AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1388780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388780 MtrunA17_Chr8g0346711 98.523 677 10 0 1 677 1 677 0.0 1398
Msa1388780 MtrunA17_Chr7g0239061 54.810 686 249 14 24 665 9 677 0.0 701
Msa1388780 MtrunA17_Chr4g0009751 57.853 624 218 12 28 625 18 622 0.0 656
Msa1388780 MtrunA17_Chr2g0276781 52.469 648 268 13 20 649 14 639 0.0 626
Msa1388780 MtrunA17_Chr8g0385791 63.636 363 126 5 10 367 39 400 2.99e-157 474
Msa1388780 MtrunA17_Chr8g0385791 40.212 189 91 5 468 645 621 798 3.28e-28 120
Msa1388780 MtrunA17_Chr5g0433301 48.214 392 187 6 8 394 3 383 1.30e-113 361
Msa1388780 MtrunA17_Chr5g0433301 43.038 79 43 1 569 645 725 803 1.18e-14 77.8
Msa1388780 MtrunA17_Chr3g0109391 49.733 374 172 6 26 394 23 385 1.51e-113 361
Msa1388780 MtrunA17_Chr3g0109391 42.697 89 48 2 559 645 724 811 4.20e-14 76.3
Msa1388780 MtrunA17_Chr2g0285461 52.907 344 157 4 26 364 20 363 3.40e-113 362
Msa1388780 MtrunA17_Chr2g0285461 43.011 93 50 2 555 645 772 863 6.20e-16 82.0
Msa1388780 MtrunA17_Chr8g0376771 52.210 362 166 5 8 364 3 362 4.08e-113 362
Msa1388780 MtrunA17_Chr8g0376771 31.633 196 98 7 463 645 697 869 1.99e-15 80.5
Msa1388780 MtrunA17_Chr2g0326281 48.819 381 164 9 27 379 54 431 1.78e-110 352
Msa1388780 MtrunA17_Chr2g0326281 51.579 95 45 1 558 651 695 789 1.87e-24 108
Msa1388780 MtrunA17_Chr4g0029671 44.878 410 202 9 27 421 52 452 2.90e-108 345
Msa1388780 MtrunA17_Chr4g0029671 55.056 89 39 1 558 645 663 751 1.37e-24 109
Msa1388780 MtrunA17_Chr1g0156321 51.585 347 163 4 16 358 31 376 3.92e-108 347
Msa1388780 MtrunA17_Chr1g0156321 41.748 103 54 3 545 645 744 842 7.45e-16 81.6
Msa1388780 MtrunA17_Chr4g0046371 47.872 376 154 9 29 378 38 397 1.26e-105 336
Msa1388780 MtrunA17_Chr8g0389081 52.149 349 157 7 22 362 24 370 5.70e-102 335
Msa1388780 MtrunA17_Chr8g0389081 46.154 91 46 2 557 645 984 1073 1.42e-18 90.5
Msa1388780 MtrunA17_Chr2g0282961 46.556 363 172 7 29 377 53 407 1.63e-100 320
Msa1388780 MtrunA17_Chr2g0301251 50.888 338 159 5 29 361 23 358 8.46e-98 325
Msa1388780 MtrunA17_Chr2g0301251 44.681 94 49 2 557 648 985 1077 2.88e-18 89.7
Msa1388780 MtrunA17_Chr4g0070181 51.032 339 157 7 29 361 23 358 1.86e-95 318
Msa1388780 MtrunA17_Chr4g0070181 46.154 91 46 2 557 645 993 1082 1.55e-18 90.5
Msa1388780 MtrunA17_Chr4g0028971 30.295 713 371 20 16 646 3 671 1.30e-70 243
Msa1388780 MtrunA17_Chr2g0326761 39.633 381 179 11 21 358 3 375 2.13e-66 231
Msa1388780 MtrunA17_Chr1g0181211 36.500 400 199 8 29 379 27 420 8.64e-64 224
Msa1388780 MtrunA17_Chr1g0199681 37.280 397 197 10 26 379 91 478 1.05e-60 216
Msa1388780 MtrunA17_Chr7g0264171 34.793 411 206 10 23 379 25 427 3.34e-59 210
Msa1388780 MtrunA17_Chr3g0115271 35.385 390 208 10 26 377 16 399 5.60e-56 200
Msa1388780 MtrunA17_Chr5g0417281 36.031 383 199 13 14 380 2 354 7.46e-56 199
Msa1388780 MtrunA17_Chr7g0264161 39.482 309 171 8 38 338 1 301 3.31e-55 190
Msa1388780 MtrunA17_Chr5g0424931 31.797 434 225 13 29 404 19 439 5.80e-54 193
Msa1388780 MtrunA17_Chr8g0356211 43.777 233 119 7 139 366 2 227 2.01e-53 186
Msa1388780 MtrunA17_Chr5g0436761 33.333 345 211 8 29 366 12 344 1.80e-50 182
Msa1388780 MtrunA17_Chr1g0178011 32.653 343 218 8 29 366 12 346 1.65e-47 174
Msa1388780 MtrunA17_Chr2g0289221 36.335 322 173 11 29 338 20 321 2.37e-46 168
Msa1388780 MtrunA17_Chr5g0417211 31.880 367 204 13 29 375 12 352 7.15e-40 151
Msa1388780 MtrunA17_Chr2g0277461 27.949 390 256 8 29 404 13 391 8.52e-39 149
Msa1388780 MtrunA17_Chr5g0424801 29.412 340 218 9 29 360 12 337 1.65e-35 138
Msa1388780 MtrunA17_Chr5g0425661 35.567 194 117 2 29 219 37 225 1.24e-34 132
Msa1388780 MtrunA17_Chr2g0277531 29.299 314 194 9 26 328 17 313 2.00e-34 133
Msa1388780 MtrunA17_Chr5g0425261 29.480 346 221 10 29 365 12 343 3.63e-34 134
Msa1388780 MtrunA17_Chr5g0424741 27.446 368 224 12 29 360 12 372 6.62e-34 136
Msa1388780 MtrunA17_Chr1g0156301 37.838 111 48 4 545 652 167 259 4.46e-12 67.0
Msa1388780 MtrunA17_Chr1g0193861 37.349 83 45 1 561 636 86 168 3.16e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388780 AT4G23980.2 56.309 634 229 16 26 645 9 608 0.0 655
Msa1388780 AT4G23980.1 56.044 637 228 15 26 645 9 610 0.0 654
Msa1388780 AT2G46530.1 53.492 673 232 13 1 668 1 597 0.0 652
Msa1388780 AT3G61830.1 54.219 640 221 9 23 658 19 590 0.0 652
Msa1388780 AT2G46530.3 54.058 653 229 12 20 668 33 618 0.0 649
Msa1388780 AT3G61830.2 53.213 607 212 9 56 658 1 539 0.0 595
Msa1388780 AT1G59750.4 49.924 657 284 13 8 648 1 628 0.0 587
Msa1388780 AT1G59750.2 49.772 659 284 13 8 648 1 630 0.0 585
Msa1388780 AT1G59750.1 49.547 662 284 13 8 648 1 633 0.0 585
Msa1388780 AT1G59750.3 49.547 662 284 13 8 648 1 633 0.0 585
Msa1388780 AT1G35540.1 47.105 639 270 15 26 653 24 605 0.0 541
Msa1388780 AT2G46530.2 52.220 563 197 11 110 668 16 510 1.13e-178 518
Msa1388780 AT1G34410.1 46.338 628 272 14 26 643 24 596 1.01e-174 512
Msa1388780 AT1G34310.1 46.926 618 269 16 26 636 24 589 1.10e-172 506
Msa1388780 AT1G35520.1 45.177 622 274 12 26 636 24 589 3.85e-171 502
Msa1388780 AT1G35240.1 45.367 626 267 14 26 643 24 582 6.55e-171 501
Msa1388780 AT1G34390.1 46.785 622 262 13 26 636 24 587 1.65e-169 498
Msa1388780 AT5G62000.2 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1388780 AT5G62000.2 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1388780 AT5G62000.5 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1388780 AT5G62000.5 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1388780 AT5G62000.3 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1388780 AT5G62000.3 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1388780 AT5G62000.1 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1388780 AT5G62000.1 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1388780 AT5G62000.4 64.756 349 112 5 26 367 58 402 3.83e-159 480
Msa1388780 AT5G62000.4 53.846 91 41 1 556 645 731 821 2.98e-25 112
Msa1388780 AT1G34170.1 42.500 480 245 12 26 493 22 482 8.86e-124 377
Msa1388780 AT5G37020.2 52.326 344 159 4 26 364 19 362 2.05e-113 359
Msa1388780 AT5G37020.1 52.326 344 159 4 26 364 19 362 4.91e-113 359
Msa1388780 AT5G37020.1 42.529 87 47 2 561 645 708 793 1.84e-13 74.3
Msa1388780 AT5G60450.2 49.454 366 167 8 26 377 38 399 2.20e-110 351
Msa1388780 AT5G60450.2 55.056 89 39 1 556 643 639 727 1.17e-23 107
Msa1388780 AT5G60450.1 49.454 366 167 8 26 377 62 423 3.53e-110 351
Msa1388780 AT5G60450.1 55.056 89 39 1 556 643 663 751 1.26e-23 107
Msa1388780 AT1G34170.2 40.292 479 231 11 26 493 22 456 1.62e-109 340
Msa1388780 AT1G30330.1 50.689 363 171 6 8 364 3 363 3.66e-109 352
Msa1388780 AT1G30330.1 39.785 93 53 2 555 645 791 882 1.69e-14 77.8
Msa1388780 AT1G30330.3 51.884 345 159 5 26 364 22 365 5.10e-109 352
Msa1388780 AT1G30330.3 39.785 93 53 2 555 645 793 884 1.65e-14 77.8
Msa1388780 AT1G30330.2 51.884 345 159 5 26 364 22 365 5.10e-109 352
Msa1388780 AT1G30330.2 39.785 93 53 2 555 645 793 884 1.65e-14 77.8
Msa1388780 AT1G19850.2 50.432 347 165 5 18 358 32 377 9.66e-108 347
Msa1388780 AT1G19850.2 42.105 114 58 5 545 653 771 881 9.31e-16 82.0
Msa1388780 AT1G19850.1 50.432 347 165 5 18 358 43 388 9.75e-108 347
Msa1388780 AT1G19850.1 42.105 114 58 5 545 653 782 892 9.54e-16 82.0
Msa1388780 AT1G34170.3 40.959 459 218 11 26 476 22 435 4.74e-106 333
Msa1388780 AT1G34170.3 64.773 88 31 0 561 648 436 523 5.31e-33 134
Msa1388780 AT2G33860.1 47.674 344 159 7 29 359 54 389 1.77e-100 320
Msa1388780 AT1G19220.1 50.147 339 160 7 29 361 23 358 2.82e-92 309
Msa1388780 AT1G19220.1 48.352 91 44 2 557 645 957 1046 7.42e-20 95.1
Msa1388780 AT5G20730.2 48.148 351 157 7 25 361 20 359 6.03e-91 307
Msa1388780 AT5G20730.2 46.154 91 46 2 557 645 1036 1125 8.91e-19 91.7
Msa1388780 AT5G20730.3 48.011 352 157 7 25 361 20 360 1.29e-90 306
Msa1388780 AT5G20730.3 46.154 91 46 2 557 645 1037 1126 9.66e-19 91.7
Msa1388780 AT5G20730.1 48.011 352 157 7 25 361 20 360 1.49e-90 306
Msa1388780 AT5G20730.1 46.154 91 46 2 557 645 1037 1126 8.92e-19 91.7
Msa1388780 AT5G37020.3 56.790 243 102 2 125 364 25 267 2.55e-84 280
Msa1388780 AT5G37020.3 43.023 86 46 2 562 645 614 698 1.70e-13 74.3
Msa1388780 AT2G33860.2 51.724 232 108 3 131 359 2 232 4.02e-74 246
Msa1388780 AT1G43950.1 55.122 205 86 4 26 230 24 222 8.05e-70 227
Msa1388780 AT4G30080.1 39.378 386 177 11 19 358 9 383 1.45e-65 229
Msa1388780 AT2G28350.2 38.806 402 188 12 29 380 10 403 2.17e-65 228
Msa1388780 AT2G28350.1 38.554 415 192 13 16 380 2 403 2.57e-65 229
Msa1388780 AT1G77850.1 33.780 373 188 11 30 358 20 377 1.70e-49 182
Msa1388780 AT1G77850.2 33.780 373 188 11 30 358 20 377 2.25e-49 182
Msa1388780 AT3G62100.1 36.842 95 52 2 548 636 74 166 1.79e-11 63.5
Msa1388780 AT3G16500.2 35.185 108 51 3 561 649 154 261 2.67e-11 65.1
Msa1388780 AT5G25890.1 35.065 77 50 0 561 637 83 159 4.85e-11 62.4
Msa1388780 AT3G17600.1 38.554 83 47 2 561 640 75 156 7.20e-11 61.6

Find 162 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTAGATTGTTGGTTATT+TGG 0.113239 tig0021182:-60826 Msa1388780:CDS
ACATTACAACTTCAAAATTA+TGG 0.170359 tig0021182:-59178 Msa1388780:three_prime_UTR
CAATTAGAGTACCTTCTTTC+AGG 0.175630 tig0021182:+61782 None:intergenic
GTTCGGCAGCACCGGTTAAT+TGG 0.204175 tig0021182:+61022 None:intergenic
CTGGCACTATTGTTGGGGTT+GGG 0.225274 tig0021182:-61500 Msa1388780:CDS
GAGAAATTATTTGATATTAA+AGG 0.227087 tig0021182:-59614 Msa1388780:CDS
CTTGACTTAACCATGTTAAA+TGG 0.228353 tig0021182:-59662 Msa1388780:CDS
TGTTGGTTTGAATAAGTATT+TGG 0.232129 tig0021182:-61873 Msa1388780:CDS
ACATTCAAATGTGGTGAATT+AGG 0.237390 tig0021182:+60943 None:intergenic
GGTAAGGATAATAGATTCTT+TGG 0.239075 tig0021182:+60705 None:intergenic
TGGATTCGTTCAGGTTCTTT+TGG 0.240408 tig0021182:-64367 Msa1388780:five_prime_UTR
TCCCATGAAGAAACTCTTTC+TGG 0.255185 tig0021182:+61314 None:intergenic
ATGCATTTCCCTATCTATAA+TGG 0.270464 tig0021182:-59063 Msa1388780:three_prime_UTR
TCAATCTCTAATGAAGAATT+AGG 0.281097 tig0021182:+59330 None:intergenic
AGCTCCTGAGTTGGAGTTGC+TGG 0.281379 tig0021182:+62637 None:intergenic
GAGTCTTGGTGGAAGGAATT+TGG 0.281586 tig0021182:-60966 Msa1388780:CDS
AATGAGTGAAACTTCTGTTT+TGG 0.287661 tig0021182:+62843 None:intergenic
TTTCTTCTGCTGCCCTTTGT+TGG 0.299837 tig0021182:+60633 None:intergenic
TTTGGAGAATCAGAAGGATT+TGG 0.313683 tig0021182:+62861 None:intergenic
TCTTGTTGAGAACTTCCTCC+TGG 0.315796 tig0021182:+63890 None:intergenic
TGGCACTATTGTTGGGGTTG+GGG 0.317435 tig0021182:-61499 Msa1388780:CDS
AAGACAACGACATCACTTAA+AGG 0.318312 tig0021182:-64332 Msa1388780:five_prime_UTR
TCTCTCTCATGAGTTATTGA+TGG 0.321161 tig0021182:-64032 Msa1388780:five_prime_UTR
CACATCTTGAGTGTAATCTA+AGG 0.329674 tig0021182:-63916 Msa1388780:CDS
TTTCTCTGTCTTGGGTTTGT+TGG 0.333715 tig0021182:+64188 None:intergenic
CATATTTGTTTACAAGCTAA+TGG 0.335674 tig0021182:+59083 None:intergenic
GGAAGTTCTCAACAAGAAAA+AGG 0.336508 tig0021182:-63884 Msa1388780:intron
ATCTCCGGCCACCAATCTTT+TGG 0.336866 tig0021182:+62362 None:intergenic
AGCTTGTTCTGCCATTCATT+TGG 0.341680 tig0021182:+60592 None:intergenic
GAAGAAACTCTTTCTGGTCT+TGG 0.342544 tig0021182:+61320 None:intergenic
AAAGTAGGAGATGCTATAAA+AGG 0.345024 tig0021182:+61284 None:intergenic
AAATATCTCACATCTGATTC+TGG 0.345650 tig0021182:+63056 None:intergenic
TATGAAACAAGAGCAGAAAA+AGG 0.347339 tig0021182:-64415 Msa1388780:five_prime_UTR
ACACACAATCCATTATAGAT+AGG 0.364770 tig0021182:+59054 None:intergenic
AAAACTCTGTCACCAGTATT+AGG 0.366460 tig0021182:+63512 None:intergenic
TGTTCTTTGTTATTGGTGAA+TGG 0.372470 tig0021182:-63939 Msa1388780:exon
TCTGGCACTATTGTTGGGGT+TGG 0.378298 tig0021182:-61501 Msa1388780:CDS
TTGGTAACGTGGATTCGTTC+AGG 0.379348 tig0021182:-64376 Msa1388780:five_prime_UTR
CTCGTGAGCTTGGGATGATC+CGG 0.387011 tig0021182:+61050 None:intergenic
CTTGTTGAGAACTTCCTCCT+GGG 0.389724 tig0021182:+63891 None:intergenic
GCGATGTTTGTGTTAGCATA+AGG 0.391550 tig0021182:+60910 None:intergenic
TCTATTAGTGGCTACTTTCA+AGG 0.396077 tig0021182:-64004 Msa1388780:five_prime_UTR
TTCGGCAGCACCGGTTAATT+GGG 0.399794 tig0021182:+61023 None:intergenic
CACTGATCAGGAATTGAATC+AGG 0.404063 tig0021182:-63298 Msa1388780:CDS
GCACGCCAAGATGCATGCTT+TGG 0.405641 tig0021182:+62071 None:intergenic
ATTGGGTATGCTCGTGAGCT+TGG 0.408537 tig0021182:+61040 None:intergenic
TACCTTAGTCCTTGTTCTCA+TGG 0.418020 tig0021182:+60555 None:intergenic
ACTCTCCTTGCCTTGGAGTT+CGG 0.421181 tig0021182:+61005 None:intergenic
TGAGTCTAGATTCACAGAAT+AGG 0.424499 tig0021182:-59296 Msa1388780:CDS
TGTCGTCAATATTCAGTTGT+TGG 0.424519 tig0021182:-63235 Msa1388780:intron
GGGGTTGGGGATGTTTCTGC+AGG 0.425128 tig0021182:-61486 Msa1388780:CDS
GACCAGAAAGAGTTTCTTCA+TGG 0.425372 tig0021182:-61316 Msa1388780:CDS
CTCTCTCATGAGTTATTGAT+GGG 0.426917 tig0021182:-64031 Msa1388780:five_prime_UTR
ACGAGAATCCTCTAGATTGT+TGG 0.427471 tig0021182:-60834 Msa1388780:CDS
GAGTCTAGATTCACAGAATA+GGG 0.429663 tig0021182:-59295 Msa1388780:CDS
TTGATGGGTTAATCTATTAG+TGG 0.430755 tig0021182:-64016 Msa1388780:five_prime_UTR
GAAGTTGTGTGCAGGACCTT+TGG 0.431799 tig0021182:-63543 Msa1388780:CDS
GCCTTGGAGTTCGGCAGCAC+CGG 0.433432 tig0021182:+61014 None:intergenic
TTGTTGGACAGTGAATAGTT+AGG 0.435729 tig0021182:+60649 None:intergenic
ATGATTTGTATGAAGAGTTA+TGG 0.440189 tig0021182:-63565 Msa1388780:CDS
AATTATGGACTACATGAAGT+TGG 0.443341 tig0021182:-59163 Msa1388780:three_prime_UTR
AGGACTAGTCAGTTTATTGT+TGG 0.445609 tig0021182:-61890 Msa1388780:CDS
CAGTGAAAAGCAAAAGATCT+AGG 0.447954 tig0021182:-61244 Msa1388780:CDS
CGATGTTTGTGTTAGCATAA+GGG 0.449060 tig0021182:+60911 None:intergenic
TTGGTGGATGTTCCTAATAC+TGG 0.450168 tig0021182:-63524 Msa1388780:CDS
TTTCACATGCATTGGTGGTA+AGG 0.453304 tig0021182:+60689 None:intergenic
GTAAGGATAATAGATTCTTT+GGG 0.458740 tig0021182:+60706 None:intergenic
TTGGGGATGTTTCTGCAGGA+TGG 0.464475 tig0021182:-61482 Msa1388780:CDS
ATTTGTCGCATCCAAAAGAT+TGG 0.466204 tig0021182:-62373 Msa1388780:CDS
TTCTCACTGGAGATCATTGA+AGG 0.467761 tig0021182:-61454 Msa1388780:intron
CTAGCAGCAAAGGATCTTCA+TGG 0.467822 tig0021182:-62616 Msa1388780:CDS
GATTGTTAGCTCTAGAGTCT+TGG 0.470460 tig0021182:-60980 Msa1388780:CDS
TTCAGTTTCACATGCATTGG+TGG 0.470670 tig0021182:+60684 None:intergenic
CACGAGCATACCCAATTAAC+CGG 0.472338 tig0021182:-61033 Msa1388780:CDS
TTGGGTATGCTCGTGAGCTT+GGG 0.472365 tig0021182:+61041 None:intergenic
GTTGTAAGCAAGTGCCTCCT+TGG 0.473074 tig0021182:+62408 None:intergenic
GAATCAGAAGGATTTGGATC+AGG 0.474760 tig0021182:+62867 None:intergenic
TTAAACATTGTTACTACAAG+TGG 0.477123 tig0021182:-60730 Msa1388780:CDS
GGATTTGGATCAGGATCTAC+AGG 0.478045 tig0021182:+62876 None:intergenic
TACCGAGTGCTTGCCTCCAT+TGG 0.478046 tig0021182:-62754 Msa1388780:intron
AGGCAACAACGTTGGGAAGT+TGG 0.479657 tig0021182:-64395 Msa1388780:five_prime_UTR
GCTGCAAGCATCCACTGATC+AGG 0.479756 tig0021182:-63310 Msa1388780:CDS
TTAGTCCTTGTTCTCATGGA+TGG 0.481222 tig0021182:+60559 None:intergenic
CTGATTCAATTCCTGATCAG+TGG 0.488028 tig0021182:+63299 None:intergenic
CTACTTTCCTCAAGGTCACA+TGG 0.489690 tig0021182:-63489 Msa1388780:CDS
AGTTACGTTCACAAAACAAA+TGG 0.489755 tig0021182:-59589 Msa1388780:CDS
TGGCTTGATATCACAGATGA+AGG 0.497591 tig0021182:+62091 None:intergenic
GTAGTAACAATGTTTAAACT+TGG 0.504684 tig0021182:+60736 None:intergenic
CAATGCATGTGAAACTGAAA+AGG 0.505554 tig0021182:-60680 Msa1388780:CDS
GACACCAGCAACTCCAACTC+AGG 0.508014 tig0021182:-62641 Msa1388780:CDS
GGCACTTGCTTACAACCGGC+TGG 0.513461 tig0021182:-62401 Msa1388780:CDS
AAGAAGAAGATGAAAGAAGA+AGG 0.518058 tig0021182:+63980 None:intergenic
CAATCTGACTCTCCTTGCCT+TGG 0.518741 tig0021182:+60998 None:intergenic
ATTGATGTTACTTACGGCCA+TGG 0.518924 tig0021182:+59515 None:intergenic
AGGAGGCACTTGCTTACAAC+CGG 0.519222 tig0021182:-62405 Msa1388780:CDS
TAGGAAAACAAAAGCATCTC+CGG 0.521346 tig0021182:+62347 None:intergenic
CAGGATGGTCAAATTCTCAC+TGG 0.521550 tig0021182:-61467 Msa1388780:CDS
GTTGTGTGCAGGACCTTTGG+TGG 0.521957 tig0021182:-63540 Msa1388780:CDS
ATCGTTGTAGGGGAGAGAAC+GGG 0.522255 tig0021182:-62162 Msa1388780:intron
AACTCAGGAGCTAGCAGCAA+AGG 0.522935 tig0021182:-62626 Msa1388780:CDS
TTTGCTGCTAGCTCCTGAGT+TGG 0.523480 tig0021182:+62628 None:intergenic
CACACAATCCATTATAGATA+GGG 0.525697 tig0021182:+59055 None:intergenic
TGTTAGCTCTAGAGTCTTGG+TGG 0.526901 tig0021182:-60977 Msa1388780:CDS
GAAAATGACATGATGCTTGT+CGG 0.530219 tig0021182:-59545 Msa1388780:CDS
TCAAGCCAAAGCATGCATCT+TGG 0.530849 tig0021182:-62076 Msa1388780:CDS
CTGATGCATCACCAAATGAA+TGG 0.532983 tig0021182:-60603 Msa1388780:CDS
TTGTTGAGAACTTCCTCCTG+GGG 0.535275 tig0021182:+63892 None:intergenic
ATCCATGAGAACAAGGACTA+AGG 0.547818 tig0021182:-60557 Msa1388780:intron
GTTTGAGTGACATTCAAAGT+AGG 0.548095 tig0021182:+61269 None:intergenic
ACTATTCACTGTCCAACAAA+GGG 0.548112 tig0021182:-60645 Msa1388780:CDS
GAGTGTAATCTAAGGGCCCC+AGG 0.550495 tig0021182:-63908 Msa1388780:CDS
AAATGAATGGCAGAACAAGC+TGG 0.554989 tig0021182:-60590 Msa1388780:CDS
GATCGTTGTAGGGGAGAGAA+CGG 0.555589 tig0021182:-62163 Msa1388780:intron
GGCAACTGAGAGTTGGCGTT+AGG 0.557425 tig0021182:-62141 Msa1388780:CDS
TGCGACAAATGTACTCCAGC+CGG 0.557664 tig0021182:+62386 None:intergenic
TGGTTTGAATAAGTATTTGG+AGG 0.558023 tig0021182:-61870 Msa1388780:CDS
TCGCATGTGAGGCCATCGCT+CGG 0.560120 tig0021182:+60880 None:intergenic
GTTTGTGTTAGCATAAGGGT+TGG 0.562713 tig0021182:+60915 None:intergenic
CCTACCGATGTTTCATCTTG+CGG 0.563143 tig0021182:-61221 Msa1388780:intron
GAGAGGACTCACCTGAAAGA+AGG 0.565238 tig0021182:-61793 Msa1388780:intron
TGTCGCATCCAAAAGATTGG+TGG 0.567249 tig0021182:-62370 Msa1388780:CDS
CTGTACCATCCATGAGAACA+AGG 0.567765 tig0021182:-60564 Msa1388780:CDS
TGCTGCCGAACTCCAAGGCA+AGG 0.568457 tig0021182:-61010 Msa1388780:CDS
AACTATTCACTGTCCAACAA+AGG 0.576812 tig0021182:-60646 Msa1388780:CDS
ACCGGTGCTGCCGAACTCCA+AGG 0.581658 tig0021182:-61015 Msa1388780:CDS
AGCTCTAGAGTCTTGGTGGA+AGG 0.588538 tig0021182:-60973 Msa1388780:CDS
AGGATCTTCATGGATTTGAG+TGG 0.588735 tig0021182:-62606 Msa1388780:CDS
CAACGACATCACTTAAAGGA+AGG 0.591081 tig0021182:-64328 Msa1388780:five_prime_UTR
TCGTGAGCTTGGGATGATCC+GGG 0.591691 tig0021182:+61051 None:intergenic
TACCAATGGAGGCAAGCACT+CGG 0.591772 tig0021182:+62752 None:intergenic
GAGAACGGGCAACTGAGAGT+TGG 0.593646 tig0021182:-62148 Msa1388780:CDS
ACCAGAAAGAGTTTCTTCAT+GGG 0.596388 tig0021182:-61315 Msa1388780:CDS
TTTGAGAAGGTGCAAATGGA+AGG 0.597190 tig0021182:-59704 Msa1388780:intron
AAGTTTAAACACATATATAG+AGG 0.597684 tig0021182:-62583 Msa1388780:intron
TCGTCGTTTATTACAAACCA+AGG 0.600362 tig0021182:-62009 Msa1388780:intron
ACATCTTGAGTGTAATCTAA+GGG 0.603165 tig0021182:-63915 Msa1388780:CDS
CCAAATAACCAACAATCTAG+AGG 0.603997 tig0021182:+60826 None:intergenic
TGCTTGTCGGTGATGATCCA+TGG 0.605617 tig0021182:-59532 Msa1388780:CDS
ACTTGTTCCATGTGACCTTG+AGG 0.607836 tig0021182:+63482 None:intergenic
AGATTCAAGATGAGATTCGA+AGG 0.609071 tig0021182:-61815 Msa1388780:CDS
GATATCACAGATGAAGGCAT+AGG 0.610881 tig0021182:+62097 None:intergenic
GCATCCAAAAGATTGGTGGC+CGG 0.615102 tig0021182:-62366 Msa1388780:CDS
GGTAAGAAAATTACCAATGG+AGG 0.617017 tig0021182:+62741 None:intergenic
TTGGAAGTTACATTCAAATG+TGG 0.618182 tig0021182:+60934 None:intergenic
CAAGATGAGATTCGAAGGAG+AGG 0.618652 tig0021182:-61810 Msa1388780:CDS
GAGTTATGGAAGTTGTGTGC+AGG 0.618746 tig0021182:-63551 Msa1388780:CDS
TTCGACGGTAAATTGAAATG+TGG 0.618876 tig0021182:+63270 None:intergenic
GCATCTGATACTAGCACACA+TGG 0.620237 tig0021182:-62804 Msa1388780:CDS
TTCATCATAACCATTTAACA+TGG 0.625773 tig0021182:+59652 None:intergenic
TTTGTAATAAACGACGAACA+TGG 0.635651 tig0021182:+62015 None:intergenic
ATCGCATCTAGACCGAGCGA+TGG 0.639085 tig0021182:-60892 Msa1388780:CDS
TACTGTGATCAGGTCAACCA+AGG 0.641842 tig0021182:-62425 Msa1388780:intron
ACACGGCATAAAATCTTCGA+CGG 0.643988 tig0021182:+63255 None:intergenic
CAAATGGAAGGTGTAGCTGT+TGG 0.654600 tig0021182:-59692 Msa1388780:CDS
ACAACTGAATATTGACGACA+CGG 0.657736 tig0021182:+63238 None:intergenic
CGCACCGCAAGATGAAACAT+CGG 0.662128 tig0021182:+61217 None:intergenic
CCGCAAGATGAAACATCGGT+AGG 0.673349 tig0021182:+61221 None:intergenic
GTATTAGGAACATCCACCAA+AGG 0.686860 tig0021182:+63527 None:intergenic
ACGTTGGGAAGTTGGTAACG+TGG 0.694796 tig0021182:-64387 Msa1388780:five_prime_UTR
TCTGATACTAGCACACATGG+TGG 0.705702 tig0021182:-62801 Msa1388780:CDS
TGTGATCAGGTCAACCAAGG+AGG 0.725688 tig0021182:-62422 Msa1388780:intron
TGTAATCTAAGGGCCCCAGG+AGG 0.747523 tig0021182:-63905 Msa1388780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAACTACTAAAATA+TGG - tig0021182:63594-63613 Msa1388780:intron 10.0%
!! AAAAAAAACATTATAGGATT+TGG + tig0021182:59376-59395 None:intergenic 15.0%
!! AGTTACAAAAAAAACATTAT+AGG + tig0021182:59382-59401 None:intergenic 15.0%
!!! TTTTTGTTTATGTATATTGT+AGG - tig0021182:60864-60883 Msa1388780:CDS 15.0%
!!! GTAATTTATTGCATTTTATT+AGG - tig0021182:61558-61577 Msa1388780:intron 15.0%
!!! TTAAAAATTTCACAAACTTT+TGG + tig0021182:61591-61610 None:intergenic 15.0%
!!! TTTATACTTTTATTACACTA+AGG + tig0021182:63017-63036 None:intergenic 15.0%
!! GAAAAAAAAGAAAATGAAAT+TGG - tig0021182:63083-63102 Msa1388780:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + tig0021182:63236-63255 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + tig0021182:63237-63256 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+AGG + tig0021182:63300-63319 None:intergenic 15.0%
!!! TTTATTTTAGTTCTTATGTA+GGG + tig0021182:63583-63602 None:intergenic 15.0%
!! TAAAAAATTGTATATTTGCA+TGG - tig0021182:63675-63694 Msa1388780:intron 15.0%
!! TTGTTTATCTATTAATTTCA+AGG + tig0021182:63719-63738 None:intergenic 15.0%
!! AACAAGAAAAATATTTGAAA+TGG + tig0021182:63808-63827 None:intergenic 15.0%
!! GAGAAATTATTTGATATTAA+AGG - tig0021182:63918-63937 Msa1388780:CDS 15.0%
!!! TGAATATCCTTTTTTTTTTT+TGG - tig0021182:64411-64430 Msa1388780:five_prime_UTR 15.0%
!!! GAATATCCTTTTTTTTTTTT+GGG - tig0021182:64412-64431 Msa1388780:five_prime_UTR 15.0%
!!! TCATATTTTATTACTCTCTT+TGG - tig0021182:59693-59712 Msa1388780:CDS 20.0%
!!! TATCAAACTTTTTAGTCTTT+TGG - tig0021182:60179-60198 Msa1388780:intron 20.0%
!!! ATCAAACTTTTTAGTCTTTT+GGG - tig0021182:60180-60199 Msa1388780:intron 20.0%
!!! GATGTTTTTTTTTTGTTTGT+AGG - tig0021182:60409-60428 Msa1388780:intron 20.0%
!! AAGTTTAAACACATATATAG+AGG - tig0021182:60949-60968 Msa1388780:CDS 20.0%
!!! TTCATAATCAAATTTTCGAA+TGG - tig0021182:61021-61040 Msa1388780:CDS 20.0%
!! TAAATATCAACTTACAACAA+AGG + tig0021182:61984-62003 None:intergenic 20.0%
!! TGTATACAATTAACAGAAAA+TGG + tig0021182:62130-62149 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + tig0021182:63167-63186 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + tig0021182:63203-63222 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + tig0021182:63204-63223 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + tig0021182:63277-63296 None:intergenic 20.0%
!! CAACATAGATTAAATTCAAA+GGG + tig0021182:63519-63538 None:intergenic 20.0%
!! TCAACATAGATTAAATTCAA+AGG + tig0021182:63520-63539 None:intergenic 20.0%
!! CAAATAGTCAACATATTATA+GGG + tig0021182:63549-63568 None:intergenic 20.0%
!! TCAAATAGTCAACATATTAT+AGG + tig0021182:63550-63569 None:intergenic 20.0%
!!! TTATTTTAGTTCTTATGTAG+GGG + tig0021182:63582-63601 None:intergenic 20.0%
!!! GTTTATTTTAGTTCTTATGT+AGG + tig0021182:63584-63603 None:intergenic 20.0%
!!! TATTTTTCTTGTTTTTGAGA+AGG - tig0021182:63815-63834 Msa1388780:intron 20.0%
!! ACATTACAACTTCAAAATTA+TGG - tig0021182:64354-64373 Msa1388780:five_prime_UTR 20.0%
! AAAACAACTCTTCAAAAAGT+TGG - tig0021182:59233-59252 Msa1388780:three_prime_UTR 25.0%
! CAGTTACACACATAAAAATA+AGG + tig0021182:59432-59451 None:intergenic 25.0%
!!! GTTGTTTTGTTCTTTGTTAT+TGG - tig0021182:59586-59605 Msa1388780:CDS 25.0%
! AGAAAAAGGTCAATAATTTG+TGG - tig0021182:59662-59681 Msa1388780:CDS 25.0%
! TCTATGTTCATAAGGTAAAA+GGG + tig0021182:59827-59846 None:intergenic 25.0%
!!! ACTTTTTCAGAAACAAATCA+AGG - tig0021182:59874-59893 Msa1388780:intron 25.0%
!!! CTTTTTCAGAAACAAATCAA+GGG - tig0021182:59875-59894 Msa1388780:intron 25.0%
!!! TTTTTTTCTTGTGTTTTTGC+AGG - tig0021182:59933-59952 Msa1388780:intron 25.0%
!! ATGATTTGTATGAAGAGTTA+TGG - tig0021182:59967-59986 Msa1388780:intron 25.0%
! TACAAACTAGAACACAAAAA+TGG + tig0021182:60114-60133 None:intergenic 25.0%
! ATATTCCATGTTGAAAAGTT+AGG - tig0021182:60563-60582 Msa1388780:CDS 25.0%
! AAAATCAGAGAACGAAAATA+AGG + tig0021182:60998-61017 None:intergenic 25.0%
! GCAGAAAAGAAAATTATACA+AGG + tig0021182:61226-61245 None:intergenic 25.0%
! AAGATTCATTATCTAAGCTT+TGG - tig0021182:61337-61356 Msa1388780:CDS 25.0%
!!! TGTTGGTTTGAATAAGTATT+TGG - tig0021182:61659-61678 Msa1388780:intron 25.0%
!! AACAATCATAAGTTTTCTGT+TGG - tig0021182:61690-61709 Msa1388780:intron 25.0%
!!! CTGTTTTTAAGTTCAAATGA+GGG - tig0021182:61923-61942 Msa1388780:intron 25.0%
!! GATTATTTGATCAGATTTTC+TGG - tig0021182:62013-62032 Msa1388780:CDS 25.0%
! CAGAAAATGGAAATAAAGAT+AGG + tig0021182:62117-62136 None:intergenic 25.0%
!! AAAAGTTTTACATGCTCAAA+TGG + tig0021182:62155-62174 None:intergenic 25.0%
! TCATGTTTAGAAAAAGAACT+TGG - tig0021182:62769-62788 Msa1388780:CDS 25.0%
! GTAGTAACAATGTTTAAACT+TGG + tig0021182:62799-62818 None:intergenic 25.0%
! TTAAACATTGTTACTACAAG+TGG - tig0021182:62802-62821 Msa1388780:CDS 25.0%
! GTAAGGATAATAGATTCTTT+GGG + tig0021182:62829-62848 None:intergenic 25.0%
!! AAAGATTCCTTTCACATTTT+AGG - tig0021182:63042-63061 Msa1388780:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + tig0021182:63168-63187 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + tig0021182:63278-63297 None:intergenic 25.0%
! TGTATAAATAAAGAGGAAAG+TGG + tig0021182:63293-63312 None:intergenic 25.0%
! CCTAGTTTCAAAGAAAATAT+TGG + tig0021182:63445-63464 None:intergenic 25.0%
!!! CCAATATTTTCTTTGAAACT+AGG - tig0021182:63442-63461 Msa1388780:intron 25.0%
!!! TATTTTAGTTCTTATGTAGG+GGG + tig0021182:63581-63600 None:intergenic 25.0%
! CAAGGTTTAAATGTGTATTT+AGG + tig0021182:63701-63720 None:intergenic 25.0%
!!! ATCAAAGTTTTTCAGATTCA+AGG + tig0021182:63777-63796 None:intergenic 25.0%
! TTCATCATAACCATTTAACA+TGG + tig0021182:63883-63902 None:intergenic 25.0%
!! GATTTTCATTTGTTCAAATG+AGG - tig0021182:64153-64172 Msa1388780:five_prime_UTR 25.0%
! TCAATCTCTAATGAAGAATT+AGG + tig0021182:64205-64224 None:intergenic 25.0%
!!! AAACATGTCACCTTTTTTTT+TGG - tig0021182:64290-64309 Msa1388780:five_prime_UTR 25.0%
!!! CTTTTTTTTTGGTTTGAGAA+GGG - tig0021182:64301-64320 Msa1388780:five_prime_UTR 25.0%
!!! ATCCTTTTTTTTTTTTGGGT+AGG - tig0021182:64416-64435 Msa1388780:five_prime_UTR 25.0%
! CATATTTGTTTACAAGCTAA+TGG + tig0021182:64452-64471 None:intergenic 25.0%
TATGAAACAAGAGCAGAAAA+AGG - tig0021182:59117-59136 Msa1388780:three_prime_UTR 30.0%
!! ACTCTTCAAAAAGTTGGTTT+TGG - tig0021182:59239-59258 Msa1388780:three_prime_UTR 30.0%
!!! CAAAAAGTTGGTTTTGGTTT+TGG - tig0021182:59245-59264 Msa1388780:three_prime_UTR 30.0%
!!! GGTTTTTTTTTCTCTGTCTT+GGG + tig0021182:59355-59374 None:intergenic 30.0%
!!! TGGTTTTTTTTTCTCTGTCT+TGG + tig0021182:59356-59375 None:intergenic 30.0%
! GAGAGTTAAATGCATGTTTT+TGG + tig0021182:59460-59479 None:intergenic 30.0%
!! TTGATGGGTTAATCTATTAG+TGG - tig0021182:59516-59535 Msa1388780:intron 30.0%
AAGAAGAAGATGAAAGAAGA+AGG + tig0021182:59555-59574 None:intergenic 30.0%
!! TGTTCTTTGTTATTGGTGAA+TGG - tig0021182:59593-59612 Msa1388780:CDS 30.0%
ACATCTTGAGTGTAATCTAA+GGG - tig0021182:59617-59636 Msa1388780:CDS 30.0%
! AAAGGTCAATAATTTGTGGT+TGG - tig0021182:59666-59685 Msa1388780:CDS 30.0%
CTCTATGTTCATAAGGTAAA+AGG + tig0021182:59828-59847 None:intergenic 30.0%
! CTTTTACCTTATGAACATAG+AGG - tig0021182:59826-59845 Msa1388780:intron 30.0%
TTTCTTCCTCTATGTTCATA+AGG + tig0021182:59835-59854 None:intergenic 30.0%
TGTAATGTAAACACAACAAG+AGG + tig0021182:60338-60357 None:intergenic 30.0%
CACAACAAAAAACACATACA+AGG + tig0021182:60364-60383 None:intergenic 30.0%
AAATATCTCACATCTGATTC+TGG + tig0021182:60479-60498 None:intergenic 30.0%
! AAAAGCCTAACTTTTCAACA+TGG + tig0021182:60571-60590 None:intergenic 30.0%
!!! ACTGTTTCTGAAACTAGTTT+TGG - tig0021182:60601-60620 Msa1388780:CDS 30.0%
!!! AAACTAGTTTTGGTTTCTCT+TGG - tig0021182:60611-60630 Msa1388780:CDS 30.0%
! AATGAGTGAAACTTCTGTTT+TGG + tig0021182:60692-60711 None:intergenic 30.0%
TAGCATCATACAAAGAAACT+CGG + tig0021182:60815-60834 None:intergenic 30.0%
AAGGAAAACTTGAATACCTT+AGG + tig0021182:61207-61226 None:intergenic 30.0%
TGCTTTCGATGTTATATAGT+TGG - tig0021182:61243-61262 Msa1388780:CDS 30.0%
!! GGAGATTTGTTAGATATAGT+TGG - tig0021182:61264-61283 Msa1388780:CDS 30.0%
TTTGTAATAAACGACGAACA+TGG + tig0021182:61520-61539 None:intergenic 30.0%
ATTACAAAAACTACGAACCT+TGG + tig0021182:61543-61562 None:intergenic 30.0%
TGGTTTGAATAAGTATTTGG+AGG - tig0021182:61662-61681 Msa1388780:intron 30.0%
TAAACACTTAAGAGACTGTT+TGG + tig0021182:61900-61919 None:intergenic 30.0%
CCTCATTTGAACTTAAAAAC+AGG + tig0021182:61925-61944 None:intergenic 30.0%
!!! CCTGTTTTTAAGTTCAAATG+AGG - tig0021182:61922-61941 Msa1388780:intron 30.0%
TTACATTCTGACCACAATAA+TGG + tig0021182:61961-61980 None:intergenic 30.0%
!! TGTAAAACTTTTTGCCACTT+AGG - tig0021182:62163-62182 Msa1388780:intron 30.0%
AAAGTAGGAGATGCTATAAA+AGG + tig0021182:62251-62270 None:intergenic 30.0%
ACATTCAAATGTGGTGAATT+AGG + tig0021182:62592-62611 None:intergenic 30.0%
TTGGAAGTTACATTCAAATG+TGG + tig0021182:62601-62620 None:intergenic 30.0%
GGTAAGGATAATAGATTCTT+TGG + tig0021182:62830-62849 None:intergenic 30.0%
CATTGACCTCATTTATTCAA+AGG + tig0021182:63113-63132 None:intergenic 30.0%
CTTTGAATAAATGAGGTCAA+TGG - tig0021182:63111-63130 Msa1388780:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + tig0021182:63189-63208 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + tig0021182:63190-63209 None:intergenic 30.0%
CACTTTGAACTAAATTGTGA+AGG + tig0021182:63417-63436 None:intergenic 30.0%
CTTGACTTAACCATGTTAAA+TGG - tig0021182:63870-63889 Msa1388780:intron 30.0%
AGTTACGTTCACAAAACAAA+TGG - tig0021182:63943-63962 Msa1388780:five_prime_UTR 30.0%
! GCAAAGATTGATGTTACTTA+CGG + tig0021182:64026-64045 None:intergenic 30.0%
!! TGCCATATTTTTATACATGC+AGG - tig0021182:64107-64126 Msa1388780:five_prime_UTR 30.0%
!! GCCATATTTTTATACATGCA+GGG - tig0021182:64108-64127 Msa1388780:five_prime_UTR 30.0%
TCCCTGCATGTATAAAAATA+TGG + tig0021182:64112-64131 None:intergenic 30.0%
CCTTCTCAAACCAAAAAAAA+AGG + tig0021182:64303-64322 None:intergenic 30.0%
!!! CCTTTTTTTTTGGTTTGAGA+AGG - tig0021182:64300-64319 Msa1388780:five_prime_UTR 30.0%
!! AAATGGAGTGCTTGATTTTA+TGG - tig0021182:64324-64343 Msa1388780:five_prime_UTR 30.0%
! AATTATGGACTACATGAAGT+TGG - tig0021182:64369-64388 Msa1388780:five_prime_UTR 30.0%
! ACTACATGAAGTTGGATTTT+AGG - tig0021182:64377-64396 Msa1388780:five_prime_UTR 30.0%
AGCCTACCCAAAAAAAAAAA+AGG + tig0021182:64421-64440 None:intergenic 30.0%
ATGCATTTCCCTATCTATAA+TGG - tig0021182:64469-64488 Msa1388780:five_prime_UTR 30.0%
CACACAATCCATTATAGATA+GGG + tig0021182:64480-64499 None:intergenic 30.0%
ACACACAATCCATTATAGAT+AGG + tig0021182:64481-64500 None:intergenic 30.0%
AAGACAACGACATCACTTAA+AGG - tig0021182:59200-59219 Msa1388780:three_prime_UTR 35.0%
!!! GTTGGTTTTGGTTTTGGTTT+TGG - tig0021182:59251-59270 Msa1388780:exon 35.0%
TCTCTCTCATGAGTTATTGA+TGG - tig0021182:59500-59519 Msa1388780:intron 35.0%
CTCTCTCATGAGTTATTGAT+GGG - tig0021182:59501-59520 Msa1388780:intron 35.0%
! TCTATTAGTGGCTACTTTCA+AGG - tig0021182:59528-59547 Msa1388780:intron 35.0%
CACATCTTGAGTGTAATCTA+AGG - tig0021182:59616-59635 Msa1388780:CDS 35.0%
GGAAGTTCTCAACAAGAAAA+AGG - tig0021182:59648-59667 Msa1388780:CDS 35.0%
AAAACTCTGTCACCAGTATT+AGG + tig0021182:60023-60042 None:intergenic 35.0%
! AGAGTTTTCTACTTTCCTCA+AGG - tig0021182:60035-60054 Msa1388780:intron 35.0%
TTCGACGGTAAATTGAAATG+TGG + tig0021182:60265-60284 None:intergenic 35.0%
ACAACTGAATATTGACGACA+CGG + tig0021182:60297-60316 None:intergenic 35.0%
TGTCGTCAATATTCAGTTGT+TGG - tig0021182:60297-60316 Msa1388780:intron 35.0%
TTTGGAGAATCAGAAGGATT+TGG + tig0021182:60674-60693 None:intergenic 35.0%
!!! TTCTGTTTTGGAGAATCAGA+AGG + tig0021182:60680-60699 None:intergenic 35.0%
GGTAAGAAAATTACCAATGG+AGG + tig0021182:60794-60813 None:intergenic 35.0%
CTCGGTAAGAAAATTACCAA+TGG + tig0021182:60797-60816 None:intergenic 35.0%
GATTTGCATTGAATGAGAAG+TGG - tig0021182:61055-61074 Msa1388780:CDS 35.0%
ATTTGTCGCATCCAAAAGAT+TGG - tig0021182:61159-61178 Msa1388780:intron 35.0%
!! TAGGAAAACAAAAGCATCTC+CGG + tig0021182:61188-61207 None:intergenic 35.0%
!!! GAGATGCTTTTGTTTTCCTA+AGG - tig0021182:61188-61207 Msa1388780:intron 35.0%
TCGTCGTTTATTACAAACCA+AGG - tig0021182:61523-61542 Msa1388780:intron 35.0%
! ACATGTCTTTTGATCCATTC+AGG - tig0021182:61622-61641 Msa1388780:intron 35.0%
! ATAAACTGACTAGTCCTGAA+TGG + tig0021182:61639-61658 None:intergenic 35.0%
!! AGGACTAGTCAGTTTATTGT+TGG - tig0021182:61642-61661 Msa1388780:intron 35.0%
AGATTCAAGATGAGATTCGA+AGG - tig0021182:61717-61736 Msa1388780:intron 35.0%
! CAATTAGAGTACCTTCTTTC+AGG + tig0021182:61753-61772 None:intergenic 35.0%
!! CTGAAAGAAGGTACTCTAAT+TGG - tig0021182:61751-61770 Msa1388780:intron 35.0%
TCAAATGAGGGAATCTAAAC+AGG - tig0021182:61935-61954 Msa1388780:intron 35.0%
ATCTAAACAGGCCATTATTG+TGG - tig0021182:61947-61966 Msa1388780:intron 35.0%
!! AGATTTTCTGGCACTATTGT+TGG - tig0021182:62025-62044 Msa1388780:CDS 35.0%
!! GATTTTCTGGCACTATTGTT+GGG - tig0021182:62026-62045 Msa1388780:CDS 35.0%
!! ATTTTCTGGCACTATTGTTG+GGG - tig0021182:62027-62046 Msa1388780:CDS 35.0%
!! TTTTTGCCACTTAGGTTCAA+TGG - tig0021182:62171-62190 Msa1388780:intron 35.0%
!! TTTTGCCACTTAGGTTCAAT+GGG - tig0021182:62172-62191 Msa1388780:intron 35.0%
ACCAGAAAGAGTTTCTTCAT+GGG - tig0021182:62217-62236 Msa1388780:intron 35.0%
GTTTGAGTGACATTCAAAGT+AGG + tig0021182:62266-62285 None:intergenic 35.0%
CAGTGAAAAGCAAAAGATCT+AGG - tig0021182:62288-62307 Msa1388780:intron 35.0%
! TTAGTATTTTCTCGTTCACC+TGG - tig0021182:62417-62436 Msa1388780:intron 35.0%
! TAGTATTTTCTCGTTCACCT+GGG - tig0021182:62418-62437 Msa1388780:intron 35.0%
CAAAAACCTGAAGCAGTTAT+AGG + tig0021182:62457-62476 None:intergenic 35.0%
!! CTATAACTGCTTCAGGTTTT+TGG - tig0021182:62455-62474 Msa1388780:intron 35.0%
CGATGTTTGTGTTAGCATAA+GGG + tig0021182:62624-62643 None:intergenic 35.0%
! AGAGGATTCTCGTTCTTTTT+CGG + tig0021182:62691-62710 None:intergenic 35.0%
CCAAATAACCAACAATCTAG+AGG + tig0021182:62709-62728 None:intergenic 35.0%
! CCTCTAGATTGTTGGTTATT+TGG - tig0021182:62706-62725 Msa1388780:intron 35.0%
! CTTTTCAGTTTCACATGCAT+TGG + tig0021182:62854-62873 None:intergenic 35.0%
CAATGCATGTGAAACTGAAA+AGG - tig0021182:62852-62871 Msa1388780:CDS 35.0%
TTGTTGGACAGTGAATAGTT+AGG + tig0021182:62886-62905 None:intergenic 35.0%
AACTATTCACTGTCCAACAA+AGG - tig0021182:62886-62905 Msa1388780:CDS 35.0%
ACTATTCACTGTCCAACAAA+GGG - tig0021182:62887-62906 Msa1388780:CDS 35.0%
! GATTCCTTTCACATTTTAGG+AGG - tig0021182:63045-63064 Msa1388780:intron 35.0%
CTTACCTCCTAAAATGTGAA+AGG + tig0021182:63052-63071 None:intergenic 35.0%
GGTTGTCCTTTGAATAAATG+AGG - tig0021182:63104-63123 Msa1388780:CDS 35.0%
GAATAAATGAGGTCAATGGT+TGG - tig0021182:63115-63134 Msa1388780:intron 35.0%
GAAAATGGGTCAGTTATTCT+GGG + tig0021182:63153-63172 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+TGG + tig0021182:63154-63173 None:intergenic 35.0%
!! TGTTTTTGAGAAGGTGCAAA+TGG - tig0021182:63824-63843 Msa1388780:intron 35.0%
GAAAATGACATGATGCTTGT+CGG - tig0021182:63987-64006 Msa1388780:five_prime_UTR 35.0%
TGAGTCTAGATTCACAGAAT+AGG - tig0021182:64236-64255 Msa1388780:five_prime_UTR 35.0%
GAGTCTAGATTCACAGAATA+GGG - tig0021182:64237-64256 Msa1388780:five_prime_UTR 35.0%
!!! TTTTGGTTTGAGAAGGGAAA+TGG - tig0021182:64307-64326 Msa1388780:five_prime_UTR 35.0%
CAGAAAAAGGCAACAACGTT+GGG - tig0021182:59130-59149 Msa1388780:three_prime_UTR 40.0%
!! TGGATTCGTTCAGGTTCTTT+TGG - tig0021182:59165-59184 Msa1388780:three_prime_UTR 40.0%
!! GGATTCGTTCAGGTTCTTTT+GGG - tig0021182:59166-59185 Msa1388780:three_prime_UTR 40.0%
CAACGACATCACTTAAAGGA+AGG - tig0021182:59204-59223 Msa1388780:three_prime_UTR 40.0%
TTTCTCTGTCTTGGGTTTGT+TGG + tig0021182:59347-59366 None:intergenic 40.0%
GTATTAGGAACATCCACCAA+AGG + tig0021182:60008-60027 None:intergenic 40.0%
! TTGGTGGATGTTCCTAATAC+TGG - tig0021182:60008-60027 Msa1388780:intron 40.0%
CTGATTCAATTCCTGATCAG+TGG + tig0021182:60236-60255 None:intergenic 40.0%
CACTGATCAGGAATTGAATC+AGG - tig0021182:60234-60253 Msa1388780:intron 40.0%
ACACGGCATAAAATCTTCGA+CGG + tig0021182:60280-60299 None:intergenic 40.0%
!!! CTAGTTTTGGTTTCTCTTGG+TGG - tig0021182:60614-60633 Msa1388780:CDS 40.0%
GAATCAGAAGGATTTGGATC+AGG + tig0021182:60668-60687 None:intergenic 40.0%
AGGATCTTCATGGATTTGAG+TGG - tig0021182:60926-60945 Msa1388780:CDS 40.0%
! GTCTTGACTTGATCGTTGTA+GGG - tig0021182:61359-61378 Msa1388780:intron 40.0%
! TCTTGACTTGATCGTTGTAG+GGG - tig0021182:61360-61379 Msa1388780:intron 40.0%
! GATATCACAGATGAAGGCAT+AGG + tig0021182:61438-61457 None:intergenic 40.0%
TGGCTTGATATCACAGATGA+AGG + tig0021182:61444-61463 None:intergenic 40.0%
TTCTCACTGGAGATCATTGA+AGG - tig0021182:62078-62097 Msa1388780:CDS 40.0%
TTCATCCCATTGAACCTAAG+TGG + tig0021182:62180-62199 None:intergenic 40.0%
! GAAGAAACTCTTTCTGGTCT+TGG + tig0021182:62215-62234 None:intergenic 40.0%
GACCAGAAAGAGTTTCTTCA+TGG - tig0021182:62216-62235 Msa1388780:intron 40.0%
TCCCATGAAGAAACTCTTTC+TGG + tig0021182:62221-62240 None:intergenic 40.0%
ATCGATCCTATAACTGCTTC+AGG - tig0021182:62448-62467 Msa1388780:intron 40.0%
!! GATTGTTAGCTCTAGAGTCT+TGG - tig0021182:62552-62571 Msa1388780:intron 40.0%
GTTTGTGTTAGCATAAGGGT+TGG + tig0021182:62620-62639 None:intergenic 40.0%
GCGATGTTTGTGTTAGCATA+AGG + tig0021182:62625-62644 None:intergenic 40.0%
!!! TCTTTTTCGGGTCTTCTACT+CGG + tig0021182:62678-62697 None:intergenic 40.0%
! GAGGATTCTCGTTCTTTTTC+GGG + tig0021182:62690-62709 None:intergenic 40.0%
ACGAGAATCCTCTAGATTGT+TGG - tig0021182:62698-62717 Msa1388780:intron 40.0%
! TTTCACATGCATTGGTGGTA+AGG + tig0021182:62846-62865 None:intergenic 40.0%
TTCAGTTTCACATGCATTGG+TGG + tig0021182:62851-62870 None:intergenic 40.0%
CTGATGCATCACCAAATGAA+TGG - tig0021182:62929-62948 Msa1388780:intron 40.0%
! AGCTTGTTCTGCCATTCATT+TGG + tig0021182:62943-62962 None:intergenic 40.0%
AAATGAATGGCAGAACAAGC+TGG - tig0021182:62942-62961 Msa1388780:intron 40.0%
TTAGTCCTTGTTCTCATGGA+TGG + tig0021182:62976-62995 None:intergenic 40.0%
ATCCATGAGAACAAGGACTA+AGG - tig0021182:62975-62994 Msa1388780:intron 40.0%
TACCTTAGTCCTTGTTCTCA+TGG + tig0021182:62980-62999 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG - tig0021182:63321-63340 Msa1388780:intron 40.0%
ATCTGTGTGAAATGAGCCAA+GGG - tig0021182:63322-63341 Msa1388780:intron 40.0%
AGCCAAGGGGTCAAATAAAT+TGG - tig0021182:63336-63355 Msa1388780:intron 40.0%
GCCAAGGGGTCAAATAAATT+GGG - tig0021182:63337-63356 Msa1388780:intron 40.0%
TCCCAATTTATTTGACCCCT+TGG + tig0021182:63341-63360 None:intergenic 40.0%
AGGGGTCAAATAAATTGGGA+CGG - tig0021182:63341-63360 Msa1388780:intron 40.0%
GTCAAATAAATTGGGACGGA+GGG - tig0021182:63345-63364 Msa1388780:intron 40.0%
! TTTGAGAAGGTGCAAATGGA+AGG - tig0021182:63828-63847 Msa1388780:intron 40.0%
! ATGCAGGGAATTTTGCAACA+TGG - tig0021182:64123-64142 Msa1388780:five_prime_UTR 40.0%
GCAGAAAAAGGCAACAACGT+TGG - tig0021182:59129-59148 Msa1388780:three_prime_UTR 45.0%
!! TTGGTAACGTGGATTCGTTC+AGG - tig0021182:59156-59175 Msa1388780:three_prime_UTR 45.0%
TTGTTGAGAACTTCCTCCTG+GGG + tig0021182:59643-59662 None:intergenic 45.0%
CTTGTTGAGAACTTCCTCCT+GGG + tig0021182:59644-59663 None:intergenic 45.0%
TCTTGTTGAGAACTTCCTCC+TGG + tig0021182:59645-59664 None:intergenic 45.0%
GAGTTATGGAAGTTGTGTGC+AGG - tig0021182:59981-60000 Msa1388780:intron 45.0%
CTACTTTCCTCAAGGTCACA+TGG - tig0021182:60043-60062 Msa1388780:intron 45.0%
ACTTGTTCCATGTGACCTTG+AGG + tig0021182:60053-60072 None:intergenic 45.0%
GGATTTGGATCAGGATCTAC+AGG + tig0021182:60659-60678 None:intergenic 45.0%
GCATCTGATACTAGCACACA+TGG - tig0021182:60728-60747 Msa1388780:CDS 45.0%
TCTGATACTAGCACACATGG+TGG - tig0021182:60731-60750 Msa1388780:CDS 45.0%
CTAGCAGCAAAGGATCTTCA+TGG - tig0021182:60916-60935 Msa1388780:CDS 45.0%
! ACCTGATCACAGTAGTGGAA+GGG + tig0021182:61101-61120 None:intergenic 45.0%
TACTGTGATCAGGTCAACCA+AGG - tig0021182:61107-61126 Msa1388780:intron 45.0%
TGTCGCATCCAAAAGATTGG+TGG - tig0021182:61162-61181 Msa1388780:intron 45.0%
! GGTCTTGACTTGATCGTTGT+AGG - tig0021182:61358-61377 Msa1388780:intron 45.0%
TCAAGCCAAAGCATGCATCT+TGG - tig0021182:61456-61475 Msa1388780:CDS 45.0%
CAAGATGAGATTCGAAGGAG+AGG - tig0021182:61722-61741 Msa1388780:intron 45.0%
CAGGATGGTCAAATTCTCAC+TGG - tig0021182:62065-62084 Msa1388780:CDS 45.0%
CCTACCGATGTTTCATCTTG+CGG - tig0021182:62311-62330 Msa1388780:intron 45.0%
TAGGATCGATGTTCAAACCC+AGG + tig0021182:62438-62457 None:intergenic 45.0%
!!! GCTTCAGGTTTTTGGTATCC+CGG - tig0021182:62463-62482 Msa1388780:intron 45.0%
CACGAGCATACCCAATTAAC+CGG - tig0021182:62499-62518 Msa1388780:intron 45.0%
!! TGTTAGCTCTAGAGTCTTGG+TGG - tig0021182:62555-62574 Msa1388780:intron 45.0%
GAGTCTTGGTGGAAGGAATT+TGG - tig0021182:62566-62585 Msa1388780:intron 45.0%
TTTCTTCTGCTGCCCTTTGT+TGG + tig0021182:62902-62921 None:intergenic 45.0%
CTGTACCATCCATGAGAACA+AGG - tig0021182:62968-62987 Msa1388780:intron 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG + tig0021182:63149-63168 None:intergenic 45.0%
TCTGTGTGAAATGAGCCAAG+GGG - tig0021182:63323-63342 Msa1388780:intron 45.0%
GGTCAAATAAATTGGGACGG+AGG - tig0021182:63344-63363 Msa1388780:intron 45.0%
! CAAATGGAAGGTGTAGCTGT+TGG - tig0021182:63840-63859 Msa1388780:intron 45.0%
!!! ATATACAATTTTTTATTTTT+AGG + tig0021182:63670-63689 None:intergenic 5.0%
!!! TTGAAATATTAATAATTTTA+TGG + tig0021182:63748-63767 None:intergenic 5.0%
!! AAATTATTAATATTTCAAAA+TGG - tig0021182:63750-63769 Msa1388780:intron 5.0%
AGGCAACAACGTTGGGAAGT+TGG - tig0021182:59137-59156 Msa1388780:three_prime_UTR 50.0%
!! ACGTTGGGAAGTTGGTAACG+TGG - tig0021182:59145-59164 Msa1388780:three_prime_UTR 50.0%
GAAGTTGTGTGCAGGACCTT+TGG - tig0021182:59989-60008 Msa1388780:intron 50.0%
TACCAATGGAGGCAAGCACT+CGG + tig0021182:60783-60802 None:intergenic 50.0%
TTTGCTGCTAGCTCCTGAGT+TGG + tig0021182:60907-60926 None:intergenic 50.0%
AACTCAGGAGCTAGCAGCAA+AGG - tig0021182:60906-60925 Msa1388780:CDS 50.0%
TCCCTTCCACTACTGTGATC+AGG - tig0021182:61097-61116 Msa1388780:intron 50.0%
! GACCTGATCACAGTAGTGGA+AGG + tig0021182:61102-61121 None:intergenic 50.0%
GGTTGACCTGATCACAGTAG+TGG + tig0021182:61106-61125 None:intergenic 50.0%
TGTGATCAGGTCAACCAAGG+AGG - tig0021182:61110-61129 Msa1388780:intron 50.0%
GTTGTAAGCAAGTGCCTCCT+TGG + tig0021182:61127-61146 None:intergenic 50.0%
!! AGGAGGCACTTGCTTACAAC+CGG - tig0021182:61127-61146 Msa1388780:intron 50.0%
TGCGACAAATGTACTCCAGC+CGG + tig0021182:61149-61168 None:intergenic 50.0%
! GCATCCAAAAGATTGGTGGC+CGG - tig0021182:61166-61185 Msa1388780:intron 50.0%
! ATCTCCGGCCACCAATCTTT+TGG + tig0021182:61173-61192 None:intergenic 50.0%
GATCGTTGTAGGGGAGAGAA+CGG - tig0021182:61369-61388 Msa1388780:intron 50.0%
ATCGTTGTAGGGGAGAGAAC+GGG - tig0021182:61370-61389 Msa1388780:intron 50.0%
GAGAGGACTCACCTGAAAGA+AGG - tig0021182:61739-61758 Msa1388780:intron 50.0%
TCTGGCACTATTGTTGGGGT+TGG - tig0021182:62031-62050 Msa1388780:CDS 50.0%
CTGGCACTATTGTTGGGGTT+GGG - tig0021182:62032-62051 Msa1388780:CDS 50.0%
TGGCACTATTGTTGGGGTTG+GGG - tig0021182:62033-62052 Msa1388780:CDS 50.0%
! TTGGGGATGTTTCTGCAGGA+TGG - tig0021182:62050-62069 Msa1388780:CDS 50.0%
CCGCAAGATGAAACATCGGT+AGG + tig0021182:62314-62333 None:intergenic 50.0%
CGCACCGCAAGATGAAACAT+CGG + tig0021182:62318-62337 None:intergenic 50.0%
TTGGGTATGCTCGTGAGCTT+GGG + tig0021182:62494-62513 None:intergenic 50.0%
ATTGGGTATGCTCGTGAGCT+TGG + tig0021182:62495-62514 None:intergenic 50.0%
!! TTCGGCAGCACCGGTTAATT+GGG + tig0021182:62512-62531 None:intergenic 50.0%
ACTCTCCTTGCCTTGGAGTT+CGG + tig0021182:62530-62549 None:intergenic 50.0%
CAATCTGACTCTCCTTGCCT+TGG + tig0021182:62537-62556 None:intergenic 50.0%
!! AGCTCTAGAGTCTTGGTGGA+AGG - tig0021182:62559-62578 Msa1388780:intron 50.0%
!! GTCAGTTATTCTGGGACGGA+GGG + tig0021182:63145-63164 None:intergenic 50.0%
GAGTGTAATCTAAGGGCCCC+AGG - tig0021182:59624-59643 Msa1388780:CDS 55.0%
TGTAATCTAAGGGCCCCAGG+AGG - tig0021182:59627-59646 Msa1388780:CDS 55.0%
GTTGTGTGCAGGACCTTTGG+TGG - tig0021182:59992-60011 Msa1388780:intron 55.0%
GCTGCAAGCATCCACTGATC+AGG - tig0021182:60222-60241 Msa1388780:intron 55.0%
TACCGAGTGCTTGCCTCCAT+TGG - tig0021182:60778-60797 Msa1388780:CDS 55.0%
GACACCAGCAACTCCAACTC+AGG - tig0021182:60891-60910 Msa1388780:CDS 55.0%
! AGCTCCTGAGTTGGAGTTGC+TGG + tig0021182:60898-60917 None:intergenic 55.0%
GAGAACGGGCAACTGAGAGT+TGG - tig0021182:61384-61403 Msa1388780:intron 55.0%
GGCAACTGAGAGTTGGCGTT+AGG - tig0021182:61391-61410 Msa1388780:intron 55.0%
GCACGCCAAGATGCATGCTT+TGG + tig0021182:61464-61483 None:intergenic 55.0%
TCGTGAGCTTGGGATGATCC+GGG + tig0021182:62484-62503 None:intergenic 55.0%
CTCGTGAGCTTGGGATGATC+CGG + tig0021182:62485-62504 None:intergenic 55.0%
!! GTTCGGCAGCACCGGTTAAT+TGG + tig0021182:62513-62532 None:intergenic 55.0%
ATCGCATCTAGACCGAGCGA+TGG - tig0021182:62640-62659 Msa1388780:CDS 55.0%
CTTCTACTCGGTCGCATGTG+AGG + tig0021182:62666-62685 None:intergenic 55.0%
!! GGTCAGTTATTCTGGGACGG+AGG + tig0021182:63146-63165 None:intergenic 55.0%
!! GGACGGAGGGAGTACTATGT+AGG - tig0021182:63358-63377 Msa1388780:intron 55.0%
GGCACTTGCTTACAACCGGC+TGG - tig0021182:61131-61150 Msa1388780:intron 60.0%
! GGGGTTGGGGATGTTTCTGC+AGG - tig0021182:62046-62065 Msa1388780:CDS 60.0%
TGCTGCCGAACTCCAAGGCA+AGG - tig0021182:62522-62541 Msa1388780:intron 60.0%
TCGCATGTGAGGCCATCGCT+CGG + tig0021182:62655-62674 None:intergenic 60.0%
!! ACCGGTGCTGCCGAACTCCA+AGG - tig0021182:62517-62536 Msa1388780:intron 65.0%
GCCTTGGAGTTCGGCAGCAC+CGG + tig0021182:62521-62540 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0021182 gene 59018 64536 59018 ID=Msa1388780;Name=Msa1388780
tig0021182 mRNA 59018 64536 59018 ID=Msa1388780-mRNA-1;Parent=Msa1388780;Name=Msa1388780-mRNA-1;_AED=0.08;_eAED=0.08;_QI=594|1|1|1|1|1|14|248|677
tig0021182 exon 59018 59425 59018 ID=Msa1388780-mRNA-1:exon:11318;Parent=Msa1388780-mRNA-1
tig0021182 exon 59530 59717 59530 ID=Msa1388780-mRNA-1:exon:11317;Parent=Msa1388780-mRNA-1
tig0021182 exon 60558 61084 60558 ID=Msa1388780-mRNA-1:exon:11316;Parent=Msa1388780-mRNA-1
tig0021182 exon 61222 61369 61222 ID=Msa1388780-mRNA-1:exon:11315;Parent=Msa1388780-mRNA-1
tig0021182 exon 61455 61527 61455 ID=Msa1388780-mRNA-1:exon:11314;Parent=Msa1388780-mRNA-1
tig0021182 exon 61794 61910 61794 ID=Msa1388780-mRNA-1:exon:11313;Parent=Msa1388780-mRNA-1
tig0021182 exon 62010 62174 62010 ID=Msa1388780-mRNA-1:exon:11312;Parent=Msa1388780-mRNA-1
tig0021182 exon 62345 62435 62345 ID=Msa1388780-mRNA-1:exon:11311;Parent=Msa1388780-mRNA-1
tig0021182 exon 62584 62668 62584 ID=Msa1388780-mRNA-1:exon:11310;Parent=Msa1388780-mRNA-1
tig0021182 exon 62755 62907 62755 ID=Msa1388780-mRNA-1:exon:11309;Parent=Msa1388780-mRNA-1
tig0021182 exon 63067 63123 63067 ID=Msa1388780-mRNA-1:exon:11308;Parent=Msa1388780-mRNA-1
tig0021182 exon 63236 63331 63236 ID=Msa1388780-mRNA-1:exon:11307;Parent=Msa1388780-mRNA-1
tig0021182 exon 63484 63599 63484 ID=Msa1388780-mRNA-1:exon:11306;Parent=Msa1388780-mRNA-1
tig0021182 exon 63885 64536 63885 ID=Msa1388780-mRNA-1:exon:11305;Parent=Msa1388780-mRNA-1
tig0021182 five_prime_UTR 63943 64536 63943 ID=Msa1388780-mRNA-1:five_prime_utr;Parent=Msa1388780-mRNA-1
tig0021182 CDS 63885 63942 63885 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 63484 63599 63484 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 63236 63331 63236 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 63067 63123 63067 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 62755 62907 62755 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 62584 62668 62584 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 62345 62435 62345 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 62010 62174 62010 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 61794 61910 61794 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 61455 61527 61455 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 61222 61369 61222 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 60558 61084 60558 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 59530 59717 59530 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 CDS 59266 59425 59266 ID=Msa1388780-mRNA-1:cds;Parent=Msa1388780-mRNA-1
tig0021182 three_prime_UTR 59018 59265 59018 ID=Msa1388780-mRNA-1:three_prime_utr;Parent=Msa1388780-mRNA-1
Gene Sequence

>Msa1388780

ATGGCACATCTTGAGTGTAATCTAAGGGCCCCAGGAGGAAGTTCTCAACAAGAAAAAGGTGTTAAAAATGATGATTTGTATGAAGAGTTATGGAAGTTGTGTGCAGGACCTTTGGTGGATGTTCCTAATACTGGTGACAGAGTTTTCTACTTTCCTCAAGGTCACATGGAACAACTGCAAGCATCCACTGATCAGGAATTGAATCAGGAAATTCCACATTTCAATTTACCGTCGAAGATTTTATGCCGTGTCGTCAATATTCAGTTGTTGGCTGAGCAAGAAACTGATGAGATTTATGCTTGTGTTGCTTTGCTTCCAGAATCAGATCAAACTGAGCCTGTAGATCCTGATCCAAATCCTTCTGATTCTCCAAAACAGAAGTTTCACTCATTTTGTAAAATATTAACTGCATCTGATACTAGCACACATGGTGGATTTTCAGTTCTTAGAAAGCATGCTACCGAGTGCTTGCCTCCATTGGACATGACACCAGCAACTCCAACTCAGGAGCTAGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAACACATATATAGAGGTCAACCAAGGAGGCACTTGCTTACAACCGGCTGGAGTACATTTGTCGCATCCAAAAGATTGGTGGCCGGAGATGCTTTTGTTTTCCTAAGGGGAGAGAACGGGCAACTGAGAGTTGGCGTTAGGCGTATAGCTAAGCAGCACAGTCCTATGCCTTCATCTGTGATATCAAGCCAAAGCATGCATCTTGGCGTGCTTGCTACTGCTTCTCACGCTGTTATGACTCGTACCATGTTCGTCGTTTATTACAAACCAAGGACTAGTCAGTTTATTGTTGGTTTGAATAAGTATTTGGAGGCAGTCAACAATCATAAGTTTTCTGTTGGTATGAGATTCAAGATGAGATTCGAAGGAGAGGACTCACCTGAAAGAAGATTTTCTGGCACTATTGTTGGGGTTGGGGATGTTTCTGCAGGATGGTCAAATTCTCACTGGAGATCATTGAAGGTTCAATGGGATGAAGCAGCAACAATTCCAAGACCAGAAAGAGTTTCTTCATGGGAGATAGAACCTTTTATAGCATCTCCTACTTTGAATGTCACTCAAACATCAGTGAAAAGCAAAAGATCTAGGCCTACCGATGTTTCATCTTGCGGTTTTTGGTATCCCGGATCATCCCAAGCTCACGAGCATACCCAATTAACCGGTGCTGCCGAACTCCAAGGCAAGGAGAGTCAGATTGTTAGCTCTAGAGTCTTGGTGGAAGGAATTTGGCCTAATTCACCACATTTGAATGTAACTTCCAACCCTTATGCTAACACAAACATCGCATCTAGACCGAGCGATGGCCTCACATGCGACCGAGTAGAAGACCCGAAAAAGAACGAGAATCCTCTAGATTGTTGGTTATTTGGAGTTAATTTGAATAACAAAAACAAATCTTGCAATGTTAATTCATGTTTAGAAAAAGAACTTGGATGTCCAAGTTTAAACATTGTTACTACAAGTGGTCCCAAAGAATCTATTATCCTTACCACCAATGCATGTGAAACTGAAAAGGTTCAGAGTCCTAACTATTCACTGTCCAACAAAGGGCAGCAGAAGAAAATAATTTCTGATGCATCACCAAATGAATGGCAGAACAAGCTGGCTACTGTACCATCCATGAGAACAAGGACTAAGGTGCAAATGGAAGGTGTAGCTGTTGGTCGTGCACTTGACTTAACCATGTTAAATGGTTATGATGAACTCATAGATGAAGTTGAGAAATTATTTGATATTAAAGGAGAGTTACGTTCACAAAACAAATGGAGAGTTACTTTCACTGATAATGAAAATGACATGATGCTTGTCGGTGATGATCCATGGCCGGAATTTTGCAACATGGTAAAGAAGATTTTCATTTGTTCAAATGAGGAATTAAAGAAAATGAAATGCAAGTTACCTAATTCTTCATTAGAGATTGAAGAGACTTTGTTGAGTCTAGATTCACAGAATAGGGATGAGAATCAACAAATTCATGTGACTTAA
Protein sequence

>Msa1388780

MAHLECNLRAPGGSSQQEKGVKNDDLYEELWKLCAGPLVDVPNTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPSKILCRVVNIQLLAEQETDEIYACVALLPESDQTEPVDPDPNPSDSPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTPATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGENGQLRVGVRRIAKQHSPMPSSVISSQSMHLGVLATASHAVMTRTMFVVYYKPRTSQFIVGLNKYLEAVNNHKFSVGMRFKMRFEGEDSPERRFSGTIVGVGDVSAGWSNSHWRSLKVQWDEAATIPRPERVSSWEIEPFIASPTLNVTQTSVKSKRSRPTDVSSCGFWYPGSSQAHEHTQLTGAAELQGKESQIVSSRVLVEGIWPNSPHLNVTSNPYANTNIASRPSDGLTCDRVEDPKKNENPLDCWLFGVNLNNKNKSCNVNSCLEKELGCPSLNIVTTSGPKESIILTTNACETEKVQSPNYSLSNKGQQKKIISDASPNEWQNKLATVPSMRTRTKVQMEGVAVGRALDLTMLNGYDELIDEVEKLFDIKGELRSQNKWRVTFTDNENDMMLVGDDPWPEFCNMVKKIFICSNEELKKMKCKLPNSSLEIEETLLSLDSQNRDENQQIHVT*