AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1176590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176590 MtrunA17_Chr8g0346711 98.523 677 10 0 1 677 1 677 0.0 1398
Msa1176590 MtrunA17_Chr7g0239061 54.810 686 249 14 24 665 9 677 0.0 701
Msa1176590 MtrunA17_Chr4g0009751 57.853 624 218 12 28 625 18 622 0.0 656
Msa1176590 MtrunA17_Chr2g0276781 52.469 648 268 13 20 649 14 639 0.0 626
Msa1176590 MtrunA17_Chr8g0385791 63.636 363 126 5 10 367 39 400 2.99e-157 474
Msa1176590 MtrunA17_Chr8g0385791 40.212 189 91 5 468 645 621 798 3.28e-28 120
Msa1176590 MtrunA17_Chr5g0433301 48.214 392 187 6 8 394 3 383 1.30e-113 361
Msa1176590 MtrunA17_Chr5g0433301 43.038 79 43 1 569 645 725 803 1.18e-14 77.8
Msa1176590 MtrunA17_Chr3g0109391 49.733 374 172 6 26 394 23 385 1.51e-113 361
Msa1176590 MtrunA17_Chr3g0109391 42.697 89 48 2 559 645 724 811 4.20e-14 76.3
Msa1176590 MtrunA17_Chr2g0285461 52.907 344 157 4 26 364 20 363 3.40e-113 362
Msa1176590 MtrunA17_Chr2g0285461 43.011 93 50 2 555 645 772 863 6.20e-16 82.0
Msa1176590 MtrunA17_Chr8g0376771 52.210 362 166 5 8 364 3 362 4.08e-113 362
Msa1176590 MtrunA17_Chr8g0376771 31.633 196 98 7 463 645 697 869 1.99e-15 80.5
Msa1176590 MtrunA17_Chr2g0326281 48.819 381 164 9 27 379 54 431 1.78e-110 352
Msa1176590 MtrunA17_Chr2g0326281 51.579 95 45 1 558 651 695 789 1.87e-24 108
Msa1176590 MtrunA17_Chr4g0029671 44.878 410 202 9 27 421 52 452 2.90e-108 345
Msa1176590 MtrunA17_Chr4g0029671 55.056 89 39 1 558 645 663 751 1.37e-24 109
Msa1176590 MtrunA17_Chr1g0156321 51.585 347 163 4 16 358 31 376 3.92e-108 347
Msa1176590 MtrunA17_Chr1g0156321 41.748 103 54 3 545 645 744 842 7.45e-16 81.6
Msa1176590 MtrunA17_Chr4g0046371 47.872 376 154 9 29 378 38 397 1.26e-105 336
Msa1176590 MtrunA17_Chr8g0389081 52.149 349 157 7 22 362 24 370 5.70e-102 335
Msa1176590 MtrunA17_Chr8g0389081 46.154 91 46 2 557 645 984 1073 1.42e-18 90.5
Msa1176590 MtrunA17_Chr2g0282961 46.556 363 172 7 29 377 53 407 1.63e-100 320
Msa1176590 MtrunA17_Chr2g0301251 50.888 338 159 5 29 361 23 358 8.46e-98 325
Msa1176590 MtrunA17_Chr2g0301251 44.681 94 49 2 557 648 985 1077 2.88e-18 89.7
Msa1176590 MtrunA17_Chr4g0070181 51.032 339 157 7 29 361 23 358 1.86e-95 318
Msa1176590 MtrunA17_Chr4g0070181 46.154 91 46 2 557 645 993 1082 1.55e-18 90.5
Msa1176590 MtrunA17_Chr4g0028971 30.295 713 371 20 16 646 3 671 1.30e-70 243
Msa1176590 MtrunA17_Chr2g0326761 39.633 381 179 11 21 358 3 375 2.13e-66 231
Msa1176590 MtrunA17_Chr1g0181211 36.500 400 199 8 29 379 27 420 8.64e-64 224
Msa1176590 MtrunA17_Chr1g0199681 37.280 397 197 10 26 379 91 478 1.05e-60 216
Msa1176590 MtrunA17_Chr7g0264171 34.793 411 206 10 23 379 25 427 3.34e-59 210
Msa1176590 MtrunA17_Chr3g0115271 35.385 390 208 10 26 377 16 399 5.60e-56 200
Msa1176590 MtrunA17_Chr5g0417281 36.031 383 199 13 14 380 2 354 7.46e-56 199
Msa1176590 MtrunA17_Chr7g0264161 39.482 309 171 8 38 338 1 301 3.31e-55 190
Msa1176590 MtrunA17_Chr5g0424931 31.797 434 225 13 29 404 19 439 5.80e-54 193
Msa1176590 MtrunA17_Chr8g0356211 43.777 233 119 7 139 366 2 227 2.01e-53 186
Msa1176590 MtrunA17_Chr5g0436761 33.333 345 211 8 29 366 12 344 1.80e-50 182
Msa1176590 MtrunA17_Chr1g0178011 32.653 343 218 8 29 366 12 346 1.65e-47 174
Msa1176590 MtrunA17_Chr2g0289221 36.335 322 173 11 29 338 20 321 2.37e-46 168
Msa1176590 MtrunA17_Chr5g0417211 31.880 367 204 13 29 375 12 352 7.15e-40 151
Msa1176590 MtrunA17_Chr2g0277461 27.949 390 256 8 29 404 13 391 8.52e-39 149
Msa1176590 MtrunA17_Chr5g0424801 29.412 340 218 9 29 360 12 337 1.65e-35 138
Msa1176590 MtrunA17_Chr5g0425661 35.567 194 117 2 29 219 37 225 1.24e-34 132
Msa1176590 MtrunA17_Chr2g0277531 29.299 314 194 9 26 328 17 313 2.00e-34 133
Msa1176590 MtrunA17_Chr5g0425261 29.480 346 221 10 29 365 12 343 3.63e-34 134
Msa1176590 MtrunA17_Chr5g0424741 27.446 368 224 12 29 360 12 372 6.62e-34 136
Msa1176590 MtrunA17_Chr1g0156301 37.838 111 48 4 545 652 167 259 4.46e-12 67.0
Msa1176590 MtrunA17_Chr1g0193861 37.349 83 45 1 561 636 86 168 3.16e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176590 AT4G23980.2 56.309 634 229 16 26 645 9 608 0.0 655
Msa1176590 AT4G23980.1 56.044 637 228 15 26 645 9 610 0.0 654
Msa1176590 AT2G46530.1 53.492 673 232 13 1 668 1 597 0.0 652
Msa1176590 AT3G61830.1 54.219 640 221 9 23 658 19 590 0.0 652
Msa1176590 AT2G46530.3 54.058 653 229 12 20 668 33 618 0.0 649
Msa1176590 AT3G61830.2 53.213 607 212 9 56 658 1 539 0.0 595
Msa1176590 AT1G59750.4 49.924 657 284 13 8 648 1 628 0.0 587
Msa1176590 AT1G59750.2 49.772 659 284 13 8 648 1 630 0.0 585
Msa1176590 AT1G59750.1 49.547 662 284 13 8 648 1 633 0.0 585
Msa1176590 AT1G59750.3 49.547 662 284 13 8 648 1 633 0.0 585
Msa1176590 AT1G35540.1 47.105 639 270 15 26 653 24 605 0.0 541
Msa1176590 AT2G46530.2 52.220 563 197 11 110 668 16 510 1.13e-178 518
Msa1176590 AT1G34410.1 46.338 628 272 14 26 643 24 596 1.01e-174 512
Msa1176590 AT1G34310.1 46.926 618 269 16 26 636 24 589 1.10e-172 506
Msa1176590 AT1G35520.1 45.177 622 274 12 26 636 24 589 3.85e-171 502
Msa1176590 AT1G35240.1 45.367 626 267 14 26 643 24 582 6.55e-171 501
Msa1176590 AT1G34390.1 46.785 622 262 13 26 636 24 587 1.65e-169 498
Msa1176590 AT5G62000.2 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1176590 AT5G62000.2 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1176590 AT5G62000.5 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1176590 AT5G62000.5 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1176590 AT5G62000.3 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1176590 AT5G62000.3 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1176590 AT5G62000.1 64.756 349 112 5 26 367 58 402 1.42e-159 481
Msa1176590 AT5G62000.1 53.846 91 41 1 556 645 731 821 2.21e-25 112
Msa1176590 AT5G62000.4 64.756 349 112 5 26 367 58 402 3.83e-159 480
Msa1176590 AT5G62000.4 53.846 91 41 1 556 645 731 821 2.98e-25 112
Msa1176590 AT1G34170.1 42.500 480 245 12 26 493 22 482 8.86e-124 377
Msa1176590 AT5G37020.2 52.326 344 159 4 26 364 19 362 2.05e-113 359
Msa1176590 AT5G37020.1 52.326 344 159 4 26 364 19 362 4.91e-113 359
Msa1176590 AT5G37020.1 42.529 87 47 2 561 645 708 793 1.84e-13 74.3
Msa1176590 AT5G60450.2 49.454 366 167 8 26 377 38 399 2.20e-110 351
Msa1176590 AT5G60450.2 55.056 89 39 1 556 643 639 727 1.17e-23 107
Msa1176590 AT5G60450.1 49.454 366 167 8 26 377 62 423 3.53e-110 351
Msa1176590 AT5G60450.1 55.056 89 39 1 556 643 663 751 1.26e-23 107
Msa1176590 AT1G34170.2 40.292 479 231 11 26 493 22 456 1.62e-109 340
Msa1176590 AT1G30330.1 50.689 363 171 6 8 364 3 363 3.66e-109 352
Msa1176590 AT1G30330.1 39.785 93 53 2 555 645 791 882 1.69e-14 77.8
Msa1176590 AT1G30330.3 51.884 345 159 5 26 364 22 365 5.10e-109 352
Msa1176590 AT1G30330.3 39.785 93 53 2 555 645 793 884 1.65e-14 77.8
Msa1176590 AT1G30330.2 51.884 345 159 5 26 364 22 365 5.10e-109 352
Msa1176590 AT1G30330.2 39.785 93 53 2 555 645 793 884 1.65e-14 77.8
Msa1176590 AT1G19850.2 50.432 347 165 5 18 358 32 377 9.66e-108 347
Msa1176590 AT1G19850.2 42.105 114 58 5 545 653 771 881 9.31e-16 82.0
Msa1176590 AT1G19850.1 50.432 347 165 5 18 358 43 388 9.75e-108 347
Msa1176590 AT1G19850.1 42.105 114 58 5 545 653 782 892 9.54e-16 82.0
Msa1176590 AT1G34170.3 40.959 459 218 11 26 476 22 435 4.74e-106 333
Msa1176590 AT1G34170.3 64.773 88 31 0 561 648 436 523 5.31e-33 134
Msa1176590 AT2G33860.1 47.674 344 159 7 29 359 54 389 1.77e-100 320
Msa1176590 AT1G19220.1 50.147 339 160 7 29 361 23 358 2.82e-92 309
Msa1176590 AT1G19220.1 48.352 91 44 2 557 645 957 1046 7.42e-20 95.1
Msa1176590 AT5G20730.2 48.148 351 157 7 25 361 20 359 6.03e-91 307
Msa1176590 AT5G20730.2 46.154 91 46 2 557 645 1036 1125 8.91e-19 91.7
Msa1176590 AT5G20730.3 48.011 352 157 7 25 361 20 360 1.29e-90 306
Msa1176590 AT5G20730.3 46.154 91 46 2 557 645 1037 1126 9.66e-19 91.7
Msa1176590 AT5G20730.1 48.011 352 157 7 25 361 20 360 1.49e-90 306
Msa1176590 AT5G20730.1 46.154 91 46 2 557 645 1037 1126 8.92e-19 91.7
Msa1176590 AT5G37020.3 56.790 243 102 2 125 364 25 267 2.55e-84 280
Msa1176590 AT5G37020.3 43.023 86 46 2 562 645 614 698 1.70e-13 74.3
Msa1176590 AT2G33860.2 51.724 232 108 3 131 359 2 232 4.02e-74 246
Msa1176590 AT1G43950.1 55.122 205 86 4 26 230 24 222 8.05e-70 227
Msa1176590 AT4G30080.1 39.378 386 177 11 19 358 9 383 1.45e-65 229
Msa1176590 AT2G28350.2 38.806 402 188 12 29 380 10 403 2.17e-65 228
Msa1176590 AT2G28350.1 38.554 415 192 13 16 380 2 403 2.57e-65 229
Msa1176590 AT1G77850.1 33.780 373 188 11 30 358 20 377 1.70e-49 182
Msa1176590 AT1G77850.2 33.780 373 188 11 30 358 20 377 2.25e-49 182
Msa1176590 AT3G62100.1 36.842 95 52 2 548 636 74 166 1.79e-11 63.5
Msa1176590 AT3G16500.2 35.185 108 51 3 561 649 154 261 2.67e-11 65.1
Msa1176590 AT5G25890.1 35.065 77 50 0 561 637 83 159 4.85e-11 62.4
Msa1176590 AT3G17600.1 38.554 83 47 2 561 640 75 156 7.20e-11 61.6

Find 162 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTAGATTGTTGGTTATT+TGG 0.113239 8_1:-8679327 Msa1176590:CDS
ACATTACAACTTCAAAATTA+TGG 0.170359 8_1:-8677679 Msa1176590:three_prime_UTR
CAATTAGAGTACCTTCTTTC+AGG 0.175630 8_1:+8680283 None:intergenic
GTTCGGCAGCACCGGTTAAT+TGG 0.204175 8_1:+8679523 None:intergenic
CTGGCACTATTGTTGGGGTT+GGG 0.225274 8_1:-8680001 Msa1176590:CDS
GAGAAATTATTTGATATTAA+AGG 0.227087 8_1:-8678115 Msa1176590:CDS
CTTGACTTAACCATGTTAAA+TGG 0.228353 8_1:-8678163 Msa1176590:CDS
TGTTGGTTTGAATAAGTATT+TGG 0.232129 8_1:-8680374 Msa1176590:CDS
ACATTCAAATGTGGTGAATT+AGG 0.237390 8_1:+8679444 None:intergenic
GGTAAGGATAATAGATTCTT+TGG 0.239075 8_1:+8679206 None:intergenic
TGGATTCGTTCAGGTTCTTT+TGG 0.240408 8_1:-8682868 Msa1176590:five_prime_UTR
TCCCATGAAGAAACTCTTTC+TGG 0.255185 8_1:+8679815 None:intergenic
ATGCATTTCCCTATCTATAA+TGG 0.270464 8_1:-8677564 Msa1176590:three_prime_UTR
TCAATCTCTAATGAAGAATT+AGG 0.281097 8_1:+8677831 None:intergenic
AGCTCCTGAGTTGGAGTTGC+TGG 0.281379 8_1:+8681138 None:intergenic
GAGTCTTGGTGGAAGGAATT+TGG 0.281586 8_1:-8679467 Msa1176590:CDS
AATGAGTGAAACTTCTGTTT+TGG 0.287661 8_1:+8681344 None:intergenic
TTTCTTCTGCTGCCCTTTGT+TGG 0.299837 8_1:+8679134 None:intergenic
TTTGGAGAATCAGAAGGATT+TGG 0.313683 8_1:+8681362 None:intergenic
TCTTGTTGAGAACTTCCTCC+TGG 0.315796 8_1:+8682391 None:intergenic
TGGCACTATTGTTGGGGTTG+GGG 0.317435 8_1:-8680000 Msa1176590:CDS
AAGACAACGACATCACTTAA+AGG 0.318312 8_1:-8682833 Msa1176590:five_prime_UTR
TCTCTCTCATGAGTTATTGA+TGG 0.321161 8_1:-8682533 Msa1176590:five_prime_UTR
CACATCTTGAGTGTAATCTA+AGG 0.329674 8_1:-8682417 Msa1176590:CDS
TTTCTCTGTCTTGGGTTTGT+TGG 0.333715 8_1:+8682689 None:intergenic
CATATTTGTTTACAAGCTAA+TGG 0.335674 8_1:+8677584 None:intergenic
GGAAGTTCTCAACAAGAAAA+AGG 0.336508 8_1:-8682385 Msa1176590:intron
ATCTCCGGCCACCAATCTTT+TGG 0.336866 8_1:+8680863 None:intergenic
AGCTTGTTCTGCCATTCATT+TGG 0.341680 8_1:+8679093 None:intergenic
GAAGAAACTCTTTCTGGTCT+TGG 0.342544 8_1:+8679821 None:intergenic
AAAGTAGGAGATGCTATAAA+AGG 0.345024 8_1:+8679785 None:intergenic
AAATATCTCACATCTGATTC+TGG 0.345650 8_1:+8681557 None:intergenic
TATGAAACAAGAGCAGAAAA+AGG 0.347339 8_1:-8682916 Msa1176590:five_prime_UTR
ACACACAATCCATTATAGAT+AGG 0.364770 8_1:+8677555 None:intergenic
AAAACTCTGTCACCAGTATT+AGG 0.366460 8_1:+8682013 None:intergenic
TGTTCTTTGTTATTGGTGAA+TGG 0.372470 8_1:-8682440 Msa1176590:exon
TCTGGCACTATTGTTGGGGT+TGG 0.378298 8_1:-8680002 Msa1176590:CDS
TTGGTAACGTGGATTCGTTC+AGG 0.379348 8_1:-8682877 Msa1176590:five_prime_UTR
CTCGTGAGCTTGGGATGATC+CGG 0.387011 8_1:+8679551 None:intergenic
CTTGTTGAGAACTTCCTCCT+GGG 0.389724 8_1:+8682392 None:intergenic
GCGATGTTTGTGTTAGCATA+AGG 0.391550 8_1:+8679411 None:intergenic
TCTATTAGTGGCTACTTTCA+AGG 0.396077 8_1:-8682505 Msa1176590:five_prime_UTR
TTCGGCAGCACCGGTTAATT+GGG 0.399794 8_1:+8679524 None:intergenic
CACTGATCAGGAATTGAATC+AGG 0.404063 8_1:-8681799 Msa1176590:CDS
GCACGCCAAGATGCATGCTT+TGG 0.405641 8_1:+8680572 None:intergenic
ATTGGGTATGCTCGTGAGCT+TGG 0.408537 8_1:+8679541 None:intergenic
TACCTTAGTCCTTGTTCTCA+TGG 0.418020 8_1:+8679056 None:intergenic
ACTCTCCTTGCCTTGGAGTT+CGG 0.421181 8_1:+8679506 None:intergenic
TGAGTCTAGATTCACAGAAT+AGG 0.424499 8_1:-8677797 Msa1176590:CDS
TGTCGTCAATATTCAGTTGT+TGG 0.424519 8_1:-8681736 Msa1176590:intron
GGGGTTGGGGATGTTTCTGC+AGG 0.425128 8_1:-8679987 Msa1176590:CDS
GACCAGAAAGAGTTTCTTCA+TGG 0.425372 8_1:-8679817 Msa1176590:CDS
CTCTCTCATGAGTTATTGAT+GGG 0.426917 8_1:-8682532 Msa1176590:five_prime_UTR
ACGAGAATCCTCTAGATTGT+TGG 0.427471 8_1:-8679335 Msa1176590:CDS
GAGTCTAGATTCACAGAATA+GGG 0.429663 8_1:-8677796 Msa1176590:CDS
TTGATGGGTTAATCTATTAG+TGG 0.430755 8_1:-8682517 Msa1176590:five_prime_UTR
GAAGTTGTGTGCAGGACCTT+TGG 0.431799 8_1:-8682044 Msa1176590:CDS
GCCTTGGAGTTCGGCAGCAC+CGG 0.433432 8_1:+8679515 None:intergenic
TTGTTGGACAGTGAATAGTT+AGG 0.435729 8_1:+8679150 None:intergenic
ATGATTTGTATGAAGAGTTA+TGG 0.440189 8_1:-8682066 Msa1176590:CDS
AATTATGGACTACATGAAGT+TGG 0.443341 8_1:-8677664 Msa1176590:three_prime_UTR
AGGACTAGTCAGTTTATTGT+TGG 0.445609 8_1:-8680391 Msa1176590:CDS
CAGTGAAAAGCAAAAGATCT+AGG 0.447954 8_1:-8679745 Msa1176590:CDS
CGATGTTTGTGTTAGCATAA+GGG 0.449060 8_1:+8679412 None:intergenic
TTGGTGGATGTTCCTAATAC+TGG 0.450168 8_1:-8682025 Msa1176590:CDS
TTTCACATGCATTGGTGGTA+AGG 0.453304 8_1:+8679190 None:intergenic
GTAAGGATAATAGATTCTTT+GGG 0.458740 8_1:+8679207 None:intergenic
TTGGGGATGTTTCTGCAGGA+TGG 0.464475 8_1:-8679983 Msa1176590:CDS
ATTTGTCGCATCCAAAAGAT+TGG 0.466204 8_1:-8680874 Msa1176590:CDS
TTCTCACTGGAGATCATTGA+AGG 0.467761 8_1:-8679955 Msa1176590:intron
CTAGCAGCAAAGGATCTTCA+TGG 0.467822 8_1:-8681117 Msa1176590:CDS
GATTGTTAGCTCTAGAGTCT+TGG 0.470460 8_1:-8679481 Msa1176590:CDS
TTCAGTTTCACATGCATTGG+TGG 0.470670 8_1:+8679185 None:intergenic
CACGAGCATACCCAATTAAC+CGG 0.472338 8_1:-8679534 Msa1176590:CDS
TTGGGTATGCTCGTGAGCTT+GGG 0.472365 8_1:+8679542 None:intergenic
GTTGTAAGCAAGTGCCTCCT+TGG 0.473074 8_1:+8680909 None:intergenic
GAATCAGAAGGATTTGGATC+AGG 0.474760 8_1:+8681368 None:intergenic
TTAAACATTGTTACTACAAG+TGG 0.477123 8_1:-8679231 Msa1176590:CDS
GGATTTGGATCAGGATCTAC+AGG 0.478045 8_1:+8681377 None:intergenic
TACCGAGTGCTTGCCTCCAT+TGG 0.478046 8_1:-8681255 Msa1176590:intron
AGGCAACAACGTTGGGAAGT+TGG 0.479657 8_1:-8682896 Msa1176590:five_prime_UTR
GCTGCAAGCATCCACTGATC+AGG 0.479756 8_1:-8681811 Msa1176590:CDS
TTAGTCCTTGTTCTCATGGA+TGG 0.481222 8_1:+8679060 None:intergenic
CTGATTCAATTCCTGATCAG+TGG 0.488028 8_1:+8681800 None:intergenic
CTACTTTCCTCAAGGTCACA+TGG 0.489690 8_1:-8681990 Msa1176590:CDS
AGTTACGTTCACAAAACAAA+TGG 0.489755 8_1:-8678090 Msa1176590:CDS
TGGCTTGATATCACAGATGA+AGG 0.497591 8_1:+8680592 None:intergenic
GTAGTAACAATGTTTAAACT+TGG 0.504684 8_1:+8679237 None:intergenic
CAATGCATGTGAAACTGAAA+AGG 0.505554 8_1:-8679181 Msa1176590:CDS
GACACCAGCAACTCCAACTC+AGG 0.508014 8_1:-8681142 Msa1176590:CDS
GGCACTTGCTTACAACCGGC+TGG 0.513461 8_1:-8680902 Msa1176590:CDS
AAGAAGAAGATGAAAGAAGA+AGG 0.518058 8_1:+8682481 None:intergenic
CAATCTGACTCTCCTTGCCT+TGG 0.518741 8_1:+8679499 None:intergenic
ATTGATGTTACTTACGGCCA+TGG 0.518924 8_1:+8678016 None:intergenic
AGGAGGCACTTGCTTACAAC+CGG 0.519222 8_1:-8680906 Msa1176590:CDS
TAGGAAAACAAAAGCATCTC+CGG 0.521346 8_1:+8680848 None:intergenic
CAGGATGGTCAAATTCTCAC+TGG 0.521550 8_1:-8679968 Msa1176590:CDS
GTTGTGTGCAGGACCTTTGG+TGG 0.521957 8_1:-8682041 Msa1176590:CDS
ATCGTTGTAGGGGAGAGAAC+GGG 0.522255 8_1:-8680663 Msa1176590:intron
AACTCAGGAGCTAGCAGCAA+AGG 0.522935 8_1:-8681127 Msa1176590:CDS
TTTGCTGCTAGCTCCTGAGT+TGG 0.523480 8_1:+8681129 None:intergenic
CACACAATCCATTATAGATA+GGG 0.525697 8_1:+8677556 None:intergenic
TGTTAGCTCTAGAGTCTTGG+TGG 0.526901 8_1:-8679478 Msa1176590:CDS
GAAAATGACATGATGCTTGT+CGG 0.530219 8_1:-8678046 Msa1176590:CDS
TCAAGCCAAAGCATGCATCT+TGG 0.530849 8_1:-8680577 Msa1176590:CDS
CTGATGCATCACCAAATGAA+TGG 0.532983 8_1:-8679104 Msa1176590:CDS
TTGTTGAGAACTTCCTCCTG+GGG 0.535275 8_1:+8682393 None:intergenic
ATCCATGAGAACAAGGACTA+AGG 0.547818 8_1:-8679058 Msa1176590:intron
GTTTGAGTGACATTCAAAGT+AGG 0.548095 8_1:+8679770 None:intergenic
ACTATTCACTGTCCAACAAA+GGG 0.548112 8_1:-8679146 Msa1176590:CDS
GAGTGTAATCTAAGGGCCCC+AGG 0.550495 8_1:-8682409 Msa1176590:CDS
AAATGAATGGCAGAACAAGC+TGG 0.554989 8_1:-8679091 Msa1176590:CDS
GATCGTTGTAGGGGAGAGAA+CGG 0.555589 8_1:-8680664 Msa1176590:intron
GGCAACTGAGAGTTGGCGTT+AGG 0.557425 8_1:-8680642 Msa1176590:CDS
TGCGACAAATGTACTCCAGC+CGG 0.557664 8_1:+8680887 None:intergenic
TGGTTTGAATAAGTATTTGG+AGG 0.558023 8_1:-8680371 Msa1176590:CDS
TCGCATGTGAGGCCATCGCT+CGG 0.560120 8_1:+8679381 None:intergenic
GTTTGTGTTAGCATAAGGGT+TGG 0.562713 8_1:+8679416 None:intergenic
CCTACCGATGTTTCATCTTG+CGG 0.563143 8_1:-8679722 Msa1176590:intron
GAGAGGACTCACCTGAAAGA+AGG 0.565238 8_1:-8680294 Msa1176590:intron
TGTCGCATCCAAAAGATTGG+TGG 0.567249 8_1:-8680871 Msa1176590:CDS
CTGTACCATCCATGAGAACA+AGG 0.567765 8_1:-8679065 Msa1176590:CDS
TGCTGCCGAACTCCAAGGCA+AGG 0.568457 8_1:-8679511 Msa1176590:CDS
AACTATTCACTGTCCAACAA+AGG 0.576812 8_1:-8679147 Msa1176590:CDS
ACCGGTGCTGCCGAACTCCA+AGG 0.581658 8_1:-8679516 Msa1176590:CDS
AGCTCTAGAGTCTTGGTGGA+AGG 0.588538 8_1:-8679474 Msa1176590:CDS
AGGATCTTCATGGATTTGAG+TGG 0.588735 8_1:-8681107 Msa1176590:CDS
CAACGACATCACTTAAAGGA+AGG 0.591081 8_1:-8682829 Msa1176590:five_prime_UTR
TCGTGAGCTTGGGATGATCC+GGG 0.591691 8_1:+8679552 None:intergenic
TACCAATGGAGGCAAGCACT+CGG 0.591772 8_1:+8681253 None:intergenic
GAGAACGGGCAACTGAGAGT+TGG 0.593646 8_1:-8680649 Msa1176590:CDS
ACCAGAAAGAGTTTCTTCAT+GGG 0.596388 8_1:-8679816 Msa1176590:CDS
TTTGAGAAGGTGCAAATGGA+AGG 0.597190 8_1:-8678205 Msa1176590:intron
AAGTTTAAACACATATATAG+AGG 0.597684 8_1:-8681084 Msa1176590:intron
TCGTCGTTTATTACAAACCA+AGG 0.600362 8_1:-8680510 Msa1176590:intron
ACATCTTGAGTGTAATCTAA+GGG 0.603165 8_1:-8682416 Msa1176590:CDS
CCAAATAACCAACAATCTAG+AGG 0.603997 8_1:+8679327 None:intergenic
TGCTTGTCGGTGATGATCCA+TGG 0.605617 8_1:-8678033 Msa1176590:CDS
ACTTGTTCCATGTGACCTTG+AGG 0.607836 8_1:+8681983 None:intergenic
AGATTCAAGATGAGATTCGA+AGG 0.609071 8_1:-8680316 Msa1176590:CDS
GATATCACAGATGAAGGCAT+AGG 0.610881 8_1:+8680598 None:intergenic
GCATCCAAAAGATTGGTGGC+CGG 0.615102 8_1:-8680867 Msa1176590:CDS
GGTAAGAAAATTACCAATGG+AGG 0.617017 8_1:+8681242 None:intergenic
TTGGAAGTTACATTCAAATG+TGG 0.618182 8_1:+8679435 None:intergenic
CAAGATGAGATTCGAAGGAG+AGG 0.618652 8_1:-8680311 Msa1176590:CDS
GAGTTATGGAAGTTGTGTGC+AGG 0.618746 8_1:-8682052 Msa1176590:CDS
TTCGACGGTAAATTGAAATG+TGG 0.618876 8_1:+8681771 None:intergenic
GCATCTGATACTAGCACACA+TGG 0.620237 8_1:-8681305 Msa1176590:CDS
TTCATCATAACCATTTAACA+TGG 0.625773 8_1:+8678153 None:intergenic
TTTGTAATAAACGACGAACA+TGG 0.635651 8_1:+8680516 None:intergenic
ATCGCATCTAGACCGAGCGA+TGG 0.639085 8_1:-8679393 Msa1176590:CDS
TACTGTGATCAGGTCAACCA+AGG 0.641842 8_1:-8680926 Msa1176590:intron
ACACGGCATAAAATCTTCGA+CGG 0.643988 8_1:+8681756 None:intergenic
CAAATGGAAGGTGTAGCTGT+TGG 0.654600 8_1:-8678193 Msa1176590:CDS
ACAACTGAATATTGACGACA+CGG 0.657736 8_1:+8681739 None:intergenic
CGCACCGCAAGATGAAACAT+CGG 0.662128 8_1:+8679718 None:intergenic
CCGCAAGATGAAACATCGGT+AGG 0.673349 8_1:+8679722 None:intergenic
GTATTAGGAACATCCACCAA+AGG 0.686860 8_1:+8682028 None:intergenic
ACGTTGGGAAGTTGGTAACG+TGG 0.694796 8_1:-8682888 Msa1176590:five_prime_UTR
TCTGATACTAGCACACATGG+TGG 0.705702 8_1:-8681302 Msa1176590:CDS
TGTGATCAGGTCAACCAAGG+AGG 0.725688 8_1:-8680923 Msa1176590:intron
TGTAATCTAAGGGCCCCAGG+AGG 0.747523 8_1:-8682406 Msa1176590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAACTACTAAAATA+TGG - chr8_1:8682097-8682116 Msa1176590:intron 10.0%
!! AAAAAAAACATTATAGGATT+TGG + chr8_1:8677879-8677898 None:intergenic 15.0%
!! AGTTACAAAAAAAACATTAT+AGG + chr8_1:8677885-8677904 None:intergenic 15.0%
!!! TTTTTGTTTATGTATATTGT+AGG - chr8_1:8679367-8679386 Msa1176590:CDS 15.0%
!!! GTAATTTATTGCATTTTATT+AGG - chr8_1:8680061-8680080 Msa1176590:intron 15.0%
!!! TTAAAAATTTCACAAACTTT+TGG + chr8_1:8680094-8680113 None:intergenic 15.0%
!!! TTTATACTTTTATTACACTA+AGG + chr8_1:8681520-8681539 None:intergenic 15.0%
!! GAAAAAAAAGAAAATGAAAT+TGG - chr8_1:8681586-8681605 Msa1176590:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr8_1:8681739-8681758 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr8_1:8681740-8681759 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+AGG + chr8_1:8681803-8681822 None:intergenic 15.0%
!!! TTTATTTTAGTTCTTATGTA+GGG + chr8_1:8682086-8682105 None:intergenic 15.0%
!! TAAAAAATTGTATATTTGCA+TGG - chr8_1:8682178-8682197 Msa1176590:intron 15.0%
!! TTGTTTATCTATTAATTTCA+AGG + chr8_1:8682222-8682241 None:intergenic 15.0%
!! AACAAGAAAAATATTTGAAA+TGG + chr8_1:8682311-8682330 None:intergenic 15.0%
!! GAGAAATTATTTGATATTAA+AGG - chr8_1:8682421-8682440 Msa1176590:CDS 15.0%
!!! TGAATATCCTTTTTTTTTTT+TGG - chr8_1:8682914-8682933 Msa1176590:five_prime_UTR 15.0%
!!! GAATATCCTTTTTTTTTTTT+GGG - chr8_1:8682915-8682934 Msa1176590:five_prime_UTR 15.0%
!!! TCATATTTTATTACTCTCTT+TGG - chr8_1:8678196-8678215 Msa1176590:CDS 20.0%
!!! TATCAAACTTTTTAGTCTTT+TGG - chr8_1:8678682-8678701 Msa1176590:intron 20.0%
!!! ATCAAACTTTTTAGTCTTTT+GGG - chr8_1:8678683-8678702 Msa1176590:intron 20.0%
!!! GATGTTTTTTTTTTGTTTGT+AGG - chr8_1:8678912-8678931 Msa1176590:intron 20.0%
!! AAGTTTAAACACATATATAG+AGG - chr8_1:8679452-8679471 Msa1176590:CDS 20.0%
!!! TTCATAATCAAATTTTCGAA+TGG - chr8_1:8679524-8679543 Msa1176590:CDS 20.0%
!! TAAATATCAACTTACAACAA+AGG + chr8_1:8680487-8680506 None:intergenic 20.0%
!! TGTATACAATTAACAGAAAA+TGG + chr8_1:8680633-8680652 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr8_1:8681670-8681689 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr8_1:8681706-8681725 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr8_1:8681707-8681726 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr8_1:8681780-8681799 None:intergenic 20.0%
!! CAACATAGATTAAATTCAAA+GGG + chr8_1:8682022-8682041 None:intergenic 20.0%
!! TCAACATAGATTAAATTCAA+AGG + chr8_1:8682023-8682042 None:intergenic 20.0%
!! CAAATAGTCAACATATTATA+GGG + chr8_1:8682052-8682071 None:intergenic 20.0%
!! TCAAATAGTCAACATATTAT+AGG + chr8_1:8682053-8682072 None:intergenic 20.0%
!!! TTATTTTAGTTCTTATGTAG+GGG + chr8_1:8682085-8682104 None:intergenic 20.0%
!!! GTTTATTTTAGTTCTTATGT+AGG + chr8_1:8682087-8682106 None:intergenic 20.0%
!!! TATTTTTCTTGTTTTTGAGA+AGG - chr8_1:8682318-8682337 Msa1176590:intron 20.0%
!! ACATTACAACTTCAAAATTA+TGG - chr8_1:8682857-8682876 Msa1176590:five_prime_UTR 20.0%
! AAAACAACTCTTCAAAAAGT+TGG - chr8_1:8677736-8677755 Msa1176590:three_prime_UTR 25.0%
! CAGTTACACACATAAAAATA+AGG + chr8_1:8677935-8677954 None:intergenic 25.0%
!!! GTTGTTTTGTTCTTTGTTAT+TGG - chr8_1:8678089-8678108 Msa1176590:CDS 25.0%
! AGAAAAAGGTCAATAATTTG+TGG - chr8_1:8678165-8678184 Msa1176590:CDS 25.0%
! TCTATGTTCATAAGGTAAAA+GGG + chr8_1:8678330-8678349 None:intergenic 25.0%
!!! ACTTTTTCAGAAACAAATCA+AGG - chr8_1:8678377-8678396 Msa1176590:intron 25.0%
!!! CTTTTTCAGAAACAAATCAA+GGG - chr8_1:8678378-8678397 Msa1176590:intron 25.0%
!!! TTTTTTTCTTGTGTTTTTGC+AGG - chr8_1:8678436-8678455 Msa1176590:intron 25.0%
!! ATGATTTGTATGAAGAGTTA+TGG - chr8_1:8678470-8678489 Msa1176590:intron 25.0%
! TACAAACTAGAACACAAAAA+TGG + chr8_1:8678617-8678636 None:intergenic 25.0%
! ATATTCCATGTTGAAAAGTT+AGG - chr8_1:8679066-8679085 Msa1176590:CDS 25.0%
! AAAATCAGAGAACGAAAATA+AGG + chr8_1:8679501-8679520 None:intergenic 25.0%
! GCAGAAAAGAAAATTATACA+AGG + chr8_1:8679729-8679748 None:intergenic 25.0%
! AAGATTCATTATCTAAGCTT+TGG - chr8_1:8679840-8679859 Msa1176590:CDS 25.0%
!!! TGTTGGTTTGAATAAGTATT+TGG - chr8_1:8680162-8680181 Msa1176590:intron 25.0%
!! AACAATCATAAGTTTTCTGT+TGG - chr8_1:8680193-8680212 Msa1176590:intron 25.0%
!!! CTGTTTTTAAGTTCAAATGA+GGG - chr8_1:8680426-8680445 Msa1176590:intron 25.0%
!! GATTATTTGATCAGATTTTC+TGG - chr8_1:8680516-8680535 Msa1176590:CDS 25.0%
! CAGAAAATGGAAATAAAGAT+AGG + chr8_1:8680620-8680639 None:intergenic 25.0%
!! AAAAGTTTTACATGCTCAAA+TGG + chr8_1:8680658-8680677 None:intergenic 25.0%
! TCATGTTTAGAAAAAGAACT+TGG - chr8_1:8681272-8681291 Msa1176590:CDS 25.0%
! GTAGTAACAATGTTTAAACT+TGG + chr8_1:8681302-8681321 None:intergenic 25.0%
! TTAAACATTGTTACTACAAG+TGG - chr8_1:8681305-8681324 Msa1176590:CDS 25.0%
! GTAAGGATAATAGATTCTTT+GGG + chr8_1:8681332-8681351 None:intergenic 25.0%
!! AAAGATTCCTTTCACATTTT+AGG - chr8_1:8681545-8681564 Msa1176590:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr8_1:8681671-8681690 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr8_1:8681781-8681800 None:intergenic 25.0%
! TGTATAAATAAAGAGGAAAG+TGG + chr8_1:8681796-8681815 None:intergenic 25.0%
! CCTAGTTTCAAAGAAAATAT+TGG + chr8_1:8681948-8681967 None:intergenic 25.0%
!!! CCAATATTTTCTTTGAAACT+AGG - chr8_1:8681945-8681964 Msa1176590:intron 25.0%
!!! TATTTTAGTTCTTATGTAGG+GGG + chr8_1:8682084-8682103 None:intergenic 25.0%
! CAAGGTTTAAATGTGTATTT+AGG + chr8_1:8682204-8682223 None:intergenic 25.0%
!!! ATCAAAGTTTTTCAGATTCA+AGG + chr8_1:8682280-8682299 None:intergenic 25.0%
! TTCATCATAACCATTTAACA+TGG + chr8_1:8682386-8682405 None:intergenic 25.0%
!! GATTTTCATTTGTTCAAATG+AGG - chr8_1:8682656-8682675 Msa1176590:five_prime_UTR 25.0%
! TCAATCTCTAATGAAGAATT+AGG + chr8_1:8682708-8682727 None:intergenic 25.0%
!!! AAACATGTCACCTTTTTTTT+TGG - chr8_1:8682793-8682812 Msa1176590:five_prime_UTR 25.0%
!!! CTTTTTTTTTGGTTTGAGAA+GGG - chr8_1:8682804-8682823 Msa1176590:five_prime_UTR 25.0%
!!! ATCCTTTTTTTTTTTTGGGT+AGG - chr8_1:8682919-8682938 Msa1176590:five_prime_UTR 25.0%
! CATATTTGTTTACAAGCTAA+TGG + chr8_1:8682955-8682974 None:intergenic 25.0%
TATGAAACAAGAGCAGAAAA+AGG - chr8_1:8677620-8677639 Msa1176590:three_prime_UTR 30.0%
!! ACTCTTCAAAAAGTTGGTTT+TGG - chr8_1:8677742-8677761 Msa1176590:three_prime_UTR 30.0%
!!! CAAAAAGTTGGTTTTGGTTT+TGG - chr8_1:8677748-8677767 Msa1176590:exon 30.0%
!!! GGTTTTTTTTTCTCTGTCTT+GGG + chr8_1:8677858-8677877 None:intergenic 30.0%
!!! TGGTTTTTTTTTCTCTGTCT+TGG + chr8_1:8677859-8677878 None:intergenic 30.0%
! GAGAGTTAAATGCATGTTTT+TGG + chr8_1:8677963-8677982 None:intergenic 30.0%
!! TTGATGGGTTAATCTATTAG+TGG - chr8_1:8678019-8678038 Msa1176590:intron 30.0%
AAGAAGAAGATGAAAGAAGA+AGG + chr8_1:8678058-8678077 None:intergenic 30.0%
!! TGTTCTTTGTTATTGGTGAA+TGG - chr8_1:8678096-8678115 Msa1176590:CDS 30.0%
ACATCTTGAGTGTAATCTAA+GGG - chr8_1:8678120-8678139 Msa1176590:CDS 30.0%
! AAAGGTCAATAATTTGTGGT+TGG - chr8_1:8678169-8678188 Msa1176590:CDS 30.0%
CTCTATGTTCATAAGGTAAA+AGG + chr8_1:8678331-8678350 None:intergenic 30.0%
! CTTTTACCTTATGAACATAG+AGG - chr8_1:8678329-8678348 Msa1176590:intron 30.0%
TTTCTTCCTCTATGTTCATA+AGG + chr8_1:8678338-8678357 None:intergenic 30.0%
TGTAATGTAAACACAACAAG+AGG + chr8_1:8678841-8678860 None:intergenic 30.0%
CACAACAAAAAACACATACA+AGG + chr8_1:8678867-8678886 None:intergenic 30.0%
AAATATCTCACATCTGATTC+TGG + chr8_1:8678982-8679001 None:intergenic 30.0%
! AAAAGCCTAACTTTTCAACA+TGG + chr8_1:8679074-8679093 None:intergenic 30.0%
!!! ACTGTTTCTGAAACTAGTTT+TGG - chr8_1:8679104-8679123 Msa1176590:CDS 30.0%
!!! AAACTAGTTTTGGTTTCTCT+TGG - chr8_1:8679114-8679133 Msa1176590:CDS 30.0%
! AATGAGTGAAACTTCTGTTT+TGG + chr8_1:8679195-8679214 None:intergenic 30.0%
TAGCATCATACAAAGAAACT+CGG + chr8_1:8679318-8679337 None:intergenic 30.0%
AAGGAAAACTTGAATACCTT+AGG + chr8_1:8679710-8679729 None:intergenic 30.0%
TGCTTTCGATGTTATATAGT+TGG - chr8_1:8679746-8679765 Msa1176590:CDS 30.0%
!! GGAGATTTGTTAGATATAGT+TGG - chr8_1:8679767-8679786 Msa1176590:CDS 30.0%
TTTGTAATAAACGACGAACA+TGG + chr8_1:8680023-8680042 None:intergenic 30.0%
ATTACAAAAACTACGAACCT+TGG + chr8_1:8680046-8680065 None:intergenic 30.0%
TGGTTTGAATAAGTATTTGG+AGG - chr8_1:8680165-8680184 Msa1176590:intron 30.0%
TAAACACTTAAGAGACTGTT+TGG + chr8_1:8680403-8680422 None:intergenic 30.0%
CCTCATTTGAACTTAAAAAC+AGG + chr8_1:8680428-8680447 None:intergenic 30.0%
!!! CCTGTTTTTAAGTTCAAATG+AGG - chr8_1:8680425-8680444 Msa1176590:intron 30.0%
TTACATTCTGACCACAATAA+TGG + chr8_1:8680464-8680483 None:intergenic 30.0%
!! TGTAAAACTTTTTGCCACTT+AGG - chr8_1:8680666-8680685 Msa1176590:intron 30.0%
AAAGTAGGAGATGCTATAAA+AGG + chr8_1:8680754-8680773 None:intergenic 30.0%
ACATTCAAATGTGGTGAATT+AGG + chr8_1:8681095-8681114 None:intergenic 30.0%
TTGGAAGTTACATTCAAATG+TGG + chr8_1:8681104-8681123 None:intergenic 30.0%
GGTAAGGATAATAGATTCTT+TGG + chr8_1:8681333-8681352 None:intergenic 30.0%
CATTGACCTCATTTATTCAA+AGG + chr8_1:8681616-8681635 None:intergenic 30.0%
CTTTGAATAAATGAGGTCAA+TGG - chr8_1:8681614-8681633 Msa1176590:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr8_1:8681692-8681711 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr8_1:8681693-8681712 None:intergenic 30.0%
CACTTTGAACTAAATTGTGA+AGG + chr8_1:8681920-8681939 None:intergenic 30.0%
CTTGACTTAACCATGTTAAA+TGG - chr8_1:8682373-8682392 Msa1176590:intron 30.0%
AGTTACGTTCACAAAACAAA+TGG - chr8_1:8682446-8682465 Msa1176590:five_prime_UTR 30.0%
! GCAAAGATTGATGTTACTTA+CGG + chr8_1:8682529-8682548 None:intergenic 30.0%
!! TGCCATATTTTTATACATGC+AGG - chr8_1:8682610-8682629 Msa1176590:five_prime_UTR 30.0%
!! GCCATATTTTTATACATGCA+GGG - chr8_1:8682611-8682630 Msa1176590:five_prime_UTR 30.0%
TCCCTGCATGTATAAAAATA+TGG + chr8_1:8682615-8682634 None:intergenic 30.0%
CCTTCTCAAACCAAAAAAAA+AGG + chr8_1:8682806-8682825 None:intergenic 30.0%
!!! CCTTTTTTTTTGGTTTGAGA+AGG - chr8_1:8682803-8682822 Msa1176590:five_prime_UTR 30.0%
!! AAATGGAGTGCTTGATTTTA+TGG - chr8_1:8682827-8682846 Msa1176590:five_prime_UTR 30.0%
! AATTATGGACTACATGAAGT+TGG - chr8_1:8682872-8682891 Msa1176590:five_prime_UTR 30.0%
! ACTACATGAAGTTGGATTTT+AGG - chr8_1:8682880-8682899 Msa1176590:five_prime_UTR 30.0%
AGCCTACCCAAAAAAAAAAA+AGG + chr8_1:8682924-8682943 None:intergenic 30.0%
ATGCATTTCCCTATCTATAA+TGG - chr8_1:8682972-8682991 Msa1176590:five_prime_UTR 30.0%
CACACAATCCATTATAGATA+GGG + chr8_1:8682983-8683002 None:intergenic 30.0%
ACACACAATCCATTATAGAT+AGG + chr8_1:8682984-8683003 None:intergenic 30.0%
AAGACAACGACATCACTTAA+AGG - chr8_1:8677703-8677722 Msa1176590:three_prime_UTR 35.0%
!!! GTTGGTTTTGGTTTTGGTTT+TGG - chr8_1:8677754-8677773 Msa1176590:exon 35.0%
TCTCTCTCATGAGTTATTGA+TGG - chr8_1:8678003-8678022 Msa1176590:intron 35.0%
CTCTCTCATGAGTTATTGAT+GGG - chr8_1:8678004-8678023 Msa1176590:intron 35.0%
! TCTATTAGTGGCTACTTTCA+AGG - chr8_1:8678031-8678050 Msa1176590:CDS 35.0%
CACATCTTGAGTGTAATCTA+AGG - chr8_1:8678119-8678138 Msa1176590:CDS 35.0%
GGAAGTTCTCAACAAGAAAA+AGG - chr8_1:8678151-8678170 Msa1176590:CDS 35.0%
AAAACTCTGTCACCAGTATT+AGG + chr8_1:8678526-8678545 None:intergenic 35.0%
! AGAGTTTTCTACTTTCCTCA+AGG - chr8_1:8678538-8678557 Msa1176590:intron 35.0%
TTCGACGGTAAATTGAAATG+TGG + chr8_1:8678768-8678787 None:intergenic 35.0%
ACAACTGAATATTGACGACA+CGG + chr8_1:8678800-8678819 None:intergenic 35.0%
TGTCGTCAATATTCAGTTGT+TGG - chr8_1:8678800-8678819 Msa1176590:intron 35.0%
TTTGGAGAATCAGAAGGATT+TGG + chr8_1:8679177-8679196 None:intergenic 35.0%
!!! TTCTGTTTTGGAGAATCAGA+AGG + chr8_1:8679183-8679202 None:intergenic 35.0%
GGTAAGAAAATTACCAATGG+AGG + chr8_1:8679297-8679316 None:intergenic 35.0%
CTCGGTAAGAAAATTACCAA+TGG + chr8_1:8679300-8679319 None:intergenic 35.0%
GATTTGCATTGAATGAGAAG+TGG - chr8_1:8679558-8679577 Msa1176590:CDS 35.0%
ATTTGTCGCATCCAAAAGAT+TGG - chr8_1:8679662-8679681 Msa1176590:intron 35.0%
!! TAGGAAAACAAAAGCATCTC+CGG + chr8_1:8679691-8679710 None:intergenic 35.0%
!!! GAGATGCTTTTGTTTTCCTA+AGG - chr8_1:8679691-8679710 Msa1176590:intron 35.0%
TCGTCGTTTATTACAAACCA+AGG - chr8_1:8680026-8680045 Msa1176590:intron 35.0%
! ACATGTCTTTTGATCCATTC+AGG - chr8_1:8680125-8680144 Msa1176590:intron 35.0%
! ATAAACTGACTAGTCCTGAA+TGG + chr8_1:8680142-8680161 None:intergenic 35.0%
!! AGGACTAGTCAGTTTATTGT+TGG - chr8_1:8680145-8680164 Msa1176590:intron 35.0%
AGATTCAAGATGAGATTCGA+AGG - chr8_1:8680220-8680239 Msa1176590:intron 35.0%
! CAATTAGAGTACCTTCTTTC+AGG + chr8_1:8680256-8680275 None:intergenic 35.0%
!! CTGAAAGAAGGTACTCTAAT+TGG - chr8_1:8680254-8680273 Msa1176590:intron 35.0%
TCAAATGAGGGAATCTAAAC+AGG - chr8_1:8680438-8680457 Msa1176590:intron 35.0%
ATCTAAACAGGCCATTATTG+TGG - chr8_1:8680450-8680469 Msa1176590:intron 35.0%
!! AGATTTTCTGGCACTATTGT+TGG - chr8_1:8680528-8680547 Msa1176590:CDS 35.0%
!! GATTTTCTGGCACTATTGTT+GGG - chr8_1:8680529-8680548 Msa1176590:CDS 35.0%
!! ATTTTCTGGCACTATTGTTG+GGG - chr8_1:8680530-8680549 Msa1176590:CDS 35.0%
!! TTTTTGCCACTTAGGTTCAA+TGG - chr8_1:8680674-8680693 Msa1176590:intron 35.0%
!! TTTTGCCACTTAGGTTCAAT+GGG - chr8_1:8680675-8680694 Msa1176590:intron 35.0%
ACCAGAAAGAGTTTCTTCAT+GGG - chr8_1:8680720-8680739 Msa1176590:intron 35.0%
GTTTGAGTGACATTCAAAGT+AGG + chr8_1:8680769-8680788 None:intergenic 35.0%
CAGTGAAAAGCAAAAGATCT+AGG - chr8_1:8680791-8680810 Msa1176590:intron 35.0%
! TTAGTATTTTCTCGTTCACC+TGG - chr8_1:8680920-8680939 Msa1176590:intron 35.0%
! TAGTATTTTCTCGTTCACCT+GGG - chr8_1:8680921-8680940 Msa1176590:intron 35.0%
CAAAAACCTGAAGCAGTTAT+AGG + chr8_1:8680960-8680979 None:intergenic 35.0%
!! CTATAACTGCTTCAGGTTTT+TGG - chr8_1:8680958-8680977 Msa1176590:intron 35.0%
CGATGTTTGTGTTAGCATAA+GGG + chr8_1:8681127-8681146 None:intergenic 35.0%
! AGAGGATTCTCGTTCTTTTT+CGG + chr8_1:8681194-8681213 None:intergenic 35.0%
CCAAATAACCAACAATCTAG+AGG + chr8_1:8681212-8681231 None:intergenic 35.0%
! CCTCTAGATTGTTGGTTATT+TGG - chr8_1:8681209-8681228 Msa1176590:intron 35.0%
! CTTTTCAGTTTCACATGCAT+TGG + chr8_1:8681357-8681376 None:intergenic 35.0%
CAATGCATGTGAAACTGAAA+AGG - chr8_1:8681355-8681374 Msa1176590:CDS 35.0%
TTGTTGGACAGTGAATAGTT+AGG + chr8_1:8681389-8681408 None:intergenic 35.0%
AACTATTCACTGTCCAACAA+AGG - chr8_1:8681389-8681408 Msa1176590:CDS 35.0%
ACTATTCACTGTCCAACAAA+GGG - chr8_1:8681390-8681409 Msa1176590:intron 35.0%
! GATTCCTTTCACATTTTAGG+AGG - chr8_1:8681548-8681567 Msa1176590:intron 35.0%
CTTACCTCCTAAAATGTGAA+AGG + chr8_1:8681555-8681574 None:intergenic 35.0%
GGTTGTCCTTTGAATAAATG+AGG - chr8_1:8681607-8681626 Msa1176590:intron 35.0%
GAATAAATGAGGTCAATGGT+TGG - chr8_1:8681618-8681637 Msa1176590:intron 35.0%
GAAAATGGGTCAGTTATTCT+GGG + chr8_1:8681656-8681675 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+TGG + chr8_1:8681657-8681676 None:intergenic 35.0%
!! TGTTTTTGAGAAGGTGCAAA+TGG - chr8_1:8682327-8682346 Msa1176590:intron 35.0%
GAAAATGACATGATGCTTGT+CGG - chr8_1:8682490-8682509 Msa1176590:five_prime_UTR 35.0%
TGAGTCTAGATTCACAGAAT+AGG - chr8_1:8682739-8682758 Msa1176590:five_prime_UTR 35.0%
GAGTCTAGATTCACAGAATA+GGG - chr8_1:8682740-8682759 Msa1176590:five_prime_UTR 35.0%
!!! TTTTGGTTTGAGAAGGGAAA+TGG - chr8_1:8682810-8682829 Msa1176590:five_prime_UTR 35.0%
CAGAAAAAGGCAACAACGTT+GGG - chr8_1:8677633-8677652 Msa1176590:three_prime_UTR 40.0%
!! TGGATTCGTTCAGGTTCTTT+TGG - chr8_1:8677668-8677687 Msa1176590:three_prime_UTR 40.0%
!! GGATTCGTTCAGGTTCTTTT+GGG - chr8_1:8677669-8677688 Msa1176590:three_prime_UTR 40.0%
CAACGACATCACTTAAAGGA+AGG - chr8_1:8677707-8677726 Msa1176590:three_prime_UTR 40.0%
TTTCTCTGTCTTGGGTTTGT+TGG + chr8_1:8677850-8677869 None:intergenic 40.0%
GTATTAGGAACATCCACCAA+AGG + chr8_1:8678511-8678530 None:intergenic 40.0%
! TTGGTGGATGTTCCTAATAC+TGG - chr8_1:8678511-8678530 Msa1176590:intron 40.0%
CTGATTCAATTCCTGATCAG+TGG + chr8_1:8678739-8678758 None:intergenic 40.0%
CACTGATCAGGAATTGAATC+AGG - chr8_1:8678737-8678756 Msa1176590:intron 40.0%
ACACGGCATAAAATCTTCGA+CGG + chr8_1:8678783-8678802 None:intergenic 40.0%
!!! CTAGTTTTGGTTTCTCTTGG+TGG - chr8_1:8679117-8679136 Msa1176590:CDS 40.0%
GAATCAGAAGGATTTGGATC+AGG + chr8_1:8679171-8679190 None:intergenic 40.0%
AGGATCTTCATGGATTTGAG+TGG - chr8_1:8679429-8679448 Msa1176590:CDS 40.0%
! GTCTTGACTTGATCGTTGTA+GGG - chr8_1:8679862-8679881 Msa1176590:intron 40.0%
! TCTTGACTTGATCGTTGTAG+GGG - chr8_1:8679863-8679882 Msa1176590:intron 40.0%
! GATATCACAGATGAAGGCAT+AGG + chr8_1:8679941-8679960 None:intergenic 40.0%
TGGCTTGATATCACAGATGA+AGG + chr8_1:8679947-8679966 None:intergenic 40.0%
TTCTCACTGGAGATCATTGA+AGG - chr8_1:8680581-8680600 Msa1176590:CDS 40.0%
TTCATCCCATTGAACCTAAG+TGG + chr8_1:8680683-8680702 None:intergenic 40.0%
! GAAGAAACTCTTTCTGGTCT+TGG + chr8_1:8680718-8680737 None:intergenic 40.0%
GACCAGAAAGAGTTTCTTCA+TGG - chr8_1:8680719-8680738 Msa1176590:intron 40.0%
TCCCATGAAGAAACTCTTTC+TGG + chr8_1:8680724-8680743 None:intergenic 40.0%
ATCGATCCTATAACTGCTTC+AGG - chr8_1:8680951-8680970 Msa1176590:intron 40.0%
!! GATTGTTAGCTCTAGAGTCT+TGG - chr8_1:8681055-8681074 Msa1176590:intron 40.0%
GTTTGTGTTAGCATAAGGGT+TGG + chr8_1:8681123-8681142 None:intergenic 40.0%
GCGATGTTTGTGTTAGCATA+AGG + chr8_1:8681128-8681147 None:intergenic 40.0%
!!! TCTTTTTCGGGTCTTCTACT+CGG + chr8_1:8681181-8681200 None:intergenic 40.0%
! GAGGATTCTCGTTCTTTTTC+GGG + chr8_1:8681193-8681212 None:intergenic 40.0%
ACGAGAATCCTCTAGATTGT+TGG - chr8_1:8681201-8681220 Msa1176590:intron 40.0%
! TTTCACATGCATTGGTGGTA+AGG + chr8_1:8681349-8681368 None:intergenic 40.0%
TTCAGTTTCACATGCATTGG+TGG + chr8_1:8681354-8681373 None:intergenic 40.0%
CTGATGCATCACCAAATGAA+TGG - chr8_1:8681432-8681451 Msa1176590:intron 40.0%
! AGCTTGTTCTGCCATTCATT+TGG + chr8_1:8681446-8681465 None:intergenic 40.0%
AAATGAATGGCAGAACAAGC+TGG - chr8_1:8681445-8681464 Msa1176590:intron 40.0%
TTAGTCCTTGTTCTCATGGA+TGG + chr8_1:8681479-8681498 None:intergenic 40.0%
ATCCATGAGAACAAGGACTA+AGG - chr8_1:8681478-8681497 Msa1176590:intron 40.0%
TACCTTAGTCCTTGTTCTCA+TGG + chr8_1:8681483-8681502 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG - chr8_1:8681824-8681843 Msa1176590:intron 40.0%
ATCTGTGTGAAATGAGCCAA+GGG - chr8_1:8681825-8681844 Msa1176590:intron 40.0%
AGCCAAGGGGTCAAATAAAT+TGG - chr8_1:8681839-8681858 Msa1176590:intron 40.0%
GCCAAGGGGTCAAATAAATT+GGG - chr8_1:8681840-8681859 Msa1176590:intron 40.0%
TCCCAATTTATTTGACCCCT+TGG + chr8_1:8681844-8681863 None:intergenic 40.0%
AGGGGTCAAATAAATTGGGA+CGG - chr8_1:8681844-8681863 Msa1176590:intron 40.0%
GTCAAATAAATTGGGACGGA+GGG - chr8_1:8681848-8681867 Msa1176590:intron 40.0%
! TTTGAGAAGGTGCAAATGGA+AGG - chr8_1:8682331-8682350 Msa1176590:intron 40.0%
! ATTGATGTTACTTACGGCCA+TGG + chr8_1:8682523-8682542 None:intergenic 40.0%
! ATGCAGGGAATTTTGCAACA+TGG - chr8_1:8682626-8682645 Msa1176590:five_prime_UTR 40.0%
GCAGAAAAAGGCAACAACGT+TGG - chr8_1:8677632-8677651 Msa1176590:three_prime_UTR 45.0%
!! TTGGTAACGTGGATTCGTTC+AGG - chr8_1:8677659-8677678 Msa1176590:three_prime_UTR 45.0%
TTGTTGAGAACTTCCTCCTG+GGG + chr8_1:8678146-8678165 None:intergenic 45.0%
CTTGTTGAGAACTTCCTCCT+GGG + chr8_1:8678147-8678166 None:intergenic 45.0%
TCTTGTTGAGAACTTCCTCC+TGG + chr8_1:8678148-8678167 None:intergenic 45.0%
GAGTTATGGAAGTTGTGTGC+AGG - chr8_1:8678484-8678503 Msa1176590:intron 45.0%
CTACTTTCCTCAAGGTCACA+TGG - chr8_1:8678546-8678565 Msa1176590:intron 45.0%
ACTTGTTCCATGTGACCTTG+AGG + chr8_1:8678556-8678575 None:intergenic 45.0%
GGATTTGGATCAGGATCTAC+AGG + chr8_1:8679162-8679181 None:intergenic 45.0%
GCATCTGATACTAGCACACA+TGG - chr8_1:8679231-8679250 Msa1176590:CDS 45.0%
TCTGATACTAGCACACATGG+TGG - chr8_1:8679234-8679253 Msa1176590:CDS 45.0%
CTAGCAGCAAAGGATCTTCA+TGG - chr8_1:8679419-8679438 Msa1176590:CDS 45.0%
! ACCTGATCACAGTAGTGGAA+GGG + chr8_1:8679604-8679623 None:intergenic 45.0%
TACTGTGATCAGGTCAACCA+AGG - chr8_1:8679610-8679629 Msa1176590:intron 45.0%
TGTCGCATCCAAAAGATTGG+TGG - chr8_1:8679665-8679684 Msa1176590:intron 45.0%
! GGTCTTGACTTGATCGTTGT+AGG - chr8_1:8679861-8679880 Msa1176590:intron 45.0%
TCAAGCCAAAGCATGCATCT+TGG - chr8_1:8679959-8679978 Msa1176590:CDS 45.0%
CAAGATGAGATTCGAAGGAG+AGG - chr8_1:8680225-8680244 Msa1176590:intron 45.0%
CAGGATGGTCAAATTCTCAC+TGG - chr8_1:8680568-8680587 Msa1176590:CDS 45.0%
CCTACCGATGTTTCATCTTG+CGG - chr8_1:8680814-8680833 Msa1176590:intron 45.0%
TAGGATCGATGTTCAAACCC+AGG + chr8_1:8680941-8680960 None:intergenic 45.0%
!!! GCTTCAGGTTTTTGGTATCC+CGG - chr8_1:8680966-8680985 Msa1176590:intron 45.0%
CACGAGCATACCCAATTAAC+CGG - chr8_1:8681002-8681021 Msa1176590:intron 45.0%
!! TGTTAGCTCTAGAGTCTTGG+TGG - chr8_1:8681058-8681077 Msa1176590:intron 45.0%
GAGTCTTGGTGGAAGGAATT+TGG - chr8_1:8681069-8681088 Msa1176590:intron 45.0%
TTTCTTCTGCTGCCCTTTGT+TGG + chr8_1:8681405-8681424 None:intergenic 45.0%
CTGTACCATCCATGAGAACA+AGG - chr8_1:8681471-8681490 Msa1176590:intron 45.0%
! ATGGGTCAGTTATTCTGGGA+CGG + chr8_1:8681652-8681671 None:intergenic 45.0%
TCTGTGTGAAATGAGCCAAG+GGG - chr8_1:8681826-8681845 Msa1176590:intron 45.0%
GGTCAAATAAATTGGGACGG+AGG - chr8_1:8681847-8681866 Msa1176590:intron 45.0%
! CAAATGGAAGGTGTAGCTGT+TGG - chr8_1:8682343-8682362 Msa1176590:intron 45.0%
!!! ATATACAATTTTTTATTTTT+AGG + chr8_1:8682173-8682192 None:intergenic 5.0%
!!! TTGAAATATTAATAATTTTA+TGG + chr8_1:8682251-8682270 None:intergenic 5.0%
!! AAATTATTAATATTTCAAAA+TGG - chr8_1:8682253-8682272 Msa1176590:intron 5.0%
AGGCAACAACGTTGGGAAGT+TGG - chr8_1:8677640-8677659 Msa1176590:three_prime_UTR 50.0%
!! ACGTTGGGAAGTTGGTAACG+TGG - chr8_1:8677648-8677667 Msa1176590:three_prime_UTR 50.0%
GAAGTTGTGTGCAGGACCTT+TGG - chr8_1:8678492-8678511 Msa1176590:intron 50.0%
TACCAATGGAGGCAAGCACT+CGG + chr8_1:8679286-8679305 None:intergenic 50.0%
TTTGCTGCTAGCTCCTGAGT+TGG + chr8_1:8679410-8679429 None:intergenic 50.0%
AACTCAGGAGCTAGCAGCAA+AGG - chr8_1:8679409-8679428 Msa1176590:CDS 50.0%
TCCCTTCCACTACTGTGATC+AGG - chr8_1:8679600-8679619 Msa1176590:intron 50.0%
! GACCTGATCACAGTAGTGGA+AGG + chr8_1:8679605-8679624 None:intergenic 50.0%
GGTTGACCTGATCACAGTAG+TGG + chr8_1:8679609-8679628 None:intergenic 50.0%
TGTGATCAGGTCAACCAAGG+AGG - chr8_1:8679613-8679632 Msa1176590:intron 50.0%
GTTGTAAGCAAGTGCCTCCT+TGG + chr8_1:8679630-8679649 None:intergenic 50.0%
!! AGGAGGCACTTGCTTACAAC+CGG - chr8_1:8679630-8679649 Msa1176590:intron 50.0%
TGCGACAAATGTACTCCAGC+CGG + chr8_1:8679652-8679671 None:intergenic 50.0%
! GCATCCAAAAGATTGGTGGC+CGG - chr8_1:8679669-8679688 Msa1176590:intron 50.0%
! ATCTCCGGCCACCAATCTTT+TGG + chr8_1:8679676-8679695 None:intergenic 50.0%
GATCGTTGTAGGGGAGAGAA+CGG - chr8_1:8679872-8679891 Msa1176590:intron 50.0%
ATCGTTGTAGGGGAGAGAAC+GGG - chr8_1:8679873-8679892 Msa1176590:intron 50.0%
GAGAGGACTCACCTGAAAGA+AGG - chr8_1:8680242-8680261 Msa1176590:intron 50.0%
TCTGGCACTATTGTTGGGGT+TGG - chr8_1:8680534-8680553 Msa1176590:CDS 50.0%
CTGGCACTATTGTTGGGGTT+GGG - chr8_1:8680535-8680554 Msa1176590:CDS 50.0%
TGGCACTATTGTTGGGGTTG+GGG - chr8_1:8680536-8680555 Msa1176590:CDS 50.0%
! TTGGGGATGTTTCTGCAGGA+TGG - chr8_1:8680553-8680572 Msa1176590:CDS 50.0%
CCGCAAGATGAAACATCGGT+AGG + chr8_1:8680817-8680836 None:intergenic 50.0%
CGCACCGCAAGATGAAACAT+CGG + chr8_1:8680821-8680840 None:intergenic 50.0%
TTGGGTATGCTCGTGAGCTT+GGG + chr8_1:8680997-8681016 None:intergenic 50.0%
ATTGGGTATGCTCGTGAGCT+TGG + chr8_1:8680998-8681017 None:intergenic 50.0%
!! TTCGGCAGCACCGGTTAATT+GGG + chr8_1:8681015-8681034 None:intergenic 50.0%
ACTCTCCTTGCCTTGGAGTT+CGG + chr8_1:8681033-8681052 None:intergenic 50.0%
CAATCTGACTCTCCTTGCCT+TGG + chr8_1:8681040-8681059 None:intergenic 50.0%
!! AGCTCTAGAGTCTTGGTGGA+AGG - chr8_1:8681062-8681081 Msa1176590:intron 50.0%
!! GTCAGTTATTCTGGGACGGA+GGG + chr8_1:8681648-8681667 None:intergenic 50.0%
GAGTGTAATCTAAGGGCCCC+AGG - chr8_1:8678127-8678146 Msa1176590:CDS 55.0%
TGTAATCTAAGGGCCCCAGG+AGG - chr8_1:8678130-8678149 Msa1176590:CDS 55.0%
GTTGTGTGCAGGACCTTTGG+TGG - chr8_1:8678495-8678514 Msa1176590:intron 55.0%
GCTGCAAGCATCCACTGATC+AGG - chr8_1:8678725-8678744 Msa1176590:intron 55.0%
TACCGAGTGCTTGCCTCCAT+TGG - chr8_1:8679281-8679300 Msa1176590:CDS 55.0%
GACACCAGCAACTCCAACTC+AGG - chr8_1:8679394-8679413 Msa1176590:CDS 55.0%
! AGCTCCTGAGTTGGAGTTGC+TGG + chr8_1:8679401-8679420 None:intergenic 55.0%
GAGAACGGGCAACTGAGAGT+TGG - chr8_1:8679887-8679906 Msa1176590:intron 55.0%
GGCAACTGAGAGTTGGCGTT+AGG - chr8_1:8679894-8679913 Msa1176590:intron 55.0%
GCACGCCAAGATGCATGCTT+TGG + chr8_1:8679967-8679986 None:intergenic 55.0%
TCGTGAGCTTGGGATGATCC+GGG + chr8_1:8680987-8681006 None:intergenic 55.0%
CTCGTGAGCTTGGGATGATC+CGG + chr8_1:8680988-8681007 None:intergenic 55.0%
!! GTTCGGCAGCACCGGTTAAT+TGG + chr8_1:8681016-8681035 None:intergenic 55.0%
ATCGCATCTAGACCGAGCGA+TGG - chr8_1:8681143-8681162 Msa1176590:CDS 55.0%
CTTCTACTCGGTCGCATGTG+AGG + chr8_1:8681169-8681188 None:intergenic 55.0%
!! GGTCAGTTATTCTGGGACGG+AGG + chr8_1:8681649-8681668 None:intergenic 55.0%
!! GGACGGAGGGAGTACTATGT+AGG - chr8_1:8681861-8681880 Msa1176590:intron 55.0%
GGCACTTGCTTACAACCGGC+TGG - chr8_1:8679634-8679653 Msa1176590:intron 60.0%
! GGGGTTGGGGATGTTTCTGC+AGG - chr8_1:8680549-8680568 Msa1176590:CDS 60.0%
TGCTGCCGAACTCCAAGGCA+AGG - chr8_1:8681025-8681044 Msa1176590:intron 60.0%
TCGCATGTGAGGCCATCGCT+CGG + chr8_1:8681158-8681177 None:intergenic 60.0%
!! ACCGGTGCTGCCGAACTCCA+AGG - chr8_1:8681020-8681039 Msa1176590:intron 65.0%
GCCTTGGAGTTCGGCAGCAC+CGG + chr8_1:8681024-8681043 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 8677519 8683039 8677519 ID=Msa1176590;Name=Msa1176590
chr8_1 mRNA 8677519 8683039 8677519 ID=Msa1176590-mRNA-1;Parent=Msa1176590;Name=Msa1176590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=596|1|1|1|1|1|14|248|677
chr8_1 exon 8677519 8677926 8677519 ID=Msa1176590-mRNA-1:exon:2944;Parent=Msa1176590-mRNA-1
chr8_1 exon 8678031 8678218 8678031 ID=Msa1176590-mRNA-1:exon:2943;Parent=Msa1176590-mRNA-1
chr8_1 exon 8679059 8679585 8679059 ID=Msa1176590-mRNA-1:exon:2942;Parent=Msa1176590-mRNA-1
chr8_1 exon 8679723 8679870 8679723 ID=Msa1176590-mRNA-1:exon:2941;Parent=Msa1176590-mRNA-1
chr8_1 exon 8679956 8680028 8679956 ID=Msa1176590-mRNA-1:exon:2940;Parent=Msa1176590-mRNA-1
chr8_1 exon 8680295 8680411 8680295 ID=Msa1176590-mRNA-1:exon:2939;Parent=Msa1176590-mRNA-1
chr8_1 exon 8680511 8680675 8680511 ID=Msa1176590-mRNA-1:exon:2938;Parent=Msa1176590-mRNA-1
chr8_1 exon 8680846 8680936 8680846 ID=Msa1176590-mRNA-1:exon:2937;Parent=Msa1176590-mRNA-1
chr8_1 exon 8681085 8681169 8681085 ID=Msa1176590-mRNA-1:exon:2936;Parent=Msa1176590-mRNA-1
chr8_1 exon 8681256 8681408 8681256 ID=Msa1176590-mRNA-1:exon:2935;Parent=Msa1176590-mRNA-1
chr8_1 exon 8681568 8681624 8681568 ID=Msa1176590-mRNA-1:exon:2934;Parent=Msa1176590-mRNA-1
chr8_1 exon 8681737 8681832 8681737 ID=Msa1176590-mRNA-1:exon:2933;Parent=Msa1176590-mRNA-1
chr8_1 exon 8681985 8682100 8681985 ID=Msa1176590-mRNA-1:exon:2932;Parent=Msa1176590-mRNA-1
chr8_1 exon 8682386 8683039 8682386 ID=Msa1176590-mRNA-1:exon:2931;Parent=Msa1176590-mRNA-1
chr8_1 five_prime_UTR 8682444 8683039 8682444 ID=Msa1176590-mRNA-1:five_prime_utr;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8682386 8682443 8682386 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8681985 8682100 8681985 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8681737 8681832 8681737 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8681568 8681624 8681568 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8681256 8681408 8681256 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8681085 8681169 8681085 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8680846 8680936 8680846 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8680511 8680675 8680511 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8680295 8680411 8680295 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8679956 8680028 8679956 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8679723 8679870 8679723 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8679059 8679585 8679059 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8678031 8678218 8678031 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 CDS 8677767 8677926 8677767 ID=Msa1176590-mRNA-1:cds;Parent=Msa1176590-mRNA-1
chr8_1 three_prime_UTR 8677519 8677766 8677519 ID=Msa1176590-mRNA-1:three_prime_utr;Parent=Msa1176590-mRNA-1
Gene Sequence

>Msa1176590

ATGGCACATCTTGAGTGTAATCTAAGGGCCCCAGGAGGAAGTTCTCAACAAGAAAAAGGTGTTAAAAATGATGATTTGTATGAAGAGTTATGGAAGTTGTGTGCAGGACCTTTGGTGGATGTTCCTAATACTGGTGACAGAGTTTTCTACTTTCCTCAAGGTCACATGGAACAACTGCAAGCATCCACTGATCAGGAATTGAATCAGGAAATTCCACATTTCAATTTACCGTCGAAGATTTTATGCCGTGTCGTCAATATTCAGTTGTTGGCTGAGCAAGAAACTGATGAGATTTATGCTTGTGTTGCTTTGCTTCCAGAATCAGATCAAACTGAGCCTGTAGATCCTGATCCAAATCCTTCTGATTCTCCAAAACAGAAGTTTCACTCATTTTGTAAAATATTAACTGCATCTGATACTAGCACACATGGTGGATTTTCAGTTCTTAGAAAGCATGCTACCGAGTGCTTGCCTCCATTGGACATGACACCAGCAACTCCAACTCAGGAGCTAGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAACACATATATAGAGGTCAACCAAGGAGGCACTTGCTTACAACCGGCTGGAGTACATTTGTCGCATCCAAAAGATTGGTGGCCGGAGATGCTTTTGTTTTCCTAAGGGGAGAGAACGGGCAACTGAGAGTTGGCGTTAGGCGTATAGCTAAGCAGCACAGTCCTATGCCTTCATCTGTGATATCAAGCCAAAGCATGCATCTTGGCGTGCTTGCTACTGCTTCTCACGCTGTTATGACTCGTACCATGTTCGTCGTTTATTACAAACCAAGGACTAGTCAGTTTATTGTTGGTTTGAATAAGTATTTGGAGGCAGTCAACAATCATAAGTTTTCTGTTGGTATGAGATTCAAGATGAGATTCGAAGGAGAGGACTCACCTGAAAGAAGATTTTCTGGCACTATTGTTGGGGTTGGGGATGTTTCTGCAGGATGGTCAAATTCTCACTGGAGATCATTGAAGGTTCAATGGGATGAAGCAGCAACAATTCCAAGACCAGAAAGAGTTTCTTCATGGGAGATAGAACCTTTTATAGCATCTCCTACTTTGAATGTCACTCAAACATCAGTGAAAAGCAAAAGATCTAGGCCTACCGATGTTTCATCTTGCGGTTTTTGGTATCCCGGATCATCCCAAGCTCACGAGCATACCCAATTAACCGGTGCTGCCGAACTCCAAGGCAAGGAGAGTCAGATTGTTAGCTCTAGAGTCTTGGTGGAAGGAATTTGGCCTAATTCACCACATTTGAATGTAACTTCCAACCCTTATGCTAACACAAACATCGCATCTAGACCGAGCGATGGCCTCACATGCGACCGAGTAGAAGACCCGAAAAAGAACGAGAATCCTCTAGATTGTTGGTTATTTGGAGTTAATTTGAATAACAAAAACAAATCTTGCAATGTTAATTCATGTTTAGAAAAAGAACTTGGATGTCCAAGTTTAAACATTGTTACTACAAGTGGTCCCAAAGAATCTATTATCCTTACCACCAATGCATGTGAAACTGAAAAGGTTCAGAGTCCTAACTATTCACTGTCCAACAAAGGGCAGCAGAAGAAAATAATTTCTGATGCATCACCAAATGAATGGCAGAACAAGCTGGCTACTGTACCATCCATGAGAACAAGGACTAAGGTGCAAATGGAAGGTGTAGCTGTTGGTCGTGCACTTGACTTAACCATGTTAAATGGTTATGATGAACTCATAGATGAAGTTGAGAAATTATTTGATATTAAAGGAGAGTTACGTTCACAAAACAAATGGAGAGTTACTTTCACTGATAATGAAAATGACATGATGCTTGTCGGTGATGATCCATGGCCGGAATTTTGCAACATGGTAAAGAAGATTTTCATTTGTTCAAATGAGGAATTAAAGAAAATGAAATGCAAGTTACCTAATTCTTCATTAGAGATTGAAGAGACTTTGTTGAGTCTAGATTCACAGAATAGGGATGAGAATCAACAAATTCATGTGACTTAA
Protein sequence

>Msa1176590

MAHLECNLRAPGGSSQQEKGVKNDDLYEELWKLCAGPLVDVPNTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPSKILCRVVNIQLLAEQETDEIYACVALLPESDQTEPVDPDPNPSDSPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTPATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGENGQLRVGVRRIAKQHSPMPSSVISSQSMHLGVLATASHAVMTRTMFVVYYKPRTSQFIVGLNKYLEAVNNHKFSVGMRFKMRFEGEDSPERRFSGTIVGVGDVSAGWSNSHWRSLKVQWDEAATIPRPERVSSWEIEPFIASPTLNVTQTSVKSKRSRPTDVSSCGFWYPGSSQAHEHTQLTGAAELQGKESQIVSSRVLVEGIWPNSPHLNVTSNPYANTNIASRPSDGLTCDRVEDPKKNENPLDCWLFGVNLNNKNKSCNVNSCLEKELGCPSLNIVTTSGPKESIILTTNACETEKVQSPNYSLSNKGQQKKIISDASPNEWQNKLATVPSMRTRTKVQMEGVAVGRALDLTMLNGYDELIDEVEKLFDIKGELRSQNKWRVTFTDNENDMMLVGDDPWPEFCNMVKKIFICSNEELKKMKCKLPNSSLEIEETLLSLDSQNRDENQQIHVT*