Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319000 | sp|A4ZDG8|BSMT3_PETHY | 55.924 | 211 | 89 | 1 | 11 | 217 | 1 | 211 | 2.23e-80 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319000 | G7L6V4 | 95.261 | 211 | 6 | 1 | 11 | 217 | 1 | 211 | 3.76e-145 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1234170 | Msa1319000 | 0.802976 | 4.343851e-49 | -8.615850e-47 |
| Msa1314730 | Msa1319000 | 0.815298 | 9.933797e-52 | -8.615850e-47 |
| Msa1174350 | Msa1319000 | 0.858083 | 1.050413e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319000 | MtrunA17_Chr8g0343971 | 95.261 | 211 | 6 | 1 | 11 | 217 | 1 | 211 | 7.24e-149 | 418 |
| Msa1319000 | MtrunA17_Chr8g0343981 | 76.777 | 211 | 45 | 1 | 11 | 217 | 1 | 211 | 8.22e-117 | 337 |
| Msa1319000 | MtrunA17_Chr4g0008111 | 68.246 | 211 | 63 | 1 | 11 | 217 | 1 | 211 | 1.86e-103 | 303 |
| Msa1319000 | MtrunA17_Chr8g0372671 | 69.194 | 211 | 61 | 1 | 11 | 217 | 1 | 211 | 2.23e-103 | 303 |
| Msa1319000 | MtrunA17_Chr8g0372821 | 68.720 | 211 | 62 | 1 | 11 | 217 | 1 | 211 | 7.43e-103 | 301 |
| Msa1319000 | MtrunA17_Chr6g0475221 | 69.194 | 211 | 57 | 2 | 11 | 217 | 1 | 207 | 1.13e-102 | 300 |
| Msa1319000 | MtrunA17_Chr3g0107591 | 68.246 | 211 | 62 | 2 | 11 | 217 | 1 | 210 | 3.65e-102 | 300 |
| Msa1319000 | MtrunA17_Chr6g0475241 | 67.453 | 212 | 64 | 2 | 11 | 217 | 1 | 212 | 1.68e-99 | 293 |
| Msa1319000 | MtrunA17_Chr5g0404631 | 59.459 | 222 | 85 | 2 | 1 | 217 | 1 | 222 | 2.70e-98 | 290 |
| Msa1319000 | MtrunA17_Chr3g0144871 | 49.309 | 217 | 100 | 2 | 11 | 217 | 1 | 217 | 1.86e-72 | 224 |
| Msa1319000 | MtrunA17_Chr5g0419851 | 46.637 | 223 | 109 | 3 | 5 | 217 | 55 | 277 | 1.06e-63 | 203 |
| Msa1319000 | MtrunA17_Chr8g0372801 | 68.852 | 122 | 34 | 1 | 100 | 217 | 31 | 152 | 1.14e-59 | 185 |
| Msa1319000 | MtrunA17_Chr7g0252361 | 38.967 | 213 | 120 | 3 | 15 | 217 | 3 | 215 | 2.93e-44 | 151 |
| Msa1319000 | MtrunA17_Chr3g0107871 | 41.451 | 193 | 103 | 3 | 35 | 217 | 2 | 194 | 2.94e-43 | 148 |
| Msa1319000 | MtrunA17_Chr3g0100101 | 38.938 | 226 | 117 | 7 | 9 | 217 | 8 | 229 | 4.05e-43 | 149 |
| Msa1319000 | MtrunA17_Chr5g0444921 | 36.797 | 231 | 121 | 7 | 9 | 217 | 11 | 238 | 9.45e-40 | 140 |
| Msa1319000 | MtrunA17_Chr1g0208641 | 41.667 | 192 | 90 | 5 | 38 | 217 | 39 | 220 | 8.89e-36 | 129 |
| Msa1319000 | MtrunA17_Chr3g0099281 | 38.728 | 173 | 90 | 5 | 9 | 167 | 11 | 181 | 7.33e-31 | 112 |
| Msa1319000 | MtrunA17_Chr1g0155461 | 41.358 | 162 | 81 | 4 | 11 | 158 | 1 | 162 | 2.25e-30 | 110 |
| Msa1319000 | MtrunA17_Chr1g0155491 | 44.444 | 171 | 81 | 4 | 11 | 167 | 1 | 171 | 7.61e-30 | 109 |
| Msa1319000 | MtrunA17_Chr6g0455071 | 54.321 | 81 | 31 | 1 | 143 | 217 | 11 | 91 | 1.05e-27 | 102 |
| Msa1319000 | MtrunA17_Chr7g0252341 | 38.583 | 127 | 74 | 3 | 45 | 167 | 6 | 132 | 1.65e-20 | 84.3 |
| Msa1319000 | MtrunA17_Chr1g0155451 | 49.123 | 57 | 23 | 1 | 167 | 217 | 9 | 65 | 5.80e-11 | 60.1 |
| Msa1319000 | MtrunA17_Chr1g0155481 | 45.161 | 62 | 28 | 1 | 162 | 217 | 4 | 65 | 8.14e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319000 | AT5G04370.1 | 48.756 | 201 | 100 | 3 | 19 | 217 | 41 | 240 | 2.27e-59 | 191 |
| Msa1319000 | AT5G04370.2 | 48.756 | 201 | 100 | 3 | 19 | 217 | 60 | 259 | 5.13e-59 | 191 |
| Msa1319000 | AT5G04370.3 | 48.756 | 201 | 100 | 3 | 19 | 217 | 46 | 245 | 5.51e-59 | 191 |
| Msa1319000 | AT5G66430.1 | 45.500 | 200 | 107 | 2 | 19 | 217 | 1 | 199 | 1.51e-57 | 186 |
| Msa1319000 | AT3G11480.1 | 44.390 | 205 | 112 | 2 | 15 | 217 | 27 | 231 | 1.55e-57 | 186 |
| Msa1319000 | AT4G36470.1 | 46.222 | 225 | 100 | 5 | 10 | 217 | 3 | 223 | 1.61e-56 | 183 |
| Msa1319000 | AT5G04380.1 | 42.727 | 220 | 119 | 4 | 3 | 217 | 15 | 232 | 7.35e-56 | 182 |
| Msa1319000 | AT5G04380.3 | 42.727 | 220 | 119 | 4 | 3 | 217 | 19 | 236 | 7.82e-56 | 182 |
| Msa1319000 | AT5G38020.1 | 46.377 | 207 | 103 | 4 | 16 | 217 | 3 | 206 | 7.16e-55 | 179 |
| Msa1319000 | AT3G21950.1 | 43.961 | 207 | 108 | 3 | 16 | 217 | 3 | 206 | 2.68e-54 | 177 |
| Msa1319000 | AT3G21950.2 | 43.961 | 207 | 108 | 3 | 16 | 217 | 3 | 206 | 7.82e-54 | 177 |
| Msa1319000 | AT2G14060.2 | 40.553 | 217 | 121 | 3 | 6 | 217 | 1 | 214 | 2.13e-52 | 169 |
| Msa1319000 | AT2G14060.1 | 40.553 | 217 | 121 | 3 | 6 | 217 | 1 | 214 | 3.44e-51 | 170 |
| Msa1319000 | AT5G04380.2 | 46.875 | 160 | 84 | 1 | 58 | 217 | 7 | 165 | 4.20e-49 | 163 |
| Msa1319000 | AT5G38020.2 | 50.000 | 164 | 75 | 3 | 58 | 217 | 7 | 167 | 1.02e-47 | 159 |
| Msa1319000 | AT1G19640.1 | 44.105 | 229 | 106 | 4 | 11 | 217 | 1 | 229 | 6.84e-46 | 156 |
| Msa1319000 | AT5G55250.1 | 36.486 | 222 | 125 | 5 | 11 | 217 | 13 | 233 | 3.26e-42 | 147 |
| Msa1319000 | AT1G68040.1 | 40.000 | 210 | 106 | 5 | 19 | 217 | 13 | 213 | 8.55e-40 | 140 |
| Msa1319000 | AT4G26420.3 | 37.900 | 219 | 120 | 6 | 8 | 215 | 2 | 215 | 3.44e-38 | 133 |
| Msa1319000 | AT5G56300.1 | 39.908 | 218 | 102 | 9 | 15 | 215 | 20 | 225 | 1.10e-37 | 135 |
| Msa1319000 | AT4G26420.2 | 39.423 | 208 | 110 | 6 | 19 | 215 | 1 | 203 | 2.08e-37 | 131 |
| Msa1319000 | AT4G26420.1 | 37.900 | 219 | 120 | 6 | 8 | 215 | 2 | 215 | 5.57e-37 | 133 |
| Msa1319000 | AT5G38780.1 | 38.318 | 214 | 110 | 8 | 19 | 217 | 10 | 216 | 1.67e-35 | 129 |
| Msa1319000 | AT5G55250.2 | 37.696 | 191 | 99 | 6 | 44 | 217 | 8 | 195 | 3.15e-35 | 127 |
| Msa1319000 | AT5G37990.1 | 40.187 | 214 | 107 | 8 | 19 | 217 | 10 | 217 | 6.22e-34 | 124 |
| Msa1319000 | AT5G37970.1 | 41.553 | 219 | 97 | 9 | 19 | 217 | 10 | 217 | 9.46e-34 | 124 |
| Msa1319000 | AT3G44840.1 | 41.748 | 206 | 104 | 7 | 19 | 217 | 7 | 203 | 1.50e-33 | 123 |
| Msa1319000 | AT1G15125.2 | 35.885 | 209 | 115 | 7 | 19 | 217 | 1 | 200 | 2.71e-33 | 120 |
| Msa1319000 | AT5G38100.2 | 39.352 | 216 | 103 | 8 | 19 | 217 | 10 | 214 | 3.70e-33 | 120 |
| Msa1319000 | AT5G38100.4 | 39.352 | 216 | 103 | 8 | 19 | 217 | 10 | 214 | 3.92e-33 | 120 |
| Msa1319000 | AT1G15125.1 | 35.885 | 209 | 115 | 7 | 19 | 217 | 1 | 200 | 1.92e-32 | 120 |
| Msa1319000 | AT5G38100.1 | 39.352 | 216 | 103 | 8 | 19 | 217 | 10 | 214 | 2.83e-32 | 120 |
| Msa1319000 | AT1G66700.3 | 36.364 | 209 | 114 | 5 | 19 | 217 | 9 | 208 | 4.85e-32 | 117 |
| Msa1319000 | AT1G66700.1 | 36.364 | 209 | 114 | 5 | 19 | 217 | 9 | 208 | 1.14e-31 | 118 |
| Msa1319000 | AT5G38780.2 | 40.476 | 168 | 82 | 5 | 61 | 217 | 7 | 167 | 1.85e-31 | 117 |
| Msa1319000 | AT3G44860.1 | 39.303 | 201 | 106 | 6 | 19 | 212 | 7 | 198 | 2.07e-30 | 115 |
| Msa1319000 | AT5G38100.3 | 42.012 | 169 | 77 | 6 | 61 | 217 | 32 | 191 | 6.49e-30 | 113 |
| Msa1319000 | AT3G44870.1 | 37.500 | 200 | 108 | 6 | 19 | 212 | 7 | 195 | 1.18e-29 | 113 |
| Msa1319000 | AT1G66720.1 | 33.014 | 209 | 121 | 5 | 19 | 217 | 9 | 208 | 3.45e-26 | 103 |
| Msa1319000 | AT1G66690.1 | 33.168 | 202 | 116 | 5 | 19 | 210 | 9 | 201 | 1.69e-23 | 96.7 |
Find 46 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGCAATTGCAAGGCTTC+TGG | 0.218678 | 8_4:+21140951 | None:intergenic |
| TGCTACTTCTTTGGTGTTCC+CGG | 0.231997 | 8_4:-21140718 | Msa1319000:CDS |
| ATGGGTCCTTGCTACTTCTT+TGG | 0.270416 | 8_4:-21140727 | Msa1319000:CDS |
| CGAAGGTATAGATAACAATA+AGG | 0.328330 | 8_4:-21140478 | Msa1319000:CDS |
| TGATGAAATCAAAACTGAAA+TGG | 0.343051 | 8_4:-21140746 | Msa1319000:CDS |
| AAGCCTTGCAATTGCAGATC+TGG | 0.344973 | 8_4:-21140947 | Msa1319000:CDS |
| CTTATTGTTATCTATACCTT+CGG | 0.355792 | 8_4:+21140479 | None:intergenic |
| TCTGCAATTGCAAGGCTTCT+GGG | 0.377937 | 8_4:+21140952 | None:intergenic |
| CAAGTGTCGCGCAAAGGAAT+TGG | 0.382581 | 8_4:-21140370 | Msa1319000:CDS |
| AACTCTATCATAGAAAGAAC+CGG | 0.395889 | 8_4:+21140699 | None:intergenic |
| GAGATGCATATTTCAATTGT+TGG | 0.419986 | 8_4:+21140857 | None:intergenic |
| GATGAAATCAAAACTGAAAT+GGG | 0.433507 | 8_4:-21140745 | Msa1319000:CDS |
| TTTATGTCATTATAGGGAAA+GGG | 0.443756 | 8_4:-21141036 | Msa1319000:intron |
| CGCAAAGGAATTGGTTGAAG+GGG | 0.459467 | 8_4:-21140361 | Msa1319000:CDS |
| TTATTGTTATCTATACCTTC+GGG | 0.460263 | 8_4:+21140480 | None:intergenic |
| AAAGCTAAAAGAAGCAAGAA+TGG | 0.467084 | 8_4:-21144880 | Msa1319000:CDS |
| TAAGCCTTGACGACATTTGA+GGG | 0.478306 | 8_4:+21140429 | None:intergenic |
| GAAGGTATAGATAACAATAA+GGG | 0.479026 | 8_4:-21140477 | Msa1319000:CDS |
| CTCAGAAATCATCATGGTTG+TGG | 0.481895 | 8_4:-21140890 | Msa1319000:CDS |
| CGCGCAAAGGAATTGGTTGA+AGG | 0.488936 | 8_4:-21140363 | Msa1319000:CDS |
| ACGAAATGCAGACTTCGATC+TGG | 0.517231 | 8_4:+21140673 | None:intergenic |
| AGCCTTGCAATTGCAGATCT+GGG | 0.518124 | 8_4:-21140946 | Msa1319000:CDS |
| GCAGATCTGGGTTGTTCTTG+TGG | 0.519811 | 8_4:-21140934 | Msa1319000:CDS |
| GTAAGCCTTGACGACATTTG+AGG | 0.520325 | 8_4:+21140428 | None:intergenic |
| CAGTCTTCACTGGCTATCAA+AGG | 0.522423 | 8_4:-21140638 | Msa1319000:intron |
| GGGAAGATAGTGCACATGAA+TGG | 0.523726 | 8_4:-21144852 | Msa1319000:CDS |
| AAGGCTTCTGGGAAGTATGC+TGG | 0.539921 | 8_4:+21140963 | None:intergenic |
| GCTGGAGTAGAGGCTAGTTA+TGG | 0.545444 | 8_4:+21140981 | None:intergenic |
| TTATGTCATTATAGGGAAAG+GGG | 0.554192 | 8_4:-21141035 | Msa1319000:intron |
| ACTGCTCTTACAGTCTTCAC+TGG | 0.558182 | 8_4:-21140648 | Msa1319000:CDS |
| GCGCAAAGGAATTGGTTGAA+GGG | 0.574318 | 8_4:-21140362 | Msa1319000:CDS |
| AAAAGAAGCAAGAATGGACG+TGG | 0.582211 | 8_4:-21144874 | Msa1319000:CDS |
| GTGCACATGAATGGAGGCGA+TGG | 0.584332 | 8_4:-21144843 | Msa1319000:CDS |
| TGGGAAGTATGCTGGAGTAG+AGG | 0.601219 | 8_4:+21140971 | None:intergenic |
| AACCCAGATCTGCAATTGCA+AGG | 0.605454 | 8_4:+21140944 | None:intergenic |
| AGTGAAGACTGTAAGAGCAG+TGG | 0.607547 | 8_4:+21140650 | None:intergenic |
| TTGGTGAATTAGGTTCCCGA+AGG | 0.623427 | 8_4:-21140495 | Msa1319000:intron |
| GGAACACCAAAGAAGTAGCA+AGG | 0.627551 | 8_4:+21140721 | None:intergenic |
| AAGTCCCTCAAATGTCGTCA+AGG | 0.632935 | 8_4:-21140433 | Msa1319000:CDS |
| AAGATAGTGCACATGAATGG+AGG | 0.632944 | 8_4:-21144849 | Msa1319000:CDS |
| ATAACATGGCCGATAATGGT+AGG | 0.636564 | 8_4:-21145319 | None:intergenic |
| ACTCTATCATAGAAAGAACC+GGG | 0.650635 | 8_4:+21140700 | None:intergenic |
| TGTTGTCTCAGAAATCATCA+TGG | 0.661673 | 8_4:-21140896 | Msa1319000:CDS |
| GCAAAGGAATTGGTTGAAGG+GGG | 0.680145 | 8_4:-21140360 | Msa1319000:CDS |
| AAAGAAGCAAGAATGGACGT+GGG | 0.688725 | 8_4:-21144873 | Msa1319000:CDS |
| AAGAAGCAAGAATGGACGTG+GGG | 0.703619 | 8_4:-21144872 | Msa1319000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATAAATGTTAATTAAA+TGG | + | chr8_4:21140670-21140689 | None:intergenic | 10.0% |
| !! | AGATAAAAATAAAGAAAATA+TGG | + | chr8_4:21141267-21141286 | None:intergenic | 10.0% |
| !! | AATAAAAAAAAAATTGTATG+GGG | - | chr8_4:21141342-21141361 | Msa1319000:intron | 10.0% |
| !!! | TGTGATTTTTTTTTTTTATA+TGG | - | chr8_4:21141477-21141496 | Msa1319000:intron | 10.0% |
| !! | AAAGTAAATTTAAAAAGTTA+GGG | + | chr8_4:21142098-21142117 | None:intergenic | 10.0% |
| !! | AAAAGTAAATTTAAAAAGTT+AGG | + | chr8_4:21142099-21142118 | None:intergenic | 10.0% |
| !!! | CAAAAGTAATTTTTTTTTAA+AGG | + | chr8_4:21142127-21142146 | None:intergenic | 10.0% |
| !!! | TTTTAGATAAATTATGTATT+TGG | - | chr8_4:21142211-21142230 | Msa1319000:intron | 10.0% |
| !! | TAAATTATTTCATATCTATA+AGG | - | chr8_4:21142945-21142964 | Msa1319000:intron | 10.0% |
| !! | TAAAAAGAAAATATTTATCA+CGG | + | chr8_4:21144605-21144624 | None:intergenic | 10.0% |
| !! | ATATAAGTTTGAAAGTTTAT+AGG | + | chr8_4:21141103-21141122 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAAATTGTATGG+GGG | - | chr8_4:21141343-21141362 | Msa1319000:intron | 15.0% |
| !! | AAAAACCATTAAAAAATCTA+TGG | - | chr8_4:21141398-21141417 | Msa1319000:intron | 15.0% |
| !!! | CTTTTTAGTAAATCATATAT+CGG | + | chr8_4:21141577-21141596 | None:intergenic | 15.0% |
| !! | TAAAATTAAAACATAATGTG+AGG | + | chr8_4:21141812-21141831 | None:intergenic | 15.0% |
| !!! | TCTCAAATTACTTTATTTTT+TGG | - | chr8_4:21142043-21142062 | Msa1319000:intron | 15.0% |
| !!! | CTCAAATTACTTTATTTTTT+GGG | - | chr8_4:21142044-21142063 | Msa1319000:intron | 15.0% |
| !! | TCTCAAAAAAAAAAATTGAT+GGG | + | chr8_4:21142482-21142501 | None:intergenic | 15.0% |
| !!! | AAATCAATGATTTTAATTGA+TGG | + | chr8_4:21142514-21142533 | None:intergenic | 15.0% |
| !! | TTTATCCTTCAATAAAATAT+GGG | + | chr8_4:21142543-21142562 | None:intergenic | 15.0% |
| !! | ATTTATCCTTCAATAAAATA+TGG | + | chr8_4:21142544-21142563 | None:intergenic | 15.0% |
| !!! | TATTATACTTGTTTCTTTTA+GGG | + | chr8_4:21142791-21142810 | None:intergenic | 15.0% |
| !! | AAACAAGTATAATAGAAATT+TGG | - | chr8_4:21142797-21142816 | Msa1319000:intron | 15.0% |
| !!! | TTTTCTTTTTATGTCATTAT+AGG | - | chr8_4:21144614-21144633 | Msa1319000:intron | 15.0% |
| !!! | TTTCTTTTTATGTCATTATA+GGG | - | chr8_4:21144615-21144634 | Msa1319000:intron | 15.0% |
| !!! | CTAATTGATTTTTATTTGTT+TGG | - | chr8_4:21145143-21145162 | Msa1319000:intron | 15.0% |
| !! | AAAAATAAAAATAACAGGCA+TGG | - | chr8_4:21140389-21140408 | Msa1319000:CDS | 20.0% |
| !! | AGATAGATAGTAGATAAAAA+GGG | + | chr8_4:21140709-21140728 | None:intergenic | 20.0% |
| !! | TAGATAGATAGTAGATAAAA+AGG | + | chr8_4:21140710-21140729 | None:intergenic | 20.0% |
| !!! | TTTTATCTACTATCTATCTA+TGG | - | chr8_4:21140710-21140729 | Msa1319000:CDS | 20.0% |
| !! | TTTATCTACTATCTATCTAT+GGG | - | chr8_4:21140711-21140730 | Msa1319000:CDS | 20.0% |
| !! | CTGATTTAGTGTTTAATAAT+AGG | + | chr8_4:21140748-21140767 | None:intergenic | 20.0% |
| !! | TATACAAATACAGATTAGAT+CGG | - | chr8_4:21140882-21140901 | Msa1319000:CDS | 20.0% |
| !!! | AATCACCATAGATTTTTTAA+TGG | + | chr8_4:21141406-21141425 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATCACACATCT+GGG | + | chr8_4:21141472-21141491 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAATCACACATC+TGG | + | chr8_4:21141473-21141492 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAGAGTAAGTAT+TGG | + | chr8_4:21141860-21141879 | None:intergenic | 20.0% |
| !! | TATTTAACACATACTTTATC+CGG | - | chr8_4:21142163-21142182 | Msa1319000:intron | 20.0% |
| !! | GTAAATCGTTTCTTATAAAT+AGG | - | chr8_4:21142281-21142300 | Msa1319000:intron | 20.0% |
| !! | GTAAAAAGAAATTGAAAAGT+TGG | + | chr8_4:21142401-21142420 | None:intergenic | 20.0% |
| !!! | ACAGTTTATCAAAAGTATAA+AGG | - | chr8_4:21142419-21142438 | Msa1319000:intron | 20.0% |
| !!! | CAGTTTATCAAAAGTATAAA+GGG | - | chr8_4:21142420-21142439 | Msa1319000:intron | 20.0% |
| !! | ACAAAAAACAAAAGTGAAAA+CGG | - | chr8_4:21142451-21142470 | Msa1319000:intron | 20.0% |
| !! | CTCTCAAAAAAAAAAATTGA+TGG | + | chr8_4:21142483-21142502 | None:intergenic | 20.0% |
| !!! | CATCAATTTTTTTTTTTGAG+AGG | - | chr8_4:21142481-21142500 | Msa1319000:intron | 20.0% |
| !!! | ATTATACTTGTTTCTTTTAG+GGG | + | chr8_4:21142790-21142809 | None:intergenic | 20.0% |
| !!! | CTATTATACTTGTTTCTTTT+AGG | + | chr8_4:21142792-21142811 | None:intergenic | 20.0% |
| !! | TGTTAAAAACATCTTGTATT+CGG | + | chr8_4:21143050-21143069 | None:intergenic | 20.0% |
| !!! | TTTCTCTTATTTCAAATCTT+TGG | + | chr8_4:21143362-21143381 | None:intergenic | 20.0% |
| !! | TAAGAAATAAATGTTAAGCA+TGG | - | chr8_4:21143487-21143506 | Msa1319000:intron | 20.0% |
| !! | ATTAATGGTACAATACAATA+TGG | - | chr8_4:21143922-21143941 | Msa1319000:intron | 20.0% |
| !! | TTTCATATTTCTCAAATGAA+TGG | - | chr8_4:21143952-21143971 | Msa1319000:intron | 20.0% |
| !! | TGTATTGAATATAGAAGATA+TGG | + | chr8_4:21144447-21144466 | None:intergenic | 20.0% |
| !! | TTAAAAAAGATCTTGTATTC+GGG | + | chr8_4:21144825-21144844 | None:intergenic | 20.0% |
| !! | GTTAAAAAAGATCTTGTATT+CGG | + | chr8_4:21144826-21144845 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTTGGTGAATT+AGG | - | chr8_4:21145152-21145171 | Msa1319000:intron | 20.0% |
| ! | TTTACCCAACTAATTATTGT+AGG | - | chr8_4:21141539-21141558 | Msa1319000:intron | 25.0% |
| !! | GCTATTTATTTGACAACTTT+TGG | + | chr8_4:21141903-21141922 | None:intergenic | 25.0% |
| ! | GATTCCATATTAAATTGATG+AGG | + | chr8_4:21141941-21141960 | None:intergenic | 25.0% |
| !!! | TACTTTATTTTTTGGGTTGT+TGG | - | chr8_4:21142051-21142070 | Msa1319000:intron | 25.0% |
| ! | TTCTTATAAATAGGACATGA+TGG | - | chr8_4:21142290-21142309 | Msa1319000:intron | 25.0% |
| !! | TTCTACCCATATTTTATTGA+AGG | - | chr8_4:21142535-21142554 | Msa1319000:intron | 25.0% |
| ! | AAAATAAAACTCTTGCAAAG+TGG | + | chr8_4:21142653-21142672 | None:intergenic | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | + | chr8_4:21142688-21142707 | None:intergenic | 25.0% |
| ! | GTTAAAAACATCTTGTATTC+GGG | + | chr8_4:21143049-21143068 | None:intergenic | 25.0% |
| ! | AACTATTGGGGAAAATAATT+TGG | + | chr8_4:21143113-21143132 | None:intergenic | 25.0% |
| !! | AATTATTTTCCCCAATAGTT+AGG | - | chr8_4:21143113-21143132 | Msa1319000:intron | 25.0% |
| ! | CTTTATCTTGTAGAAGAAAA+TGG | - | chr8_4:21143161-21143180 | Msa1319000:intron | 25.0% |
| ! | AACAAATTCTTTATTCTGCA+AGG | - | chr8_4:21143461-21143480 | Msa1319000:intron | 25.0% |
| ! | GAAACAAGGATCAAAATTTA+AGG | - | chr8_4:21143750-21143769 | Msa1319000:intron | 25.0% |
| ! | TTTGAACTAATTCATCATCT+GGG | + | chr8_4:21144244-21144263 | None:intergenic | 25.0% |
| !! | TTTTGAACTAATTCATCATC+TGG | + | chr8_4:21144245-21144264 | None:intergenic | 25.0% |
| ! | AGATTTATGCTAACTTACTA+GGG | + | chr8_4:21144384-21144403 | None:intergenic | 25.0% |
| ! | AAGATTTATGCTAACTTACT+AGG | + | chr8_4:21144385-21144404 | None:intergenic | 25.0% |
| ! | GATTGCATTGAAAAAAAGAT+TGG | - | chr8_4:21144560-21144579 | Msa1319000:intron | 25.0% |
| !! | TTTTATGTCATTATAGGGAA+AGG | - | chr8_4:21144620-21144639 | Msa1319000:intron | 25.0% |
| ! | TTTATGTCATTATAGGGAAA+GGG | - | chr8_4:21144621-21144640 | Msa1319000:intron | 25.0% |
| !!! | GATCTTTTTTAACGATCTTT+CGG | - | chr8_4:21144833-21144852 | Msa1319000:CDS | 25.0% |
| !!! | ATCTTTTTTAACGATCTTTC+GGG | - | chr8_4:21144834-21144853 | Msa1319000:CDS | 25.0% |
| ! | TGATGAAATCAAAACTGAAA+TGG | - | chr8_4:21144911-21144930 | Msa1319000:intron | 25.0% |
| ! | GATGAAATCAAAACTGAAAT+GGG | - | chr8_4:21144912-21144931 | Msa1319000:intron | 25.0% |
| ! | TTATTGTTATCTATACCTTC+GGG | + | chr8_4:21145180-21145199 | None:intergenic | 25.0% |
| ! | CTTATTGTTATCTATACCTT+CGG | + | chr8_4:21145181-21145200 | None:intergenic | 25.0% |
| !! | GAAGGTATAGATAACAATAA+GGG | - | chr8_4:21145180-21145199 | Msa1319000:intron | 25.0% |
| TTACAATTATTGCCAGAATG+GGG | + | chr8_4:21140415-21140434 | None:intergenic | 30.0% | |
| CTTACAATTATTGCCAGAAT+GGG | + | chr8_4:21140416-21140435 | None:intergenic | 30.0% | |
| AAAGCTAAAAGAAGCAAGAA+TGG | - | chr8_4:21140777-21140796 | Msa1319000:intron | 30.0% | |
| AAAGTTTATAGGAACGAAGA+GGG | + | chr8_4:21141092-21141111 | None:intergenic | 30.0% | |
| ACAAATATCGTTTCTCTAAG+TGG | + | chr8_4:21141745-21141764 | None:intergenic | 30.0% | |
| ATTTAATATGGAATCAGAGC+CGG | - | chr8_4:21141946-21141965 | Msa1319000:intron | 30.0% | |
| CCAGTTTGCAATTTATAATC+CGG | + | chr8_4:21141968-21141987 | None:intergenic | 30.0% | |
| ! | GTCAACTGTTTCTTGTAAAA+AGG | + | chr8_4:21142190-21142209 | None:intergenic | 30.0% |
| !! | TGTGAATATGTATGGTTTTG+TGG | + | chr8_4:21142337-21142356 | None:intergenic | 30.0% |
| AATCAACGTGTGAATATGTA+TGG | + | chr8_4:21142345-21142364 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | + | chr8_4:21142703-21142722 | None:intergenic | 30.0% | |
| GCATTATTCGTTTACCAAAA+AGG | - | chr8_4:21142750-21142769 | Msa1319000:intron | 30.0% | |
| ! | TCTACTCATACTTTCCTTTT+TGG | + | chr8_4:21142767-21142786 | None:intergenic | 30.0% |
| ! | ACAACTTTTGAATCACATTC+CGG | + | chr8_4:21142832-21142851 | None:intergenic | 30.0% |
| ATGTGATTCAAAAGTTGTTG+TGG | - | chr8_4:21142834-21142853 | Msa1319000:intron | 30.0% | |
| TAGTTTGATGCCTAACTATT+GGG | + | chr8_4:21143126-21143145 | None:intergenic | 30.0% | |
| ATAGTTTGATGCCTAACTAT+TGG | + | chr8_4:21143127-21143146 | None:intergenic | 30.0% | |
| ! | AAAATGGCCCTTATTTCATT+TGG | - | chr8_4:21143177-21143196 | Msa1319000:intron | 30.0% |
| TTCACGTCCAAATGAAATAA+GGG | + | chr8_4:21143187-21143206 | None:intergenic | 30.0% | |
| TTTCACGTCCAAATGAAATA+AGG | + | chr8_4:21143188-21143207 | None:intergenic | 30.0% | |
| ! | TATTTCAAATCTTTGGAGGT+TGG | + | chr8_4:21143355-21143374 | None:intergenic | 30.0% |
| ! | CTCTTATTTCAAATCTTTGG+AGG | + | chr8_4:21143359-21143378 | None:intergenic | 30.0% |
| ATGTGTGTATAAGTTGCATA+AGG | - | chr8_4:21143391-21143410 | Msa1319000:intron | 30.0% | |
| GTATATATGAAAGAAAACGC+AGG | - | chr8_4:21143511-21143530 | Msa1319000:intron | 30.0% | |
| ! | AATTTCTGGAAAACTTCAAG+TGG | - | chr8_4:21143642-21143661 | Msa1319000:intron | 30.0% |
| CAATTAAACCAGATGAAACA+AGG | - | chr8_4:21143736-21143755 | Msa1319000:intron | 30.0% | |
| !! | ATTTTGATCCTTGTTTCATC+TGG | + | chr8_4:21143747-21143766 | None:intergenic | 30.0% |
| ! | AGGATCAAAATTTAAGGTCT+CGG | - | chr8_4:21143756-21143775 | Msa1319000:intron | 30.0% |
| ATCAATTGTCTGAACATAGT+TGG | + | chr8_4:21143801-21143820 | None:intergenic | 30.0% | |
| ACTATGTTCAGACAATTGAT+TGG | - | chr8_4:21143801-21143820 | Msa1319000:intron | 30.0% | |
| TGTATCTGGAGATACATTAA+TGG | - | chr8_4:21143907-21143926 | Msa1319000:intron | 30.0% | |
| !! | AGCAATCACATATTGCTTTT+TGG | + | chr8_4:21144093-21144112 | None:intergenic | 30.0% |
| TAGAACTAAGATATGTGATG+AGG | - | chr8_4:21144189-21144208 | Msa1319000:intron | 30.0% | |
| ACTAATTCCTAATTAGTGTC+AGG | + | chr8_4:21144298-21144317 | None:intergenic | 30.0% | |
| GACACTAATTAGGAATTAGT+TGG | - | chr8_4:21144298-21144317 | Msa1319000:intron | 30.0% | |
| TTATGTCATTATAGGGAAAG+GGG | - | chr8_4:21144622-21144641 | Msa1319000:intron | 30.0% | |
| GAGATGCATATTTCAATTGT+TGG | + | chr8_4:21144803-21144822 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTAACGATCTTTCG+GGG | - | chr8_4:21144835-21144854 | Msa1319000:CDS | 30.0% |
| AACTCTATCATAGAAAGAAC+CGG | + | chr8_4:21144961-21144980 | None:intergenic | 30.0% | |
| ! | CGAAGGTATAGATAACAATA+AGG | - | chr8_4:21145179-21145198 | Msa1319000:intron | 30.0% |
| CCTTACAATTATTGCCAGAA+TGG | + | chr8_4:21140417-21140436 | None:intergenic | 35.0% | |
| CCATTCTGGCAATAATTGTA+AGG | - | chr8_4:21140414-21140433 | Msa1319000:CDS | 35.0% | |
| ATTCCTTAACCATTACCCTT+AGG | + | chr8_4:21140511-21140530 | None:intergenic | 35.0% | |
| ! | TCTATCTATGGGTTGTTGTA+TGG | - | chr8_4:21140722-21140741 | Msa1319000:CDS | 35.0% |
| !! | TGCAAACAACTCATTTTTCC+AGG | - | chr8_4:21140849-21140868 | Msa1319000:CDS | 35.0% |
| ! | TCGGTTGACTCTAAATAGAT+CGG | - | chr8_4:21140901-21140920 | Msa1319000:CDS | 35.0% |
| GAAAGTTTATAGGAACGAAG+AGG | + | chr8_4:21141093-21141112 | None:intergenic | 35.0% | |
| TGCTCGCAAGATAAATTTGT+TGG | - | chr8_4:21141445-21141464 | Msa1319000:intron | 35.0% | |
| GGCTCCTACAATAATTAGTT+GGG | + | chr8_4:21141546-21141565 | None:intergenic | 35.0% | |
| AGGCTCCTACAATAATTAGT+TGG | + | chr8_4:21141547-21141566 | None:intergenic | 35.0% | |
| AATCATATATCGGCAGTTGA+AGG | + | chr8_4:21141567-21141586 | None:intergenic | 35.0% | |
| ACATAAGAAATGCTAAGTGG+GGG | + | chr8_4:21141643-21141662 | None:intergenic | 35.0% | |
| CACATAAGAAATGCTAAGTG+GGG | + | chr8_4:21141644-21141663 | None:intergenic | 35.0% | |
| CCACATAAGAAATGCTAAGT+GGG | + | chr8_4:21141645-21141664 | None:intergenic | 35.0% | |
| TTGATGCACCATATTGTTGA+CGG | - | chr8_4:21141672-21141691 | Msa1319000:intron | 35.0% | |
| TCTAAGAACCGTCAACAATA+TGG | + | chr8_4:21141683-21141702 | None:intergenic | 35.0% | |
| CACGCCTCATCAATTTAATA+TGG | - | chr8_4:21141934-21141953 | Msa1319000:intron | 35.0% | |
| CCGGATTATAAATTGCAAAC+TGG | - | chr8_4:21141965-21141984 | Msa1319000:intron | 35.0% | |
| ! | CTGTTTCTTGTAAAAAGGAC+CGG | + | chr8_4:21142185-21142204 | None:intergenic | 35.0% |
| TAAAACTCTTGCAAAGTGGT+GGG | + | chr8_4:21142649-21142668 | None:intergenic | 35.0% | |
| ATAAAACTCTTGCAAAGTGG+TGG | + | chr8_4:21142650-21142669 | None:intergenic | 35.0% | |
| GAAATGTTAAACATGCCTTG+TGG | - | chr8_4:21142856-21142875 | Msa1319000:intron | 35.0% | |
| CTAGAACATGAACACTAGTA+GGG | + | chr8_4:21143015-21143034 | None:intergenic | 35.0% | |
| ! | TCTAGAACATGAACACTAGT+AGG | + | chr8_4:21143016-21143035 | None:intergenic | 35.0% |
| ! | ACTAGTGTTCATGTTCTAGA+TGG | - | chr8_4:21143016-21143035 | Msa1319000:intron | 35.0% |
| AGTTTGATGCCTAACTATTG+GGG | + | chr8_4:21143125-21143144 | None:intergenic | 35.0% | |
| !! | TTTCTTTTAATGGACCATCC+AGG | + | chr8_4:21143219-21143238 | None:intergenic | 35.0% |
| ! | TTTCTTTTGTTCCAAGCTCT+CGG | + | chr8_4:21143440-21143459 | None:intergenic | 35.0% |
| TATATGAAAGAAAACGCAGG+AGG | - | chr8_4:21143514-21143533 | Msa1319000:intron | 35.0% | |
| TTGTTCCTACCAATTACCAT+CGG | + | chr8_4:21143574-21143593 | None:intergenic | 35.0% | |
| GTAATTGGTAGGAACAAAGT+TGG | - | chr8_4:21143577-21143596 | Msa1319000:intron | 35.0% | |
| CTTTCTATGAGTGGAATTTC+TGG | - | chr8_4:21143628-21143647 | Msa1319000:intron | 35.0% | |
| AAGTGGTCTAATTATGCATC+AGG | - | chr8_4:21143659-21143678 | Msa1319000:intron | 35.0% | |
| TGCTCAAGAATCTATTAGTC+AGG | + | chr8_4:21143855-21143874 | None:intergenic | 35.0% | |
| ! | TGCTTGCTACAAAATGTATC+TGG | - | chr8_4:21143893-21143912 | Msa1319000:intron | 35.0% |
| !! | TGAATGGTAAGCTCTGAAAA+TGG | - | chr8_4:21143968-21143987 | Msa1319000:intron | 35.0% |
| ! | TTTAGATGTTGATAGACGTG+AGG | - | chr8_4:21143998-21144017 | Msa1319000:intron | 35.0% |
| GTAGACAGAAAGAGAACAAA+TGG | - | chr8_4:21144026-21144045 | Msa1319000:intron | 35.0% | |
| ! | TTTAAGGTACACCAATCTCA+TGG | - | chr8_4:21144063-21144082 | Msa1319000:intron | 35.0% |
| !!! | TTTTTGGAACACCATGAGAT+TGG | + | chr8_4:21144077-21144096 | None:intergenic | 35.0% |
| AAGTCAATAGTAACCACAGA+GGG | - | chr8_4:21144215-21144234 | Msa1319000:intron | 35.0% | |
| GTATATGCCTGACACTAATT+AGG | - | chr8_4:21144288-21144307 | Msa1319000:intron | 35.0% | |
| ATGGAGATATCAAAACGCAA+GGG | + | chr8_4:21144428-21144447 | None:intergenic | 35.0% | |
| TATGGAGATATCAAAACGCA+AGG | + | chr8_4:21144429-21144448 | None:intergenic | 35.0% | |
| TGTTGTCTCAGAAATCATCA+TGG | - | chr8_4:21144761-21144780 | Msa1319000:intron | 35.0% | |
| ACTCTATCATAGAAAGAACC+GGG | + | chr8_4:21144960-21144979 | None:intergenic | 35.0% | |
| TCTTCTTAACCAGTGTCCTA+AGG | - | chr8_4:21140492-21140511 | Msa1319000:intron | 40.0% | |
| CTTCTTAACCAGTGTCCTAA+GGG | - | chr8_4:21140493-21140512 | Msa1319000:intron | 40.0% | |
| ! | TGTCCTAAGGGTAATGGTTA+AGG | - | chr8_4:21140505-21140524 | Msa1319000:intron | 40.0% |
| ATCAATGTCCTTGAGACACT+CGG | - | chr8_4:21140635-21140654 | Msa1319000:intron | 40.0% | |
| AAAAGAAGCAAGAATGGACG+TGG | - | chr8_4:21140783-21140802 | Msa1319000:intron | 40.0% | |
| AAAGAAGCAAGAATGGACGT+GGG | - | chr8_4:21140784-21140803 | Msa1319000:intron | 40.0% | |
| AAGATAGTGCACATGAATGG+AGG | - | chr8_4:21140808-21140827 | Msa1319000:CDS | 40.0% | |
| TTTGTATATGTGTGCGTACC+TGG | + | chr8_4:21140870-21140889 | None:intergenic | 40.0% | |
| ! | CGGTTGACTCTAAATAGATC+GGG | - | chr8_4:21140902-21140921 | Msa1319000:CDS | 40.0% |
| ! | ATCACCAAGCTTGAGTTTTC+TGG | - | chr8_4:21140935-21140954 | Msa1319000:CDS | 40.0% |
| TCTCAACGTTTCATAGCCAT+AGG | + | chr8_4:21140994-21141013 | None:intergenic | 40.0% | |
| CCCACTTAGCATTTCTTATG+TGG | - | chr8_4:21141642-21141661 | Msa1319000:intron | 40.0% | |
| GCCACATAAGAAATGCTAAG+TGG | + | chr8_4:21141646-21141665 | None:intergenic | 40.0% | |
| TCATCCCAAGACGTAATGTT+TGG | - | chr8_4:21141705-21141724 | Msa1319000:intron | 40.0% | |
| CACTCCAAACATTACGTCTT+GGG | + | chr8_4:21141712-21141731 | None:intergenic | 40.0% | |
| TCACTCCAAACATTACGTCT+TGG | + | chr8_4:21141713-21141732 | None:intergenic | 40.0% | |
| ACGATATTCACCTCTATCGT+GGG | + | chr8_4:21142006-21142025 | None:intergenic | 40.0% | |
| TACGATATTCACCTCTATCG+TGG | + | chr8_4:21142007-21142026 | None:intergenic | 40.0% | |
| ! | GTGTTGCTAGCATTTCTCTT+TGG | + | chr8_4:21142582-21142601 | None:intergenic | 40.0% |
| GTTCGGATCATCTGCTAAAA+AGG | + | chr8_4:21142892-21142911 | None:intergenic | 40.0% | |
| TTTAGCACACCACAACTTCT+AGG | + | chr8_4:21142914-21142933 | None:intergenic | 40.0% | |
| ! | CAATGTCGTTGCTGATTGTT+TGG | - | chr8_4:21142969-21142988 | Msa1319000:intron | 40.0% |
| AAGTTGCATAAGGCTCTCTA+TGG | - | chr8_4:21143401-21143420 | Msa1319000:intron | 40.0% | |
| CTTATATGTGAATGACCCGA+TGG | - | chr8_4:21143555-21143574 | Msa1319000:intron | 40.0% | |
| TGTTCCTACCAATTACCATC+GGG | + | chr8_4:21143573-21143592 | None:intergenic | 40.0% | |
| ! | TCTATTAGTCAGGCTTGCTT+TGG | + | chr8_4:21143845-21143864 | None:intergenic | 40.0% |
| !! | TGGTAAGCTCTGAAAATGGA+AGG | - | chr8_4:21143972-21143991 | Msa1319000:intron | 40.0% |
| GGCTACTTGTTCAAGCTTTA+AGG | - | chr8_4:21144047-21144066 | Msa1319000:intron | 40.0% | |
| AGAATATGTGGTAGGGTCAT+TGG | - | chr8_4:21144130-21144149 | Msa1319000:intron | 40.0% | |
| !!! | TGGTTGCTTTTCAAGCAAAC+TGG | - | chr8_4:21144150-21144169 | Msa1319000:intron | 40.0% |
| CAAGTCAATAGTAACCACAG+AGG | - | chr8_4:21144214-21144233 | Msa1319000:intron | 40.0% | |
| TGGAGATATCAAAACGCAAG+GGG | + | chr8_4:21144427-21144446 | None:intergenic | 40.0% | |
| CTCAGAAATCATCATGGTTG+TGG | - | chr8_4:21144767-21144786 | Msa1319000:intron | 40.0% | |
| TAAGCCTTGACGACATTTGA+GGG | + | chr8_4:21145231-21145250 | None:intergenic | 40.0% | |
| AACCAGTGTCCTAAGGGTAA+TGG | - | chr8_4:21140499-21140518 | Msa1319000:intron | 45.0% | |
| AACCATTACCCTTAGGACAC+TGG | + | chr8_4:21140504-21140523 | None:intergenic | 45.0% | |
| GAATGTTACCGAGTGTCTCA+AGG | + | chr8_4:21140646-21140665 | None:intergenic | 45.0% | |
| AAGAAGCAAGAATGGACGTG+GGG | - | chr8_4:21140785-21140804 | Msa1319000:intron | 45.0% | |
| GGGAAGATAGTGCACATGAA+TGG | - | chr8_4:21140805-21140824 | Msa1319000:CDS | 45.0% | |
| !! | TTTTCTGGCGACTGTAGTCA+TGG | - | chr8_4:21140950-21140969 | Msa1319000:CDS | 45.0% |
| GTGACTTTAGCATCTGCCTA+TGG | - | chr8_4:21140975-21140994 | Msa1319000:CDS | 45.0% | |
| ! | TCACCTCTATCGTGGGTTAT+GGG | + | chr8_4:21141999-21142018 | None:intergenic | 45.0% |
| ! | TTCACCTCTATCGTGGGTTA+TGG | + | chr8_4:21142000-21142019 | None:intergenic | 45.0% |
| AGAAATTTGGAGACTCGTGC+CGG | - | chr8_4:21142810-21142829 | Msa1319000:intron | 45.0% | |
| AAAGGACGTGAATCACCACA+AGG | + | chr8_4:21142874-21142893 | None:intergenic | 45.0% | |
| TGATCCGAACCTAGAAGTTG+TGG | - | chr8_4:21142902-21142921 | Msa1319000:intron | 45.0% | |
| CACACCACAACTTCTAGGTT+CGG | + | chr8_4:21142909-21142928 | None:intergenic | 45.0% | |
| GTGAATGACCCGATGGTAAT+TGG | - | chr8_4:21143562-21143581 | Msa1319000:intron | 45.0% | |
| ATGACCCGATGGTAATTGGT+AGG | - | chr8_4:21143566-21143585 | Msa1319000:intron | 45.0% | |
| GCTCGCTTACTTTCTATGAG+TGG | - | chr8_4:21143619-21143638 | Msa1319000:intron | 45.0% | |
| CTACCACATATTCTGCCTCA+CGG | + | chr8_4:21144124-21144143 | None:intergenic | 45.0% | |
| GTGAGGCAGAATATGTGGTA+GGG | - | chr8_4:21144123-21144142 | Msa1319000:intron | 45.0% | |
| TCTGCAATTGCAAGGCTTCT+GGG | + | chr8_4:21144708-21144727 | None:intergenic | 45.0% | |
| ATCTGCAATTGCAAGGCTTC+TGG | + | chr8_4:21144709-21144728 | None:intergenic | 45.0% | |
| AAGCCTTGCAATTGCAGATC+TGG | - | chr8_4:21144710-21144729 | Msa1319000:intron | 45.0% | |
| AGCCTTGCAATTGCAGATCT+GGG | - | chr8_4:21144711-21144730 | Msa1319000:intron | 45.0% | |
| AACCCAGATCTGCAATTGCA+AGG | + | chr8_4:21144716-21144735 | None:intergenic | 45.0% | |
| ! | ATGGGTCCTTGCTACTTCTT+TGG | - | chr8_4:21144930-21144949 | Msa1319000:intron | 45.0% |
| GGAACACCAAAGAAGTAGCA+AGG | + | chr8_4:21144939-21144958 | None:intergenic | 45.0% | |
| !! | TGCTACTTCTTTGGTGTTCC+CGG | - | chr8_4:21144939-21144958 | Msa1319000:intron | 45.0% |
| ACGAAATGCAGACTTCGATC+TGG | + | chr8_4:21144987-21145006 | None:intergenic | 45.0% | |
| AGTGAAGACTGTAAGAGCAG+TGG | + | chr8_4:21145010-21145029 | None:intergenic | 45.0% | |
| ACTGCTCTTACAGTCTTCAC+TGG | - | chr8_4:21145009-21145028 | Msa1319000:intron | 45.0% | |
| ! | CAGTCTTCACTGGCTATCAA+AGG | - | chr8_4:21145019-21145038 | Msa1319000:intron | 45.0% |
| TTGGTGAATTAGGTTCCCGA+AGG | - | chr8_4:21145162-21145181 | Msa1319000:intron | 45.0% | |
| AAGTCCCTCAAATGTCGTCA+AGG | - | chr8_4:21145224-21145243 | Msa1319000:intron | 45.0% | |
| GTAAGCCTTGACGACATTTG+AGG | + | chr8_4:21145232-21145251 | None:intergenic | 45.0% | |
| !! | TTTTCTCAAGTGTCGCGCAA+AGG | - | chr8_4:21145281-21145300 | Msa1319000:intron | 45.0% |
| GCGCAAAGGAATTGGTTGAA+GGG | - | chr8_4:21145295-21145314 | Msa1319000:intron | 45.0% | |
| CGCAAAGGAATTGGTTGAAG+GGG | - | chr8_4:21145296-21145315 | Msa1319000:intron | 45.0% | |
| GCAAAGGAATTGGTTGAAGG+GGG | - | chr8_4:21145297-21145316 | Msa1319000:intron | 45.0% | |
| !! | TTTAAAAAAATAAAAATAAC+AGG | - | chr8_4:21140384-21140403 | Msa1319000:CDS | 5.0% |
| !!! | TTTTTTATTTTTGTTAATAT+GGG | + | chr8_4:21141331-21141350 | None:intergenic | 5.0% |
| !!! | TTTTTTTATTTTTGTTAATA+TGG | + | chr8_4:21141332-21141351 | None:intergenic | 5.0% |
| !! | AAAATAAAAAAAAAATTGTA+TGG | - | chr8_4:21141340-21141359 | Msa1319000:intron | 5.0% |
| !! | AAATAAAAAAAAAATTGTAT+GGG | - | chr8_4:21141341-21141360 | Msa1319000:intron | 5.0% |
| !!! | NNNNNNNAAATTTCTTTTAA+TGG | + | chr8_4:21143229-21143248 | None:intergenic | 5.0% |
| GTCGCCAGAAAACTCAAGCT+TGG | + | chr8_4:21140942-21140961 | None:intergenic | 50.0% | |
| TGACCCATAACCCACGATAG+AGG | - | chr8_4:21141993-21142012 | Msa1319000:intron | 50.0% | |
| GTGAAACCAGCTTTCCTGGA+TGG | - | chr8_4:21143202-21143221 | Msa1319000:intron | 50.0% | |
| AATGGACCATCCAGGAAAGC+TGG | + | chr8_4:21143211-21143230 | None:intergenic | 50.0% | |
| TGAAACAAGCTCCGAGAGCT+TGG | - | chr8_4:21143426-21143445 | Msa1319000:intron | 50.0% | |
| GATTGCTCTATCTAGCCGTG+AGG | - | chr8_4:21144106-21144125 | Msa1319000:intron | 50.0% | |
| TAGCCGTGAGGCAGAATATG+TGG | - | chr8_4:21144118-21144137 | Msa1319000:intron | 50.0% | |
| CGTGAGGCAGAATATGTGGT+AGG | - | chr8_4:21144122-21144141 | Msa1319000:intron | 50.0% | |
| ! | GCTGGAGTAGAGGCTAGTTA+TGG | + | chr8_4:21144679-21144698 | None:intergenic | 50.0% |
| ! | TGGGAAGTATGCTGGAGTAG+AGG | + | chr8_4:21144689-21144708 | None:intergenic | 50.0% |
| ! | AAGGCTTCTGGGAAGTATGC+TGG | + | chr8_4:21144697-21144716 | None:intergenic | 50.0% |
| GCAGATCTGGGTTGTTCTTG+TGG | - | chr8_4:21144723-21144742 | Msa1319000:intron | 50.0% | |
| ! | CAAGTGTCGCGCAAAGGAAT+TGG | - | chr8_4:21145287-21145306 | Msa1319000:intron | 50.0% |
| CGCGCAAAGGAATTGGTTGA+AGG | - | chr8_4:21145294-21145313 | Msa1319000:intron | 50.0% | |
| TAACAGGCATGGCCCCATTC+TGG | - | chr8_4:21140400-21140419 | Msa1319000:CDS | 55.0% | |
| GTGCACATGAATGGAGGCGA+TGG | - | chr8_4:21140814-21140833 | Msa1319000:CDS | 55.0% | |
| TCTGGCGACTGTAGTCATGG+TGG | - | chr8_4:21140953-21140972 | Msa1319000:CDS | 55.0% | |
| GGACGTGAAACCAGCTTTCC+TGG | - | chr8_4:21143198-21143217 | Msa1319000:intron | 55.0% | |
| ATCATCTGGGTGACCCTCTG+TGG | + | chr8_4:21144231-21144250 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 21140353 | 21145326 | 21140353 | ID=Msa1319000;Name=Msa1319000 |
| chr8_4 | mRNA | 21140353 | 21145326 | 21140353 | ID=Msa1319000-mRNA-1;Parent=Msa1319000;Name=Msa1319000-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.25|0|0.8|0.5|0|5|0|217 |
| chr8_4 | exon | 21145320 | 21145326 | 21145320 | ID=Msa1319000-mRNA-1:exon:7713;Parent=Msa1319000-mRNA-1 |
| chr8_4 | exon | 21144809 | 21144906 | 21144809 | ID=Msa1319000-mRNA-1:exon:7712;Parent=Msa1319000-mRNA-1 |
| chr8_4 | exon | 21140799 | 21141043 | 21140799 | ID=Msa1319000-mRNA-1:exon:7711;Parent=Msa1319000-mRNA-1 |
| chr8_4 | exon | 21140639 | 21140786 | 21140639 | ID=Msa1319000-mRNA-1:exon:7710;Parent=Msa1319000-mRNA-1 |
| chr8_4 | exon | 21140353 | 21140505 | 21140353 | ID=Msa1319000-mRNA-1:exon:7709;Parent=Msa1319000-mRNA-1 |
| chr8_4 | CDS | 21145320 | 21145326 | 21145320 | ID=Msa1319000-mRNA-1:cds;Parent=Msa1319000-mRNA-1 |
| chr8_4 | CDS | 21144809 | 21144906 | 21144809 | ID=Msa1319000-mRNA-1:cds;Parent=Msa1319000-mRNA-1 |
| chr8_4 | CDS | 21140799 | 21141043 | 21140799 | ID=Msa1319000-mRNA-1:cds;Parent=Msa1319000-mRNA-1 |
| chr8_4 | CDS | 21140639 | 21140786 | 21140639 | ID=Msa1319000-mRNA-1:cds;Parent=Msa1319000-mRNA-1 |
| chr8_4 | CDS | 21140353 | 21140505 | 21140353 | ID=Msa1319000-mRNA-1:cds;Parent=Msa1319000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
