AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1317900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317900 MtrunA17_Chr8g0348471 97.207 358 10 0 1 358 1 358 0.0 718
Msa1317900 MtrunA17_Chr7g0248471 67.227 357 111 3 1 357 1 351 1.97e-172 483
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317900 AT2G46080.1 58.924 353 139 3 1 353 1 347 6.30e-143 409
Msa1317900 AT1G01550.1 55.030 338 140 4 1 338 1 326 4.05e-122 356
Msa1317900 AT1G01550.2 55.030 338 140 4 1 338 1 326 4.05e-122 356
Msa1317900 AT4G01360.1 38.873 355 183 8 18 355 10 347 7.59e-71 225
Msa1317900 AT3G61500.1 42.857 168 89 3 20 185 13 175 5.93e-31 119
Msa1317900 AT3G61500.2 43.590 156 83 2 33 186 24 176 2.74e-30 118

Find 120 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTGGTTTGTTATATTTA+AGG 0.116593 8_4:+19480195 Msa1317900:three_prime_UTR
ATTTGGTGTCTAAAGAAATT+TGG 0.166401 8_4:-19477223 None:intergenic
AACCGTTCTTTCTTCCCTTT+TGG 0.168435 8_4:+19479070 Msa1317900:CDS
AGGATTTCATCCTTGCTTTC+AGG 0.187959 8_4:-19479205 None:intergenic
GTGCTACATTTCTCAATTCT+AGG 0.226753 8_4:-19479535 None:intergenic
TTTGGTGTCTAAAGAAATTT+GGG 0.276129 8_4:-19477222 None:intergenic
GAAAAGGTTAGATAGAAATT+TGG 0.293640 8_4:-19477240 None:intergenic
TTGAGCTACCCGTGAGTGTT+TGG 0.296050 8_4:+19479305 Msa1317900:CDS
GTAGCTCAAGATCAGTTATA+AGG 0.296998 8_4:-19479291 None:intergenic
TTGAAGACTGTTGAGGAATT+AGG 0.327051 8_4:+19479925 Msa1317900:CDS
AACGGTTTGGGTGTGGATCC+TGG 0.338374 8_4:-19479054 None:intergenic
CTCATCAAAGTCGTTTCTTC+GGG 0.357220 8_4:+19479465 Msa1317900:CDS
ATTTGGTTTGTTATATTTAA+GGG 0.360806 8_4:+19480196 Msa1317900:three_prime_UTR
ATAATACACTAGTCTAATTC+TGG 0.364219 8_4:+19480119 Msa1317900:exon
CCTCATCAAAGTCGTTTCTT+CGG 0.377060 8_4:+19479464 Msa1317900:CDS
TTGCTATCGTCTCTGAGGTT+TGG 0.380646 8_4:+19480039 Msa1317900:CDS
CTACTTGCTGGTCTATGTTT+CGG 0.383275 8_4:-19480089 None:intergenic
CTGGTAGTTGTTAATGTGCT+GGG 0.387713 8_4:+19480138 Msa1317900:three_prime_UTR
AAGTGTGCCTTGCACAATTT+AGG 0.389595 8_4:+19479436 Msa1317900:CDS
TTAAATATAACAAACCAAAT+AGG 0.390264 8_4:-19480193 None:intergenic
CTTTCTGATTCTCTAATCTC+AGG 0.393301 8_4:+19477264 Msa1317900:five_prime_UTR
TAAATGAGGAAATTAGAGTT+AGG 0.394328 8_4:+19479779 Msa1317900:CDS
TTCTTGCTCAACTTTGTCTT+CGG 0.412172 8_4:-19479896 None:intergenic
TTGGGTTACGGGAGGACACG+TGG 0.415442 8_4:-19477102 None:intergenic
GATAAAGTAACGGGGTTTGA+AGG 0.417523 8_4:-19477129 None:intergenic
TCTGGTAGTTGTTAATGTGC+TGG 0.419261 8_4:+19480137 Msa1317900:three_prime_UTR
TTGCAAGGAGATCCATTCCT+TGG 0.419978 8_4:-19479969 None:intergenic
ATTTACACCACCTTGGATAG+TGG 0.424354 8_4:-19479872 None:intergenic
TTATGTGACTTTGTCCGAAA+AGG 0.431269 8_4:-19479097 None:intergenic
TGAGCTACCCGTGAGTGTTT+GGG 0.433640 8_4:+19479306 Msa1317900:CDS
TTTCGGACAAAGTCACATAA+AGG 0.434959 8_4:+19479100 Msa1317900:CDS
TTGCATCAAAACCTTACCTT+TGG 0.435215 8_4:-19479611 None:intergenic
TGAGTGTTTGGGATGACAAA+TGG 0.445686 8_4:+19479317 Msa1317900:CDS
TTCTGTAAGCCTTTAAAAGC+AGG 0.447997 8_4:-19479751 None:intergenic
GAGCTTTCTCGTCTGAATCA+AGG 0.448368 8_4:+19479400 Msa1317900:CDS
ATGTGCCTGACATGCATTCA+TGG 0.449122 8_4:+19479725 Msa1317900:CDS
ACCATTCTAGATGGTCTTGT+AGG 0.450952 8_4:+19479556 Msa1317900:CDS
TGCAAGGAGATCCATTCCTT+GGG 0.451475 8_4:-19479968 None:intergenic
GGCGCCCATGAATGCATGTC+AGG 0.451880 8_4:-19479730 None:intergenic
ATTATCAGTAAACTACTTGC+TGG 0.454398 8_4:-19480101 None:intergenic
AGAAACGACTTTGATGAGGC+TGG 0.457208 8_4:-19479460 None:intergenic
CAGTTACTTGCAGTACTACA+TGG 0.458895 8_4:+19479142 Msa1317900:CDS
TGCAGTACTACATGGTTTCG+AGG 0.460694 8_4:+19479150 Msa1317900:CDS
AAATGTAGCACCATTCTAGA+TGG 0.460812 8_4:+19479547 Msa1317900:CDS
TTCAAAGAAGTTGCTAGACT+TGG 0.464628 8_4:+19479702 Msa1317900:CDS
ATGAAATCCTCAGCTTGTCT+TGG 0.465634 8_4:+19479218 Msa1317900:CDS
TGTTATATTTAAGGGTAGCA+TGG 0.466535 8_4:+19480204 Msa1317900:three_prime_UTR
TAGAGAATCAGAAAGGGAAA+AGG 0.466729 8_4:-19477256 None:intergenic
GTCCGAAAAGGATTCCCAAA+AGG 0.468191 8_4:-19479085 None:intergenic
AAAGGGAAGAAAGAACGGTT+TGG 0.468817 8_4:-19479067 None:intergenic
TGCTACATTTCTCAATTCTA+GGG 0.473899 8_4:-19479534 None:intergenic
CTACATTAGCAGAGAGGCTA+AGG 0.476706 8_4:+19479173 Msa1317900:CDS
GTTATATTTAAGGGTAGCAT+GGG 0.480669 8_4:+19480205 Msa1317900:three_prime_UTR
TCCGAAAAGGATTCCCAAAA+GGG 0.485409 8_4:-19479084 None:intergenic
CTTACAGAATCTTGTAAATG+AGG 0.487402 8_4:+19479765 Msa1317900:CDS
CATGTTCTTTACTCGATGAC+TGG 0.490294 8_4:+19479488 Msa1317900:CDS
AAGGGAAGAAAGAACGGTTT+GGG 0.492118 8_4:-19479066 None:intergenic
GCAGTAAATGAGTCGTTCCC+AGG 0.497046 8_4:+19479036 Msa1317900:intron
TAGCTCAAGATCAGTTATAA+GGG 0.500951 8_4:-19479290 None:intergenic
ACTGTAAATGATCGTGTCGT+TGG 0.506521 8_4:+19480066 Msa1317900:CDS
CTCCTTGCAAAGGGAGTGGA+TGG 0.507754 8_4:+19479982 Msa1317900:CDS
AATAATTAACAAGGTACTGT+AGG 0.510678 8_4:-19480333 None:intergenic
ACGGTTTGGGTGTGGATCCT+GGG 0.514469 8_4:-19479053 None:intergenic
TGAGATTAGAGAATCAGAAA+GGG 0.516014 8_4:-19477262 None:intergenic
AGGATCACTTGATCTTCCTA+AGG 0.519671 8_4:+19479576 Msa1317900:CDS
GAAATTAGAGTTAGGTTCTC+CGG 0.520380 8_4:+19479787 Msa1317900:CDS
CAGCTTGTCTTGGATGACTT+CGG 0.520950 8_4:+19479228 Msa1317900:CDS
CTGAGATTAGAGAATCAGAA+AGG 0.523833 8_4:-19477263 None:intergenic
CTTCGGTATTTACACCACCT+TGG 0.523873 8_4:-19479879 None:intergenic
AAGAAAGAACGGTTTGGGTG+TGG 0.525803 8_4:-19479061 None:intergenic
CACGACTAGTCAAAACTGCT+TGG 0.526184 8_4:-19480011 None:intergenic
TGGTAGTTGTTAATGTGCTG+GGG 0.526702 8_4:+19480139 Msa1317900:three_prime_UTR
CTTAAATGTATATGTGTGAG+TGG 0.530987 8_4:+19480259 Msa1317900:three_prime_UTR
ATAAAGTAACGGGGTTTGAA+GGG 0.537049 8_4:-19477128 None:intergenic
GAGTGTTTGGGATGACAAAT+GGG 0.539560 8_4:+19479318 Msa1317900:CDS
TGGGTTACGGGAGGACACGT+GGG 0.546538 8_4:-19477101 None:intergenic
GAAGCTTATGCCTGAAAGCA+AGG 0.548172 8_4:+19479195 Msa1317900:CDS
GGTAGTTGTTAATGTGCTGG+GGG 0.548282 8_4:+19480140 Msa1317900:three_prime_UTR
TTAAATGTATATGTGTGAGT+GGG 0.549709 8_4:+19480260 Msa1317900:three_prime_UTR
GGATCTCCTTGCAAAGGGAG+TGG 0.550124 8_4:+19479978 Msa1317900:CDS
TTTACACCACCTTGGATAGT+GGG 0.553081 8_4:-19479871 None:intergenic
GGAATGGATCTCCTTGCAAA+GGG 0.556996 8_4:+19479973 Msa1317900:CDS
TCCCAAAAGGGAAGAAAGAA+CGG 0.561151 8_4:-19479072 None:intergenic
GAAACGACTTTGATGAGGCT+GGG 0.565221 8_4:-19479459 None:intergenic
TTAAGGGTAGCATGGGTGGT+AGG 0.568025 8_4:+19480212 Msa1317900:three_prime_UTR
TTGTCATCCCAAACACTCAC+GGG 0.570811 8_4:-19479313 None:intergenic
GTAGTACTGCAAGTAACTGT+GGG 0.572158 8_4:-19479138 None:intergenic
GAGTTATATCCCACTATCCA+AGG 0.574910 8_4:+19479862 Msa1317900:CDS
ATATTTAAGGGTAGCATGGG+TGG 0.577356 8_4:+19480208 Msa1317900:three_prime_UTR
TCCTACAAGACCATCTAGAA+TGG 0.579676 8_4:-19479557 None:intergenic
AGGAATGGATCTCCTTGCAA+AGG 0.587585 8_4:+19479972 Msa1317900:CDS
AACCATCCACTCCCTTTGCA+AGG 0.590151 8_4:-19479984 None:intergenic
TAGGGTTCTTAGCATTAATG+TGG 0.590455 8_4:-19479516 None:intergenic
AGAGAAGCTTTCCCAAGGAA+TGG 0.590563 8_4:+19479957 Msa1317900:CDS
GGTTACGGGAGGACACGTGG+GGG 0.591470 8_4:-19477099 None:intergenic
ATCACATTTGAAGACTGTTG+AGG 0.597845 8_4:+19479918 Msa1317900:CDS
AGCTGTTGACGCTGTTGTGA+AGG 0.598706 8_4:+19479840 Msa1317900:CDS
GTTCTTTACTCGATGACTGG+AGG 0.600909 8_4:+19479491 Msa1317900:CDS
TGTGCCTGACATGCATTCAT+GGG 0.608851 8_4:+19479726 Msa1317900:CDS
TTTGTCATCCCAAACACTCA+CGG 0.620658 8_4:-19479314 None:intergenic
GGCTGGGCCTAAATTGTGCA+AGG 0.623051 8_4:-19479443 None:intergenic
ACACTTTGCTATCGTCTCTG+AGG 0.623338 8_4:+19480034 Msa1317900:CDS
AAGTCATCCAAGACAAGCTG+AGG 0.623900 8_4:-19479225 None:intergenic
TGTAGTACTGCAAGTAACTG+TGG 0.625004 8_4:-19479139 None:intergenic
GCAAGCTATGTATGGAGTCA+AGG 0.627369 8_4:+19479630 Msa1317900:CDS
TTAGAGTTAGGTTCTCCGGT+GGG 0.628606 8_4:+19479791 Msa1317900:CDS
TTGTGCAAGGCACACTTAAG+CGG 0.629745 8_4:-19479430 None:intergenic
ATTAGAGTTAGGTTCTCCGG+TGG 0.639898 8_4:+19479790 Msa1317900:CDS
CAATACAGAAAATTTCCCAC+CGG 0.653582 8_4:-19479806 None:intergenic
GTAGTTGTTAATGTGCTGGG+GGG 0.654841 8_4:+19480141 Msa1317900:three_prime_UTR
GCTGCAGAGAAGCTTTCCCA+AGG 0.657770 8_4:+19479952 Msa1317900:CDS
CCGAAGAAACGACTTTGATG+AGG 0.660900 8_4:-19479464 None:intergenic
CGGACAAAGTCACATAAAGG+CGG 0.670493 8_4:+19479103 Msa1317900:CDS
TAAATGTATATGTGTGAGTG+GGG 0.680520 8_4:+19480261 Msa1317900:three_prime_UTR
GACTGTTGAGGAATTAGGCG+TGG 0.680712 8_4:+19479930 Msa1317900:CDS
TACGAGCAAAATAATTAACA+AGG 0.682538 8_4:-19480342 None:intergenic
AGCTATGTATGGAGTCAAGG+TGG 0.695929 8_4:+19479633 Msa1317900:CDS
TCGAGGCTACATTAGCAGAG+AGG 0.703141 8_4:+19479167 Msa1317900:CDS
TAGTACTGCAAGTAACTGTG+GGG 0.765299 8_4:-19479137 None:intergenic
TTATATCCCACTATCCAAGG+TGG 0.780218 8_4:+19479865 Msa1317900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAATTTGATGATTATA+AGG + chr8_4:19477525-19477544 Msa1317900:intron 10.0%
!!! GTTTAAAGTTTTGATTTTTT+TGG + chr8_4:19477567-19477586 Msa1317900:intron 15.0%
!!! ATATTAAAACTATGTTTTTG+CGG + chr8_4:19478496-19478515 Msa1317900:intron 15.0%
!! TTAAATATAACAAACCAAAT+AGG - chr8_4:19480196-19480215 None:intergenic 15.0%
!!! TATTTGGTTTGTTATATTTA+AGG + chr8_4:19480195-19480214 Msa1317900:three_prime_UTR 15.0%
!!! ATTTGGTTTGTTATATTTAA+GGG + chr8_4:19480196-19480215 Msa1317900:three_prime_UTR 15.0%
!!! ATTTTTGTTGAAGATAAGAA+GGG - chr8_4:19477164-19477183 None:intergenic 20.0%
!!! TTTGTATTTTGGTTTTCATT+AGG + chr8_4:19477466-19477485 Msa1317900:intron 20.0%
!! ATTATAAGGTTTGAATTTGA+TGG + chr8_4:19477539-19477558 Msa1317900:intron 20.0%
!!! TTTGGTTTTTAATACTTGAT+TGG + chr8_4:19477585-19477604 Msa1317900:intron 20.0%
!!! TTGGTTTTTAATACTTGATT+GGG + chr8_4:19477586-19477605 Msa1317900:intron 20.0%
!!! TCTTTTGAAATCAATTATCA+AGG + chr8_4:19477738-19477757 Msa1317900:intron 20.0%
!! AACCTTAATTAAAATTCACA+AGG - chr8_4:19477807-19477826 None:intergenic 20.0%
!! AGATTTAAACAAGTTCAAAT+TGG - chr8_4:19477902-19477921 None:intergenic 20.0%
!!! TTAAATCTTATGATTTTGAC+TGG + chr8_4:19477914-19477933 Msa1317900:intron 20.0%
!! ATTTCAATGTTAAAAAGAAC+TGG + chr8_4:19478831-19478850 Msa1317900:intron 20.0%
!!! CTGTTTGTATTTTTAGTATT+TGG + chr8_4:19480169-19480188 Msa1317900:three_prime_UTR 20.0%
!! TTTTTGTTGAAGATAAGAAG+GGG - chr8_4:19477163-19477182 None:intergenic 25.0%
!! GATTTTTGTTGAAGATAAGA+AGG - chr8_4:19477165-19477184 None:intergenic 25.0%
!!! TTTGGTGTCTAAAGAAATTT+GGG - chr8_4:19477225-19477244 None:intergenic 25.0%
!!! ATTTGGTGTCTAAAGAAATT+TGG - chr8_4:19477226-19477245 None:intergenic 25.0%
! GAAAAGGTTAGATAGAAATT+TGG - chr8_4:19477243-19477262 None:intergenic 25.0%
! TGATGATTTATGATTCTGTT+TGG + chr8_4:19477381-19477400 Msa1317900:intron 25.0%
!!! GGTTTGACTTTTTTGTATTT+TGG + chr8_4:19477455-19477474 Msa1317900:intron 25.0%
!! TTAATACTTGATTGGGTTTT+TGG + chr8_4:19477593-19477612 Msa1317900:intron 25.0%
!!! TTTTGGTTTTAGATCTGAAA+AGG + chr8_4:19477610-19477629 Msa1317900:intron 25.0%
!! TTAGATCTGAAAAGGTTTTA+TGG + chr8_4:19477618-19477637 Msa1317900:intron 25.0%
!!! TAGATCTGAAAAGGTTTTAT+GGG + chr8_4:19477619-19477638 Msa1317900:intron 25.0%
!!! GTCAACGGATTATTTTTTTA+TGG + chr8_4:19477652-19477671 Msa1317900:intron 25.0%
!! TCAATTATCAAGGTAGATTT+TGG + chr8_4:19477748-19477767 Msa1317900:intron 25.0%
!!! TGCCTTGTGAATTTTAATTA+AGG + chr8_4:19477802-19477821 Msa1317900:intron 25.0%
!! AAGTTTGTTTCAATTCAGTT+TGG - chr8_4:19477858-19477877 None:intergenic 25.0%
! AACTGAATTGAAACAAACTT+CGG + chr8_4:19477858-19477877 Msa1317900:intron 25.0%
!!! TTTTGACTGGATTTTTGATT+TGG + chr8_4:19477927-19477946 Msa1317900:intron 25.0%
! ATAGCTTCTAGATCTATTAA+GGG - chr8_4:19478162-19478181 None:intergenic 25.0%
!! ATTGTTGATTGTTGTACATA+GGG - chr8_4:19478693-19478712 None:intergenic 25.0%
! TAAATGAGGAAATTAGAGTT+AGG + chr8_4:19479779-19479798 Msa1317900:CDS 25.0%
!! ATAATACACTAGTCTAATTC+TGG + chr8_4:19480119-19480138 Msa1317900:exon 25.0%
!! TTTTAGTATTTGGTCCTATT+TGG + chr8_4:19480179-19480198 Msa1317900:three_prime_UTR 25.0%
! TTAAATGTATATGTGTGAGT+GGG + chr8_4:19480260-19480279 Msa1317900:three_prime_UTR 25.0%
!!! AATAATTAACAAGGTACTGT+AGG - chr8_4:19480336-19480355 None:intergenic 25.0%
!!! GTAGTTTTGATAAAGTAACG+GGG - chr8_4:19477140-19477159 None:intergenic 30.0%
!!! GGTAGTTTTGATAAAGTAAC+GGG - chr8_4:19477141-19477160 None:intergenic 30.0%
!!! GGGTAGTTTTGATAAAGTAA+CGG - chr8_4:19477142-19477161 None:intergenic 30.0%
! TTTTGTTGAAGATAAGAAGG+GGG - chr8_4:19477162-19477181 None:intergenic 30.0%
TGAGATTAGAGAATCAGAAA+GGG - chr8_4:19477265-19477284 None:intergenic 30.0%
!! AGGTTTTATGGGAAAATTGA+AGG + chr8_4:19477630-19477649 Msa1317900:intron 30.0%
AATAAAAAACCAACCACTTC+AGG - chr8_4:19477783-19477802 None:intergenic 30.0%
!!! CTGGATTTTTGATTTGGAAA+TGG + chr8_4:19477933-19477952 Msa1317900:intron 30.0%
ATGGAAATTAGCATGTACAA+AGG + chr8_4:19477952-19477971 Msa1317900:intron 30.0%
TGGAAATTAGCATGTACAAA+GGG + chr8_4:19477953-19477972 Msa1317900:intron 30.0%
CATAGCTTCTAGATCTATTA+AGG - chr8_4:19478163-19478182 None:intergenic 30.0%
TAGCTGTGTGTTAAATCTAA+CGG - chr8_4:19478215-19478234 None:intergenic 30.0%
!! TAAAACTATGTTTTTGCGGT+TGG + chr8_4:19478500-19478519 Msa1317900:intron 30.0%
!! AAAACTATGTTTTTGCGGTT+GGG + chr8_4:19478501-19478520 Msa1317900:intron 30.0%
! CATTGTTGATTGTTGTACAT+AGG - chr8_4:19478694-19478713 None:intergenic 30.0%
CAACAATCAACAATGTCTTT+CGG + chr8_4:19478699-19478718 Msa1317900:intron 30.0%
AGAAATAAGTTCATTGCGTA+CGG + chr8_4:19478906-19478925 Msa1317900:intron 30.0%
TAGCTCAAGATCAGTTATAA+GGG - chr8_4:19479293-19479312 None:intergenic 30.0%
TGCTACATTTCTCAATTCTA+GGG - chr8_4:19479537-19479556 None:intergenic 30.0%
! TTGGCAGAATTTTTAACCTT+AGG - chr8_4:19479595-19479614 None:intergenic 30.0%
AAGGTTAAAAATTCTGCCAA+AGG + chr8_4:19479595-19479614 Msa1317900:CDS 30.0%
TAAAAATTCTGCCAAAGGTA+AGG + chr8_4:19479600-19479619 Msa1317900:CDS 30.0%
CTTACAGAATCTTGTAAATG+AGG + chr8_4:19479765-19479784 Msa1317900:CDS 30.0%
!! ATTTTCTGTATTGATCGAGT+TGG + chr8_4:19479816-19479835 Msa1317900:CDS 30.0%
ATTATCAGTAAACTACTTGC+TGG - chr8_4:19480104-19480123 None:intergenic 30.0%
TGTTATATTTAAGGGTAGCA+TGG + chr8_4:19480204-19480223 Msa1317900:three_prime_UTR 30.0%
GTTATATTTAAGGGTAGCAT+GGG + chr8_4:19480205-19480224 Msa1317900:three_prime_UTR 30.0%
!!! TAGGTTTTCTGGTTATAGTA+TGG + chr8_4:19480231-19480250 Msa1317900:three_prime_UTR 30.0%
CTTAAATGTATATGTGTGAG+TGG + chr8_4:19480259-19480278 Msa1317900:three_prime_UTR 30.0%
TAAATGTATATGTGTGAGTG+GGG + chr8_4:19480261-19480280 Msa1317900:three_prime_UTR 30.0%
!!! TTTGAAGGGTTTTTGGGTTA+CGG - chr8_4:19477117-19477136 None:intergenic 35.0%
! ATAAAGTAACGGGGTTTGAA+GGG - chr8_4:19477131-19477150 None:intergenic 35.0%
TAGAGAATCAGAAAGGGAAA+AGG - chr8_4:19477259-19477278 None:intergenic 35.0%
CTGAGATTAGAGAATCAGAA+AGG - chr8_4:19477266-19477285 None:intergenic 35.0%
CTTTCTGATTCTCTAATCTC+AGG + chr8_4:19477264-19477283 Msa1317900:five_prime_UTR 35.0%
ATTATTCGACGATCTAACTG+TGG + chr8_4:19477416-19477435 Msa1317900:intron 35.0%
! TGTGGTTGATCAGATTTTGA+TGG + chr8_4:19477434-19477453 Msa1317900:intron 35.0%
ATGGGAAAATTGAAGGTCAA+CGG + chr8_4:19477637-19477656 Msa1317900:intron 35.0%
!! TCAAGGTAGATTTTGGTCTA+TGG + chr8_4:19477755-19477774 Msa1317900:intron 35.0%
GAAACAAACTTCGGAGATTA+TGG + chr8_4:19477867-19477886 Msa1317900:intron 35.0%
GGAAATTAGCATGTACAAAG+GGG + chr8_4:19477954-19477973 Msa1317900:intron 35.0%
CAGAGATGTGTTGGAATTTA+TGG - chr8_4:19478043-19478062 None:intergenic 35.0%
ATTCATGGTTTCGGTTAACT+CGG + chr8_4:19478066-19478085 Msa1317900:intron 35.0%
! TAACTCGGATGACGTTTTTA+CGG + chr8_4:19478081-19478100 Msa1317900:intron 35.0%
GTCAAATATGCCATTACTTG+CGG + chr8_4:19478133-19478152 Msa1317900:intron 35.0%
CGATTTGTGATTCATGCAAT+GGG - chr8_4:19478187-19478206 None:intergenic 35.0%
ACGATTTGTGATTCATGCAA+TGG - chr8_4:19478188-19478207 None:intergenic 35.0%
TTGCATGAATCACAAATCGT+TGG + chr8_4:19478188-19478207 Msa1317900:intron 35.0%
TACACACCACCATTCTTATA+AGG + chr8_4:19478233-19478252 Msa1317900:intron 35.0%
ACACACCACCATTCTTATAA+GGG + chr8_4:19478234-19478253 Msa1317900:intron 35.0%
TCTCTCTTCCCTTATAAGAA+TGG - chr8_4:19478245-19478264 None:intergenic 35.0%
AGAGCAACAATGGTGTTTAT+GGG + chr8_4:19478304-19478323 Msa1317900:intron 35.0%
AACAATGGTGTTTATGGGTT+TGG + chr8_4:19478309-19478328 Msa1317900:intron 35.0%
!! CAAACGATATCGTTTTGGTA+GGG + chr8_4:19478472-19478491 Msa1317900:intron 35.0%
ATGTATATGCTCTAGTGAAC+TGG + chr8_4:19478725-19478744 Msa1317900:intron 35.0%
GAAATAAGTTCATTGCGTAC+GGG + chr8_4:19478907-19478926 Msa1317900:intron 35.0%
!!! TGGTTTGTGTTGTTTTGTCA+TGG + chr8_4:19478943-19478962 Msa1317900:intron 35.0%
ACTGCATCAGCAAAATTAGA+TGG - chr8_4:19479021-19479040 None:intergenic 35.0%
TTATGTGACTTTGTCCGAAA+AGG - chr8_4:19479100-19479119 None:intergenic 35.0%
TTTCGGACAAAGTCACATAA+AGG + chr8_4:19479100-19479119 Msa1317900:CDS 35.0%
GTAGCTCAAGATCAGTTATA+AGG - chr8_4:19479294-19479313 None:intergenic 35.0%
TAGGGTTCTTAGCATTAATG+TGG - chr8_4:19479519-19479538 None:intergenic 35.0%
GTGCTACATTTCTCAATTCT+AGG - chr8_4:19479538-19479557 None:intergenic 35.0%
AAATGTAGCACCATTCTAGA+TGG + chr8_4:19479547-19479566 Msa1317900:CDS 35.0%
TTGCATCAAAACCTTACCTT+TGG - chr8_4:19479614-19479633 None:intergenic 35.0%
!! GTTTTGATGCAAGCTATGTA+TGG + chr8_4:19479622-19479641 Msa1317900:CDS 35.0%
TTCAAAGAAGTTGCTAGACT+TGG + chr8_4:19479702-19479721 Msa1317900:CDS 35.0%
! TTCTGTAAGCCTTTAAAAGC+AGG - chr8_4:19479754-19479773 None:intergenic 35.0%
GAAATTAGAGTTAGGTTCTC+CGG + chr8_4:19479787-19479806 Msa1317900:CDS 35.0%
CAATACAGAAAATTTCCCAC+CGG - chr8_4:19479809-19479828 None:intergenic 35.0%
TTCTTGCTCAACTTTGTCTT+CGG - chr8_4:19479899-19479918 None:intergenic 35.0%
ATCACATTTGAAGACTGTTG+AGG + chr8_4:19479918-19479937 Msa1317900:CDS 35.0%
TTGAAGACTGTTGAGGAATT+AGG + chr8_4:19479925-19479944 Msa1317900:CDS 35.0%
!!! TTGAAGGGTTTTTGGGTTAC+GGG - chr8_4:19477116-19477135 None:intergenic 40.0%
! GATAAAGTAACGGGGTTTGA+AGG - chr8_4:19477132-19477151 None:intergenic 40.0%
AATTAGCATGTACAAAGGGG+TGG + chr8_4:19477957-19477976 Msa1317900:intron 40.0%
TCCATCGGATTGAGGATTTA+CGG - chr8_4:19478011-19478030 None:intergenic 40.0%
TGTTGGAATTTATGGACCGT+CGG - chr8_4:19478035-19478054 None:intergenic 40.0%
ATGAATGGACAGAGATGTGT+TGG - chr8_4:19478052-19478071 None:intergenic 40.0%
AACACATCTCTGTCCATTCA+TGG + chr8_4:19478051-19478070 Msa1317900:intron 40.0%
TCTCTGTCCATTCATGGTTT+CGG + chr8_4:19478057-19478076 Msa1317900:intron 40.0%
GAGTTAACCGAAACCATGAA+TGG - chr8_4:19478067-19478086 None:intergenic 40.0%
! AACTCGGATGACGTTTTTAC+GGG + chr8_4:19478082-19478101 Msa1317900:intron 40.0%
! GATGACGTTTTTACGGGTTT+CGG + chr8_4:19478088-19478107 Msa1317900:intron 40.0%
! ATGACGTTTTTACGGGTTTC+GGG + chr8_4:19478089-19478108 Msa1317900:intron 40.0%
GCTTCTAGATCTATTAAGGG+TGG - chr8_4:19478159-19478178 None:intergenic 40.0%
CTCTTCCCTTATAAGAATGG+TGG - chr8_4:19478242-19478261 None:intergenic 40.0%
GAAGAGATTGAGAGCAACAA+TGG + chr8_4:19478294-19478313 Msa1317900:intron 40.0%
GAGAGCAACAATGGTGTTTA+TGG + chr8_4:19478303-19478322 Msa1317900:intron 40.0%
! GGTGTTTATGGGTTTGGAAT+AGG + chr8_4:19478315-19478334 Msa1317900:intron 40.0%
CGATATCGTTTGGCAGAATA+GGG - chr8_4:19478464-19478483 None:intergenic 40.0%
ACGATATCGTTTGGCAGAAT+AGG - chr8_4:19478465-19478484 None:intergenic 40.0%
! TCTGCCAAACGATATCGTTT+TGG + chr8_4:19478467-19478486 Msa1317900:intron 40.0%
CCTACCAAAACGATATCGTT+TGG - chr8_4:19478474-19478493 None:intergenic 40.0%
!! CCAAACGATATCGTTTTGGT+AGG + chr8_4:19478471-19478490 Msa1317900:intron 40.0%
AGTTTGGAAGAGTTTATCGC+AGG - chr8_4:19478566-19478585 None:intergenic 40.0%
! ACGGGTTACACAATTCAGTT+TGG - chr8_4:19478582-19478601 None:intergenic 40.0%
!! ATATTCGGGTTTCTGGTCAA+CGG - chr8_4:19478601-19478620 None:intergenic 40.0%
TTGATTGTTGTACATAGGGC+TGG - chr8_4:19478689-19478708 None:intergenic 40.0%
AAGGGAAGAAAGAACGGTTT+GGG - chr8_4:19479069-19479088 None:intergenic 40.0%
AAAGGGAAGAAAGAACGGTT+TGG - chr8_4:19479070-19479089 None:intergenic 40.0%
! AACCGTTCTTTCTTCCCTTT+TGG + chr8_4:19479070-19479089 Msa1317900:CDS 40.0%
! ACCGTTCTTTCTTCCCTTTT+GGG + chr8_4:19479071-19479090 Msa1317900:CDS 40.0%
TCCCAAAAGGGAAGAAAGAA+CGG - chr8_4:19479075-19479094 None:intergenic 40.0%
!! TCCCTTTTGGGAATCCTTTT+CGG + chr8_4:19479083-19479102 Msa1317900:CDS 40.0%
TCCGAAAAGGATTCCCAAAA+GGG - chr8_4:19479087-19479106 None:intergenic 40.0%
TAGTACTGCAAGTAACTGTG+GGG - chr8_4:19479140-19479159 None:intergenic 40.0%
GTAGTACTGCAAGTAACTGT+GGG - chr8_4:19479141-19479160 None:intergenic 40.0%
TGTAGTACTGCAAGTAACTG+TGG - chr8_4:19479142-19479161 None:intergenic 40.0%
CAGTTACTTGCAGTACTACA+TGG + chr8_4:19479142-19479161 Msa1317900:CDS 40.0%
AGGATTTCATCCTTGCTTTC+AGG - chr8_4:19479208-19479227 None:intergenic 40.0%
ATGAAATCCTCAGCTTGTCT+TGG + chr8_4:19479218-19479237 Msa1317900:CDS 40.0%
TTTGTCATCCCAAACACTCA+CGG - chr8_4:19479317-19479336 None:intergenic 40.0%
! TGAGTGTTTGGGATGACAAA+TGG + chr8_4:19479317-19479336 Msa1317900:CDS 40.0%
! GAGTGTTTGGGATGACAAAT+GGG + chr8_4:19479318-19479337 Msa1317900:CDS 40.0%
AAGTGTGCCTTGCACAATTT+AGG + chr8_4:19479436-19479455 Msa1317900:CDS 40.0%
CCTCATCAAAGTCGTTTCTT+CGG + chr8_4:19479464-19479483 Msa1317900:CDS 40.0%
CTCATCAAAGTCGTTTCTTC+GGG + chr8_4:19479465-19479484 Msa1317900:CDS 40.0%
CATGTTCTTTACTCGATGAC+TGG + chr8_4:19479488-19479507 Msa1317900:CDS 40.0%
!! ACCATTCTAGATGGTCTTGT+AGG + chr8_4:19479556-19479575 Msa1317900:CDS 40.0%
TCCTACAAGACCATCTAGAA+TGG - chr8_4:19479560-19479579 None:intergenic 40.0%
AGGATCACTTGATCTTCCTA+AGG + chr8_4:19479576-19479595 Msa1317900:CDS 40.0%
GAGTTATATCCCACTATCCA+AGG + chr8_4:19479862-19479881 Msa1317900:CDS 40.0%
TTATATCCCACTATCCAAGG+TGG + chr8_4:19479865-19479884 Msa1317900:CDS 40.0%
TTTACACCACCTTGGATAGT+GGG - chr8_4:19479874-19479893 None:intergenic 40.0%
ATTTACACCACCTTGGATAG+TGG - chr8_4:19479875-19479894 None:intergenic 40.0%
ACTGTAAATGATCGTGTCGT+TGG + chr8_4:19480066-19480085 Msa1317900:CDS 40.0%
! CTACTTGCTGGTCTATGTTT+CGG - chr8_4:19480092-19480111 None:intergenic 40.0%
TCTGGTAGTTGTTAATGTGC+TGG + chr8_4:19480137-19480156 Msa1317900:three_prime_UTR 40.0%
CTGGTAGTTGTTAATGTGCT+GGG + chr8_4:19480138-19480157 Msa1317900:three_prime_UTR 40.0%
TGGTAGTTGTTAATGTGCTG+GGG + chr8_4:19480139-19480158 Msa1317900:three_prime_UTR 40.0%
ATATTTAAGGGTAGCATGGG+TGG + chr8_4:19480208-19480227 Msa1317900:three_prime_UTR 40.0%
! ACGGGGTTTGAAGGGTTTTT+GGG - chr8_4:19477123-19477142 None:intergenic 45.0%
! AACGGGGTTTGAAGGGTTTT+TGG - chr8_4:19477124-19477143 None:intergenic 45.0%
TTGGTCTATGGTTCCTGAAG+TGG + chr8_4:19477767-19477786 Msa1317900:intron 45.0%
TCTATGGTTCCTGAAGTGGT+TGG + chr8_4:19477771-19477790 Msa1317900:intron 45.0%
!! TATGTTTTTGCGGTTGGGTG+TGG + chr8_4:19478506-19478525 Msa1317900:intron 45.0%
!! ATGTTTTTGCGGTTGGGTGT+GGG + chr8_4:19478507-19478526 Msa1317900:intron 45.0%
TTGGAAGAGTTTATCGCAGG+CGG - chr8_4:19478563-19478582 None:intergenic 45.0%
!! TATTCGGGTTTCTGGTCAAC+GGG - chr8_4:19478600-19478619 None:intergenic 45.0%
CAAAATTCCAGCGGGTCTAT+CGG + chr8_4:19478638-19478657 Msa1317900:intron 45.0%
! CTATCGGATTCGGTTCGAAA+CGG + chr8_4:19478654-19478673 Msa1317900:intron 45.0%
GCTTCGAGCAGCTATGAATT+TGG + chr8_4:19478787-19478806 Msa1317900:intron 45.0%
TCATTGCGTACGGGTTTCAT+TGG + chr8_4:19478916-19478935 Msa1317900:intron 45.0%
GTACGGGTTTCATTGGAAAC+TGG + chr8_4:19478923-19478942 Msa1317900:intron 45.0%
! AAGAAAGAACGGTTTGGGTG+TGG - chr8_4:19479064-19479083 None:intergenic 45.0%
GTCCGAAAAGGATTCCCAAA+AGG - chr8_4:19479088-19479107 None:intergenic 45.0%
CGGACAAAGTCACATAAAGG+CGG + chr8_4:19479103-19479122 Msa1317900:CDS 45.0%
TGCAGTACTACATGGTTTCG+AGG + chr8_4:19479150-19479169 Msa1317900:CDS 45.0%
CTACATTAGCAGAGAGGCTA+AGG + chr8_4:19479173-19479192 Msa1317900:CDS 45.0%
GAAGCTTATGCCTGAAAGCA+AGG + chr8_4:19479195-19479214 Msa1317900:CDS 45.0%
AAGTCATCCAAGACAAGCTG+AGG - chr8_4:19479228-19479247 None:intergenic 45.0%
CAGCTTGTCTTGGATGACTT+CGG + chr8_4:19479228-19479247 Msa1317900:CDS 45.0%
TTGTCATCCCAAACACTCAC+GGG - chr8_4:19479316-19479335 None:intergenic 45.0%
GAGCTTTCTCGTCTGAATCA+AGG + chr8_4:19479400-19479419 Msa1317900:CDS 45.0%
TTGTGCAAGGCACACTTAAG+CGG - chr8_4:19479433-19479452 None:intergenic 45.0%
GAAACGACTTTGATGAGGCT+GGG - chr8_4:19479462-19479481 None:intergenic 45.0%
AGAAACGACTTTGATGAGGC+TGG - chr8_4:19479463-19479482 None:intergenic 45.0%
CCGAAGAAACGACTTTGATG+AGG - chr8_4:19479467-19479486 None:intergenic 45.0%
GTTCTTTACTCGATGACTGG+AGG + chr8_4:19479491-19479510 Msa1317900:CDS 45.0%
GCAAGCTATGTATGGAGTCA+AGG + chr8_4:19479630-19479649 Msa1317900:CDS 45.0%
AGCTATGTATGGAGTCAAGG+TGG + chr8_4:19479633-19479652 Msa1317900:CDS 45.0%
! GTGTTTTCTGCAGCATTCTC+TGG + chr8_4:19479676-19479695 Msa1317900:CDS 45.0%
ATGTGCCTGACATGCATTCA+TGG + chr8_4:19479725-19479744 Msa1317900:CDS 45.0%
TGTGCCTGACATGCATTCAT+GGG + chr8_4:19479726-19479745 Msa1317900:CDS 45.0%
ATTAGAGTTAGGTTCTCCGG+TGG + chr8_4:19479790-19479809 Msa1317900:CDS 45.0%
TTAGAGTTAGGTTCTCCGGT+GGG + chr8_4:19479791-19479810 Msa1317900:CDS 45.0%
CTTCGGTATTTACACCACCT+TGG - chr8_4:19479882-19479901 None:intergenic 45.0%
AGAGAAGCTTTCCCAAGGAA+TGG + chr8_4:19479957-19479976 Msa1317900:CDS 45.0%
TGCAAGGAGATCCATTCCTT+GGG - chr8_4:19479971-19479990 None:intergenic 45.0%
TTGCAAGGAGATCCATTCCT+TGG - chr8_4:19479972-19479991 None:intergenic 45.0%
AGGAATGGATCTCCTTGCAA+AGG + chr8_4:19479972-19479991 Msa1317900:CDS 45.0%
GGAATGGATCTCCTTGCAAA+GGG + chr8_4:19479973-19479992 Msa1317900:CDS 45.0%
! CACGACTAGTCAAAACTGCT+TGG - chr8_4:19480014-19480033 None:intergenic 45.0%
! ACACTTTGCTATCGTCTCTG+AGG + chr8_4:19480034-19480053 Msa1317900:CDS 45.0%
!! TTGCTATCGTCTCTGAGGTT+TGG + chr8_4:19480039-19480058 Msa1317900:CDS 45.0%
GGTAGTTGTTAATGTGCTGG+GGG + chr8_4:19480140-19480159 Msa1317900:three_prime_UTR 45.0%
GTAGTTGTTAATGTGCTGGG+GGG + chr8_4:19480141-19480160 Msa1317900:three_prime_UTR 45.0%
!!! AAGGGTTTTTGGGTTACGGG+AGG - chr8_4:19477113-19477132 None:intergenic 50.0%
TGTACAAAGGGGTGGACAAC+CGG + chr8_4:19477965-19477984 Msa1317900:intron 50.0%
GCCGTAAATCCTCAATCCGA+TGG + chr8_4:19478007-19478026 Msa1317900:intron 50.0%
!! TTATGGACCGTCGGTTCCAT+CGG - chr8_4:19478026-19478045 None:intergenic 50.0%
TTAAGGGTGGCCGCAAGTAA+TGG - chr8_4:19478146-19478165 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr8_4:19478340-19478359 Msa1317900:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr8_4:19478339-19478358 Msa1317900:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+GGG + chr8_4:19478340-19478359 Msa1317900:intron 50.0%
! GCGGGTAATATTCGGGTTTC+TGG - chr8_4:19478608-19478627 None:intergenic 50.0%
GTACATAGGGCTGGACAAGA+AGG - chr8_4:19478680-19478699 None:intergenic 50.0%
GCAGTAAATGAGTCGTTCCC+AGG + chr8_4:19479036-19479055 Msa1317900:intron 50.0%
TCGAGGCTACATTAGCAGAG+AGG + chr8_4:19479167-19479186 Msa1317900:CDS 50.0%
TTGAGCTACCCGTGAGTGTT+TGG + chr8_4:19479305-19479324 Msa1317900:CDS 50.0%
TGAGCTACCCGTGAGTGTTT+GGG + chr8_4:19479306-19479325 Msa1317900:CDS 50.0%
!! TCATGGGCGCCTGCTTTTAA+AGG + chr8_4:19479742-19479761 Msa1317900:CDS 50.0%
AGCTGTTGACGCTGTTGTGA+AGG + chr8_4:19479840-19479859 Msa1317900:CDS 50.0%
GACTGTTGAGGAATTAGGCG+TGG + chr8_4:19479930-19479949 Msa1317900:CDS 50.0%
AACCATCCACTCCCTTTGCA+AGG - chr8_4:19479987-19480006 None:intergenic 50.0%
TTAAGGGTAGCATGGGTGGT+AGG + chr8_4:19480212-19480231 Msa1317900:three_prime_UTR 50.0%
! AGCATGGGTGGTAGGTTTTC+TGG + chr8_4:19480220-19480239 Msa1317900:three_prime_UTR 50.0%
CGAATCCACCAGCATCCAAC+CGG - chr8_4:19477987-19478006 None:intergenic 55.0%
!! CGGTTGGATGCTGGTGGATT+CGG + chr8_4:19477985-19478004 Msa1317900:intron 55.0%
CCTCAATCCGATGGAACCGA+CGG + chr8_4:19478016-19478035 Msa1317900:intron 55.0%
TTTACGGGTTTCGGGCGCAA+CGG + chr8_4:19478097-19478116 Msa1317900:intron 55.0%
GAGAGAGAGAGAGAGAGAGG+GGG + chr8_4:19478395-19478414 Msa1317900:intron 55.0%
! GCTGGAATTTTGCAGCACGC+GGG - chr8_4:19478630-19478649 None:intergenic 55.0%
! CGCTGGAATTTTGCAGCACG+CGG - chr8_4:19478631-19478650 None:intergenic 55.0%
CGCGTGCTGCAAAATTCCAG+CGG + chr8_4:19478629-19478648 Msa1317900:intron 55.0%
GCGTGCTGCAAAATTCCAGC+GGG + chr8_4:19478630-19478649 Msa1317900:intron 55.0%
TCCAGCGGGTCTATCGGATT+CGG + chr8_4:19478644-19478663 Msa1317900:intron 55.0%
! ACGGTTTGGGTGTGGATCCT+GGG - chr8_4:19479056-19479075 None:intergenic 55.0%
! AACGGTTTGGGTGTGGATCC+TGG - chr8_4:19479057-19479076 None:intergenic 55.0%
GGCTGGGCCTAAATTGTGCA+AGG - chr8_4:19479446-19479465 None:intergenic 55.0%
GCTGCAGAGAAGCTTTCCCA+AGG + chr8_4:19479952-19479971 Msa1317900:CDS 55.0%
GGATCTCCTTGCAAAGGGAG+TGG + chr8_4:19479978-19479997 Msa1317900:CDS 55.0%
CTCCTTGCAAAGGGAGTGGA+TGG + chr8_4:19479982-19480001 Msa1317900:CDS 55.0%
TGGGTTACGGGAGGACACGT+GGG - chr8_4:19477104-19477123 None:intergenic 60.0%
TTGGGTTACGGGAGGACACG+TGG - chr8_4:19477105-19477124 None:intergenic 60.0%
CAAAGGGGTGGACAACCGGT+TGG + chr8_4:19477969-19477988 Msa1317900:intron 60.0%
GTGGACAACCGGTTGGATGC+TGG + chr8_4:19477976-19477995 Msa1317900:intron 60.0%
GACAACCGGTTGGATGCTGG+TGG + chr8_4:19477979-19477998 Msa1317900:intron 60.0%
!! CCGTCGGTTCCATCGGATTG+AGG - chr8_4:19478019-19478038 None:intergenic 60.0%
TTACGGGTTTCGGGCGCAAC+GGG + chr8_4:19478098-19478117 Msa1317900:intron 60.0%
GCGCAACGGGTGTGTTACGA+CGG + chr8_4:19478111-19478130 Msa1317900:intron 60.0%
AGAGAGAGAGAGAGGGGGAG+AGG + chr8_4:19478400-19478419 Msa1317900:intron 60.0%
GAGAGAGAGAGAGGGGGAGA+GGG + chr8_4:19478401-19478420 Msa1317900:intron 60.0%
GGAGAGGGAGAGGGAGAGAT+GGG + chr8_4:19478422-19478441 Msa1317900:intron 60.0%
! CGGTTGGGTGTGGGTTACGT+TGG + chr8_4:19478516-19478535 Msa1317900:intron 60.0%
CACGCGGGCGGGTAATATTC+GGG - chr8_4:19478615-19478634 None:intergenic 60.0%
GCACGCGGGCGGGTAATATT+CGG - chr8_4:19478616-19478635 None:intergenic 60.0%
! GAATTTTGCAGCACGCGGGC+GGG - chr8_4:19478626-19478645 None:intergenic 60.0%
! GGAATTTTGCAGCACGCGGG+CGG - chr8_4:19478627-19478646 None:intergenic 60.0%
ACCGAATCCGATAGACCCGC+TGG - chr8_4:19478648-19478667 None:intergenic 60.0%
GGCGCCCATGAATGCATGTC+AGG - chr8_4:19479733-19479752 None:intergenic 60.0%
GGTTACGGGAGGACACGTGG+GGG - chr8_4:19477102-19477121 None:intergenic 65.0%
GGGTTACGGGAGGACACGTG+GGG - chr8_4:19477103-19477122 None:intergenic 65.0%
AGAGAGAGGGGGAGAGGGAG+AGG + chr8_4:19478406-19478425 Msa1317900:intron 65.0%
GAGAGAGGGGGAGAGGGAGA+GGG + chr8_4:19478407-19478426 Msa1317900:intron 65.0%
GGGAGAGGGAGAGGGAGAGA+TGG + chr8_4:19478421-19478440 Msa1317900:intron 65.0%
AGGGGGAGAGGGAGAGGGAG+AGG + chr8_4:19478412-19478431 Msa1317900:intron 70.0%
GGGGGAGAGGGAGAGGGAGA+GGG + chr8_4:19478413-19478432 Msa1317900:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 19477090 19480359 19477090 ID=Msa1317900;Name=Msa1317900
chr8_4 mRNA 19477090 19480359 19477090 ID=Msa1317900-mRNA-1;Parent=Msa1317900;Name=Msa1317900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=196|0|0.5|1|0|0.5|2|240|358
chr8_4 exon 19477090 19477285 19477090 ID=Msa1317900-mRNA-1:exon:7131;Parent=Msa1317900-mRNA-1
chr8_4 exon 19479043 19480359 19479043 ID=Msa1317900-mRNA-1:exon:7132;Parent=Msa1317900-mRNA-1
chr8_4 five_prime_UTR 19477090 19477285 19477090 ID=Msa1317900-mRNA-1:five_prime_utr;Parent=Msa1317900-mRNA-1
chr8_4 CDS 19479043 19480119 19479043 ID=Msa1317900-mRNA-1:cds;Parent=Msa1317900-mRNA-1
chr8_4 three_prime_UTR 19480120 19480359 19480120 ID=Msa1317900-mRNA-1:three_prime_utr;Parent=Msa1317900-mRNA-1
Gene Sequence

>Msa1317900

ATGAGTCGTTCCCAGGATCCACACCCAAACCGTTCTTTCTTCCCTTTTGGGAATCCTTTTCGGACAAAGTCACATAAAGGCGGCTCTCACATGTCCCCACAGTTACTTGCAGTACTACATGGTTTCGAGGCTACATTAGCAGAGAGGCTAAGGAAGCTTATGCCTGAAAGCAAGGATGAAATCCTCAGCTTGTCTTGGATGACTTCGGCTATGAAGTCACTTTGTGAAACTCACAATGACATACGAACCCTTATAACTGATCTTGAGCTACCCGTGAGTGTTTGGGATGACAAATGGGTTGATGTCTACTTTGACATAAGCACAAAGTTGCTAGACATTTGCAACATATTTAGTTCTGAGCTTTCTCGTCTGAATCAAGGCAATCTTCCGCTTAAGTGTGCCTTGCACAATTTAGGCCCAGCCTCATCAAAGTCGTTTCTTCGGGCATGTTCTTTACTCGATGACTGGAGGCGCCACATTAATGCTAAGAACCCTAGAATTGAGAAATGTAGCACCATTCTAGATGGTCTTGTAGGATCACTTGATCTTCCTAAGGTTAAAAATTCTGCCAAAGGTAAGGTTTTGATGCAAGCTATGTATGGAGTCAAGGTGGAGACTGTATTTGTTTGCAGTGTGTTTTCTGCAGCATTCTCTGGCTCTTCAAAGAAGTTGCTAGACTTGGATGTGCCTGACATGCATTCATGGGCGCCTGCTTTTAAAGGCTTACAGAATCTTGTAAATGAGGAAATTAGAGTTAGGTTCTCCGGTGGGAAATTTTCTGTATTGATCGAGTTGGAAGCTGTTGACGCTGTTGTGAAGGAGTTATATCCCACTATCCAAGGTGGTGTAAATACCGAAGACAAAGTTGAGCAAGAATCACATTTGAAGACTGTTGAGGAATTAGGCGTGGCTGCAGAGAAGCTTTCCCAAGGAATGGATCTCCTTGCAAAGGGAGTGGATGGTTTCTTCCAAGCAGTTTTGACTAGTCGTGACACTTTGCTATCGTCTCTGAGGTTTGGCAAAACTGTAAATGATCGTGTCGTTGGCCGAAACATAGACCAGCAAGTAGTTTACTGA
Protein sequence

>Msa1317900

MSRSQDPHPNRSFFPFGNPFRTKSHKGGSHMSPQLLAVLHGFEATLAERLRKLMPESKDEILSLSWMTSAMKSLCETHNDIRTLITDLELPVSVWDDKWVDVYFDISTKLLDICNIFSSELSRLNQGNLPLKCALHNLGPASSKSFLRACSLLDDWRRHINAKNPRIEKCSTILDGLVGSLDLPKVKNSAKGKVLMQAMYGVKVETVFVCSVFSAAFSGSSKKLLDLDVPDMHSWAPAFKGLQNLVNEEIRVRFSGGKFSVLIELEAVDAVVKELYPTIQGGVNTEDKVEQESHLKTVEELGVAAEKLSQGMDLLAKGVDGFFQAVLTSRDTLLSSLRFGKTVNDRVVGRNIDQQVVY*