AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1176770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176770 MtrunA17_Chr8g0345981 75.665 752 170 7 1 749 23 764 0.0 1134
Msa1176770 MtrunA17_Chr8g0345991 76.139 746 166 5 5 749 26 760 0.0 1131
Msa1176770 MtrunA17_Chr8g0345961 76.330 752 157 7 5 749 26 763 0.0 1125
Msa1176770 MtrunA17_Chr2g0303881 73.442 738 178 7 17 749 8 732 0.0 1044
Msa1176770 MtrunA17_Chr1g0189251 69.612 747 198 11 7 744 29 755 0.0 1022
Msa1176770 MtrunA17_Chr8g0345971 68.499 746 213 10 5 742 27 758 0.0 1008
Msa1176770 MtrunA17_Chr7g0276151 64.564 745 249 7 7 749 31 762 0.0 924
Msa1176770 MtrunA17_Chr7g0248871 47.936 751 358 15 8 742 30 763 0.0 672
Msa1176770 MtrunA17_Chr1g0189561 48.148 756 362 15 3 747 29 765 0.0 663
Msa1176770 MtrunA17_Chr1g0204321 39.529 764 411 17 8 743 37 777 3.80e-179 531
Msa1176770 MtrunA17_Chr4g0037221 40.808 767 392 18 8 743 33 768 2.55e-176 524
Msa1176770 MtrunA17_Chr5g0401511 41.223 752 396 15 8 741 36 759 7.18e-174 517
Msa1176770 MtrunA17_Chr4g0053781 41.215 757 392 19 8 743 31 755 8.46e-174 517
Msa1176770 MtrunA17_Chr2g0300751 39.374 767 416 16 4 740 23 770 4.74e-173 516
Msa1176770 MtrunA17_Chr7g0262161 40.649 770 400 19 2 743 21 761 4.79e-172 513
Msa1176770 MtrunA17_Chr7g0248861 45.875 606 300 13 8 598 30 622 8.58e-170 510
Msa1176770 MtrunA17_Chr7g0248861 57.613 243 92 4 108 349 627 859 4.75e-73 254
Msa1176770 MtrunA17_Chr4g0020651 40.372 753 399 14 8 740 32 754 9.37e-170 507
Msa1176770 MtrunA17_Chr1g0152771 39.398 764 412 16 2 740 23 760 1.60e-163 491
Msa1176770 MtrunA17_Chr8g0344971 38.882 769 403 16 6 743 28 760 5.68e-163 489
Msa1176770 MtrunA17_Chr4g0070391 39.895 762 391 20 8 743 32 752 1.05e-162 488
Msa1176770 MtrunA17_Chr3g0134621 40.131 765 370 22 3 740 30 733 9.95e-155 467
Msa1176770 MtrunA17_Chr8g0344331 38.342 772 420 22 4 746 34 778 1.00e-154 469
Msa1176770 MtrunA17_Chr4g0057061 38.773 766 385 25 8 742 62 774 1.76e-152 462
Msa1176770 MtrunA17_Chr7g0250411 41.057 738 372 24 52 749 76 790 6.09e-151 459
Msa1176770 MtrunA17_Chr7g0246461 38.889 720 359 18 49 743 77 740 2.32e-146 446
Msa1176770 MtrunA17_Chr4g0076611 39.076 714 391 15 52 742 1 693 3.16e-143 436
Msa1176770 MtrunA17_Chr7g0250481 36.654 783 431 21 8 742 32 797 1.89e-142 437
Msa1176770 MtrunA17_Chr3g0120521 38.108 719 393 17 52 742 75 769 3.49e-142 436
Msa1176770 MtrunA17_Chr7g0250391 39.752 727 383 22 52 742 75 782 3.64e-142 436
Msa1176770 MtrunA17_Chr5g0398331 37.958 764 388 19 8 742 44 750 5.03e-142 435
Msa1176770 MtrunA17_Chr8g0377961 38.017 726 395 17 52 748 81 780 1.17e-139 429
Msa1176770 MtrunA17_Chr7g0250371 37.676 783 420 24 3 742 27 784 1.30e-139 430
Msa1176770 MtrunA17_Chr5g0398241 38.462 767 392 23 3 742 40 753 3.63e-139 427
Msa1176770 MtrunA17_Chr7g0250331 39.247 744 386 21 52 742 76 806 6.65e-138 426
Msa1176770 MtrunA17_Chr5g0398401 37.940 767 396 23 3 742 40 753 5.30e-137 422
Msa1176770 MtrunA17_Chr4g0057471 37.707 724 391 21 52 742 12 708 8.74e-136 417
Msa1176770 MtrunA17_Chr4g0057531 39.365 724 390 21 52 746 77 780 1.14e-135 419
Msa1176770 MtrunA17_Chr5g0407701 36.929 723 395 19 53 749 69 756 2.55e-135 417
Msa1176770 MtrunA17_Chr4g0026641 37.927 762 412 23 7 742 27 753 1.46e-134 416
Msa1176770 MtrunA17_Chr8g0369891 36.606 713 395 18 53 742 74 752 5.94e-134 414
Msa1176770 MtrunA17_Chr8g0351011 37.691 719 376 21 52 745 83 754 6.35e-133 411
Msa1176770 MtrunA17_Chr2g0285121 38.587 736 389 22 52 743 67 783 1.25e-132 411
Msa1176770 MtrunA17_Chr7g0266051 37.258 722 381 18 52 747 35 710 5.46e-132 407
Msa1176770 MtrunA17_Chr7g0227991 36.074 754 404 22 8 742 39 733 7.96e-132 408
Msa1176770 MtrunA17_Chr1g0146251 36.140 772 392 21 3 742 32 734 1.18e-131 407
Msa1176770 MtrunA17_Chr3g0136151 37.466 734 382 22 52 743 64 762 2.78e-131 407
Msa1176770 MtrunA17_Chr5g0398351 38.095 777 381 22 3 742 791 1504 5.07e-131 424
Msa1176770 MtrunA17_Chr5g0398351 37.940 767 385 23 8 742 26 733 2.74e-129 419
Msa1176770 MtrunA17_Chr5g0398311 37.451 761 392 20 8 742 44 746 2.16e-130 404
Msa1176770 MtrunA17_Chr4g0057481 38.484 686 367 18 91 746 33 693 1.59e-129 400
Msa1176770 MtrunA17_Chr8g0354771 36.450 738 402 19 43 742 55 763 2.57e-129 402
Msa1176770 MtrunA17_Chr6g0470881 37.191 769 390 27 1 742 27 729 3.42e-129 401
Msa1176770 MtrunA17_Chr1g0170081 36.566 763 395 23 4 742 33 730 6.59e-129 400
Msa1176770 MtrunA17_Chr1g0146271 36.211 776 384 26 3 742 32 732 1.41e-127 397
Msa1176770 MtrunA17_Chr6g0470851 36.959 763 383 27 8 742 37 729 2.58e-127 396
Msa1176770 MtrunA17_Chr8g0334521 36.068 768 394 22 3 742 35 733 1.48e-126 394
Msa1176770 MtrunA17_Chr2g0285111 37.636 736 393 22 53 743 72 786 2.19e-126 395
Msa1176770 MtrunA17_Chr3g0079971 37.219 755 395 23 8 742 36 731 4.61e-125 390
Msa1176770 MtrunA17_Chr4g0057461 39.969 653 336 22 127 746 3 632 1.70e-123 383
Msa1176770 MtrunA17_Chr5g0423261 38.949 647 346 18 126 746 2 625 7.08e-123 381
Msa1176770 MtrunA17_Chr4g0057491 38.794 647 345 19 127 746 3 625 6.78e-121 376
Msa1176770 MtrunA17_Chr8g0334491 36.944 720 362 25 52 742 71 727 1.58e-120 378
Msa1176770 MtrunA17_Chr3g0143251 37.260 730 388 23 52 744 70 766 5.46e-120 378
Msa1176770 MtrunA17_Chr7g0246451 35.784 721 387 19 52 745 77 748 9.54e-120 377
Msa1176770 MtrunA17_Chr4g0057511 37.461 638 356 17 131 746 3 619 2.51e-115 361
Msa1176770 MtrunA17_Chr8g0354741 36.923 650 345 20 121 742 21 633 1.31e-114 360
Msa1176770 MtrunA17_Chr5g0439271 38.934 619 312 22 165 742 8 601 3.52e-107 339
Msa1176770 MtrunA17_Chr8g0376841 37.687 536 278 14 52 561 78 583 9.03e-95 306
Msa1176770 MtrunA17_Chr4g0071871 30.585 752 434 24 51 741 88 812 1.12e-86 291
Msa1176770 MtrunA17_Chr2g0298601 30.933 750 428 26 53 740 90 811 5.28e-83 281
Msa1176770 MtrunA17_Chr2g0301011 35.211 568 266 18 78 628 1 483 1.15e-80 266
Msa1176770 MtrunA17_Chr5g0447171 36.207 522 245 17 286 742 9 507 5.15e-75 251
Msa1176770 MtrunA17_Chr7g0250441 43.599 289 153 4 463 749 9 289 8.11e-69 229
Msa1176770 MtrunA17_Chr4g0075331 29.216 753 430 26 53 737 15 732 6.74e-68 238
Msa1176770 MtrunA17_Chr8g0380961 29.194 757 440 23 53 742 118 845 3.04e-66 235
Msa1176770 MtrunA17_Chr2g0302951 29.908 759 433 28 53 742 110 838 1.30e-65 233
Msa1176770 MtrunA17_Chr7g0250461 39.268 410 212 16 52 435 76 474 6.76e-65 224
Msa1176770 MtrunA17_Chr7g0261701 44.718 284 143 6 460 742 19 289 6.62e-64 215
Msa1176770 MtrunA17_Chr5g0418921 73.723 137 35 1 455 591 1 136 2.56e-62 206
Msa1176770 MtrunA17_Chr7g0261691 38.506 348 190 10 115 445 5 345 1.73e-60 207
Msa1176770 MtrunA17_Chr6g0480721 40.252 318 168 7 52 366 5 303 4.18e-59 211
Msa1176770 MtrunA17_Chr6g0480721 41.786 280 142 7 467 742 337 599 8.66e-55 199
Msa1176770 MtrunA17_Chr3g0143241 34.442 421 229 11 52 445 70 470 1.55e-58 208
Msa1176770 MtrunA17_Chr8g0346361 40.816 294 148 8 457 742 221 496 1.23e-54 196
Msa1176770 MtrunA17_Chr8g0346361 42.365 203 92 4 143 344 7 185 4.89e-38 148
Msa1176770 MtrunA17_Chr8g0346961 74.359 117 30 0 557 673 1 117 3.03e-54 182
Msa1176770 MtrunA17_Chr3g0097061 36.890 328 169 7 78 391 1 304 8.09e-54 192
Msa1176770 MtrunA17_Chr3g0097061 48.361 122 53 3 517 638 329 440 3.28e-24 106
Msa1176770 MtrunA17_Chr4g0026651 39.482 309 144 8 67 343 2 299 8.66e-54 188
Msa1176770 MtrunA17_Chr4g0035881 37.190 363 174 9 202 559 4 317 7.64e-53 186
Msa1176770 MtrunA17_Chr3g0105451 39.796 294 146 10 459 743 8 279 4.43e-52 182
Msa1176770 MtrunA17_Chr4g0026661 39.615 260 142 6 486 742 12 259 2.93e-50 177
Msa1176770 MtrunA17_Chr2g0312861 41.199 267 126 9 486 742 1 246 2.31e-47 170
Msa1176770 MtrunA17_Chr2g0301031 37.313 268 135 10 486 742 1 246 5.07e-40 147
Msa1176770 MtrunA17_Chr7g0248851 51.007 149 68 3 596 742 1 146 5.14e-39 141
Msa1176770 MtrunA17_Chr3g0103061 40.513 195 104 4 52 240 72 260 3.28e-38 143
Msa1176770 MtrunA17_Chr2g0301911 32.520 369 192 13 140 489 30 360 1.97e-37 144
Msa1176770 MtrunA17_Chr3g0105461 32.628 331 154 7 52 367 69 345 1.55e-36 141
Msa1176770 MtrunA17_Chr2g0312841 40.722 194 91 5 143 335 12 182 2.99e-35 132
Msa1176770 MtrunA17_Chr2g0301921 37.273 220 118 6 528 742 1 205 4.19e-33 127
Msa1176770 MtrunA17_Chr3g0103071 37.931 261 143 9 258 501 1 259 5.15e-32 126
Msa1176770 MtrunA17_Chr4g0071191 37.500 208 112 5 467 670 57 250 1.02e-31 124
Msa1176770 MtrunA17_Chr5g0436021 40.230 174 82 4 166 335 31 186 4.43e-30 117
Msa1176770 MtrunA17_Chr3g0142981 38.547 179 67 3 169 344 32 170 2.06e-27 110
Msa1176770 MtrunA17_Chr8g0376851 34.320 169 104 4 578 742 6 171 3.57e-22 94.4
Msa1176770 MtrunA17_Chr3g0103081 38.255 149 83 5 596 742 1 142 8.59e-22 92.4
Msa1176770 MtrunA17_Chr5g0436031 34.706 170 103 4 576 742 16 180 1.69e-21 93.6
Msa1176770 MtrunA17_Chr2g0301021 27.714 350 148 14 3 351 32 277 5.72e-20 92.8
Msa1176770 MtrunA17_Chr3g0143231 47.778 90 45 2 470 559 2 89 9.88e-17 75.9
Msa1176770 MtrunA17_Chr5g0398341 47.826 92 46 1 528 619 1 90 1.05e-16 76.3
Msa1176770 MtrunA17_Chr3g0143221 32.759 174 88 6 578 743 11 163 2.35e-16 77.4
Msa1176770 MtrunA17_Chr3g0142971 50.000 86 41 2 470 555 2 85 9.02e-15 70.1
Msa1176770 MtrunA17_Chr3g0143021 36.735 98 62 0 52 149 7 104 1.79e-14 70.1
Msa1176770 MtrunA17_Chr3g0142961 35.115 131 73 4 578 700 11 137 2.15e-14 70.9
Msa1176770 MtrunA17_Chr5g0439281 32.000 125 76 3 52 167 73 197 5.18e-14 71.6
Msa1176770 MtrunA17_Chr3g0077671 46.667 75 34 3 519 590 237 308 5.18e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176770 AT5G67090.1 45.614 741 336 21 8 731 25 715 0.0 591
Msa1176770 AT5G67360.1 41.161 758 390 20 8 743 32 755 5.07e-175 520
Msa1176770 AT2G05920.1 40.026 757 405 15 8 747 30 754 1.78e-174 519
Msa1176770 AT4G34980.1 39.845 773 399 20 2 743 22 759 6.65e-170 508
Msa1176770 AT5G51750.1 39.187 763 421 18 4 743 33 775 1.75e-169 507
Msa1176770 AT3G14240.1 40.287 767 403 19 8 743 28 770 2.11e-164 494
Msa1176770 AT1G04110.1 38.911 771 413 20 6 743 26 771 4.68e-164 493
Msa1176770 AT3G14067.1 37.877 763 422 20 6 742 31 767 2.22e-161 486
Msa1176770 AT1G01900.1 40.463 734 398 17 30 743 58 772 2.14e-151 460
Msa1176770 AT2G04160.1 39.335 722 381 19 52 742 75 770 2.22e-145 444
Msa1176770 AT1G20160.2 38.377 727 384 22 52 744 28 724 6.34e-140 429
Msa1176770 AT1G20160.1 38.377 727 384 22 52 744 67 763 3.44e-139 428
Msa1176770 AT5G59810.1 39.216 714 387 17 52 742 85 774 9.93e-137 422
Msa1176770 AT5G45650.2 35.544 799 428 24 2 743 21 789 8.47e-130 405
Msa1176770 AT5G45650.1 35.544 799 428 24 2 743 21 789 8.47e-130 405
Msa1176770 AT4G00230.1 36.415 714 395 15 51 745 73 746 3.55e-129 402
Msa1176770 AT1G32960.1 37.912 728 387 20 52 744 70 767 1.02e-128 401
Msa1176770 AT5G59190.1 38.787 709 362 20 52 741 32 687 3.37e-128 397
Msa1176770 AT4G10550.4 38.154 726 387 20 52 744 16 712 6.28e-128 397
Msa1176770 AT4G10550.2 38.154 726 387 20 52 744 16 712 6.28e-128 397
Msa1176770 AT4G10550.3 38.154 726 387 20 52 744 88 784 1.97e-127 399
Msa1176770 AT4G10550.1 38.154 726 387 20 52 744 72 768 3.27e-127 397
Msa1176770 AT5G03620.1 37.363 728 376 18 53 742 73 758 5.64e-127 396
Msa1176770 AT5G11940.1 35.443 711 416 15 49 744 72 754 3.12e-126 394
Msa1176770 AT4G10540.1 37.517 725 398 19 50 744 66 765 1.14e-124 391
Msa1176770 AT4G26330.2 37.241 725 405 19 52 746 21 725 4.89e-124 388
Msa1176770 AT1G66210.1 35.615 716 407 18 52 749 78 757 2.14e-121 382
Msa1176770 AT5G59090.2 36.681 717 368 22 51 742 68 723 2.72e-121 380
Msa1176770 AT5G59090.1 36.732 716 374 22 51 742 68 728 5.11e-121 380
Msa1176770 AT5G59100.1 36.364 715 385 18 51 742 70 737 2.65e-120 378
Msa1176770 AT5G58840.1 36.827 706 366 18 51 744 71 708 2.74e-120 377
Msa1176770 AT4G26330.1 36.536 739 405 20 52 746 21 739 2.93e-120 378
Msa1176770 AT4G21630.1 36.364 715 397 20 52 744 77 755 4.28e-120 378
Msa1176770 AT3G46850.1 35.279 754 416 22 8 742 34 734 4.35e-120 377
Msa1176770 AT3G46840.1 35.294 765 418 26 3 746 30 738 9.33e-120 377
Msa1176770 AT4G10510.4 36.376 723 403 20 52 744 16 711 2.02e-119 375
Msa1176770 AT4G10510.2 36.376 723 403 20 52 744 1 696 2.20e-119 375
Msa1176770 AT1G32940.4 37.328 726 394 20 52 744 16 713 5.02e-119 374
Msa1176770 AT1G32940.2 37.328 726 394 20 52 744 16 713 5.02e-119 374
Msa1176770 AT4G10510.1 36.376 723 403 20 52 744 60 755 6.07e-119 375
Msa1176770 AT4G10510.3 36.376 723 403 20 52 744 72 767 7.89e-119 375
Msa1176770 AT5G59090.3 36.732 716 372 23 51 742 68 726 8.64e-119 374
Msa1176770 AT1G32940.1 37.328 726 394 20 52 744 67 764 1.07e-118 375
Msa1176770 AT1G66220.1 33.803 710 415 15 52 744 75 746 1.08e-117 372
Msa1176770 AT5G58830.1 37.838 703 360 23 51 742 69 705 3.36e-117 369
Msa1176770 AT5G59130.3 34.945 724 382 17 51 748 32 692 5.10e-117 369
Msa1176770 AT4G10520.1 35.966 709 409 15 52 744 67 746 5.23e-117 370
Msa1176770 AT5G59130.4 35.221 724 380 17 51 748 71 731 2.54e-116 368
Msa1176770 AT5G59130.2 34.358 716 387 13 51 748 71 721 1.87e-115 365
Msa1176770 AT5G59120.1 36.011 722 381 20 51 747 67 732 2.67e-115 365
Msa1176770 AT1G20150.1 34.635 794 422 25 5 748 30 776 7.63e-115 365
Msa1176770 AT4G21640.1 35.294 714 378 18 52 744 79 729 1.30e-113 360
Msa1176770 AT4G21326.1 35.235 701 415 14 52 742 16 687 2.40e-113 358
Msa1176770 AT5G59130.1 35.083 724 377 18 51 748 71 727 2.46e-113 360
Msa1176770 AT5G58820.1 37.429 700 370 21 51 744 65 702 1.13e-112 357
Msa1176770 AT1G32950.2 37.258 722 399 19 52 744 16 712 1.79e-112 357
Msa1176770 AT1G32950.1 37.258 722 399 19 52 744 67 763 6.60e-112 357
Msa1176770 AT4G21650.1 35.475 716 407 18 52 744 79 762 2.23e-111 355
Msa1176770 AT4G15040.2 34.831 712 388 16 52 744 33 687 7.95e-111 352
Msa1176770 AT4G15040.1 34.831 712 388 16 52 744 33 687 7.95e-111 352
Msa1176770 AT4G10530.1 34.545 715 402 17 52 744 67 737 5.67e-107 343
Msa1176770 AT4G21323.1 35.983 717 404 19 48 744 114 795 9.61e-106 342
Msa1176770 AT5G45640.1 33.640 761 382 24 60 743 38 752 3.02e-99 323
Msa1176770 AT5G03620.2 38.951 534 272 12 53 561 73 577 2.94e-94 305
Msa1176770 AT1G32970.1 38.721 594 302 19 179 744 165 724 3.28e-93 306
Msa1176770 AT2G39850.1 31.501 746 411 26 52 742 65 765 5.31e-93 307
Msa1176770 AT4G00230.2 36.842 532 295 10 42 559 64 568 1.94e-92 301
Msa1176770 AT2G19170.1 30.921 760 426 23 49 741 82 809 4.94e-90 300
Msa1176770 AT2G19170.2 30.921 760 426 23 49 741 82 809 4.94e-90 300
Msa1176770 AT5G58840.3 38.012 513 262 11 51 559 71 531 1.01e-89 292
Msa1176770 AT4G30020.3 31.926 758 422 26 49 741 82 810 4.85e-87 292
Msa1176770 AT4G30020.1 31.926 758 422 26 49 741 82 810 4.85e-87 292
Msa1176770 AT4G30020.4 31.926 758 422 26 49 741 82 810 4.85e-87 292
Msa1176770 AT4G30020.2 31.926 758 422 26 49 741 82 810 4.85e-87 292
Msa1176770 AT1G32940.3 37.838 555 294 16 52 575 67 601 3.47e-86 285
Msa1176770 AT4G20430.3 30.931 763 423 26 53 743 119 849 5.13e-80 274
Msa1176770 AT4G20430.1 30.931 763 423 26 53 743 119 849 5.13e-80 274
Msa1176770 AT4G20430.2 31.544 745 418 25 53 743 119 825 9.11e-80 273
Msa1176770 AT5G44530.1 30.395 760 427 21 53 742 106 833 6.81e-78 268
Msa1176770 AT1G20160.3 37.284 464 241 14 52 487 67 508 1.51e-75 254
Msa1176770 AT1G30600.1 30.343 758 431 27 53 742 98 826 2.90e-74 258
Msa1176770 AT5G44530.2 29.682 785 425 22 53 742 106 858 4.33e-74 258
Msa1176770 AT1G62340.1 28.927 764 441 25 53 744 98 831 1.05e-69 245
Msa1176770 AT5G58840.2 35.227 440 232 9 51 487 71 460 1.21e-62 218
Msa1176770 AT5G44530.3 30.512 508 278 12 53 501 106 597 5.58e-49 183
Msa1176770 AT1G32980.1 45.026 191 95 4 524 711 3 186 1.31e-39 145
Msa1176770 AT5G59110.1 34.731 167 91 6 586 742 8 166 3.19e-20 89.0

Find 156 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTAAAACTCTCACTTTC+TGG 0.123218 8_1:+8940542 None:intergenic
CTTATTGAATACCAACTTAT+TGG 0.163433 8_1:+8938852 None:intergenic
TTGGCAATTTCTCCATTTAT+TGG 0.178870 8_1:+8939633 None:intergenic
AGTGATCTACAAATTGAAAT+TGG 0.200554 8_1:+8938696 None:intergenic
GCGATTGGATCTTCATTAAA+AGG 0.237595 8_1:+8940086 None:intergenic
TGGATTCATACCAAGCATTT+TGG 0.242139 8_1:+8940861 None:intergenic
GTCTTTATTAGTCCAATAAA+TGG 0.256298 8_1:-8939645 Msa1176770:CDS
GCTTGGCCAGCTTCTGATTA+TGG 0.258200 8_1:-8940605 Msa1176770:CDS
CAAAATAATGAAGTAGCTTT+TGG 0.261973 8_1:-8938778 Msa1176770:CDS
GAAGAGGTAGGGTTAGGGTT+AGG 0.262487 8_1:+8940803 None:intergenic
AAGAGGTAGGGTTAGGGTTA+GGG 0.278698 8_1:+8940804 None:intergenic
GGTACTTTGGACCGTGAATT+TGG 0.282385 8_1:-8939945 Msa1176770:CDS
TTATTGAATACCAACTTATT+GGG 0.287600 8_1:+8938853 None:intergenic
TGACTCAAATTCCTTCAAAA+TGG 0.291912 8_1:-8940511 Msa1176770:CDS
GTTACTCTTGATGTATGATT+TGG 0.297234 8_1:+8939614 None:intergenic
AAGCCCCTTTGTAGGGATTA+AGG 0.300761 8_1:+8940624 None:intergenic
AACTGTTGCTGCTGGTACTT+TGG 0.311678 8_1:-8939958 Msa1176770:CDS
AGGGTTAGGGTTATTGTTGT+TGG 0.344346 8_1:+8940817 None:intergenic
ACCGGTTTGTCTTCCTATAT+AGG 0.347316 8_1:-8939888 Msa1176770:CDS
GTTGACGGTGCGTCATTCTT+TGG 0.353936 8_1:-8940299 Msa1176770:CDS
GTGATCTACAAATTGAAATT+GGG 0.357841 8_1:+8938697 None:intergenic
TAACTGTTCTATGAAATTCT+TGG 0.361156 8_1:+8938950 None:intergenic
ATGGCATGCCCTCATGTTGC+TGG 0.376373 8_1:-8939348 Msa1176770:CDS
CCAGGGTCAATTGCTCTGTT+GGG 0.380293 8_1:+8939156 None:intergenic
ATTGGAGCCCTGCAGCTATT+AGG 0.385368 8_1:-8939293 Msa1176770:CDS
ATCTTAGAAGAGGTAGGGTT+AGG 0.391665 8_1:+8940797 None:intergenic
TCTACTGGAGCAGGTAATAA+TGG 0.391913 8_1:-8940023 Msa1176770:CDS
CCTGGTCTTGTTTATGATGT+TGG 0.393335 8_1:-8939138 Msa1176770:CDS
TGATTGTTCTAAACCTTCCT+TGG 0.393711 8_1:-8939034 Msa1176770:CDS
GGAAGGTTTAGAACAATCAT+TGG 0.393756 8_1:+8939038 None:intergenic
TGAAGAAATATAACCATGTA+AGG 0.396019 8_1:+8940700 None:intergenic
GACGTACTTTCAATATCATT+AGG 0.396460 8_1:-8940122 Msa1176770:CDS
CTTTCAATATCATTAGGCTT+TGG 0.398890 8_1:-8940116 Msa1176770:CDS
TGAAAGGAGCACATGCTGAT+TGG 0.414531 8_1:-8939311 Msa1176770:CDS
AGCAGAGAAATTTCCTATAT+AGG 0.414918 8_1:+8939875 None:intergenic
GTGTCATTGACACTGGTGTT+TGG 0.416087 8_1:-8940565 Msa1176770:CDS
TCATTCTTTGGTTATGCAAA+TGG 0.417117 8_1:-8940287 Msa1176770:CDS
ATCGACCCTAGGTGCTGGTT+TGG 0.423688 8_1:+8939539 None:intergenic
ACACACTCACCACAATTCAT+AGG 0.431468 8_1:-8940647 Msa1176770:CDS
ACATATGGACAACTATTTGA+TGG 0.433415 8_1:+8939498 None:intergenic
ACATACACCAATGTTATGAA+TGG 0.439500 8_1:-8940767 Msa1176770:CDS
ATATCAGGTTTCAACACATA+TGG 0.439686 8_1:+8939483 None:intergenic
AAGGGTGTGTTTGTGTCTAC+TGG 0.440723 8_1:-8940038 Msa1176770:CDS
AGCTACAAGTTGAGGATTGA+AGG 0.441780 8_1:-8938814 Msa1176770:CDS
GCTAGCATTACGCCTGTTGA+AGG 0.442795 8_1:-8938895 Msa1176770:CDS
GTACCAGGAGCTGTAATATC+AGG 0.442984 8_1:+8939468 None:intergenic
TGACCAGCTCCTTGTGCAAA+AGG 0.444735 8_1:+8939186 None:intergenic
ATGTTGGAAATGCTTCTTCA+AGG 0.448290 8_1:-8938978 Msa1176770:CDS
AGAAGTTTCAAGTGTGTGTC+AGG 0.450697 8_1:+8940674 None:intergenic
GGAGATGAAACTACATCTGC+AGG 0.454724 8_1:+8940203 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 8_1:-8938940 Msa1176770:CDS
CACACTTCAACAACAGCAGC+TGG 0.460137 8_1:-8940329 Msa1176770:CDS
TTGAGGGCTTCATGCTCTTG+AGG 0.461264 8_1:+8940725 None:intergenic
CCTGTGTTAATTCTTGAGTC+TGG 0.461981 8_1:-8939414 Msa1176770:CDS
ACCAGGGTCAATTGCTCTGT+TGG 0.462089 8_1:+8939155 None:intergenic
ATGTTTCAAGCAAATGTTGT+TGG 0.470137 8_1:-8939732 Msa1176770:CDS
AGTAATTACTTGATAAAGAG+TGG 0.472344 8_1:+8940841 None:intergenic
TCTTAGAAGAGGTAGGGTTA+GGG 0.473883 8_1:+8940798 None:intergenic
AAATCAGATGAAACTACATC+TGG 0.477776 8_1:+8940182 None:intergenic
GACAATTGTTGAACTAATGT+TGG 0.478169 8_1:+8940385 None:intergenic
CTCATAAAAGACATTGGAAA+AGG 0.484935 8_1:-8939225 Msa1176770:CDS
ATATTAGAAACTTGATCAGT+TGG 0.485721 8_1:+8939753 None:intergenic
ATTAACACAGGTACATTTGT+GGG 0.487421 8_1:+8939426 None:intergenic
GCTGGCCAAGCCCCTTTGTA+GGG 0.488080 8_1:+8940617 None:intergenic
ACAATTGTTGAACTAATGTT+GGG 0.489912 8_1:+8940386 None:intergenic
CTAACACGGTATCCTTCAAC+AGG 0.489929 8_1:+8938883 None:intergenic
ATTGCTGACCTAATAGCTGC+AGG 0.490658 8_1:+8939285 None:intergenic
AGCTGGCCAAGCCCCTTTGT+AGG 0.491317 8_1:+8940616 None:intergenic
TGCAATTGATGCCGCAGTAT+CGG 0.500686 8_1:-8940153 Msa1176770:CDS
TCCTATATAGGAAGACAAAC+CGG 0.500889 8_1:+8939887 None:intergenic
AAAGTAGCTATGTACAAGGT+TGG 0.502850 8_1:-8940236 Msa1176770:CDS
TAGGCCTTAATCCCTACAAA+GGG 0.504162 8_1:-8940628 Msa1176770:CDS
TTAATCCCTACAAAGGGGCT+TGG 0.508020 8_1:-8940622 Msa1176770:CDS
CGCTTGTCCCTCACCAACAT+TGG 0.511081 8_1:+8938927 None:intergenic
GTTACATCACATGGCAGGAT+GGG 0.515946 8_1:-8938756 Msa1176770:CDS
CAGGGTCAATTGCTCTGTTG+GGG 0.518214 8_1:+8939157 None:intergenic
GCAAAAGTGGCTATTGCGAT+TGG 0.518321 8_1:+8940071 None:intergenic
TAAGTATCCCACCAAATTCA+CGG 0.520946 8_1:+8939934 None:intergenic
CTTACTCAAACCAAAATGCT+TGG 0.531114 8_1:-8940871 Msa1176770:CDS
AGAAGCTAAGCTACAAGTTG+AGG 0.531800 8_1:-8938822 Msa1176770:CDS
TATGGCCAAGATGTTATTGT+TGG 0.534069 8_1:-8940587 Msa1176770:CDS
GGGATACTTACACTTGGTAA+TGG 0.534998 8_1:-8939921 Msa1176770:CDS
TGCCCTCATGTTGCTGGTGT+AGG 0.535967 8_1:-8939342 Msa1176770:CDS
AAACCTGATATTACAGCTCC+TGG 0.538191 8_1:-8939471 Msa1176770:CDS
AGACATATTTGATAATACTA+AGG 0.538939 8_1:-8939250 Msa1176770:CDS
TGGTACCAAACCAGCACCTA+GGG 0.541303 8_1:-8939544 Msa1176770:CDS
ACACGTGACACAGTTGGTCA+TGG 0.545709 8_1:-8940356 Msa1176770:CDS
GTCGATTATTATAGTTCAAG+AGG 0.545788 8_1:-8939522 Msa1176770:CDS
CAAAGTGAAGAGCAAGATTG+TGG 0.546284 8_1:-8939799 Msa1176770:CDS
GTGTTTGTGTCTACTGGAGC+AGG 0.550762 8_1:-8940032 Msa1176770:CDS
ATTGTTGGTGTCATTGACAC+TGG 0.551582 8_1:-8940572 Msa1176770:CDS
TATTGAATACCAACTTATTG+GGG 0.551614 8_1:+8938854 None:intergenic
TGATCTACAAATTGAAATTG+GGG 0.552684 8_1:+8938698 None:intergenic
AATTAACACAGGTACATTTG+TGG 0.554055 8_1:+8939425 None:intergenic
TAGTGTTATCCCCAATAAGT+TGG 0.554558 8_1:-8938863 Msa1176770:CDS
CTTTGGACCGTGAATTTGGT+GGG 0.554951 8_1:-8939941 Msa1176770:CDS
TGACACCAACAATAACATCT+TGG 0.556369 8_1:+8940582 None:intergenic
AAGGAACTCATAAAAGACAT+TGG 0.557100 8_1:-8939231 Msa1176770:CDS
CCAACATCATAAACAAGACC+AGG 0.558341 8_1:+8939138 None:intergenic
TGTTCTATGAAATTCTTGGA+TGG 0.563635 8_1:+8938954 None:intergenic
TAATAATCGACCCTAGGTGC+TGG 0.563768 8_1:+8939534 None:intergenic
TGTATAAATGATCTTAGAAG+AGG 0.565477 8_1:+8940787 None:intergenic
GGTTACATCACATGGCAGGA+TGG 0.566321 8_1:-8938757 Msa1176770:CDS
TATGCAAATGGAAGCGCAAG+AGG 0.566938 8_1:-8940275 Msa1176770:CDS
GAACTATAATAATCGACCCT+AGG 0.567994 8_1:+8939528 None:intergenic
TTTCAACAAAGGATTCTTGG+CGG 0.570052 8_1:-8940414 Msa1176770:CDS
TAGCTATGTACAAGGTTGGA+TGG 0.570141 8_1:-8940232 Msa1176770:CDS
ATTGGAAGAAGATCTTGTAA+TGG 0.574725 8_1:+8939056 None:intergenic
ATAGGCCTTAATCCCTACAA+AGG 0.575179 8_1:-8940629 Msa1176770:CDS
ACTAAAACCATTCATAACAT+TGG 0.575372 8_1:+8940760 None:intergenic
TAACTCTAACTCGGTTTCAA+CGG 0.576691 8_1:-8939595 Msa1176770:CDS
TCTTGGCCATAATCAGAAGC+TGG 0.576702 8_1:+8940599 None:intergenic
GCAGCTGGGAATCAAGTTGA+CGG 0.577538 8_1:-8940314 Msa1176770:CDS
CAAATTCCTTCAAAATGGAA+AGG 0.578000 8_1:-8940506 Msa1176770:CDS
TCAACGGCAAGCATGTCTCT+CGG 0.578246 8_1:-8939579 Msa1176770:CDS
GCTTAGCAATGTAGCACCAT+GGG 0.579967 8_1:-8939985 Msa1176770:CDS
TTTCAAGCAAATGTTGTTGG+AGG 0.580213 8_1:-8939729 Msa1176770:CDS
GAAGCCCTCAAAACCTTACA+TGG 0.582672 8_1:-8940713 Msa1176770:CDS
CACGTGACACAGTTGGTCAT+GGG 0.582724 8_1:-8940355 Msa1176770:CDS
AACAGTTACCAATGTTGGTG+AGG 0.584570 8_1:-8938935 Msa1176770:CDS
TGGGTGACAACTGTTGCTGC+TGG 0.585861 8_1:-8939966 Msa1176770:CDS
AAATGATCTTAGAAGAGGTA+GGG 0.589932 8_1:+8940792 None:intergenic
CATCAAGAGTAACTCTAACT+CGG 0.590851 8_1:-8939604 Msa1176770:CDS
GGTAATGGAGTCTCACTCAC+CGG 0.593516 8_1:-8939906 Msa1176770:CDS
TAAATGATCTTAGAAGAGGT+AGG 0.594636 8_1:+8940791 None:intergenic
TTGGTACCAAACCAGCACCT+AGG 0.594772 8_1:-8939545 Msa1176770:CDS
TTTGGTGGGATACTTACACT+TGG 0.597224 8_1:-8939927 Msa1176770:CDS
AGAAGGGTAATTAAGATCCA+AGG 0.600433 8_1:+8939017 None:intergenic
ACTTTGGACCGTGAATTTGG+TGG 0.602825 8_1:-8939942 Msa1176770:CDS
ATTGGACTAATAAAGACGGA+TGG 0.604019 8_1:+8939651 None:intergenic
GGATTAAGGCCTATGAATTG+TGG 0.606055 8_1:+8940638 None:intergenic
ATTTATTGGACTAATAAAGA+CGG 0.611338 8_1:+8939647 None:intergenic
GTCTAAAGTAGCTATGTACA+AGG 0.613437 8_1:-8940240 Msa1176770:CDS
TTGCTGACCTAATAGCTGCA+GGG 0.614320 8_1:+8939286 None:intergenic
AGCTTAGCAATGTAGCACCA+TGG 0.619584 8_1:-8939986 Msa1176770:CDS
ACAGTTACCAATGTTGGTGA+GGG 0.621956 8_1:-8938934 Msa1176770:CDS
GTTGCACAGAGATGAATGGT+TGG 0.622737 8_1:+8940460 None:intergenic
ATTGATGCCGCAGTATCGGA+CGG 0.624647 8_1:-8940149 Msa1176770:CDS
GCAGCAACAGTTGTCACCCA+TGG 0.625596 8_1:+8939969 None:intergenic
GCTCCTACACCAGCAACATG+AGG 0.628455 8_1:+8939339 None:intergenic
AACAGCACACGTGACACAGT+TGG 0.630171 8_1:-8940362 Msa1176770:CDS
TCGATTATTATAGTTCAAGA+GGG 0.630306 8_1:-8939521 Msa1176770:CDS
ACACTTCAACAACAGCAGCT+GGG 0.634517 8_1:-8940328 Msa1176770:CDS
GGGTAATTAAGATCCAAGGA+AGG 0.636054 8_1:+8939021 None:intergenic
GAGCAAGATTGTGGTTTGTG+AGG 0.641293 8_1:-8939790 Msa1176770:CDS
CTCCTACACCAGCAACATGA+GGG 0.641334 8_1:+8939340 None:intergenic
GAGATGAAACTACATCTGCA+GGG 0.655605 8_1:+8940204 None:intergenic
CCCAACAGAGCAATTGACCC+TGG 0.657581 8_1:-8939156 Msa1176770:CDS
GAAGCTAAGATTGATGTACC+AGG 0.668272 8_1:+8939453 None:intergenic
TGTGGTGAGAAGCCCTATTG+TGG 0.672366 8_1:-8938728 Msa1176770:CDS
TATTGGGGATAACACTAACA+CGG 0.699300 8_1:+8938869 None:intergenic
GATCTACAAATTGAAATTGG+GGG 0.717780 8_1:+8938699 None:intergenic
CCAGACTCAAGAATTAACAC+AGG 0.725464 8_1:+8939414 None:intergenic
CAACATCATAAACAAGACCA+GGG 0.726316 8_1:+8939139 None:intergenic
AGGCCTTAATCCCTACAAAG+GGG 0.730372 8_1:-8940627 Msa1176770:CDS
ATGGCAGGATGGGAAGCATG+TGG 0.747934 8_1:-8938746 Msa1176770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTCAAATTGTTTTCA+TGG - chr8_1:8939781-8939800 Msa1176770:CDS 15.0%
!!! TAATTTTCAAATTGTTTTCA+TGG - chr8_1:8939781-8939800 Msa1176770:CDS 15.0%
!! ATTTATTGGACTAATAAAGA+CGG + chr8_1:8939987-8940006 None:intergenic 20.0%
!!! AACAAGTTTAATGTTTTAAG+TGG - chr8_1:8940253-8940272 Msa1176770:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG - chr8_1:8940381-8940400 Msa1176770:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG + chr8_1:8940633-8940652 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG + chr8_1:8940634-8940653 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG - chr8_1:8940637-8940656 Msa1176770:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG + chr8_1:8940781-8940800 None:intergenic 20.0%
!! ATTTATTGGACTAATAAAGA+CGG + chr8_1:8939987-8940006 None:intergenic 20.0%
!!! AACAAGTTTAATGTTTTAAG+TGG - chr8_1:8940253-8940272 Msa1176770:CDS 20.0%
!!! AGACATATTTGATAATACTA+AGG - chr8_1:8940381-8940400 Msa1176770:CDS 20.0%
!! TGAAAAAAGCTATAAAAGAA+GGG + chr8_1:8940633-8940652 None:intergenic 20.0%
!! TTGAAAAAAGCTATAAAAGA+AGG + chr8_1:8940634-8940653 None:intergenic 20.0%
!!! TTTATAGCTTTTTTCAATGT+TGG - chr8_1:8940637-8940656 Msa1176770:CDS 20.0%
!! TTATTGAATACCAACTTATT+GGG + chr8_1:8940781-8940800 None:intergenic 20.0%
! AGTAATTACTTGATAAAGAG+TGG + chr8_1:8938793-8938812 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG + chr8_1:8938847-8938866 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG + chr8_1:8938874-8938893 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG + chr8_1:8938934-8938953 None:intergenic 25.0%
!!! AGTGAGAGTTTTAATGATAA+TGG - chr8_1:8939095-8939114 Msa1176770:CDS 25.0%
! ACAATTGTTGAACTAATGTT+GGG + chr8_1:8939248-8939267 None:intergenic 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG + chr8_1:8939635-8939654 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG + chr8_1:8939636-8939655 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG + chr8_1:8939881-8939900 None:intergenic 25.0%
! GTCTTTATTAGTCCAATAAA+TGG - chr8_1:8939986-8940005 Msa1176770:CDS 25.0%
! TCGATTATTATAGTTCAAGA+GGG - chr8_1:8940110-8940129 Msa1176770:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_1:8940684-8940703 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG + chr8_1:8940780-8940799 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG + chr8_1:8940782-8940801 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG + chr8_1:8940843-8940862 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG + chr8_1:8940844-8940863 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG - chr8_1:8940853-8940872 Msa1176770:CDS 25.0%
! AGTAATTACTTGATAAAGAG+TGG + chr8_1:8938793-8938812 None:intergenic 25.0%
! TGTATAAATGATCTTAGAAG+AGG + chr8_1:8938847-8938866 None:intergenic 25.0%
! ACTAAAACCATTCATAACAT+TGG + chr8_1:8938874-8938893 None:intergenic 25.0%
! TGAAGAAATATAACCATGTA+AGG + chr8_1:8938934-8938953 None:intergenic 25.0%
!!! AGTGAGAGTTTTAATGATAA+TGG - chr8_1:8939095-8939114 Msa1176770:CDS 25.0%
! ACAATTGTTGAACTAATGTT+GGG + chr8_1:8939248-8939267 None:intergenic 25.0%
!!! TTGCTAAGCTTTTTAAAGAA+GGG + chr8_1:8939635-8939654 None:intergenic 25.0%
!!! ATTGCTAAGCTTTTTAAAGA+AGG + chr8_1:8939636-8939655 None:intergenic 25.0%
! ATATTAGAAACTTGATCAGT+TGG + chr8_1:8939881-8939900 None:intergenic 25.0%
! GTCTTTATTAGTCCAATAAA+TGG - chr8_1:8939986-8940005 Msa1176770:CDS 25.0%
! TCGATTATTATAGTTCAAGA+GGG - chr8_1:8940110-8940129 Msa1176770:CDS 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_1:8940684-8940703 None:intergenic 25.0%
! TATTGAATACCAACTTATTG+GGG + chr8_1:8940780-8940799 None:intergenic 25.0%
! CTTATTGAATACCAACTTAT+TGG + chr8_1:8940782-8940801 None:intergenic 25.0%
!!! CATTATTTTGTGTCATTCTA+GGG + chr8_1:8940843-8940862 None:intergenic 25.0%
!!! TCATTATTTTGTGTCATTCT+AGG + chr8_1:8940844-8940863 None:intergenic 25.0%
!! CAAAATAATGAAGTAGCTTT+TGG - chr8_1:8940853-8940872 Msa1176770:CDS 25.0%
!!! TTTTGGTTTGAGTAAGGTTT+TGG + chr8_1:8938756-8938775 None:intergenic 30.0%
AAATGATCTTAGAAGAGGTA+GGG + chr8_1:8938842-8938861 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG + chr8_1:8938843-8938862 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG - chr8_1:8938864-8938883 Msa1176770:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG + chr8_1:8938925-8938944 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG + chr8_1:8938926-8938945 None:intergenic 30.0%
TCATTAAAACTCTCACTTTC+TGG + chr8_1:8939092-8939111 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG - chr8_1:8939120-8939139 Msa1176770:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG - chr8_1:8939125-8939144 Msa1176770:CDS 30.0%
CTGTGCAACAAAAAACTTAT+TGG - chr8_1:8939185-8939204 Msa1176770:CDS 30.0%
ACAAAAAACTTATTGGAGCT+AGG - chr8_1:8939192-8939211 Msa1176770:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG - chr8_1:8939214-8939233 Msa1176770:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG + chr8_1:8939249-8939268 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG - chr8_1:8939344-8939363 Msa1176770:CDS 30.0%
AAATCAGATGAAACTACATC+TGG + chr8_1:8939452-8939471 None:intergenic 30.0%
GACGTACTTTCAATATCATT+AGG - chr8_1:8939509-8939528 Msa1176770:CDS 30.0%
CTTTCAATATCATTAGGCTT+TGG - chr8_1:8939515-8939534 Msa1176770:CDS 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG + chr8_1:8939634-8939653 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG + chr8_1:8939759-8939778 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG - chr8_1:8939899-8939918 Msa1176770:CDS 30.0%
TTGGCAATTTCTCCATTTAT+TGG + chr8_1:8940001-8940020 None:intergenic 30.0%
GTTACTCTTGATGTATGATT+TGG + chr8_1:8940020-8940039 None:intergenic 30.0%
!!! TCTCTCGGATTAACATTTTT+TGG - chr8_1:8940067-8940086 Msa1176770:CDS 30.0%
GTCGATTATTATAGTTCAAG+AGG - chr8_1:8940109-8940128 Msa1176770:CDS 30.0%
ACATATGGACAACTATTTGA+TGG + chr8_1:8940136-8940155 None:intergenic 30.0%
ATATCAGGTTTCAACACATA+TGG + chr8_1:8940151-8940170 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG + chr8_1:8940208-8940227 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG + chr8_1:8940209-8940228 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG - chr8_1:8940264-8940283 Msa1176770:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG - chr8_1:8940400-8940419 Msa1176770:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG - chr8_1:8940406-8940425 Msa1176770:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG + chr8_1:8940578-8940597 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG + chr8_1:8940680-8940699 None:intergenic 30.0%
!!! TTTTGGTTTGAGTAAGGTTT+TGG + chr8_1:8938756-8938775 None:intergenic 30.0%
AAATGATCTTAGAAGAGGTA+GGG + chr8_1:8938842-8938861 None:intergenic 30.0%
TAAATGATCTTAGAAGAGGT+AGG + chr8_1:8938843-8938862 None:intergenic 30.0%
ACATACACCAATGTTATGAA+TGG - chr8_1:8938864-8938883 Msa1176770:CDS 30.0%
!! ATAACCATGTAAGGTTTTGA+GGG + chr8_1:8938925-8938944 None:intergenic 30.0%
! TATAACCATGTAAGGTTTTG+AGG + chr8_1:8938926-8938945 None:intergenic 30.0%
TCATTAAAACTCTCACTTTC+TGG + chr8_1:8939092-8939111 None:intergenic 30.0%
TGACTCAAATTCCTTCAAAA+TGG - chr8_1:8939120-8939139 Msa1176770:CDS 30.0%
CAAATTCCTTCAAAATGGAA+AGG - chr8_1:8939125-8939144 Msa1176770:CDS 30.0%
CTGTGCAACAAAAAACTTAT+TGG - chr8_1:8939185-8939204 Msa1176770:CDS 30.0%
ACAAAAAACTTATTGGAGCT+AGG - chr8_1:8939192-8939211 Msa1176770:CDS 30.0%
!! GTTTTTCAACAAAGGATTCT+TGG - chr8_1:8939214-8939233 Msa1176770:CDS 30.0%
GACAATTGTTGAACTAATGT+TGG + chr8_1:8939249-8939268 None:intergenic 30.0%
TCATTCTTTGGTTATGCAAA+TGG - chr8_1:8939344-8939363 Msa1176770:CDS 30.0%
AAATCAGATGAAACTACATC+TGG + chr8_1:8939452-8939471 None:intergenic 30.0%
GACGTACTTTCAATATCATT+AGG - chr8_1:8939509-8939528 Msa1176770:CDS 30.0%
CTTTCAATATCATTAGGCTT+TGG - chr8_1:8939515-8939534 Msa1176770:CDS 30.0%
!! TGCTAAGCTTTTTAAAGAAG+GGG + chr8_1:8939634-8939653 None:intergenic 30.0%
AGCAGAGAAATTTCCTATAT+AGG + chr8_1:8939759-8939778 None:intergenic 30.0%
ATGTTTCAAGCAAATGTTGT+TGG - chr8_1:8939899-8939918 Msa1176770:CDS 30.0%
TTGGCAATTTCTCCATTTAT+TGG + chr8_1:8940001-8940020 None:intergenic 30.0%
GTTACTCTTGATGTATGATT+TGG + chr8_1:8940020-8940039 None:intergenic 30.0%
!!! TCTCTCGGATTAACATTTTT+TGG - chr8_1:8940067-8940086 Msa1176770:CDS 30.0%
GTCGATTATTATAGTTCAAG+AGG - chr8_1:8940109-8940128 Msa1176770:CDS 30.0%
ACATATGGACAACTATTTGA+TGG + chr8_1:8940136-8940155 None:intergenic 30.0%
ATATCAGGTTTCAACACATA+TGG + chr8_1:8940151-8940170 None:intergenic 30.0%
ATTAACACAGGTACATTTGT+GGG + chr8_1:8940208-8940227 None:intergenic 30.0%
AATTAACACAGGTACATTTG+TGG + chr8_1:8940209-8940228 None:intergenic 30.0%
!! TGTTTTAAGTGGAACATCTA+TGG - chr8_1:8940264-8940283 Msa1176770:CDS 30.0%
AAGGAACTCATAAAAGACAT+TGG - chr8_1:8940400-8940419 Msa1176770:CDS 30.0%
CTCATAAAAGACATTGGAAA+AGG - chr8_1:8940406-8940425 Msa1176770:CDS 30.0%
ATTGGAAGAAGATCTTGTAA+TGG + chr8_1:8940578-8940597 None:intergenic 30.0%
TGTTCTATGAAATTCTTGGA+TGG + chr8_1:8940680-8940699 None:intergenic 30.0%
!!! CAAGCATTTTGGTTTGAGTA+AGG + chr8_1:8938762-8938781 None:intergenic 35.0%
CTTACTCAAACCAAAATGCT+TGG - chr8_1:8938760-8938779 Msa1176770:CDS 35.0%
! TGGATTCATACCAAGCATTT+TGG + chr8_1:8938773-8938792 None:intergenic 35.0%
TATGGCCAAGATGTTATTGT+TGG - chr8_1:8939044-8939063 Msa1176770:CDS 35.0%
TGACACCAACAATAACATCT+TGG + chr8_1:8939052-8939071 None:intergenic 35.0%
! AACTTGCCTTTCCATTTTGA+AGG + chr8_1:8939134-8939153 None:intergenic 35.0%
! TTTTGTTGCACAGAGATGAA+TGG + chr8_1:8939178-8939197 None:intergenic 35.0%
TTTCAACAAAGGATTCTTGG+CGG - chr8_1:8939217-8939236 Msa1176770:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG - chr8_1:8939391-8939410 Msa1176770:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG - chr8_1:8939395-8939414 Msa1176770:CDS 35.0%
GCGATTGGATCTTCATTAAA+AGG + chr8_1:8939548-8939567 None:intergenic 35.0%
! ACTTTTGCAGCTATGGAAAA+GGG - chr8_1:8939575-8939594 Msa1176770:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG + chr8_1:8939700-8939719 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG + chr8_1:8939747-8939766 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG - chr8_1:8939851-8939870 Msa1176770:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG - chr8_1:8939902-8939921 Msa1176770:CDS 35.0%
ATTGGACTAATAAAGACGGA+TGG + chr8_1:8939983-8940002 None:intergenic 35.0%
CATCAAGAGTAACTCTAACT+CGG - chr8_1:8940027-8940046 Msa1176770:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG - chr8_1:8940036-8940055 Msa1176770:CDS 35.0%
GAACTATAATAATCGACCCT+AGG + chr8_1:8940106-8940125 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG + chr8_1:8940495-8940514 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG + chr8_1:8940596-8940615 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG - chr8_1:8940597-8940616 Msa1176770:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG + chr8_1:8940617-8940636 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG - chr8_1:8940653-8940672 Msa1176770:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_1:8940691-8940710 Msa1176770:CDS 35.0%
TATTGGGGATAACACTAACA+CGG + chr8_1:8940765-8940784 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG - chr8_1:8940768-8940787 Msa1176770:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG - chr8_1:8940866-8940885 Msa1176770:CDS 35.0%
!!! CAAGCATTTTGGTTTGAGTA+AGG + chr8_1:8938762-8938781 None:intergenic 35.0%
CTTACTCAAACCAAAATGCT+TGG - chr8_1:8938760-8938779 Msa1176770:CDS 35.0%
! TGGATTCATACCAAGCATTT+TGG + chr8_1:8938773-8938792 None:intergenic 35.0%
TATGGCCAAGATGTTATTGT+TGG - chr8_1:8939044-8939063 Msa1176770:CDS 35.0%
TGACACCAACAATAACATCT+TGG + chr8_1:8939052-8939071 None:intergenic 35.0%
! AACTTGCCTTTCCATTTTGA+AGG + chr8_1:8939134-8939153 None:intergenic 35.0%
! TTTTGTTGCACAGAGATGAA+TGG + chr8_1:8939178-8939197 None:intergenic 35.0%
TTTCAACAAAGGATTCTTGG+CGG - chr8_1:8939217-8939236 Msa1176770:CDS 35.0%
! GTCTAAAGTAGCTATGTACA+AGG - chr8_1:8939391-8939410 Msa1176770:CDS 35.0%
AAAGTAGCTATGTACAAGGT+TGG - chr8_1:8939395-8939414 Msa1176770:CDS 35.0%
GCGATTGGATCTTCATTAAA+AGG + chr8_1:8939548-8939567 None:intergenic 35.0%
! ACTTTTGCAGCTATGGAAAA+GGG - chr8_1:8939575-8939594 Msa1176770:CDS 35.0%
TAAGTATCCCACCAAATTCA+CGG + chr8_1:8939700-8939719 None:intergenic 35.0%
TCCTATATAGGAAGACAAAC+CGG + chr8_1:8939747-8939766 None:intergenic 35.0%
! GTGGTTTGTGAGGATAAAAA+TGG - chr8_1:8939851-8939870 Msa1176770:CDS 35.0%
TTTCAAGCAAATGTTGTTGG+AGG - chr8_1:8939902-8939921 Msa1176770:CDS 35.0%
ATTGGACTAATAAAGACGGA+TGG + chr8_1:8939983-8940002 None:intergenic 35.0%
CATCAAGAGTAACTCTAACT+CGG - chr8_1:8940027-8940046 Msa1176770:CDS 35.0%
TAACTCTAACTCGGTTTCAA+CGG - chr8_1:8940036-8940055 Msa1176770:CDS 35.0%
GAACTATAATAATCGACCCT+AGG + chr8_1:8940106-8940125 None:intergenic 35.0%
CAACATCATAAACAAGACCA+GGG + chr8_1:8940495-8940514 None:intergenic 35.0%
! GGAAGGTTTAGAACAATCAT+TGG + chr8_1:8940596-8940615 None:intergenic 35.0%
! TGATTGTTCTAAACCTTCCT+TGG - chr8_1:8940597-8940616 Msa1176770:CDS 35.0%
AGAAGGGTAATTAAGATCCA+AGG + chr8_1:8940617-8940636 None:intergenic 35.0%
ATGTTGGAAATGCTTCTTCA+AGG - chr8_1:8940653-8940672 Msa1176770:CDS 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_1:8940691-8940710 Msa1176770:CDS 35.0%
TATTGGGGATAACACTAACA+CGG + chr8_1:8940765-8940784 None:intergenic 35.0%
TAGTGTTATCCCCAATAAGT+TGG - chr8_1:8940768-8940787 Msa1176770:CDS 35.0%
!! TAGCTTTTGGTTACATCACA+TGG - chr8_1:8940866-8940885 Msa1176770:CDS 35.0%
AGGGTTAGGGTTATTGTTGT+TGG + chr8_1:8938817-8938836 None:intergenic 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG + chr8_1:8938836-8938855 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG + chr8_1:8938837-8938856 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG + chr8_1:8938960-8938979 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG - chr8_1:8938984-8939003 Msa1176770:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG + chr8_1:8938996-8939015 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG - chr8_1:8939002-8939021 Msa1176770:CDS 40.0%
TAGGCCTTAATCCCTACAAA+GGG - chr8_1:8939003-8939022 Msa1176770:CDS 40.0%
!! ATTGTTGGTGTCATTGACAC+TGG - chr8_1:8939059-8939078 Msa1176770:CDS 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG - chr8_1:8939206-8939225 Msa1176770:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG - chr8_1:8939399-8939418 Msa1176770:CDS 40.0%
GAGATGAAACTACATCTGCA+GGG + chr8_1:8939430-8939449 None:intergenic 40.0%
!!! AATAGCCACTTTTGCAGCTA+TGG - chr8_1:8939568-8939587 Msa1176770:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+TGG + chr8_1:8939576-8939595 None:intergenic 40.0%
! CACTTTTGCAGCTATGGAAA+AGG - chr8_1:8939574-8939593 Msa1176770:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG - chr8_1:8939608-8939627 Msa1176770:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG - chr8_1:8939704-8939723 Msa1176770:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG - chr8_1:8939710-8939729 Msa1176770:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG - chr8_1:8939743-8939762 Msa1176770:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG - chr8_1:8939832-8939851 Msa1176770:CDS 40.0%
AAACCTGATATTACAGCTCC+TGG - chr8_1:8940160-8940179 Msa1176770:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG + chr8_1:8940181-8940200 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG + chr8_1:8940220-8940239 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG - chr8_1:8940217-8940236 Msa1176770:CDS 40.0%
CCAACATCATAAACAAGACC+AGG + chr8_1:8940496-8940515 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG - chr8_1:8940493-8940512 Msa1176770:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG + chr8_1:8940613-8940632 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_1:8940696-8940715 Msa1176770:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_1:8940697-8940716 Msa1176770:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG - chr8_1:8940809-8940828 Msa1176770:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG - chr8_1:8940817-8940836 Msa1176770:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG - chr8_1:8940870-8940889 Msa1176770:CDS 40.0%
AGGGTTAGGGTTATTGTTGT+TGG + chr8_1:8938817-8938836 None:intergenic 40.0%
TCTTAGAAGAGGTAGGGTTA+GGG + chr8_1:8938836-8938855 None:intergenic 40.0%
ATCTTAGAAGAGGTAGGGTT+AGG + chr8_1:8938837-8938856 None:intergenic 40.0%
! AGAAGTTTCAAGTGTGTGTC+AGG + chr8_1:8938960-8938979 None:intergenic 40.0%
ACACACTCACCACAATTCAT+AGG - chr8_1:8938984-8939003 Msa1176770:CDS 40.0%
GGATTAAGGCCTATGAATTG+TGG + chr8_1:8938996-8939015 None:intergenic 40.0%
ATAGGCCTTAATCCCTACAA+AGG - chr8_1:8939002-8939021 Msa1176770:CDS 40.0%
TAGGCCTTAATCCCTACAAA+GGG - chr8_1:8939003-8939022 Msa1176770:CDS 40.0%
!! ATTGTTGGTGTCATTGACAC+TGG - chr8_1:8939059-8939078 Msa1176770:CDS 40.0%
!! GGAGCTAGGTTTTTCAACAA+AGG - chr8_1:8939206-8939225 Msa1176770:CDS 40.0%
TAGCTATGTACAAGGTTGGA+TGG - chr8_1:8939399-8939418 Msa1176770:CDS 40.0%
GAGATGAAACTACATCTGCA+GGG + chr8_1:8939430-8939449 None:intergenic 40.0%
!!! AATAGCCACTTTTGCAGCTA+TGG - chr8_1:8939568-8939587 Msa1176770:CDS 40.0%
! CTTTTCCATAGCTGCAAAAG+TGG + chr8_1:8939576-8939595 None:intergenic 40.0%
! CACTTTTGCAGCTATGGAAA+AGG - chr8_1:8939574-8939593 Msa1176770:CDS 40.0%
TCTACTGGAGCAGGTAATAA+TGG - chr8_1:8939608-8939627 Msa1176770:CDS 40.0%
TTTGGTGGGATACTTACACT+TGG - chr8_1:8939704-8939723 Msa1176770:CDS 40.0%
GGGATACTTACACTTGGTAA+TGG - chr8_1:8939710-8939729 Msa1176770:CDS 40.0%
!! ACCGGTTTGTCTTCCTATAT+AGG - chr8_1:8939743-8939762 Msa1176770:CDS 40.0%
CAAAGTGAAGAGCAAGATTG+TGG - chr8_1:8939832-8939851 Msa1176770:CDS 40.0%
AAACCTGATATTACAGCTCC+TGG - chr8_1:8940160-8940179 Msa1176770:CDS 40.0%
GAAGCTAAGATTGATGTACC+AGG + chr8_1:8940181-8940200 None:intergenic 40.0%
CCAGACTCAAGAATTAACAC+AGG + chr8_1:8940220-8940239 None:intergenic 40.0%
CCTGTGTTAATTCTTGAGTC+TGG - chr8_1:8940217-8940236 Msa1176770:CDS 40.0%
CCAACATCATAAACAAGACC+AGG + chr8_1:8940496-8940515 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG - chr8_1:8940493-8940512 Msa1176770:CDS 40.0%
GGGTAATTAAGATCCAAGGA+AGG + chr8_1:8940613-8940632 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_1:8940696-8940715 Msa1176770:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_1:8940697-8940716 Msa1176770:CDS 40.0%
AGAAGCTAAGCTACAAGTTG+AGG - chr8_1:8940809-8940828 Msa1176770:CDS 40.0%
! AGCTACAAGTTGAGGATTGA+AGG - chr8_1:8940817-8940836 Msa1176770:CDS 40.0%
!! TTTTGGTTACATCACATGGC+AGG - chr8_1:8940870-8940889 Msa1176770:CDS 40.0%
AAGAGGTAGGGTTAGGGTTA+GGG + chr8_1:8938830-8938849 None:intergenic 45.0%
GAAGCCCTCAAAACCTTACA+TGG - chr8_1:8938918-8938937 Msa1176770:CDS 45.0%
AGGCCTTAATCCCTACAAAG+GGG - chr8_1:8939004-8939023 Msa1176770:CDS 45.0%
AAGCCCCTTTGTAGGGATTA+AGG + chr8_1:8939010-8939029 None:intergenic 45.0%
TTAATCCCTACAAAGGGGCT+TGG - chr8_1:8939009-8939028 Msa1176770:CDS 45.0%
TCTTGGCCATAATCAGAAGC+TGG + chr8_1:8939035-8939054 None:intergenic 45.0%
! GTGTCATTGACACTGGTGTT+TGG - chr8_1:8939066-8939085 Msa1176770:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG + chr8_1:8939174-8939193 None:intergenic 45.0%
ACACTTCAACAACAGCAGCT+GGG - chr8_1:8939303-8939322 Msa1176770:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG - chr8_1:8939356-8939375 Msa1176770:CDS 45.0%
GGAGATGAAACTACATCTGC+AGG + chr8_1:8939431-8939450 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG - chr8_1:8939478-8939497 Msa1176770:CDS 45.0%
GCAAAAGTGGCTATTGCGAT+TGG + chr8_1:8939563-8939582 None:intergenic 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG - chr8_1:8939593-8939612 Msa1176770:CDS 45.0%
AGCTTAGCAATGTAGCACCA+TGG - chr8_1:8939645-8939664 Msa1176770:CDS 45.0%
GCTTAGCAATGTAGCACCAT+GGG - chr8_1:8939646-8939665 Msa1176770:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG - chr8_1:8939673-8939692 Msa1176770:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG - chr8_1:8939686-8939705 Msa1176770:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG - chr8_1:8939689-8939708 Msa1176770:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG - chr8_1:8939690-8939709 Msa1176770:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG - chr8_1:8939841-8939860 Msa1176770:CDS 45.0%
TAATAATCGACCCTAGGTGC+TGG + chr8_1:8940100-8940119 None:intergenic 45.0%
GTACCAGGAGCTGTAATATC+AGG + chr8_1:8940166-8940185 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG - chr8_1:8940304-8940323 Msa1176770:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG - chr8_1:8940320-8940339 Msa1176770:CDS 45.0%
TTGCTGACCTAATAGCTGCA+GGG + chr8_1:8940348-8940367 None:intergenic 45.0%
ATTGCTGACCTAATAGCTGC+AGG + chr8_1:8940349-8940368 None:intergenic 45.0%
! GTAGCAACACCTTTTGCACA+AGG - chr8_1:8940436-8940455 Msa1176770:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG + chr8_1:8940751-8940770 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG - chr8_1:8940875-8940894 Msa1176770:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG + chr8_1:8940918-8940937 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG + chr8_1:8940919-8940938 None:intergenic 45.0%
AAGAGGTAGGGTTAGGGTTA+GGG + chr8_1:8938830-8938849 None:intergenic 45.0%
GAAGCCCTCAAAACCTTACA+TGG - chr8_1:8938918-8938937 Msa1176770:CDS 45.0%
AGGCCTTAATCCCTACAAAG+GGG - chr8_1:8939004-8939023 Msa1176770:CDS 45.0%
AAGCCCCTTTGTAGGGATTA+AGG + chr8_1:8939010-8939029 None:intergenic 45.0%
TTAATCCCTACAAAGGGGCT+TGG - chr8_1:8939009-8939028 Msa1176770:CDS 45.0%
TCTTGGCCATAATCAGAAGC+TGG + chr8_1:8939035-8939054 None:intergenic 45.0%
! GTGTCATTGACACTGGTGTT+TGG - chr8_1:8939066-8939085 Msa1176770:CDS 45.0%
GTTGCACAGAGATGAATGGT+TGG + chr8_1:8939174-8939193 None:intergenic 45.0%
ACACTTCAACAACAGCAGCT+GGG - chr8_1:8939303-8939322 Msa1176770:CDS 45.0%
! TATGCAAATGGAAGCGCAAG+AGG - chr8_1:8939356-8939375 Msa1176770:CDS 45.0%
GGAGATGAAACTACATCTGC+AGG + chr8_1:8939431-8939450 None:intergenic 45.0%
TGCAATTGATGCCGCAGTAT+CGG - chr8_1:8939478-8939497 Msa1176770:CDS 45.0%
GCAAAAGTGGCTATTGCGAT+TGG + chr8_1:8939563-8939582 None:intergenic 45.0%
! AAGGGTGTGTTTGTGTCTAC+TGG - chr8_1:8939593-8939612 Msa1176770:CDS 45.0%
AGCTTAGCAATGTAGCACCA+TGG - chr8_1:8939645-8939664 Msa1176770:CDS 45.0%
GCTTAGCAATGTAGCACCAT+GGG - chr8_1:8939646-8939665 Msa1176770:CDS 45.0%
AACTGTTGCTGCTGGTACTT+TGG - chr8_1:8939673-8939692 Msa1176770:CDS 45.0%
GGTACTTTGGACCGTGAATT+TGG - chr8_1:8939686-8939705 Msa1176770:CDS 45.0%
ACTTTGGACCGTGAATTTGG+TGG - chr8_1:8939689-8939708 Msa1176770:CDS 45.0%
CTTTGGACCGTGAATTTGGT+GGG - chr8_1:8939690-8939709 Msa1176770:CDS 45.0%
! GAGCAAGATTGTGGTTTGTG+AGG - chr8_1:8939841-8939860 Msa1176770:CDS 45.0%
TAATAATCGACCCTAGGTGC+TGG + chr8_1:8940100-8940119 None:intergenic 45.0%
GTACCAGGAGCTGTAATATC+AGG + chr8_1:8940166-8940185 None:intergenic 45.0%
!!! GGTGTAGGAGCACTTTTGAA+AGG - chr8_1:8940304-8940323 Msa1176770:CDS 45.0%
! TGAAAGGAGCACATGCTGAT+TGG - chr8_1:8940320-8940339 Msa1176770:CDS 45.0%
TTGCTGACCTAATAGCTGCA+GGG + chr8_1:8940348-8940367 None:intergenic 45.0%
ATTGCTGACCTAATAGCTGC+AGG + chr8_1:8940349-8940368 None:intergenic 45.0%
! GTAGCAACACCTTTTGCACA+AGG - chr8_1:8940436-8940455 Msa1176770:CDS 45.0%
CTAACACGGTATCCTTCAAC+AGG + chr8_1:8940751-8940770 None:intergenic 45.0%
GTTACATCACATGGCAGGAT+GGG - chr8_1:8940875-8940894 Msa1176770:CDS 45.0%
TGGGGGTAGTTACCACAATA+GGG + chr8_1:8940918-8940937 None:intergenic 45.0%
TTGGGGGTAGTTACCACAAT+AGG + chr8_1:8940919-8940938 None:intergenic 45.0%
GAAGAGGTAGGGTTAGGGTT+AGG + chr8_1:8938831-8938850 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG + chr8_1:8938909-8938928 None:intergenic 50.0%
GCTTGGCCAGCTTCTGATTA+TGG - chr8_1:8939026-8939045 Msa1176770:CDS 50.0%
AACAGCACACGTGACACAGT+TGG - chr8_1:8939269-8939288 Msa1176770:CDS 50.0%
ACACGTGACACAGTTGGTCA+TGG - chr8_1:8939275-8939294 Msa1176770:CDS 50.0%
CACGTGACACAGTTGGTCAT+GGG - chr8_1:8939276-8939295 Msa1176770:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG - chr8_1:8939302-8939321 Msa1176770:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG - chr8_1:8939317-8939336 Msa1176770:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG - chr8_1:8939332-8939351 Msa1176770:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG - chr8_1:8939482-8939501 Msa1176770:CDS 50.0%
GTGTTTGTGTCTACTGGAGC+AGG - chr8_1:8939599-8939618 Msa1176770:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG - chr8_1:8939725-8939744 Msa1176770:CDS 50.0%
TCAACGGCAAGCATGTCTCT+CGG - chr8_1:8940052-8940071 Msa1176770:CDS 50.0%
TTGGTACCAAACCAGCACCT+AGG - chr8_1:8940086-8940105 Msa1176770:CDS 50.0%
TGGTACCAAACCAGCACCTA+GGG - chr8_1:8940087-8940106 Msa1176770:CDS 50.0%
CTCCTACACCAGCAACATGA+GGG + chr8_1:8940294-8940313 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG - chr8_1:8940338-8940357 Msa1176770:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG - chr8_1:8940442-8940461 Msa1176770:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG + chr8_1:8940448-8940467 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG + chr8_1:8940477-8940496 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG + chr8_1:8940478-8940497 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG + chr8_1:8940479-8940498 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG - chr8_1:8940736-8940755 Msa1176770:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG - chr8_1:8940874-8940893 Msa1176770:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG - chr8_1:8940903-8940922 Msa1176770:CDS 50.0%
GAAGAGGTAGGGTTAGGGTT+AGG + chr8_1:8938831-8938850 None:intergenic 50.0%
TTGAGGGCTTCATGCTCTTG+AGG + chr8_1:8938909-8938928 None:intergenic 50.0%
GCTTGGCCAGCTTCTGATTA+TGG - chr8_1:8939026-8939045 Msa1176770:CDS 50.0%
AACAGCACACGTGACACAGT+TGG - chr8_1:8939269-8939288 Msa1176770:CDS 50.0%
ACACGTGACACAGTTGGTCA+TGG - chr8_1:8939275-8939294 Msa1176770:CDS 50.0%
CACGTGACACAGTTGGTCAT+GGG - chr8_1:8939276-8939295 Msa1176770:CDS 50.0%
CACACTTCAACAACAGCAGC+TGG - chr8_1:8939302-8939321 Msa1176770:CDS 50.0%
!! GCAGCTGGGAATCAAGTTGA+CGG - chr8_1:8939317-8939336 Msa1176770:CDS 50.0%
GTTGACGGTGCGTCATTCTT+TGG - chr8_1:8939332-8939351 Msa1176770:CDS 50.0%
! ATTGATGCCGCAGTATCGGA+CGG - chr8_1:8939482-8939501 Msa1176770:CDS 50.0%
GTGTTTGTGTCTACTGGAGC+AGG - chr8_1:8939599-8939618 Msa1176770:CDS 50.0%
!! GGTAATGGAGTCTCACTCAC+CGG - chr8_1:8939725-8939744 Msa1176770:CDS 50.0%
TCAACGGCAAGCATGTCTCT+CGG - chr8_1:8940052-8940071 Msa1176770:CDS 50.0%
TTGGTACCAAACCAGCACCT+AGG - chr8_1:8940086-8940105 Msa1176770:CDS 50.0%
TGGTACCAAACCAGCACCTA+GGG - chr8_1:8940087-8940106 Msa1176770:CDS 50.0%
CTCCTACACCAGCAACATGA+GGG + chr8_1:8940294-8940313 None:intergenic 50.0%
ATTGGAGCCCTGCAGCTATT+AGG - chr8_1:8940338-8940357 Msa1176770:CDS 50.0%
! ACACCTTTTGCACAAGGAGC+TGG - chr8_1:8940442-8940461 Msa1176770:CDS 50.0%
TGACCAGCTCCTTGTGCAAA+AGG + chr8_1:8940448-8940467 None:intergenic 50.0%
CAGGGTCAATTGCTCTGTTG+GGG + chr8_1:8940477-8940496 None:intergenic 50.0%
CCAGGGTCAATTGCTCTGTT+GGG + chr8_1:8940478-8940497 None:intergenic 50.0%
ACCAGGGTCAATTGCTCTGT+TGG + chr8_1:8940479-8940498 None:intergenic 50.0%
GCTAGCATTACGCCTGTTGA+AGG - chr8_1:8940736-8940755 Msa1176770:CDS 50.0%
GGTTACATCACATGGCAGGA+TGG - chr8_1:8940874-8940893 Msa1176770:CDS 50.0%
TGTGGTGAGAAGCCCTATTG+TGG - chr8_1:8940903-8940922 Msa1176770:CDS 50.0%
GTCAACTCCGTCCGATACTG+CGG + chr8_1:8939492-8939511 None:intergenic 55.0%
GCAGCAACAGTTGTCACCCA+TGG + chr8_1:8939665-8939684 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG - chr8_1:8939665-8939684 Msa1176770:CDS 55.0%
!! ATCGACCCTAGGTGCTGGTT+TGG + chr8_1:8940095-8940114 None:intergenic 55.0%
ATGGCATGCCCTCATGTTGC+TGG - chr8_1:8940283-8940302 Msa1176770:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG - chr8_1:8940289-8940308 Msa1176770:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG + chr8_1:8940295-8940314 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG - chr8_1:8940475-8940494 Msa1176770:CDS 55.0%
CGCTTGTCCCTCACCAACAT+TGG + chr8_1:8940707-8940726 None:intergenic 55.0%
! ATGGCAGGATGGGAAGCATG+TGG - chr8_1:8940885-8940904 Msa1176770:CDS 55.0%
GTCAACTCCGTCCGATACTG+CGG + chr8_1:8939492-8939511 None:intergenic 55.0%
GCAGCAACAGTTGTCACCCA+TGG + chr8_1:8939665-8939684 None:intergenic 55.0%
TGGGTGACAACTGTTGCTGC+TGG - chr8_1:8939665-8939684 Msa1176770:CDS 55.0%
!! ATCGACCCTAGGTGCTGGTT+TGG + chr8_1:8940095-8940114 None:intergenic 55.0%
ATGGCATGCCCTCATGTTGC+TGG - chr8_1:8940283-8940302 Msa1176770:CDS 55.0%
TGCCCTCATGTTGCTGGTGT+AGG - chr8_1:8940289-8940308 Msa1176770:CDS 55.0%
GCTCCTACACCAGCAACATG+AGG + chr8_1:8940295-8940314 None:intergenic 55.0%
CCCAACAGAGCAATTGACCC+TGG - chr8_1:8940475-8940494 Msa1176770:CDS 55.0%
CGCTTGTCCCTCACCAACAT+TGG + chr8_1:8940707-8940726 None:intergenic 55.0%
! ATGGCAGGATGGGAAGCATG+TGG - chr8_1:8940885-8940904 Msa1176770:CDS 55.0%
GCTGGCCAAGCCCCTTTGTA+GGG + chr8_1:8939017-8939036 None:intergenic 60.0%
AGCTGGCCAAGCCCCTTTGT+AGG + chr8_1:8939018-8939037 None:intergenic 60.0%
GCTGGCCAAGCCCCTTTGTA+GGG + chr8_1:8939017-8939036 None:intergenic 60.0%
AGCTGGCCAAGCCCCTTTGT+AGG + chr8_1:8939018-8939037 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 8938702 8940951 8938702 ID=Msa1176770;Name=Msa1176770
chr8_1 mRNA 8938702 8940951 8938702 ID=Msa1176770-mRNA-1;Parent=Msa1176770;Name=Msa1176770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|749
chr8_1 exon 8938702 8940951 8938702 ID=Msa1176770-mRNA-1:exon:3001;Parent=Msa1176770-mRNA-1
chr8_1 CDS 8938702 8940951 8938702 ID=Msa1176770-mRNA-1:cds;Parent=Msa1176770-mRNA-1
Gene Sequence

>Msa1176770

ATGGCTCACTCTTCTCATAACTATATCATTCATATGAATTTATCTGCTATGCCAAAACCTTACTCAAACCAAAATGCTTGGTATGAATCCACTCTTTATCAAGTAATTACTACCAACAACAATAACCCTAACCCTAACCCTACCTCTTCTAAGATCATTTATACATACACCAATGTTATGAATGGTTTTAGTGCTAATCTCTCACCTCAAGAGCATGAAGCCCTCAAAACCTTACATGGTTATATTTCTTCACAACCTGACACACACTTGAAACTTCTCACAACACACTCACCACAATTCATAGGCCTTAATCCCTACAAAGGGGCTTGGCCAGCTTCTGATTATGGCCAAGATGTTATTGTTGGTGTCATTGACACTGGTGTTTGGCCAGAAAGTGAGAGTTTTAATGATAATGGAATGACTCAAATTCCTTCAAAATGGAAAGGCAAGTTATGTCAATTTGAAAATACCAACCATTCATCTCTGTGCAACAAAAAACTTATTGGAGCTAGGTTTTTCAACAAAGGATTCTTGGCGGAAAATCCCAACATTAGTTCAACAATTGTCAACAGCACACGTGACACAGTTGGTCATGGGACACACACTTCAACAACAGCAGCTGGGAATCAAGTTGACGGTGCGTCATTCTTTGGTTATGCAAATGGAAGCGCAAGAGGAATAGCTACATTGTCTAAAGTAGCTATGTACAAGGTTGGATGGACGAACCCTGCAGATGTAGTTTCATCTCCAGATGTAGTTTCATCTGATTTATTAGCTGCAATTGATGCCGCAGTATCGGACGGAGTTGACGTACTTTCAATATCATTAGGCTTTGGCGATCTACCTTTTAATGAAGATCCAATCGCAATAGCCACTTTTGCAGCTATGGAAAAGGGTGTGTTTGTGTCTACTGGAGCAGGTAATAATGGCCCCTTCTTTAAAAAGCTTAGCAATGTAGCACCATGGGTGACAACTGTTGCTGCTGGTACTTTGGACCGTGAATTTGGTGGGATACTTACACTTGGTAATGGAGTCTCACTCACCGGTTTGTCTTCCTATATAGGAAATTTCTCTGCTAGTAATTTTCAAATTGTTTTCATGGATATGTGTGAAAATGTTACAGAATTAATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAGGATAAAAATGGAGATCCAACTGATCAAGTTTCTAATATGTTTCAAGCAAATGTTGTTGGAGGTGTTTTCATATCAAATATCACAGAAATAAATGATATGATTTTAGACTTGAATTTTCCATCCGTCTTTATTAGTCCAATAAATGGAGAAATTGCCAAATCATACATCAAGAGTAACTCTAACTCGGTTTCAACGGCAAGCATGTCTCTCGGATTAACATTTTTTGGTACCAAACCAGCACCTAGGGTCGATTATTATAGTTCAAGAGGGCCATCAAATAGTTGTCCATATGTGTTGAAACCTGATATTACAGCTCCTGGTACATCAATCTTAGCTTCATATCCCACAAATGTACCTGTGTTAATTCTTGAGTCTGGTAATAAAGTCTTCAACAAGTTTAATGTTTTAAGTGGAACATCTATGGCATGCCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCACATGCTGATTGGAGCCCTGCAGCTATTAGGTCAGCAATGATGACAACATCAGACATATTTGATAATACTAAGGAACTCATAAAAGACATTGGAAAAGGTAACAACGTAGCAACACCTTTTGCACAAGGAGCTGGTCATATCAACCCCAACAGAGCAATTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGTTCTAAACCTTCCTTGGATCTTAATTACCCTTCTTTTATAGCTTTTTTCAATGTTGGAAATGCTTCTTCAAGGACCATCCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGACAAGCGATTTATGTTGCTAGCATTACGCCTGTTGAAGGATACCGTGTTAGTGTTATCCCCAATAAGTTGGTATTCAATAAGAAGAGTGAGAAGCTAAGCTACAAGTTGAGGATTGAAGGCCCTAGAATGACACAAAATAATGAAGTAGCTTTTGGTTACATCACATGGCAGGATGGGAAGCATGTGGTGAGAAGCCCTATTGTGGTAACTACCCCCAATTTCAATTTGTAG
Protein sequence

>Msa1176770

MAHSSHNYIIHMNLSAMPKPYSNQNAWYESTLYQVITTNNNNPNPNPTSSKIIYTYTNVMNGFSANLSPQEHEALKTLHGYISSQPDTHLKLLTTHSPQFIGLNPYKGAWPASDYGQDVIVGVIDTGVWPESESFNDNGMTQIPSKWKGKLCQFENTNHSSLCNKKLIGARFFNKGFLAENPNISSTIVNSTRDTVGHGTHTSTTAAGNQVDGASFFGYANGSARGIATLSKVAMYKVGWTNPADVVSSPDVVSSDLLAAIDAAVSDGVDVLSISLGFGDLPFNEDPIAIATFAAMEKGVFVSTGAGNNGPFFKKLSNVAPWVTTVAAGTLDREFGGILTLGNGVSLTGLSSYIGNFSASNFQIVFMDMCENVTELIKVKSKIVVCEDKNGDPTDQVSNMFQANVVGGVFISNITEINDMILDLNFPSVFISPINGEIAKSYIKSNSNSVSTASMSLGLTFFGTKPAPRVDYYSSRGPSNSCPYVLKPDITAPGTSILASYPTNVPVLILESGNKVFNKFNVLSGTSMACPHVAGVGALLKGAHADWSPAAIRSAMMTTSDIFDNTKELIKDIGKGNNVATPFAQGAGHINPNRAIDPGLVYDVGVQDYVNLLCALNFTQKNITTITRSSSNDCSKPSLDLNYPSFIAFFNVGNASSRTIQEFHRTVTNVGEGQAIYVASITPVEGYRVSVIPNKLVFNKKSEKLSYKLRIEGPRMTQNNEVAFGYITWQDGKHVVRSPIVVTTPNFNL*