic 40.0%
ATCCATGAGAACAAGGACTA+AGG - chr8_4:17006592-17006611 Msa1316550:intron 40.0%
TACCTTAGTCCTTGTTCTCA+TGG + chr8_4:17006597-17006616 None:intergenic 40.0%
! GTCAATGGTTGGTACTATGT+AGG - chr8_4:17006743-17006762 Msa1316550:intron 40.0%
! TTTGAGAAGGTGCAAATGGA+AGG - chr8_4:17007213-17007232 Msa1316550:intron 40.0%
! ATTGATGTTACTTACGGCCA+TGG + chr8_4:17007405-17007424 None:intergenic 40.0%
! ATGCAGGGAATTTTGCAACA+TGG - chr8_4:17007506-17007525 Msa1316550:five_prime_UTR 40.0%
GCAGAAAAAGGCAACAACGT+TGG - chr8_4:17002741-17002760 Msa1316550:three_prime_UTR 45.0%
!! TTGGTAACGTGGATTCGTTC+AGG - chr8_4:17002768-17002787 Msa1316550:three_prime_UTR 45.0%
TTGTTGAGAACTTCCTCCTG+GGG + chr8_4:17003261-17003280 None:intergenic 45.0%
CTTGTTGAGAACTTCCTCCT+GGG + chr8_4:17003262-17003281 None:intergenic 45.0%
TCTTGTTGAGAACTTCCTCC+TGG + chr8_4:17003263-17003282 None:intergenic 45.0%
GAGTTATGGAAGTTGTGTGC+AGG - chr8_4:17003599-17003618 Msa1316550:intron 45.0%
CTACTTTCCTCAAGGTCACA+TGG - chr8_4:17003661-17003680 Msa1316550:intron 45.0%
ACTTGTTCCATGTGACCTTG+AGG + chr8_4:17003671-17003690 None:intergenic 45.0%
GGATTTGGATCAGGATCTAC+AGG + chr8_4:17004277-17004296 None:intergenic 45.0%
GCATCTGATACTAGCACACA+TGG - chr8_4:17004346-17004365 Msa1316550:CDS 45.0%
TCTGATACTAGCACACATGG+TGG - chr8_4:17004349-17004368 Msa1316550:CDS 45.0%
CTAGCAGCAAAGGATCTTCA+TGG - chr8_4:17004534-17004553 Msa1316550:intron 45.0%
! ACCTGATCACAGTAGTGGAA+GGG + chr8_4:17004719-17004738 None:intergenic 45.0%
TACTGTGATCAGGTCAACCA+AGG - chr8_4:17004725-17004744 Msa1316550:CDS 45.0%
TGTCGCATCCAAAAGATTGG+TGG - chr8_4:17004780-17004799 Msa1316550:intron 45.0%
! GGTCTTGACTTGATCGTTGT+AGG - chr8_4:17004976-17004995 Msa1316550:intron 45.0%
TCAAGCCAAAGCATGCATCT+TGG - chr8_4:17005074-17005093 Msa1316550:intron 45.0%
CAAGATGAGATTCGAAGGAG+AGG - chr8_4:17005340-17005359 Msa1316550:intron 45.0%
CAGGATGGTCAAATTCTCAC+TGG - chr8_4:17005683-17005702 Msa1316550:intron 45.0%
CCTTCCGATGTTTCATCTTG+CGG - chr8_4:17005929-17005948 Msa1316550:intron 45.0%
!!! GCTTCAGGTTTTTGGTATCC+CGG - chr8_4:17006080-17006099 Msa1316550:intron 45.0%
CACGAGCATACCCAATTAAC+CGG - chr8_4:17006116-17006135 Msa1316550:intron 45.0%
!! TGTAAGCTCTAGAGTCTTGG+TGG - chr8_4:17006172-17006191 Msa1316550:CDS 45.0%
GAGTCTTGGTGGAAGGAATT+TGG - chr8_4:17006183-17006202 Msa1316550:CDS 45.0%
TTTCTTCTGCTGCCCTTTGT+TGG + chr8_4:17006519-17006538 None:intergenic 45.0%
CTGTACCATCCATGAGAACA+AGG - chr8_4:17006585-17006604 Msa1316550:intron 45.0%
! CAAATGGAAGGTGTAGCTGT+TGG - chr8_4:17007225-17007244 Msa1316550:intron 45.0%
!! AAAAAAAAAAAAAACATTAT+AGG + chr8_4:17002993-17003012 None:intergenic 5.0%
!!! ATATACAATTTTTTATTTTT+AGG + chr8_4:17007055-17007074 None:intergenic 5.0%
!!! TTGAAATATTAATAATTTTA+TGG + chr8_4:17007133-17007152 None:intergenic 5.0%
!! AAATTATTAATATTTCAAAA+TGG - chr8_4:17007135-17007154 Msa1316550:intron 5.0%
AGGCAACAACGTTGGGAAGT+TGG - chr8_4:17002749-17002768 Msa1316550:three_prime_UTR 50.0%
!! ACGTTGGGAAGTTGGTAACG+TGG - chr8_4:17002757-17002776 Msa1316550:three_prime_UTR 50.0%
GAAGTTGTGTGCAGGACCTT+TGG - chr8_4:17003607-17003626 Msa1316550:intron 50.0%
TACCAATGGAGGCAAGCACT+CGG + chr8_4:17004401-17004420 None:intergenic 50.0%
TTTGCTGCTAGCTCCTGAGT+TGG + chr8_4:17004525-17004544 None:intergenic 50.0%
AACTCAGGAGCTAGCAGCAA+AGG - chr8_4:17004524-17004543 Msa1316550:intron 50.0%
TCCCTTCCACTACTGTGATC+AGG - chr8_4:17004715-17004734 Msa1316550:CDS 50.0%
! GACCTGATCACAGTAGTGGA+AGG + chr8_4:17004720-17004739 None:intergenic 50.0%
GGTTGACCTGATCACAGTAG+TGG + chr8_4:17004724-17004743 None:intergenic 50.0%
TGTGATCAGGTCAACCAAGG+AGG - chr8_4:17004728-17004747 Msa1316550:CDS 50.0%
GTTGTAAGCAAGTGCCTCCT+TGG + chr8_4:17004745-17004764 None:intergenic 50.0%
!! AGGAGGCACTTGCTTACAAC+CGG - chr8_4:17004745-17004764 Msa1316550:intron 50.0%
TGCGACAAATGTACTCCAGC+CGG + chr8_4:17004767-17004786 None:intergenic 50.0%
! GCATCCAAAAGATTGGTGGC+CGG - chr8_4:17004784-17004803 Msa1316550:intron 50.0%
! ATCTCCGGCCACCAATCTTT+TGG + chr8_4:17004791-17004810 None:intergenic 50.0%
GATCGTTGTAGGGGAGAGAA+CGG - chr8_4:17004987-17005006 Msa1316550:intron 50.0%
ATCGTTGTAGGGGAGAGAAC+GGG - chr8_4:17004988-17005007 Msa1316550:intron 50.0%
GAGAGGACTCACCTGAAAGA+AGG - chr8_4:17005357-17005376 Msa1316550:intron 50.0%
TCTGGCACTATTGTTGGGGT+TGG - chr8_4:17005649-17005668 Msa1316550:intron 50.0%
CTGGCACTATTGTTGGGGTT+GGG - chr8_4:17005650-17005669 Msa1316550:intron 50.0%
TGGCACTATTGTTGGGGTTG+GGG - chr8_4:17005651-17005670 Msa1316550:intron 50.0%
! TTGGGGATGTTTCTGCAGGA+TGG - chr8_4:17005668-17005687 Msa1316550:intron 50.0%
CCGCAAGATGAAACATCGGA+AGG + chr8_4:17005932-17005951 None:intergenic 50.0%
CGCACCGCAAGATGAAACAT+CGG + chr8_4:17005936-17005955 None:intergenic 50.0%
TTGGGTATGCTCGTGAGCTT+GGG + chr8_4:17006111-17006130 None:intergenic 50.0%
ATTGGGTATGCTCGTGAGCT+TGG + chr8_4:17006112-17006131 None:intergenic 50.0%
ACTCTCCTTGCCTTGGAGTT+CGG + chr8_4:17006147-17006166 None:intergenic 50.0%
CAATCTGACTCTCCTTGCCT+TGG + chr8_4:17006154-17006173 None:intergenic 50.0%
!! AGCTCTAGAGTCTTGGTGGA+AGG - chr8_4:17006176-17006195 Msa1316550:CDS 50.0%
TGCTTGTCGGTGATGATCCA+TGG - chr8_4:17007385-17007404 Msa1316550:five_prime_UTR 50.0%
GAGTGTAATCTAAGGGCCCC+AGG - chr8_4:17003242-17003261 Msa1316550:CDS 55.0%
TGTAATCTAAGGGCCCCAGG+AGG - chr8_4:17003245-17003264 Msa1316550:CDS 55.0%
GTTGTGTGCAGGACCTTTGG+TGG - chr8_4:17003610-17003629 Msa1316550:intron 55.0%
GCTGCAAGCATCCACTGATC+AGG - chr8_4:17003840-17003859 Msa1316550:intron 55.0%
TACCGAGTGCTTGCCTCCAT+TGG - chr8_4:17004396-17004415 Msa1316550:CDS 55.0%
GACACCAGCAACTCCAACTC+AGG - chr8_4:17004509-17004528 Msa1316550:intron 55.0%
! AGCTCCTGAGTTGGAGTTGC+TGG + chr8_4:17004516-17004535 None:intergenic 55.0%
GAGAACGGGCAACTGAGAGT+TGG - chr8_4:17005002-17005021 Msa1316550:intron 55.0%
GGCAACTGAGAGTTGGCGTT+AGG - chr8_4:17005009-17005028 Msa1316550:intron 55.0%
GCACGCCAAGATGCATGCTT+TGG + chr8_4:17005082-17005101 None:intergenic 55.0%
TCGTGAGCTTGGGATGATCC+GGG + chr8_4:17006101-17006120 None:intergenic 55.0%
CTCGTGAGCTTGGGATGATC+CGG + chr8_4:17006102-17006121 None:intergenic 55.0%
ATCGCATCTAGACCGAGCGA+TGG - chr8_4:17006257-17006276 Msa1316550:CDS 55.0%
CTTCTACTCGGTCGCATGTG+AGG + chr8_4:17006283-17006302 None:intergenic 55.0%
GGCACTTGCTTACAACCGGC+TGG - chr8_4:17004749-17004768 Msa1316550:intron 60.0%
! GGGGTTGGGGATGTTTCTGC+AGG - chr8_4:17005664-17005683 Msa1316550:intron 60.0%
TCGCATGTGAGGCCATCGCT+CGG + chr8_4:17006272-17006291 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 17002640 17007921 17002640 ID=Msa1316550;Name=Msa1316550
chr8_4 mRNA 17002640 17007921 17002640 ID=Msa1316550-mRNA-1;Parent=Msa1316550;Name=Msa1316550-mRNA-1;_AED=0.10;_eAED=0.10;_QI=590|1|1|1|1|1|14|250|677
chr8_4 exon 17002640 17003049 17002640 ID=Msa1316550-mRNA-1:exon:6337;Parent=Msa1316550-mRNA-1
chr8_4 exon 17003152 17003339 17003152 ID=Msa1316550-mRNA-1:exon:6336;Parent=Msa1316550-mRNA-1
chr8_4 exon 17003948 17004474 17003948 ID=Msa1316550-mRNA-1:exon:6335;Parent=Msa1316550-mRNA-1
chr8_4 exon 17004611 17004758 17004611 ID=Msa1316550-mRNA-1:exon:6334;Parent=Msa1316550-mRNA-1
chr8_4 exon 17004844 17004916 17004844 ID=Msa1316550-mRNA-1:exon:6333;Parent=Msa1316550-mRNA-1
chr8_4 exon 17005183 17005299 17005183 ID=Msa1316550-mRNA-1:exon:6332;Parent=Msa1316550-mRNA-1
chr8_4 exon 17005399 17005563 17005399 ID=Msa1316550-mRNA-1:exon:6331;Parent=Msa1316550-mRNA-1
chr8_4 exon 17005734 17005824 17005734 ID=Msa1316550-mRNA-1:exon:6330;Parent=Msa1316550-mRNA-1
chr8_4 exon 17005973 17006057 17005973 ID=Msa1316550-mRNA-1:exon:6329;Parent=Msa1316550-mRNA-1
chr8_4 exon 17006144 17006296 17006144 ID=Msa1316550-mRNA-1:exon:6328;Parent=Msa1316550-mRNA-1
chr8_4 exon 17006456 17006512 17006456 ID=Msa1316550-mRNA-1:exon:6327;Parent=Msa1316550-mRNA-1
chr8_4 exon 17006625 17006720 17006625 ID=Msa1316550-mRNA-1:exon:6326;Parent=Msa1316550-mRNA-1
chr8_4 exon 17006873 17006988 17006873 ID=Msa1316550-mRNA-1:exon:6325;Parent=Msa1316550-mRNA-1
chr8_4 exon 17007274 17007921 17007274 ID=Msa1316550-mRNA-1:exon:6324;Parent=Msa1316550-mRNA-1
chr8_4 five_prime_UTR 17007332 17007921 17007332 ID=Msa1316550-mRNA-1:five_prime_utr;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17007274 17007331 17007274 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17006873 17006988 17006873 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17006625 17006720 17006625 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17006456 17006512 17006456 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17006144 17006296 17006144 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17005973 17006057 17005973 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17005734 17005824 17005734 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17005399 17005563 17005399 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17005183 17005299 17005183 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17004844 17004916 17004844 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17004611 17004758 17004611 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17003948 17004474 17003948 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17003152 17003339 17003152 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 CDS 17002890 17003049 17002890 ID=Msa1316550-mRNA-1:cds;Parent=Msa1316550-mRNA-1
chr8_4 three_prime_UTR 17002640 17002889 17002640 ID=Msa1316550-mRNA-1:three_prime_utr;Parent=Msa1316550-mRNA-1
Gene Sequence

>Msa1316550

ATGGCACATCTTGAGTGTAATCTAAGGGCCCCAGGAGGAAGTTCTCAACAAGAAAAAGGTGTTAAAAATGATGATTTGTATGAAGAGTTATGGAAGTTGTGTGCAGGACCTTTGGTGGATGTTCCTAATACTGGTGACAGAGTTTTCTACTTTCCTCAAGGTCACATGGAACAACTGCAAGCATCCACTGATCAGGAATTGAATCAGGAAATTCCACATTTCAATTTACCGTCGAAGATTTTATGCCGTGTCGTCAATATTCAGTTGTTGGCTGAGCAAGAAACTGATGAGATTTATGCTTGTGTTGCTTTGCTTCCAGAATCAGATCAAACTGAGCCTGTAGATCCTGATCCAAATCCTTCTGATTCTCCAAAACAGAAGTTTCACTCATTTTGCAAAATATTAACTGCATCTGATACTAGCACACATGGTGGATTTTCAGTTCTTAGAAAGCATGCTACCGAGTGCTTGCCTCCATTGGACATGACACCAGCAACTCCAACTCAGGAGCTAGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAACACATATATAGAGGTCAACCAAGGAGGCACTTGCTTACAACCGGCTGGAGTACATTTGTCGCATCCAAAAGATTGGTGGCCGGAGATGCTTTTGTTTTCCTAAGGGGAGAGAACGGGCAACTGAGAGTTGGCGTTAGGCGTATAGCTAAGCAGCACAGTCCTATGCCTTCATCTGTGATATCAAGCCAAAGCATGCATCTTGGCGTGCTTGCTACTGCTTCTCACGCTGTTATGACTCGTACCATGTTCGTCGTTTATTACAAACCAAGGACTAGTCAGTTTATTGTTGGTTTGAATAAGTATTTGGAGGCAGTCAACAATCATAAGTTTTCTGTTGGTATGAGATTCAAGATGAGATTCGAAGGAGAGGACTCACCTGAAAGAAGATTTTCTGGCACTATTGTTGGGGTTGGGGATGTTTCTGCAGGATGGTCAAATTCTCACTGGAGATCATTGAAGGTTCAATGGGATGAAGCAGCAACAATTCCAAGACCAGAAAGAGTTTCTTCATGGGAGATAGAACCTTTTATAGCTTCTCCTACTTTGAATGTCACTCAAACATCAGTGAAAAGCAAAAGATCTAGGCCTTCCGATGTTTCATCTTGCGGTTTTTGGTATCCCGGATCATCCCAAGCTCACGAGCATACCCAATTAACCGGTGCTGCCGAACTCCAAGGCAAGGAGAGTCAGATTGTAAGCTCTAGAGTCTTGGTGGAAGGAATTTGGCCTAATTCACCACATTTGAATGTAACTTCCAACCCTTATGCTAACACAAACATCGCATCTAGACCGAGCGATGGCCTCACATGCGACCGAGTAGAAGACGCGAAAAAGAATGAGAATCCTCTTGATTGTTGGTTATTTGGAGTTAATTTGAACAACAAAAACAAATCTTGCAATGTTAATTCATGTTTAGAAAAAGAACTTGGATGTCCAAGTTTAAACATTGTTACTACAAGTGGTCCCAAAGAATCTATTATCCTTACCACCAATGCATGTGAAACTGAAAAGGTTCAGAGTCCTAACTATTCACTGTCCAACAAAGGGCAGCAGAAGAAAATAATTTCTGATGCATCACCAAATGAATGGCAGAACAAGCTGGCTACTGTACCATCCATGAGAACAAGGACTAAGGTGCAAATGGAAGGTGTAGCTGTTGGTCGTGCACTTGACTTAACCATGTTAAATGGTTATGATGAACTCATAGATGAAGTTGAGAAATTATTTGATATTAAAGGAGAGTTACGTTCCCAAAACAAATGGAGAGTAACTTTCACTGATAATGAAAATGACATGATGCTTGTCGGTGATGATCCATGGCCGGAATTTTGCAACATGGTAAAGAAGATTTTCATTTGTTCAAATGAGGAATTAAAGAAAATGAAATGCAAGTTGCCTAATTCTTCATTAGAGATTGAAGAGACATTGTTGAGTCTAGATTCACAGAATAGGGATGAGAATCAACAAATTCATGTGACTTAA
Protein sequence

>Msa1316550

MAHLECNLRAPGGSSQQEKGVKNDDLYEELWKLCAGPLVDVPNTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPSKILCRVVNIQLLAEQETDEIYACVALLPESDQTEPVDPDPNPSDSPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTPATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGENGQLRVGVRRIAKQHSPMPSSVISSQSMHLGVLATASHAVMTRTMFVVYYKPRTSQFIVGLNKYLEAVNNHKFSVGMRFKMRFEGEDSPERRFSGTIVGVGDVSAGWSNSHWRSLKVQWDEAATIPRPERVSSWEIEPFIASPTLNVTQTSVKSKRSRPSDVSSCGFWYPGSSQAHEHTQLTGAAELQGKESQIVSSRVLVEGIWPNSPHLNVTSNPYANTNIASRPSDGLTCDRVEDAKKNENPLDCWLFGVNLNNKNKSCNVNSCLEKELGCPSLNIVTTSGPKESIILTTNACETEKVQSPNYSLSNKGQQKKIISDASPNEWQNKLATVPSMRTRTKVQMEGVAVGRALDLTMLNGYDELIDEVEKLFDIKGELRSQNKWRVTFTDNENDMMLVGDDPWPEFCNMVKKIFICSNEELKKMKCKLPNSSLEIEETLLSLDSQNRDENQQIHVT*