Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1324830 | sp|D0EL35|CTC1_ARATH | 33.126 | 1123 | 603 | 31 | 3 | 1072 | 245 | 1272 | 4.81e-150 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1324830 | A0A396GK27 | 95.616 | 1072 | 47 | 0 | 1 | 1072 | 258 | 1329 | 0.0 | 2050 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027280 | Msa1324830 | 0.804654 | 1.947180e-49 | -8.615850e-47 |
| Msa0795870 | Msa1324830 | 0.805365 | 1.382718e-49 | -8.615850e-47 |
| Msa1298220 | Msa1324830 | 0.801521 | 8.658066e-49 | -8.615850e-47 |
| Msa1324830 | Msa1324860 | 0.856935 | 2.297399e-62 | -8.615850e-47 |
| Msa1324830 | Msa1390440 | 0.812075 | 5.086780e-51 | -8.615850e-47 |
| Msa1206460 | Msa1324830 | 0.804076 | 2.569457e-49 | -8.615850e-47 |
| Msa0530780 | Msa1324830 | 0.802376 | 5.778692e-49 | -8.615850e-47 |
| Msa0580370 | Msa1324830 | 0.800390 | 1.474047e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1324830 | MtrunA17_Chr8g0358171 | 95.616 | 1072 | 47 | 0 | 1 | 1072 | 258 | 1329 | 0.0 | 2050 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1324830 | AT4G09680.4 | 33.126 | 1123 | 603 | 31 | 3 | 1072 | 245 | 1272 | 4.89e-151 | 483 |
| Msa1324830 | AT4G09680.1 | 33.067 | 1125 | 603 | 32 | 3 | 1072 | 245 | 1274 | 3.76e-149 | 478 |
| Msa1324830 | AT4G09680.3 | 32.782 | 967 | 521 | 29 | 1 | 933 | 243 | 1114 | 6.05e-120 | 397 |
| Msa1324830 | AT4G09680.2 | 47.664 | 214 | 109 | 3 | 1 | 214 | 243 | 453 | 5.43e-52 | 191 |
Find 195 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCAAGATCTTGTTGTTTC+TGG | 0.094175 | 8_4:+35624405 | Msa1324830:CDS |
| CTTATCTGACAAAGAGATTT+TGG | 0.101255 | 8_4:+35619476 | Msa1324830:CDS |
| GCTAAATTTCTTATTGATTC+TGG | 0.141849 | 8_4:+35622560 | Msa1324830:CDS |
| TTACATCCATGCAATGTTTA+TGG | 0.155997 | 8_4:+35621990 | Msa1324830:CDS |
| CTTGTACTTCTTCAAAATTC+TGG | 0.191376 | 8_4:-35624340 | None:intergenic |
| CGATTTCTGTTTACTGTCTT+TGG | 0.200152 | 8_4:+35620865 | Msa1324830:CDS |
| TATCTACCTGTCAACCTTAC+AGG | 0.241861 | 8_4:+35622713 | Msa1324830:CDS |
| GAGATTGAAGAGTGAGATTA+AGG | 0.253781 | 8_4:+35618374 | Msa1324830:CDS |
| GAAATTGGTTTATATAAATA+AGG | 0.261900 | 8_4:+35618275 | Msa1324830:CDS |
| TGGTAATCGTATTGTTGTTT+TGG | 0.269535 | 8_4:+35618242 | Msa1324830:CDS |
| TGGACTAAAGTTGTTATTCT+TGG | 0.276210 | 8_4:+35618717 | Msa1324830:CDS |
| TGCTTGATTTCCCAGTTGCC+TGG | 0.278123 | 8_4:+35623669 | Msa1324830:CDS |
| TTGATTCTGGAAAACATATA+TGG | 0.280576 | 8_4:+35622573 | Msa1324830:CDS |
| ACAAGTAAAATACCAGTTTC+AGG | 0.282330 | 8_4:-35619813 | None:intergenic |
| TTGTCCGCGTTTGGAGAAAT+TGG | 0.284725 | 8_4:+35618347 | Msa1324830:CDS |
| TTTGGGTTTGAAGAAGAAAT+TGG | 0.284787 | 8_4:+35618260 | Msa1324830:CDS |
| TACCAGAGTCTTGCTGAAAA+TGG | 0.295516 | 8_4:-35619314 | None:intergenic |
| TGCTTGCTCTAATACATTTA+CGG | 0.300110 | 8_4:+35622151 | Msa1324830:CDS |
| ACCTGATCTACTATTATATC+TGG | 0.303455 | 8_4:-35620163 | None:intergenic |
| TTCATGTTCAAGTCTTAATA+AGG | 0.309686 | 8_4:-35624295 | None:intergenic |
| GAATTCTAAAGGGATTCTTT+TGG | 0.310476 | 8_4:+35623874 | Msa1324830:CDS |
| GGACTAAAGTTGTTATTCTT+GGG | 0.315254 | 8_4:+35618718 | Msa1324830:CDS |
| ATTCTGTTACATTATCTTCC+AGG | 0.321634 | 8_4:-35622739 | None:intergenic |
| AACAAAAGTACTTGACTTGT+TGG | 0.328620 | 8_4:-35621916 | None:intergenic |
| TTCAAATGAAAGGCCTTGTT+GGG | 0.328637 | 8_4:+35622990 | Msa1324830:CDS |
| GGTCATCATCATGTTATTGC+TGG | 0.333536 | 8_4:+35624250 | Msa1324830:CDS |
| TACATCCATGCAATGTTTAT+GGG | 0.340257 | 8_4:+35621991 | Msa1324830:CDS |
| TTTGCATGTTTGTCCGCGTT+TGG | 0.343625 | 8_4:+35618338 | Msa1324830:CDS |
| TGTCCGCGTTTGGAGAAATT+GGG | 0.344279 | 8_4:+35618348 | Msa1324830:CDS |
| TGCTGTTGAATTTGAACTTT+AGG | 0.344333 | 8_4:-35622638 | None:intergenic |
| AAAGGCCTTGTTGGGGATAA+AGG | 0.350232 | 8_4:+35622998 | Msa1324830:CDS |
| CTAATATTTGTTTCAACATT+GGG | 0.357992 | 8_4:+35622807 | Msa1324830:CDS |
| TTTCCGACTGGTTTCGGACC+TGG | 0.374945 | 8_4:+35623188 | Msa1324830:CDS |
| GCCACAAATGATGCTGCTTT+TGG | 0.376493 | 8_4:+35622524 | Msa1324830:CDS |
| GCATTGCGGTTTCCTGAAAC+TGG | 0.376513 | 8_4:+35619801 | Msa1324830:CDS |
| TTTGACCTCAAATATGTCAT+TGG | 0.379757 | 8_4:-35620548 | None:intergenic |
| CTTCAAATGAAAGGCCTTGT+TGG | 0.380467 | 8_4:+35622989 | Msa1324830:CDS |
| AGCAAATAGTGCTTCGATGC+AGG | 0.381329 | 8_4:+35623706 | Msa1324830:CDS |
| GTCATTCACAATTTGATCAT+AGG | 0.381772 | 8_4:-35625011 | None:intergenic |
| AGTCTCTTGCTCACGTGGTC+TGG | 0.384796 | 8_4:+35624945 | Msa1324830:CDS |
| CTGTGTAGACATGACTTTAA+TGG | 0.386441 | 8_4:+35619763 | Msa1324830:CDS |
| GCCAGATATAATAGTAGATC+AGG | 0.390127 | 8_4:+35620162 | Msa1324830:CDS |
| CTTAACAAGTTTCTGCCTCT+TGG | 0.390575 | 8_4:-35622075 | None:intergenic |
| CAAATTCCCTTTGCAAGAAA+AGG | 0.397648 | 8_4:+35620992 | Msa1324830:CDS |
| GAAGCTAAGATACTTGAATC+TGG | 0.400217 | 8_4:+35620942 | Msa1324830:CDS |
| GGTGAGTGTGGTTGTTATAC+TGG | 0.401976 | 8_4:+35618402 | Msa1324830:CDS |
| ATTTCTGATGATGCCATTGA+TGG | 0.420230 | 8_4:+35622608 | Msa1324830:CDS |
| GCTTGATTTCCCAGTTGCCT+GGG | 0.421308 | 8_4:+35623670 | Msa1324830:CDS |
| ATCAACCAGCTGCAGTCTTC+TGG | 0.425051 | 8_4:-35620473 | None:intergenic |
| GCTAAATCGTCTTCCGACTT+TGG | 0.430646 | 8_4:-35620838 | None:intergenic |
| TACCAGACCTTCCCTTGACT+TGG | 0.435278 | 8_4:+35620521 | Msa1324830:CDS |
| ATTATATACCAATATATAGT+TGG | 0.437695 | 8_4:+35625066 | Msa1324830:three_prime_UTR |
| AGTCAATGTAGAATCTGATA+TGG | 0.441519 | 8_4:-35625033 | None:intergenic |
| AGCTGCAGTCTTCTGGTCAA+TGG | 0.441656 | 8_4:-35620466 | None:intergenic |
| TTTAGATGCGTATCTTTACT+AGG | 0.442160 | 8_4:-35622293 | None:intergenic |
| GCTAATATTTGTTTCAACAT+TGG | 0.443465 | 8_4:+35622806 | Msa1324830:CDS |
| TTACATGAAAGGGATGGCTT+TGG | 0.444672 | 8_4:+35618440 | Msa1324830:CDS |
| TTCCAAGTCAAGGGAAGGTC+TGG | 0.447339 | 8_4:-35620523 | None:intergenic |
| CCGTCCAACAATAAAATGTA+AGG | 0.447352 | 8_4:-35621954 | None:intergenic |
| TTTCAGTTGTTGCATATTGG+TGG | 0.449352 | 8_4:+35622461 | Msa1324830:intron |
| TTAGAGGTGTTTACATGAAA+GGG | 0.449473 | 8_4:+35618430 | Msa1324830:CDS |
| GAAAGGGATGGCTTTGGAGT+TGG | 0.453135 | 8_4:+35618446 | Msa1324830:CDS |
| TCTCTCAAGGGAAATGTAGT+TGG | 0.454250 | 8_4:+35622905 | Msa1324830:CDS |
| CACCAGAAACAACAAGATCT+TGG | 0.461069 | 8_4:-35624407 | None:intergenic |
| TGTTATACTGGTGTAATTAG+AGG | 0.462312 | 8_4:+35618414 | Msa1324830:CDS |
| ATTAGAGGTGTTTACATGAA+AGG | 0.462599 | 8_4:+35618429 | Msa1324830:CDS |
| GAAGAGTGAGATTAAGGGGA+AGG | 0.462781 | 8_4:+35618380 | Msa1324830:CDS |
| GCCAAAAGCAGCATCATTTG+TGG | 0.463829 | 8_4:-35622525 | None:intergenic |
| TTGTTTGATGTATTTGACTT+TGG | 0.467382 | 8_4:+35618305 | Msa1324830:CDS |
| GAATTCCAATGACATATTTG+AGG | 0.467831 | 8_4:+35620543 | Msa1324830:CDS |
| AGATGCATATAGTGTGTCTC+AGG | 0.473695 | 8_4:+35623635 | Msa1324830:CDS |
| GAATGAATACCTTACACATA+TGG | 0.474566 | 8_4:+35624885 | Msa1324830:CDS |
| TTCTGCAATTCATGCTCAAG+TGG | 0.474828 | 8_4:+35622950 | Msa1324830:CDS |
| TGAGCATGAATTGCAGAAAC+CGG | 0.475727 | 8_4:-35622945 | None:intergenic |
| GACACTCGAAGAATCATCAT+TGG | 0.477926 | 8_4:-35622672 | None:intergenic |
| AACAAGTTTCTGCCTCTTGG+AGG | 0.483845 | 8_4:-35622072 | None:intergenic |
| GATTGAAGAGTGAGATTAAG+GGG | 0.488266 | 8_4:+35618376 | Msa1324830:CDS |
| CTGCAGCTGGTTGATGCTAC+TGG | 0.488720 | 8_4:+35620481 | Msa1324830:CDS |
| CAGTGTAAATTATTGTCTGT+TGG | 0.490869 | 8_4:+35620111 | Msa1324830:CDS |
| TTTAGCACATATATTCTGCA+TGG | 0.492647 | 8_4:-35624920 | None:intergenic |
| GAACATGAACCCACTACATC+AGG | 0.494740 | 8_4:+35624309 | Msa1324830:CDS |
| TATCTTCCAGGAGACCTGTA+AGG | 0.496163 | 8_4:-35622727 | None:intergenic |
| AGGAGACCTGTAAGGTTGAC+AGG | 0.496631 | 8_4:-35622719 | None:intergenic |
| CAACTACATACTTTGATGCA+TGG | 0.496833 | 8_4:+35618498 | Msa1324830:CDS |
| ATGTAGAGCGCAACAGAGCC+TGG | 0.496914 | 8_4:-35622268 | None:intergenic |
| TTTCTGATGATGCCATTGAT+GGG | 0.500278 | 8_4:+35622609 | Msa1324830:CDS |
| ACATTGGGACTGTAGTGGCT+TGG | 0.500980 | 8_4:+35622822 | Msa1324830:CDS |
| TCATTCTTACTATTGATACA+AGG | 0.501239 | 8_4:-35620921 | None:intergenic |
| TGTCAACCTTACAGGTCTCC+TGG | 0.501356 | 8_4:+35622721 | Msa1324830:CDS |
| TGATGAACTTGTGGATCAGT+TGG | 0.502097 | 8_4:+35620773 | Msa1324830:CDS |
| GGCATTCATGACATCAGCTC+CGG | 0.503931 | 8_4:+35622926 | Msa1324830:CDS |
| TGTGAGACACTCTAAGCAAA+TGG | 0.506507 | 8_4:-35620971 | None:intergenic |
| GGGCAAGTTGATTTCTCTCA+AGG | 0.508146 | 8_4:+35622892 | Msa1324830:CDS |
| ATCTTTAATTGTACCAAAGT+CGG | 0.508891 | 8_4:+35620825 | Msa1324830:CDS |
| TGAGGTAGGGAACAGCGAAC+TGG | 0.509919 | 8_4:-35619623 | None:intergenic |
| CTTTCATTTGAAGAGCATCA+AGG | 0.510630 | 8_4:-35622979 | None:intergenic |
| GACTAAAGTTGTTATTCTTG+GGG | 0.515592 | 8_4:+35618719 | Msa1324830:CDS |
| TTGATGCATGGTTTACGCGT+TGG | 0.518670 | 8_4:+35618510 | Msa1324830:CDS |
| AGATTGAAGAGTGAGATTAA+GGG | 0.520090 | 8_4:+35618375 | Msa1324830:CDS |
| TTTCAACATTGGGACTGTAG+TGG | 0.520949 | 8_4:+35622817 | Msa1324830:CDS |
| GTCATTGGAATTCCAAGTCA+AGG | 0.521575 | 8_4:-35620533 | None:intergenic |
| GGCAAGATGACCTGATGTAG+TGG | 0.521630 | 8_4:-35624319 | None:intergenic |
| TTGCTCACGTGGTCTGGCTG+AGG | 0.523673 | 8_4:+35624951 | Msa1324830:CDS |
| ATAATCTTCAATGCATGTGT+TGG | 0.526681 | 8_4:+35624477 | Msa1324830:CDS |
| TTAATCTCACTCTTCAATCT+CGG | 0.530845 | 8_4:-35618372 | None:intergenic |
| GCATGTTCACCATATGTGTA+AGG | 0.532447 | 8_4:-35624894 | None:intergenic |
| AGAGAAATCAACTTGCCCTC+AGG | 0.533509 | 8_4:-35622887 | None:intergenic |
| TGATTCTTCGAGTGTCTGTT+CGG | 0.535338 | 8_4:+35622679 | Msa1324830:CDS |
| AAGAGTGAGATTAAGGGGAA+GGG | 0.536015 | 8_4:+35618381 | Msa1324830:CDS |
| TTGTATTTCATGCAGATGAT+GGG | 0.536621 | 8_4:+35624229 | Msa1324830:intron |
| AACTACGATGTTATTGTGGA+TGG | 0.537067 | 8_4:+35620747 | Msa1324830:CDS |
| TCAGTTCGAAACACTGAGGT+AGG | 0.539334 | 8_4:-35619637 | None:intergenic |
| AGATCTGTCAAACTCATCGT+TGG | 0.539591 | 8_4:-35622114 | None:intergenic |
| TTTAGGTCGAACCCCATCAA+TGG | 0.541044 | 8_4:-35622621 | None:intergenic |
| GTCATCATCATGTTATTGCT+GGG | 0.543230 | 8_4:+35624251 | Msa1324830:CDS |
| CTTGATGCTCTTCAAATGAA+AGG | 0.544723 | 8_4:+35622980 | Msa1324830:CDS |
| TTCTGCTGATATATCGTGTA+CGG | 0.550035 | 8_4:+35622208 | Msa1324830:CDS |
| TTAGCACATATATTCTGCAT+GGG | 0.552113 | 8_4:-35624919 | None:intergenic |
| AAATGAGGATGTGGTTCACC+AGG | 0.552905 | 8_4:+35622250 | Msa1324830:CDS |
| AATGTAACAGAATCAGAAGA+TGG | 0.552950 | 8_4:+35622749 | Msa1324830:CDS |
| CCTATGCATACCTTGCATCA+AGG | 0.557177 | 8_4:-35623235 | None:intergenic |
| GCAAATAGTGCTTCGATGCA+GGG | 0.557206 | 8_4:+35623707 | Msa1324830:CDS |
| CCTGTGATGACGAAGCTGAT+TGG | 0.558218 | 8_4:+35618222 | None:intergenic |
| ACATCCATGCAATGTTTATG+GGG | 0.559604 | 8_4:+35621992 | Msa1324830:CDS |
| TGAAGATTATGTACTTGATG+AGG | 0.561738 | 8_4:-35624464 | None:intergenic |
| ATTGACCAGAAGACTGCAGC+TGG | 0.562024 | 8_4:+35620468 | Msa1324830:CDS |
| CTATTGATACAAGGGTAAAG+AGG | 0.563452 | 8_4:-35620912 | None:intergenic |
| GTCCGCGTTTGGAGAAATTG+GGG | 0.564130 | 8_4:+35618349 | Msa1324830:CDS |
| TTCAAACTGCGTGTTTCCTG+AGG | 0.564587 | 8_4:+35622871 | Msa1324830:CDS |
| TTCTGATGATGCCATTGATG+GGG | 0.565614 | 8_4:+35622610 | Msa1324830:CDS |
| TTGTGGATCCGAAGTTCTCG+TGG | 0.566539 | 8_4:+35618697 | Msa1324830:CDS |
| ATTAAGGGGAAGGGTGAGTG+TGG | 0.566893 | 8_4:+35618390 | Msa1324830:CDS |
| AGGCAACTGGGAAATCAAGC+AGG | 0.567623 | 8_4:-35623667 | None:intergenic |
| CATTCTTACTATTGATACAA+GGG | 0.567794 | 8_4:-35620920 | None:intergenic |
| ATTGGTTTATATAAATAAGG+AGG | 0.568361 | 8_4:+35618278 | Msa1324830:CDS |
| TAAATTCAAAATCTAATGCA+AGG | 0.568983 | 8_4:+35622312 | Msa1324830:CDS |
| AGGCCTCGAAAATGAGGATG+TGG | 0.569242 | 8_4:+35622241 | Msa1324830:CDS |
| GGATGGCATTGATGAACTTG+TGG | 0.569709 | 8_4:+35620764 | Msa1324830:CDS |
| GAAACAACAAGATCTTGGTA+TGG | 0.571403 | 8_4:-35624402 | None:intergenic |
| GTACTTGATGAGGCTTTCGT+CGG | 0.573331 | 8_4:-35624454 | None:intergenic |
| ACTTTAGTCCACGAGAACTT+CGG | 0.575763 | 8_4:-35618705 | None:intergenic |
| TTTATTGTTGGACGGGAAGG+CGG | 0.576313 | 8_4:+35621962 | Msa1324830:CDS |
| AGGTGTTTACATGAAAGGGA+TGG | 0.583463 | 8_4:+35618434 | Msa1324830:CDS |
| AAAGAAGTCTCTTGCTCACG+TGG | 0.583581 | 8_4:+35624940 | Msa1324830:CDS |
| GTAATGTGTTTATACAGTGA+TGG | 0.583836 | 8_4:-35620065 | None:intergenic |
| TTGCTGGGCTAATGCTGAGA+GGG | 0.584157 | 8_4:+35624266 | Msa1324830:CDS |
| ATGCATGTGTTGGAAGAACA+TGG | 0.585347 | 8_4:+35624487 | Msa1324830:CDS |
| GTATTTGACTTTGGATGAGA+CGG | 0.585610 | 8_4:+35618314 | Msa1324830:CDS |
| TCATTGGAATTCCAAGTCAA+GGG | 0.586758 | 8_4:-35620532 | None:intergenic |
| TTGTCCCCATAAACATTGCA+TGG | 0.589544 | 8_4:-35621996 | None:intergenic |
| AGACACTCTAAGCAAATGGT+AGG | 0.589837 | 8_4:-35620967 | None:intergenic |
| ACTCGGGCACCCAGGCAACT+GGG | 0.590499 | 8_4:-35623679 | None:intergenic |
| TGCTAGTGTGATGGATTCAG+AGG | 0.590810 | 8_4:+35624846 | Msa1324830:CDS |
| GGCAAGTTGATTTCTCTCAA+GGG | 0.593759 | 8_4:+35622893 | Msa1324830:CDS |
| GTGTAACTGCAACATTTCAT+CGG | 0.595147 | 8_4:+35623210 | Msa1324830:CDS |
| TCTGCAATTCATGCTCAAGT+GGG | 0.599096 | 8_4:+35622951 | Msa1324830:CDS |
| AGACATGACTTTAATGGCTG+CGG | 0.603063 | 8_4:+35619769 | Msa1324830:CDS |
| ATGTTCAAGTCTTAATAAGG+TGG | 0.607309 | 8_4:-35624292 | None:intergenic |
| CAGTTCGAAACACTGAGGTA+GGG | 0.608254 | 8_4:-35619636 | None:intergenic |
| ATGCAATGTTTATGGGGACA+AGG | 0.608354 | 8_4:+35621998 | Msa1324830:CDS |
| GAATGTAGTTGCTAGTGTGA+TGG | 0.609215 | 8_4:+35624837 | Msa1324830:intron |
| AACACATACACAGTTTCAAG+TGG | 0.611399 | 8_4:-35618780 | None:intergenic |
| ACACATACACAGTTTCAAGT+GGG | 0.613636 | 8_4:-35618779 | None:intergenic |
| TTCATCGGATCCTTGATGCA+AGG | 0.617061 | 8_4:+35623225 | Msa1324830:CDS |
| GAAAATCAATAAATGATCCA+CGG | 0.617225 | 8_4:-35624380 | None:intergenic |
| CTCTAGAACTAAAACAACAA+CGG | 0.617275 | 8_4:-35623816 | None:intergenic |
| CATCTTGTAAATGAGACACC+TGG | 0.617664 | 8_4:+35625107 | Msa1324830:three_prime_UTR |
| TACCTCAGTGTTTCGAACTG+AGG | 0.619362 | 8_4:+35619639 | Msa1324830:CDS |
| TGAAATGTTGCAGTTACACC+AGG | 0.620241 | 8_4:-35623206 | None:intergenic |
| TCAAACTGCGTGTTTCCTGA+GGG | 0.621314 | 8_4:+35622872 | Msa1324830:CDS |
| GACAAACTACGATGTTATTG+TGG | 0.622182 | 8_4:+35620743 | Msa1324830:CDS |
| TTTATTTCGATGAATGACAC+AGG | 0.623869 | 8_4:-35623552 | None:intergenic |
| TCAAATGAAAGGCCTTGTTG+GGG | 0.626483 | 8_4:+35622991 | Msa1324830:CDS |
| CTGCAATTCATGCTCAAGTG+GGG | 0.627478 | 8_4:+35622952 | Msa1324830:CDS |
| TGGAATTCCAAGTCAAGGGA+AGG | 0.630353 | 8_4:-35620528 | None:intergenic |
| CATCAAGACTAGCATTATCG+TGG | 0.630604 | 8_4:+35618746 | Msa1324830:CDS |
| CATCATCAGAAATAAAAGCA+AGG | 0.631404 | 8_4:-35622598 | None:intergenic |
| CAGCTGGTTGATGCTACTGG+TGG | 0.633141 | 8_4:+35620484 | Msa1324830:CDS |
| CTATTATATCTGGCTTGACG+CGG | 0.636088 | 8_4:-35620153 | None:intergenic |
| AGAACTTCATATACATCACC+AGG | 0.645870 | 8_4:-35625125 | None:intergenic |
| AAGAGCGAGTTTCCTCCAAG+AGG | 0.646050 | 8_4:+35622060 | Msa1324830:CDS |
| AACTTCCTTTATCCCCAACA+AGG | 0.646851 | 8_4:-35623003 | None:intergenic |
| GGCCCCAATTTCTCCAAACG+CGG | 0.664398 | 8_4:-35618351 | None:intergenic |
| TATCAGATTCTACATTGACT+AGG | 0.664817 | 8_4:+35625036 | Msa1324830:three_prime_UTR |
| GCAAGATGACCTGATGTAGT+GGG | 0.666471 | 8_4:-35624318 | None:intergenic |
| ATTGCTGGGCTAATGCTGAG+AGG | 0.674984 | 8_4:+35624265 | Msa1324830:CDS |
| TGCGGTAGAGAAATGCATTG+CGG | 0.675702 | 8_4:+35619787 | Msa1324830:CDS |
| GTGTGTAATCTGTTACTGCA+TGG | 0.678138 | 8_4:-35623597 | None:intergenic |
| ACACCAGGTCCGAAACCAGT+CGG | 0.682336 | 8_4:-35623191 | None:intergenic |
| TGGAGTTGGATAATAATGTG+TGG | 0.687498 | 8_4:+35618460 | Msa1324830:CDS |
| CACATACACAGTTTCAAGTG+GGG | 0.690746 | 8_4:-35618778 | None:intergenic |
| AACACGCAGTTTGAACTCTG+AGG | 0.697940 | 8_4:-35622863 | None:intergenic |
| TGCATGTGTTGGAAGAACAT+GGG | 0.707098 | 8_4:+35624488 | Msa1324830:CDS |
| ATCATTTCAAGTGAAGACGT+AGG | 0.743894 | 8_4:+35620192 | Msa1324830:CDS |
| TACCTCAGTTCGAAACACTG+AGG | 0.765004 | 8_4:-35619641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGATTTAATAACAAAAT+AGG | + | chr8_4:35621587-35621606 | Msa1324830:intron | 10.0% |
| !!! | TTATTTTTGTATTTTACAAA+AGG | - | chr8_4:35624555-35624574 | None:intergenic | 10.0% |
| !! | AGATTAAAGTTATATAAAAT+TGG | - | chr8_4:35624600-35624619 | None:intergenic | 10.0% |
| !!! | GAAATTGGTTTATATAAATA+AGG | + | chr8_4:35618275-35618294 | Msa1324830:CDS | 15.0% |
| !!! | AGAACATATTTATTATTTTG+AGG | + | chr8_4:35619890-35619909 | Msa1324830:intron | 15.0% |
| !!! | GAACATATTTATTATTTTGA+GGG | + | chr8_4:35619891-35619910 | Msa1324830:intron | 15.0% |
| !!! | AACATATTTATTATTTTGAG+GGG | + | chr8_4:35619892-35619911 | Msa1324830:intron | 15.0% |
| !!! | TTTCTTTCATCTTTTAAAAA+TGG | + | chr8_4:35620345-35620364 | Msa1324830:intron | 15.0% |
| !!! | TTTTTTTGAACATTAATCTT+AGG | + | chr8_4:35620377-35620396 | Msa1324830:intron | 15.0% |
| !!! | TATTTCAACTTCTATTATTT+TGG | + | chr8_4:35620710-35620729 | Msa1324830:intron | 15.0% |
| !! | TGAAATTATCATAATAAGTT+GGG | - | chr8_4:35621325-35621344 | None:intergenic | 15.0% |
| !! | TTGAAATTATCATAATAAGT+TGG | - | chr8_4:35621326-35621345 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAAAATCATATCC+AGG | - | chr8_4:35621476-35621495 | None:intergenic | 15.0% |
| !!! | TCTTATTAGGTAAATATTTT+TGG | + | chr8_4:35623146-35623165 | Msa1324830:intron | 15.0% |
| !! | CAAAAAAATCAAACAATTTA+TGG | - | chr8_4:35623474-35623493 | None:intergenic | 15.0% |
| !! | TAAATATCCATAGATATATA+GGG | - | chr8_4:35623742-35623761 | None:intergenic | 15.0% |
| !! | ATAAATATCCATAGATATAT+AGG | - | chr8_4:35623743-35623762 | None:intergenic | 15.0% |
| !!! | ATTAAGATTTTTCTTGAATT+TGG | - | chr8_4:35624630-35624649 | None:intergenic | 15.0% |
| !!! | TCTTAATTTGCTTATAAATA+AGG | + | chr8_4:35624643-35624662 | Msa1324830:intron | 15.0% |
| !! | TAGCAAAAAAACATTTAAAA+GGG | - | chr8_4:35624790-35624809 | None:intergenic | 15.0% |
| !! | TTAGCAAAAAAACATTTAAA+AGG | - | chr8_4:35624791-35624810 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTTGCTAATTA+AGG | + | chr8_4:35624794-35624813 | Msa1324830:intron | 15.0% |
| !! | ATTATATACCAATATATAGT+TGG | + | chr8_4:35625066-35625085 | Msa1324830:three_prime_UTR | 15.0% |
| !!! | ATTGGTTTATATAAATAAGG+AGG | + | chr8_4:35618278-35618297 | Msa1324830:CDS | 20.0% |
| !! | AACAAAAGCAAAAAGAATAT+TGG | - | chr8_4:35618810-35618829 | None:intergenic | 20.0% |
| !!! | TAGTTAGTTATTTGTTTTGT+TGG | + | chr8_4:35618870-35618889 | Msa1324830:intron | 20.0% |
| !!! | AAGAAAGAACACTTTTATTA+AGG | - | chr8_4:35619051-35619070 | None:intergenic | 20.0% |
| !! | AATTATCAATTTATCTCTAG+AGG | - | chr8_4:35619223-35619242 | None:intergenic | 20.0% |
| !!! | TTTTATTATTTTTTCTCTGC+AGG | + | chr8_4:35619409-35619428 | Msa1324830:intron | 20.0% |
| !!! | TTTATTATTTTTTCTCTGCA+GGG | + | chr8_4:35619410-35619429 | Msa1324830:intron | 20.0% |
| !!! | TATTTGTTACTAAACATTGA+AGG | + | chr8_4:35619976-35619995 | Msa1324830:intron | 20.0% |
| !! | ATGTGAAAATCACTAATAAA+GGG | - | chr8_4:35620616-35620635 | None:intergenic | 20.0% |
| !! | TATGTGAAAATCACTAATAA+AGG | - | chr8_4:35620617-35620636 | None:intergenic | 20.0% |
| !!! | AGAATTCTCTTATTGTTATT+TGG | + | chr8_4:35621233-35621252 | Msa1324830:intron | 20.0% |
| !! | ATATAATATCTTAAGTGCTT+TGG | + | chr8_4:35621268-35621287 | Msa1324830:intron | 20.0% |
| !! | ATTGACGAATATGATAAATA+CGG | - | chr8_4:35621411-35621430 | None:intergenic | 20.0% |
| !! | ATCAAAAGAGAACAAAAAAT+TGG | + | chr8_4:35622175-35622194 | Msa1324830:CDS | 20.0% |
| !! | TAAATTCAAAATCTAATGCA+AGG | + | chr8_4:35622312-35622331 | Msa1324830:CDS | 20.0% |
| !!! | TGATAGTTTTTTAAAGTATC+AGG | + | chr8_4:35622358-35622377 | Msa1324830:CDS | 20.0% |
| !! | TATAAAGTGAATTAATACTC+AGG | - | chr8_4:35622436-35622455 | None:intergenic | 20.0% |
| !! | CTAATATTTGTTTCAACATT+GGG | + | chr8_4:35622807-35622826 | Msa1324830:CDS | 20.0% |
| !! | TACATAGAGAATATATAAGA+TGG | - | chr8_4:35623080-35623099 | None:intergenic | 20.0% |
| !!! | ATCCAAATTATTTTTGGATA+AGG | - | chr8_4:35623264-35623283 | None:intergenic | 20.0% |
| !!! | AACAAGATCCAAATTATTTT+TGG | - | chr8_4:35623270-35623289 | None:intergenic | 20.0% |
| !!! | TTTTGCAACAAATTTGATTT+TGG | + | chr8_4:35623489-35623508 | Msa1324830:intron | 20.0% |
| !!! | TTTTTTTCCCTATATATCTA+TGG | + | chr8_4:35623732-35623751 | Msa1324830:intron | 20.0% |
| !!! | TAAATTAATTTGTCTGTTTG+TGG | + | chr8_4:35623779-35623798 | Msa1324830:intron | 20.0% |
| !! | AAAGCAAAAATGAATTCTAA+AGG | + | chr8_4:35623863-35623882 | Msa1324830:CDS | 20.0% |
| !! | AAGCAAAAATGAATTCTAAA+GGG | + | chr8_4:35623864-35623883 | Msa1324830:CDS | 20.0% |
| !! | AGCAAAAAAACATTTAAAAG+GGG | - | chr8_4:35624789-35624808 | None:intergenic | 20.0% |
| !!! | TAGTTTTTCCAACTATATAT+TGG | - | chr8_4:35625077-35625096 | None:intergenic | 20.0% |
| !! | TTGTTTGATGTATTTGACTT+TGG | + | chr8_4:35618305-35618324 | Msa1324830:CDS | 25.0% |
| ! | CAATACAACCAAGAATTTAA+TGG | - | chr8_4:35618650-35618669 | None:intergenic | 25.0% |
| !!! | AGAAGTGTTTGAATAAATAG+TGG | + | chr8_4:35618893-35618912 | Msa1324830:intron | 25.0% |
| !! | TGAATAAATAGTGGAATACA+AGG | + | chr8_4:35618902-35618921 | Msa1324830:intron | 25.0% |
| !! | AAGTGTTCTTTCTTTTCTAT+TGG | + | chr8_4:35619057-35619076 | Msa1324830:intron | 25.0% |
| ! | TTTCTGACTTATTACATTTG+TGG | + | chr8_4:35619183-35619202 | Msa1324830:intron | 25.0% |
| ! | ATAATTCATTATAGCAATGC+AGG | + | chr8_4:35619237-35619256 | Msa1324830:intron | 25.0% |
| !! | TCCTTTTAGATCATTCAATT+TGG | + | chr8_4:35619352-35619371 | Msa1324830:intron | 25.0% |
| ! | TCCAAATTGAATGATCTAAA+AGG | - | chr8_4:35619356-35619375 | None:intergenic | 25.0% |
| !! | TTATCTGACAAAGAGATTTT+GGG | + | chr8_4:35619477-35619496 | Msa1324830:CDS | 25.0% |
| ! | AACATGTAATCTACTTTCTT+TGG | + | chr8_4:35619505-35619524 | Msa1324830:intron | 25.0% |
| ! | TATGTTAATAAATTAGCAGC+TGG | + | chr8_4:35619662-35619681 | Msa1324830:intron | 25.0% |
| ! | ATGTTAATAAATTAGCAGCT+GGG | + | chr8_4:35619663-35619682 | Msa1324830:intron | 25.0% |
| !! | TAAATTATCTTGTCTTTTCC+TGG | + | chr8_4:35619943-35619962 | Msa1324830:intron | 25.0% |
| !! | GTGATTTTCACATATTCTTT+AGG | + | chr8_4:35620623-35620642 | Msa1324830:intron | 25.0% |
| !!! | TTCTATTATTTTGGATTTCC+AGG | + | chr8_4:35620719-35620738 | Msa1324830:intron | 25.0% |
| ! | ATCTTTAATTGTACCAAAGT+CGG | + | chr8_4:35620825-35620844 | Msa1324830:CDS | 25.0% |
| ! | CATTCTTACTATTGATACAA+GGG | - | chr8_4:35620923-35620942 | None:intergenic | 25.0% |
| ! | TCATTCTTACTATTGATACA+AGG | - | chr8_4:35620924-35620943 | None:intergenic | 25.0% |
| ! | GTATGTTCTAACTGTATATT+TGG | + | chr8_4:35621014-35621033 | Msa1324830:intron | 25.0% |
| ! | AAAATTTAACCCTGTAAAAG+TGG | - | chr8_4:35621352-35621371 | None:intergenic | 25.0% |
| !!! | TAGCAGGGTTTTATATATTA+TGG | - | chr8_4:35621436-35621455 | None:intergenic | 25.0% |
| !!! | CACATCAACATGTTTTTTAA+TGG | - | chr8_4:35621693-35621712 | None:intergenic | 25.0% |
| ! | ATACTATAAGATCTTTGCAA+CGG | - | chr8_4:35621716-35621735 | None:intergenic | 25.0% |
| !! | ATAGTATAGAAAGTATGTGT+TGG | + | chr8_4:35621729-35621748 | Msa1324830:intron | 25.0% |
| ! | ATGTACTAAAAAATTTGCAC+TGG | + | chr8_4:35621848-35621867 | Msa1324830:intron | 25.0% |
| ! | AAAAGAGAACAAAAAATTGG+AGG | + | chr8_4:35622178-35622197 | Msa1324830:CDS | 25.0% |
| !!! | GCTAAATTTCTTATTGATTC+TGG | + | chr8_4:35622560-35622579 | Msa1324830:CDS | 25.0% |
| !! | TTGATTCTGGAAAACATATA+TGG | + | chr8_4:35622573-35622592 | Msa1324830:CDS | 25.0% |
| ! | GCTAATATTTGTTTCAACAT+TGG | + | chr8_4:35622806-35622825 | Msa1324830:CDS | 25.0% |
| !! | TTTACCTAATAAGAAGTACA+CGG | - | chr8_4:35623140-35623159 | None:intergenic | 25.0% |
| ! | CACCTTATCCAAAAATAATT+TGG | + | chr8_4:35623259-35623278 | Msa1324830:intron | 25.0% |
| ! | TTTAAGGAGAGGAATAATAT+TGG | + | chr8_4:35623306-35623325 | Msa1324830:intron | 25.0% |
| ! | ATACACATGGGAAAATAAAA+GGG | - | chr8_4:35623425-35623444 | None:intergenic | 25.0% |
| ! | TATACACATGGGAAAATAAA+AGG | - | chr8_4:35623426-35623445 | None:intergenic | 25.0% |
| ! | TTCATGTTCAAGTCTTAATA+AGG | - | chr8_4:35624298-35624317 | None:intergenic | 25.0% |
| ! | GAAAATCAATAAATGATCCA+CGG | - | chr8_4:35624383-35624402 | None:intergenic | 25.0% |
| !!! | ATTTTTCTTGAATTTGGCTT+GGG | - | chr8_4:35624624-35624643 | None:intergenic | 25.0% |
| ! | GAATACTTTACATTCCAATT+TGG | + | chr8_4:35624665-35624684 | Msa1324830:intron | 25.0% |
| !! | ATTTTGTACAATAACAGACA+GGG | - | chr8_4:35624725-35624744 | None:intergenic | 25.0% |
| !!! | ACATCTTCAGTCATTTTATT+TGG | + | chr8_4:35624763-35624782 | Msa1324830:intron | 25.0% |
| !!! | TGGTAATCGTATTGTTGTTT+TGG | + | chr8_4:35618242-35618261 | Msa1324830:CDS | 30.0% |
| !!! | GGTAATCGTATTGTTGTTTT+GGG | + | chr8_4:35618243-35618262 | Msa1324830:CDS | 30.0% |
| ! | TTTGGGTTTGAAGAAGAAAT+TGG | + | chr8_4:35618260-35618279 | Msa1324830:CDS | 30.0% |
| TTAATCTCACTCTTCAATCT+CGG | - | chr8_4:35618375-35618394 | None:intergenic | 30.0% | |
| AGATTGAAGAGTGAGATTAA+GGG | + | chr8_4:35618375-35618394 | Msa1324830:CDS | 30.0% | |
| TGTTATACTGGTGTAATTAG+AGG | + | chr8_4:35618414-35618433 | Msa1324830:CDS | 30.0% | |
| !! | ATTAGAGGTGTTTACATGAA+AGG | + | chr8_4:35618429-35618448 | Msa1324830:CDS | 30.0% |
| !! | TTAGAGGTGTTTACATGAAA+GGG | + | chr8_4:35618430-35618449 | Msa1324830:CDS | 30.0% |
| ! | TAATGTGTGGCTTCTTTTAA+CGG | + | chr8_4:35618473-35618492 | Msa1324830:CDS | 30.0% |
| CGAATTTACTTCACTTACAA+TGG | - | chr8_4:35618538-35618557 | None:intergenic | 30.0% | |
| GAGCTTTACCATTAAATTCT+TGG | + | chr8_4:35618639-35618658 | Msa1324830:intron | 30.0% | |
| ! | TGTGAGAAATGTTCATTTTG+TGG | + | chr8_4:35618680-35618699 | Msa1324830:CDS | 30.0% |
| ! | TGGACTAAAGTTGTTATTCT+TGG | + | chr8_4:35618717-35618736 | Msa1324830:CDS | 30.0% |
| ! | GGACTAAAGTTGTTATTCTT+GGG | + | chr8_4:35618718-35618737 | Msa1324830:CDS | 30.0% |
| ! | GACTAAAGTTGTTATTCTTG+GGG | + | chr8_4:35618719-35618738 | Msa1324830:CDS | 30.0% |
| TGTGAAAAGAATAGTGACTA+TGG | + | chr8_4:35618975-35618994 | Msa1324830:intron | 30.0% | |
| GAATACAACAAATCAGAACA+TGG | - | chr8_4:35619123-35619142 | None:intergenic | 30.0% | |
| CATTAATATCATCACTTGCA+AGG | - | chr8_4:35619145-35619164 | None:intergenic | 30.0% | |
| ! | CTTATCTGACAAAGAGATTT+TGG | + | chr8_4:35619476-35619495 | Msa1324830:CDS | 30.0% |
| ATCTACTTTCTTTGGATTCA+AGG | + | chr8_4:35619513-35619532 | Msa1324830:intron | 30.0% | |
| ATAAGAATTGAGATAGAACC+AGG | - | chr8_4:35619552-35619571 | None:intergenic | 30.0% | |
| ACCAAATTCTCCATATAGTT+TGG | + | chr8_4:35619700-35619719 | Msa1324830:intron | 30.0% | |
| ACCAAACTATATGGAGAATT+TGG | - | chr8_4:35619704-35619723 | None:intergenic | 30.0% | |
| AGCATTACAACCAAACTATA+TGG | - | chr8_4:35619713-35619732 | None:intergenic | 30.0% | |
| ! | TTGGTTGTAATGCTTTCTTT+TGG | + | chr8_4:35619719-35619738 | Msa1324830:intron | 30.0% |
| ACAAGTAAAATACCAGTTTC+AGG | - | chr8_4:35619816-35619835 | None:intergenic | 30.0% | |
| !! | ACTATCTCTGATGTTTTTAC+AGG | + | chr8_4:35620020-35620039 | Msa1324830:intron | 30.0% |
| GTAATGTGTTTATACAGTGA+TGG | - | chr8_4:35620068-35620087 | None:intergenic | 30.0% | |
| CAGTGTAAATTATTGTCTGT+TGG | + | chr8_4:35620111-35620130 | Msa1324830:CDS | 30.0% | |
| ACCTGATCTACTATTATATC+TGG | - | chr8_4:35620166-35620185 | None:intergenic | 30.0% | |
| ! | TGTTTTGCATGGATATCTAA+AGG | + | chr8_4:35620218-35620237 | Msa1324830:CDS | 30.0% |
| ! | TGAGTATTTAAAGCAAGATC+AGG | - | chr8_4:35620439-35620458 | None:intergenic | 30.0% |
| GAATTCCAATGACATATTTG+AGG | + | chr8_4:35620543-35620562 | Msa1324830:CDS | 30.0% | |
| TTTGACCTCAAATATGTCAT+TGG | - | chr8_4:35620551-35620570 | None:intergenic | 30.0% | |
| AAAGGGTCACAAGATAAAAA+GGG | - | chr8_4:35620599-35620618 | None:intergenic | 30.0% | |
| TAAAGGGTCACAAGATAAAA+AGG | - | chr8_4:35620600-35620619 | None:intergenic | 30.0% | |
| AGGACATATTATAACTTTGC+TGG | - | chr8_4:35620680-35620699 | None:intergenic | 30.0% | |
| AGTTGAAATACAAACTTCTG+AGG | - | chr8_4:35620700-35620719 | None:intergenic | 30.0% | |
| ! | AACATACCTTTTCTTGCAAA+GGG | - | chr8_4:35621001-35621020 | None:intergenic | 30.0% |
| ATTTGGTCAGAAATTGCAAT+CGG | + | chr8_4:35621031-35621050 | Msa1324830:intron | 30.0% | |
| !! | TTCTCTTATTGTTATTTGGC+TGG | + | chr8_4:35621237-35621256 | Msa1324830:intron | 30.0% |
| !! | ATTTCAACATCCACTTTTAC+AGG | + | chr8_4:35621339-35621358 | Msa1324830:intron | 30.0% |
| !! | TTTCAACATCCACTTTTACA+GGG | + | chr8_4:35621340-35621359 | Msa1324830:intron | 30.0% |
| TGTTAATAAGATACCTGTAG+AGG | + | chr8_4:35621374-35621393 | Msa1324830:intron | 30.0% | |
| TAAATCATATTGTCCGCATA+AGG | - | chr8_4:35621577-35621596 | None:intergenic | 30.0% | |
| CAATGTCTAGAGACATAAAT+AGG | + | chr8_4:35621630-35621649 | Msa1324830:intron | 30.0% | |
| ACTCTATAGCACTTTACAAT+GGG | - | chr8_4:35621790-35621809 | None:intergenic | 30.0% | |
| TACTCTATAGCACTTTACAA+TGG | - | chr8_4:35621791-35621810 | None:intergenic | 30.0% | |
| TACTGCAATTAGTGAGATAA+GGG | - | chr8_4:35621879-35621898 | None:intergenic | 30.0% | |
| ATACTGCAATTAGTGAGATA+AGG | - | chr8_4:35621880-35621899 | None:intergenic | 30.0% | |
| !! | AACAAAAGTACTTGACTTGT+TGG | - | chr8_4:35621919-35621938 | None:intergenic | 30.0% |
| ! | GTTGCCTTACATTTTATTGT+TGG | + | chr8_4:35621950-35621969 | Msa1324830:CDS | 30.0% |
| ! | CCTTACATTTTATTGTTGGA+CGG | + | chr8_4:35621954-35621973 | Msa1324830:CDS | 30.0% |
| ! | CTTACATTTTATTGTTGGAC+GGG | + | chr8_4:35621955-35621974 | Msa1324830:CDS | 30.0% |
| TTACATCCATGCAATGTTTA+TGG | + | chr8_4:35621990-35622009 | Msa1324830:CDS | 30.0% | |
| TACATCCATGCAATGTTTAT+GGG | + | chr8_4:35621991-35622010 | Msa1324830:CDS | 30.0% | |
| TGCTTGCTCTAATACATTTA+CGG | + | chr8_4:35622151-35622170 | Msa1324830:CDS | 30.0% | |
| TTTAGATGCGTATCTTTACT+AGG | - | chr8_4:35622296-35622315 | None:intergenic | 30.0% | |
| ! | TCTTTTCAGTTGTTGCATAT+TGG | + | chr8_4:35622458-35622477 | Msa1324830:intron | 30.0% |
| CATCATCAGAAATAAAAGCA+AGG | - | chr8_4:35622601-35622620 | None:intergenic | 30.0% | |
| TGCTGTTGAATTTGAACTTT+AGG | - | chr8_4:35622641-35622660 | None:intergenic | 30.0% | |
| ATTCTGTTACATTATCTTCC+AGG | - | chr8_4:35622742-35622761 | None:intergenic | 30.0% | |
| AATGTAACAGAATCAGAAGA+TGG | + | chr8_4:35622749-35622768 | Msa1324830:CDS | 30.0% | |
| ! | ATTTTCCCATGTGTATATGA+AGG | + | chr8_4:35623429-35623448 | Msa1324830:intron | 30.0% |
| ! | AGGCAGTAACATCAATTTTT+GGG | - | chr8_4:35623535-35623554 | None:intergenic | 30.0% |
| TTTATTTCGATGAATGACAC+AGG | - | chr8_4:35623555-35623574 | None:intergenic | 30.0% | |
| ! | ACACTATATGCATCTTTTAG+AGG | - | chr8_4:35623630-35623649 | None:intergenic | 30.0% |
| TATGGATATTTATGCTCTCA+AGG | + | chr8_4:35623750-35623769 | Msa1324830:intron | 30.0% | |
| !! | CTCTAGAACTAAAACAACAA+CGG | - | chr8_4:35623819-35623838 | None:intergenic | 30.0% |
| !!! | TTGTTGTTTTAGTTCTAGAG+AGG | + | chr8_4:35623819-35623838 | Msa1324830:CDS | 30.0% |
| !! | GAATTCTAAAGGGATTCTTT+TGG | + | chr8_4:35623874-35623893 | Msa1324830:CDS | 30.0% |
| !! | GTAGTTAGTTGATTAGTTTG+AGG | - | chr8_4:35624178-35624197 | None:intergenic | 30.0% |
| TCTGCATGAAATACAATGTT+AGG | - | chr8_4:35624225-35624244 | None:intergenic | 30.0% | |
| ATTGTATTTCATGCAGATGA+TGG | + | chr8_4:35624228-35624247 | Msa1324830:intron | 30.0% | |
| TTGTATTTCATGCAGATGAT+GGG | + | chr8_4:35624229-35624248 | Msa1324830:intron | 30.0% | |
| ATGTTCAAGTCTTAATAAGG+TGG | - | chr8_4:35624295-35624314 | None:intergenic | 30.0% | |
| CTTGTACTTCTTCAAAATTC+TGG | - | chr8_4:35624343-35624362 | None:intergenic | 30.0% | |
| TGAAGATTATGTACTTGATG+AGG | - | chr8_4:35624467-35624486 | None:intergenic | 30.0% | |
| ATAATCTTCAATGCATGTGT+TGG | + | chr8_4:35624477-35624496 | Msa1324830:CDS | 30.0% | |
| ! | GATTTTTCTTGAATTTGGCT+TGG | - | chr8_4:35624625-35624644 | None:intergenic | 30.0% |
| CATAGAAAGTCATACCAAAT+TGG | - | chr8_4:35624682-35624701 | None:intergenic | 30.0% | |
| ! | GATTTTGTACAATAACAGAC+AGG | - | chr8_4:35624726-35624745 | None:intergenic | 30.0% |
| AAATGACTGAAGATGTAAGA+TGG | - | chr8_4:35624759-35624778 | None:intergenic | 30.0% | |
| GAATGAATACCTTACACATA+TGG | + | chr8_4:35624885-35624904 | Msa1324830:CDS | 30.0% | |
| TTAGCACATATATTCTGCAT+GGG | - | chr8_4:35624922-35624941 | None:intergenic | 30.0% | |
| TTTAGCACATATATTCTGCA+TGG | - | chr8_4:35624923-35624942 | None:intergenic | 30.0% | |
| GTCATTCACAATTTGATCAT+AGG | - | chr8_4:35625014-35625033 | None:intergenic | 30.0% | |
| AGTCAATGTAGAATCTGATA+TGG | - | chr8_4:35625036-35625055 | None:intergenic | 30.0% | |
| ! | TATCAGATTCTACATTGACT+AGG | + | chr8_4:35625036-35625055 | Msa1324830:three_prime_UTR | 30.0% |
| ! | GTATTTGACTTTGGATGAGA+CGG | + | chr8_4:35618314-35618333 | Msa1324830:CDS | 35.0% |
| GAGATTGAAGAGTGAGATTA+AGG | + | chr8_4:35618374-35618393 | Msa1324830:CDS | 35.0% | |
| GATTGAAGAGTGAGATTAAG+GGG | + | chr8_4:35618376-35618395 | Msa1324830:CDS | 35.0% | |
| TGGAGTTGGATAATAATGTG+TGG | + | chr8_4:35618460-35618479 | Msa1324830:CDS | 35.0% | |
| CAACTACATACTTTGATGCA+TGG | + | chr8_4:35618498-35618517 | Msa1324830:CDS | 35.0% | |
| ! | ACACATACACAGTTTCAAGT+GGG | - | chr8_4:35618782-35618801 | None:intergenic | 35.0% |
| AACACATACACAGTTTCAAG+TGG | - | chr8_4:35618783-35618802 | None:intergenic | 35.0% | |
| TGGAATACAAGGATAATGAG+AGG | + | chr8_4:35618913-35618932 | Msa1324830:intron | 35.0% | |
| AAGAATAGTGACTATGGTGA+AGG | + | chr8_4:35618981-35619000 | Msa1324830:intron | 35.0% | |
| AGAATAGTGACTATGGTGAA+GGG | + | chr8_4:35618982-35619001 | Msa1324830:intron | 35.0% | |
| TTAGTTGCAGTTGTTTACGT+TGG | - | chr8_4:35619084-35619103 | None:intergenic | 35.0% | |
| AACTTCCGTAAAAAGTTTGC+TGG | + | chr8_4:35619450-35619469 | Msa1324830:CDS | 35.0% | |
| ! | AGCTACCAGCAAACTTTTTA+CGG | - | chr8_4:35619458-35619477 | None:intergenic | 35.0% |
| ! | TCTTATCAGTTGTTGTTGCA+AGG | + | chr8_4:35619566-35619585 | Msa1324830:intron | 35.0% |
| ! | CAAGGTTTTTCCAGAATGAA+GGG | + | chr8_4:35619584-35619603 | Msa1324830:intron | 35.0% |
| CTGTGTAGACATGACTTTAA+TGG | + | chr8_4:35619763-35619782 | Msa1324830:CDS | 35.0% | |
| ! | ATTATCTTGTCTTTTCCTGG+CGG | + | chr8_4:35619946-35619965 | Msa1324830:intron | 35.0% |
| GCCAGATATAATAGTAGATC+AGG | + | chr8_4:35620162-35620181 | Msa1324830:CDS | 35.0% | |
| ! | ATCATTTCAAGTGAAGACGT+AGG | + | chr8_4:35620192-35620211 | Msa1324830:CDS | 35.0% |
| ! | ATGTAAACTGCATTTTGCGA+TGG | + | chr8_4:35620277-35620296 | Msa1324830:intron | 35.0% |
| ! | CTGTTTTGTACGTTGTAATG+TGG | + | chr8_4:35620311-35620330 | Msa1324830:intron | 35.0% |
| TCATTGGAATTCCAAGTCAA+GGG | - | chr8_4:35620535-35620554 | None:intergenic | 35.0% | |
| GATAAAAAGGGAAGGTAATG+TGG | - | chr8_4:35620587-35620606 | None:intergenic | 35.0% | |
| GACAAACTACGATGTTATTG+TGG | + | chr8_4:35620743-35620762 | Msa1324830:CDS | 35.0% | |
| AACTACGATGTTATTGTGGA+TGG | + | chr8_4:35620747-35620766 | Msa1324830:CDS | 35.0% | |
| CGATTTCTGTTTACTGTCTT+TGG | + | chr8_4:35620865-35620884 | Msa1324830:CDS | 35.0% | |
| CTATTGATACAAGGGTAAAG+AGG | - | chr8_4:35620915-35620934 | None:intergenic | 35.0% | |
| GAAGCTAAGATACTTGAATC+TGG | + | chr8_4:35620942-35620961 | Msa1324830:CDS | 35.0% | |
| CAAATTCCCTTTGCAAGAAA+AGG | + | chr8_4:35620992-35621011 | Msa1324830:CDS | 35.0% | |
| ! | GAACATACCTTTTCTTGCAA+AGG | - | chr8_4:35621002-35621021 | None:intergenic | 35.0% |
| GGTTAACACTATCAATTGCA+TGG | - | chr8_4:35621176-35621195 | None:intergenic | 35.0% | |
| AAGCATGATTGAAAGTCCAT+CGG | + | chr8_4:35621508-35621527 | Msa1324830:intron | 35.0% | |
| !! | ATACTGACTCAAACCTTATG+CGG | + | chr8_4:35621561-35621580 | Msa1324830:intron | 35.0% |
| CCGTCCAACAATAAAATGTA+AGG | - | chr8_4:35621957-35621976 | None:intergenic | 35.0% | |
| ACATCCATGCAATGTTTATG+GGG | + | chr8_4:35621992-35622011 | Msa1324830:CDS | 35.0% | |
| !! | TCTCTTTAACTTGCTTACCT+AGG | + | chr8_4:35622389-35622408 | Msa1324830:intron | 35.0% |
| TTTCAGTTGTTGCATATTGG+TGG | + | chr8_4:35622461-35622480 | Msa1324830:intron | 35.0% | |
| ! | ATTTCTGATGATGCCATTGA+TGG | + | chr8_4:35622608-35622627 | Msa1324830:CDS | 35.0% |
| ! | TTTCTGATGATGCCATTGAT+GGG | + | chr8_4:35622609-35622628 | Msa1324830:CDS | 35.0% |
| TGAGGCTCAGAACAAAAATT+AGG | - | chr8_4:35622848-35622867 | None:intergenic | 35.0% | |
| !! | CTTTCATTTGAAGAGCATCA+AGG | - | chr8_4:35622982-35623001 | None:intergenic | 35.0% |
| CTTGATGCTCTTCAAATGAA+AGG | + | chr8_4:35622980-35622999 | Msa1324830:CDS | 35.0% | |
| !! | TTCAAATGAAAGGCCTTGTT+GGG | + | chr8_4:35622990-35623009 | Msa1324830:CDS | 35.0% |
| GTGTAACTGCAACATTTCAT+CGG | + | chr8_4:35623210-35623229 | Msa1324830:CDS | 35.0% | |
| TGAGTCCTTCATATACACAT+GGG | - | chr8_4:35623437-35623456 | None:intergenic | 35.0% | |
| ATGAGTCCTTCATATACACA+TGG | - | chr8_4:35623438-35623457 | None:intergenic | 35.0% | |
| CAAACAATTTATGGTACCAC+TGG | - | chr8_4:35623465-35623484 | None:intergenic | 35.0% | |
| !!! | TTGGATTTTGATTCTTCTGC+AGG | + | chr8_4:35623508-35623527 | Msa1324830:intron | 35.0% |
| !!! | TGGATTTTGATTCTTCTGCA+GGG | + | chr8_4:35623509-35623528 | Msa1324830:intron | 35.0% |
| ! | CAGGCAGTAACATCAATTTT+TGG | - | chr8_4:35623536-35623555 | None:intergenic | 35.0% |
| !! | AGCACTATTTGCTTTTGACT+CGG | - | chr8_4:35623699-35623718 | None:intergenic | 35.0% |
| !!! | TCCACTTGCTTGTTTTTTGT+TGG | + | chr8_4:35623901-35623920 | Msa1324830:CDS | 35.0% |
| !!! | CCACTTGCTTGTTTTTTGTT+GGG | + | chr8_4:35623902-35623921 | Msa1324830:CDS | 35.0% |
| TCTCTCGACATGTTACTAAA+TGG | + | chr8_4:35623951-35623970 | Msa1324830:intron | 35.0% | |
| GCAGTGCTCTATTATAGAAA+GGG | - | chr8_4:35624123-35624142 | None:intergenic | 35.0% | |
| GTCATCATCATGTTATTGCT+GGG | + | chr8_4:35624251-35624270 | Msa1324830:CDS | 35.0% | |
| AGAATTACTGTGAAAAACCG+TGG | + | chr8_4:35624363-35624382 | Msa1324830:CDS | 35.0% | |
| GAAACAACAAGATCTTGGTA+TGG | - | chr8_4:35624405-35624424 | None:intergenic | 35.0% | |
| !! | TACCAAGATCTTGTTGTTTC+TGG | + | chr8_4:35624405-35624424 | Msa1324830:CDS | 35.0% |
| AGAACTTCATATACATCACC+AGG | - | chr8_4:35625128-35625147 | None:intergenic | 35.0% | |
| AAGAGTGAGATTAAGGGGAA+GGG | + | chr8_4:35618381-35618400 | Msa1324830:CDS | 40.0% | |
| AGGTGTTTACATGAAAGGGA+TGG | + | chr8_4:35618434-35618453 | Msa1324830:CDS | 40.0% | |
| TTACATGAAAGGGATGGCTT+TGG | + | chr8_4:35618440-35618459 | Msa1324830:CDS | 40.0% | |
| ACTTTAGTCCACGAGAACTT+CGG | - | chr8_4:35618708-35618727 | None:intergenic | 40.0% | |
| CATCAAGACTAGCATTATCG+TGG | + | chr8_4:35618746-35618765 | Msa1324830:CDS | 40.0% | |
| ! | CACATACACAGTTTCAAGTG+GGG | - | chr8_4:35618781-35618800 | None:intergenic | 40.0% |
| GAATAGTGACTATGGTGAAG+GGG | + | chr8_4:35618983-35619002 | Msa1324830:intron | 40.0% | |
| ! | TACCATTTTCAGCAAGACTC+TGG | + | chr8_4:35619312-35619331 | Msa1324830:CDS | 40.0% |
| TACCAGAGTCTTGCTGAAAA+TGG | - | chr8_4:35619317-35619336 | None:intergenic | 40.0% | |
| ! | GCAAGGTTTTTCCAGAATGA+AGG | + | chr8_4:35619583-35619602 | Msa1324830:intron | 40.0% |
| AGACATGACTTTAATGGCTG+CGG | + | chr8_4:35619769-35619788 | Msa1324830:CDS | 40.0% | |
| AACAAATAATACCTTCCGCC+AGG | - | chr8_4:35619964-35619983 | None:intergenic | 40.0% | |
| ! | CTATTATATCTGGCTTGACG+CGG | - | chr8_4:35620156-35620175 | None:intergenic | 40.0% |
| !!! | GCATTTTGCGATGGCTTTAT+TGG | + | chr8_4:35620286-35620305 | Msa1324830:intron | 40.0% |
| GTCATTGGAATTCCAAGTCA+AGG | - | chr8_4:35620536-35620555 | None:intergenic | 40.0% | |
| GGTCACAAGATAAAAAGGGA+AGG | - | chr8_4:35620595-35620614 | None:intergenic | 40.0% | |
| ACCATTACCAAAGTCATCTG+CGG | - | chr8_4:35620649-35620668 | None:intergenic | 40.0% | |
| ! | TAACATCGTAGTTTGTCACC+TGG | - | chr8_4:35620740-35620759 | None:intergenic | 40.0% |
| TGATGAACTTGTGGATCAGT+TGG | + | chr8_4:35620773-35620792 | Msa1324830:CDS | 40.0% | |
| AGACACTCTAAGCAAATGGT+AGG | - | chr8_4:35620970-35620989 | None:intergenic | 40.0% | |
| TGTGAGACACTCTAAGCAAA+TGG | - | chr8_4:35620974-35620993 | None:intergenic | 40.0% | |
| ! | GCAGGATATCTATTCTGAGA+GGG | - | chr8_4:35621197-35621216 | None:intergenic | 40.0% |
| TGCAGGATATCTATTCTGAG+AGG | - | chr8_4:35621198-35621217 | None:intergenic | 40.0% | |
| CTTGAGAAACTAAAGCTTGC+AGG | - | chr8_4:35621215-35621234 | None:intergenic | 40.0% | |
| !! | CTTATTGTTATTTGGCTGGC+TGG | + | chr8_4:35621241-35621260 | Msa1324830:intron | 40.0% |
| AAACCCTGCTATAAGCTGTT+AGG | + | chr8_4:35621445-35621464 | Msa1324830:intron | 40.0% | |
| ! | CATTTTATTGTTGGACGGGA+AGG | + | chr8_4:35621959-35621978 | Msa1324830:CDS | 40.0% |
| TTGTCCCCATAAACATTGCA+TGG | - | chr8_4:35621999-35622018 | None:intergenic | 40.0% | |
| ATGCAATGTTTATGGGGACA+AGG | + | chr8_4:35621998-35622017 | Msa1324830:CDS | 40.0% | |
| CTTAACAAGTTTCTGCCTCT+TGG | - | chr8_4:35622078-35622097 | None:intergenic | 40.0% | |
| AGATCTGTCAAACTCATCGT+TGG | - | chr8_4:35622117-35622136 | None:intergenic | 40.0% | |
| !! | TTTTAGAGGCCTCGAAAATG+AGG | + | chr8_4:35622235-35622254 | Msa1324830:CDS | 40.0% |
| ! | TTCTGATGATGCCATTGATG+GGG | + | chr8_4:35622610-35622629 | Msa1324830:CDS | 40.0% |
| GACACTCGAAGAATCATCAT+TGG | - | chr8_4:35622675-35622694 | None:intergenic | 40.0% | |
| TGATTCTTCGAGTGTCTGTT+CGG | + | chr8_4:35622679-35622698 | Msa1324830:CDS | 40.0% | |
| TATCTACCTGTCAACCTTAC+AGG | + | chr8_4:35622713-35622732 | Msa1324830:CDS | 40.0% | |
| TTTCAACATTGGGACTGTAG+TGG | + | chr8_4:35622817-35622836 | Msa1324830:CDS | 40.0% | |
| !! | GGCAAGTTGATTTCTCTCAA+GGG | + | chr8_4:35622893-35622912 | Msa1324830:CDS | 40.0% |
| TCTCTCAAGGGAAATGTAGT+TGG | + | chr8_4:35622905-35622924 | Msa1324830:CDS | 40.0% | |
| TGAGCATGAATTGCAGAAAC+CGG | - | chr8_4:35622948-35622967 | None:intergenic | 40.0% | |
| TTCTGCAATTCATGCTCAAG+TGG | + | chr8_4:35622950-35622969 | Msa1324830:CDS | 40.0% | |
| TCTGCAATTCATGCTCAAGT+GGG | + | chr8_4:35622951-35622970 | Msa1324830:CDS | 40.0% | |
| ! | CTTCAAATGAAAGGCCTTGT+TGG | + | chr8_4:35622989-35623008 | Msa1324830:CDS | 40.0% |
| !! | TCAAATGAAAGGCCTTGTTG+GGG | + | chr8_4:35622991-35623010 | Msa1324830:CDS | 40.0% |
| AACTTCCTTTATCCCCAACA+AGG | - | chr8_4:35623006-35623025 | None:intergenic | 40.0% | |
| CATGCCGTGTACTTCTTATT+AGG | + | chr8_4:35623133-35623152 | Msa1324830:intron | 40.0% | |
| ! | AGTAAACATGCTTTTCCGAC+TGG | + | chr8_4:35623176-35623195 | Msa1324830:CDS | 40.0% |
| TGAAATGTTGCAGTTACACC+AGG | - | chr8_4:35623209-35623228 | None:intergenic | 40.0% | |
| ! | CTTGTTTCCCTGCACTTTTA+AGG | + | chr8_4:35623290-35623309 | Msa1324830:intron | 40.0% |
| ! | TTCCTCTCCTTAAAAGTGCA+GGG | - | chr8_4:35623300-35623319 | None:intergenic | 40.0% |
| ! | ATTCCTCTCCTTAAAAGTGC+AGG | - | chr8_4:35623301-35623320 | None:intergenic | 40.0% |
| CAATTTATGGTACCACTGGA+AGG | - | chr8_4:35623461-35623480 | None:intergenic | 40.0% | |
| GTGTGTAATCTGTTACTGCA+TGG | - | chr8_4:35623600-35623619 | None:intergenic | 40.0% | |
| AGATGCATATAGTGTGTCTC+AGG | + | chr8_4:35623635-35623654 | Msa1324830:CDS | 40.0% | |
| !! | GCACTATTTGCTTTTGACTC+GGG | - | chr8_4:35623698-35623717 | None:intergenic | 40.0% |
| TTTGTCTGTTTGTGGTGATC+AGG | + | chr8_4:35623787-35623806 | Msa1324830:intron | 40.0% | |
| CCCAACAAAAAACAAGCAAG+TGG | - | chr8_4:35623905-35623924 | None:intergenic | 40.0% | |
| CTACAGACTACAGTACATAC+AGG | - | chr8_4:35624017-35624036 | None:intergenic | 40.0% | |
| CTGTATGTACTGTAGTCTGT+AGG | + | chr8_4:35624015-35624034 | Msa1324830:intron | 40.0% | |
| TGTAGTCTGTAGGTCAAATG+TGG | + | chr8_4:35624025-35624044 | Msa1324830:intron | 40.0% | |
| TATAGAAAGGGAAACCCTTG+AGG | - | chr8_4:35624111-35624130 | None:intergenic | 40.0% | |
| CGCAGTGCTCTATTATAGAA+AGG | - | chr8_4:35624124-35624143 | None:intergenic | 40.0% | |
| GGTCATCATCATGTTATTGC+TGG | + | chr8_4:35624250-35624269 | Msa1324830:CDS | 40.0% | |
| CACCAGAAACAACAAGATCT+TGG | - | chr8_4:35624410-35624429 | None:intergenic | 40.0% | |
| ATGCATGTGTTGGAAGAACA+TGG | + | chr8_4:35624487-35624506 | Msa1324830:CDS | 40.0% | |
| TGCATGTGTTGGAAGAACAT+GGG | + | chr8_4:35624488-35624507 | Msa1324830:CDS | 40.0% | |
| ATGGGTGAGTTTATCAGACA+TGG | + | chr8_4:35624506-35624525 | Msa1324830:intron | 40.0% | |
| TACAATAACAGACAGGGAAC+AGG | - | chr8_4:35624719-35624738 | None:intergenic | 40.0% | |
| GAATGTAGTTGCTAGTGTGA+TGG | + | chr8_4:35624837-35624856 | Msa1324830:intron | 40.0% | |
| GCATGTTCACCATATGTGTA+AGG | - | chr8_4:35624897-35624916 | None:intergenic | 40.0% | |
| CATCTTGTAAATGAGACACC+TGG | + | chr8_4:35625107-35625126 | Msa1324830:three_prime_UTR | 40.0% | |
| TTTGCATGTTTGTCCGCGTT+TGG | + | chr8_4:35618338-35618357 | Msa1324830:CDS | 45.0% | |
| TTGTCCGCGTTTGGAGAAAT+TGG | + | chr8_4:35618347-35618366 | Msa1324830:CDS | 45.0% | |
| TGTCCGCGTTTGGAGAAATT+GGG | + | chr8_4:35618348-35618367 | Msa1324830:CDS | 45.0% | |
| GAAGAGTGAGATTAAGGGGA+AGG | + | chr8_4:35618380-35618399 | Msa1324830:CDS | 45.0% | |
| GGTGAGTGTGGTTGTTATAC+TGG | + | chr8_4:35618402-35618421 | Msa1324830:CDS | 45.0% | |
| TTGATGCATGGTTTACGCGT+TGG | + | chr8_4:35618510-35618529 | Msa1324830:CDS | 45.0% | |
| GAGAGAAATCTCTCCTCCAA+GGG | - | chr8_4:35619012-35619031 | None:intergenic | 45.0% | |
| AGAGAGAAATCTCTCCTCCA+AGG | - | chr8_4:35619013-35619032 | None:intergenic | 45.0% | |
| !! | CAAGGATTTCTTAGCTTGCC+TGG | + | chr8_4:35619531-35619550 | Msa1324830:intron | 45.0% |
| CAGTTCGAAACACTGAGGTA+GGG | - | chr8_4:35619639-35619658 | None:intergenic | 45.0% | |
| TCAGTTCGAAACACTGAGGT+AGG | - | chr8_4:35619640-35619659 | None:intergenic | 45.0% | |
| TACCTCAGTGTTTCGAACTG+AGG | + | chr8_4:35619639-35619658 | Msa1324830:CDS | 45.0% | |
| TACCTCAGTTCGAAACACTG+AGG | - | chr8_4:35619644-35619663 | None:intergenic | 45.0% | |
| ! | AATGCTTTCTTTTGGCAGCG+TGG | + | chr8_4:35619727-35619746 | Msa1324830:intron | 45.0% |
| TGCGGTAGAGAAATGCATTG+CGG | + | chr8_4:35619787-35619806 | Msa1324830:CDS | 45.0% | |
| TGGAATTCCAAGTCAAGGGA+AGG | - | chr8_4:35620531-35620550 | None:intergenic | 45.0% | |
| !! | GGATGGCATTGATGAACTTG+TGG | + | chr8_4:35620764-35620783 | Msa1324830:CDS | 45.0% |
| GCTAAATCGTCTTCCGACTT+TGG | - | chr8_4:35620841-35620860 | None:intergenic | 45.0% | |
| GGTACTTCATCTTCCTCTAC+AGG | - | chr8_4:35621390-35621409 | None:intergenic | 45.0% | |
| TCGCCTAACAGCTTATAGCA+GGG | - | chr8_4:35621451-35621470 | None:intergenic | 45.0% | |
| ATCGCCTAACAGCTTATAGC+AGG | - | chr8_4:35621452-35621471 | None:intergenic | 45.0% | |
| ! | CATGTTTCAAGTGAAGCCGA+TGG | - | chr8_4:35621527-35621546 | None:intergenic | 45.0% |
| !! | CATCGGCTTCACTTGAAACA+TGG | + | chr8_4:35621525-35621544 | Msa1324830:intron | 45.0% |
| TTTATTGTTGGACGGGAAGG+CGG | + | chr8_4:35621962-35621981 | Msa1324830:CDS | 45.0% | |
| AACAAGTTTCTGCCTCTTGG+AGG | - | chr8_4:35622075-35622094 | None:intergenic | 45.0% | |
| ! | GAACCACATCCTCATTTTCG+AGG | - | chr8_4:35622247-35622266 | None:intergenic | 45.0% |
| AAATGAGGATGTGGTTCACC+AGG | + | chr8_4:35622250-35622269 | Msa1324830:CDS | 45.0% | |
| !! | CATCACAAAAGAGAGCACCT+AGG | - | chr8_4:35622409-35622428 | None:intergenic | 45.0% |
| !!! | GCCACAAATGATGCTGCTTT+TGG | + | chr8_4:35622524-35622543 | Msa1324830:CDS | 45.0% |
| GCCAAAAGCAGCATCATTTG+TGG | - | chr8_4:35622528-35622547 | None:intergenic | 45.0% | |
| TTTAGGTCGAACCCCATCAA+TGG | - | chr8_4:35622624-35622643 | None:intergenic | 45.0% | |
| TATCTTCCAGGAGACCTGTA+AGG | - | chr8_4:35622730-35622749 | None:intergenic | 45.0% | |
| AACACGCAGTTTGAACTCTG+AGG | - | chr8_4:35622866-35622885 | None:intergenic | 45.0% | |
| TTCAAACTGCGTGTTTCCTG+AGG | + | chr8_4:35622871-35622890 | Msa1324830:CDS | 45.0% | |
| TCAAACTGCGTGTTTCCTGA+GGG | + | chr8_4:35622872-35622891 | Msa1324830:CDS | 45.0% | |
| AGAGAAATCAACTTGCCCTC+AGG | - | chr8_4:35622890-35622909 | None:intergenic | 45.0% | |
| !! | GGGCAAGTTGATTTCTCTCA+AGG | + | chr8_4:35622892-35622911 | Msa1324830:CDS | 45.0% |
| CTGCAATTCATGCTCAAGTG+GGG | + | chr8_4:35622952-35622971 | Msa1324830:CDS | 45.0% | |
| !! | AAAGGCCTTGTTGGGGATAA+AGG | + | chr8_4:35622998-35623017 | Msa1324830:CDS | 45.0% |
| !!! | CATGCTTTTCCGACTGGTTT+CGG | + | chr8_4:35623182-35623201 | Msa1324830:CDS | 45.0% |
| TTCATCGGATCCTTGATGCA+AGG | + | chr8_4:35623225-35623244 | Msa1324830:CDS | 45.0% | |
| CCTATGCATACCTTGCATCA+AGG | - | chr8_4:35623238-35623257 | None:intergenic | 45.0% | |
| CCTTGATGCAAGGTATGCAT+AGG | + | chr8_4:35623235-35623254 | Msa1324830:intron | 45.0% | |
| !! | TTCCCTGCACTTTTAAGGAG+AGG | + | chr8_4:35623295-35623314 | Msa1324830:intron | 45.0% |
| AGCAAATAGTGCTTCGATGC+AGG | + | chr8_4:35623706-35623725 | Msa1324830:CDS | 45.0% | |
| GCAAATAGTGCTTCGATGCA+GGG | + | chr8_4:35623707-35623726 | Msa1324830:CDS | 45.0% | |
| GCAAAGAGATCTCTCCTCAA+GGG | + | chr8_4:35624094-35624113 | Msa1324830:intron | 45.0% | |
| GAACATGAACCCACTACATC+AGG | + | chr8_4:35624309-35624328 | Msa1324830:CDS | 45.0% | |
| GCAAGATGACCTGATGTAGT+GGG | - | chr8_4:35624321-35624340 | None:intergenic | 45.0% | |
| GTACTTGATGAGGCTTTCGT+CGG | - | chr8_4:35624457-35624476 | None:intergenic | 45.0% | |
| !! | TGCTAGTGTGATGGATTCAG+AGG | + | chr8_4:35624846-35624865 | Msa1324830:CDS | 45.0% |
| AAAGAAGTCTCTTGCTCACG+TGG | + | chr8_4:35624940-35624959 | Msa1324830:CDS | 45.0% | |
| !!! | AATAATTTTATTTAAAGAAT+AGG | + | chr8_4:35624072-35624091 | Msa1324830:intron | 5.0% |
| GTCCGCGTTTGGAGAAATTG+GGG | + | chr8_4:35618349-35618368 | Msa1324830:CDS | 50.0% | |
| ATTAAGGGGAAGGGTGAGTG+TGG | + | chr8_4:35618390-35618409 | Msa1324830:CDS | 50.0% | |
| !! | GAAAGGGATGGCTTTGGAGT+TGG | + | chr8_4:35618446-35618465 | Msa1324830:CDS | 50.0% |
| TTGTGGATCCGAAGTTCTCG+TGG | + | chr8_4:35618697-35618716 | Msa1324830:CDS | 50.0% | |
| TATGGTGAAGGGGAAACCCT+TGG | + | chr8_4:35618993-35619012 | Msa1324830:intron | 50.0% | |
| TCTGAGCTAGCCCTTCATTC+TGG | - | chr8_4:35619597-35619616 | None:intergenic | 50.0% | |
| ! | TTGGCAGCGTGGTGCTTTTA+TGG | + | chr8_4:35619738-35619757 | Msa1324830:intron | 50.0% |
| ! | TGGCAGCGTGGTGCTTTTAT+GGG | + | chr8_4:35619739-35619758 | Msa1324830:intron | 50.0% |
| GCATTGCGGTTTCCTGAAAC+TGG | + | chr8_4:35619801-35619820 | Msa1324830:CDS | 50.0% | |
| AGGGGCCTATGAGAACATAG+TGG | + | chr8_4:35619910-35619929 | Msa1324830:intron | 50.0% | |
| GGGGCCTATGAGAACATAGT+GGG | + | chr8_4:35619911-35619930 | Msa1324830:intron | 50.0% | |
| GGGCCTATGAGAACATAGTG+GGG | + | chr8_4:35619912-35619931 | Msa1324830:intron | 50.0% | |
| CCTCCCCACTATGTTCTCAT+AGG | - | chr8_4:35619918-35619937 | None:intergenic | 50.0% | |
| ! | CCTATGAGAACATAGTGGGG+AGG | + | chr8_4:35619915-35619934 | Msa1324830:intron | 50.0% |
| ! | TCTTGTCTTTTCCTGGCGGA+AGG | + | chr8_4:35619950-35619969 | Msa1324830:intron | 50.0% |
| !! | GACGTAGGCGTTGTTTTGCA+TGG | + | chr8_4:35620207-35620226 | Msa1324830:CDS | 50.0% |
| AGCTGCAGTCTTCTGGTCAA+TGG | - | chr8_4:35620469-35620488 | None:intergenic | 50.0% | |
| ATTGACCAGAAGACTGCAGC+TGG | + | chr8_4:35620468-35620487 | Msa1324830:CDS | 50.0% | |
| ATCAACCAGCTGCAGTCTTC+TGG | - | chr8_4:35620476-35620495 | None:intergenic | 50.0% | |
| TACCAGACCTTCCCTTGACT+TGG | + | chr8_4:35620521-35620540 | Msa1324830:CDS | 50.0% | |
| TTCCAAGTCAAGGGAAGGTC+TGG | - | chr8_4:35620526-35620545 | None:intergenic | 50.0% | |
| CTTTAGGCCGCAGATGACTT+TGG | + | chr8_4:35620639-35620658 | Msa1324830:intron | 50.0% | |
| GCCGCAGATGACTTTGGTAA+TGG | + | chr8_4:35620645-35620664 | Msa1324830:intron | 50.0% | |
| !! | TTGTTATTTGGCTGGCTGGC+AGG | + | chr8_4:35621245-35621264 | Msa1324830:intron | 50.0% |
| ATAAGCTGTTAGGCGATGCC+TGG | + | chr8_4:35621455-35621474 | Msa1324830:intron | 50.0% | |
| AAGAGCGAGTTTCCTCCAAG+AGG | + | chr8_4:35622060-35622079 | Msa1324830:CDS | 50.0% | |
| AGGCCTCGAAAATGAGGATG+TGG | + | chr8_4:35622241-35622260 | Msa1324830:CDS | 50.0% | |
| AGGAGACCTGTAAGGTTGAC+AGG | - | chr8_4:35622722-35622741 | None:intergenic | 50.0% | |
| TGTCAACCTTACAGGTCTCC+TGG | + | chr8_4:35622721-35622740 | Msa1324830:CDS | 50.0% | |
| ACATTGGGACTGTAGTGGCT+TGG | + | chr8_4:35622822-35622841 | Msa1324830:CDS | 50.0% | |
| GGCATTCATGACATCAGCTC+CGG | + | chr8_4:35622926-35622945 | Msa1324830:CDS | 50.0% | |
| TGAAGGACTCATCCTTCCAG+TGG | + | chr8_4:35623446-35623465 | Msa1324830:intron | 50.0% | |
| AGGCAACTGGGAAATCAAGC+AGG | - | chr8_4:35623670-35623689 | None:intergenic | 50.0% | |
| TGCTTGATTTCCCAGTTGCC+TGG | + | chr8_4:35623669-35623688 | Msa1324830:CDS | 50.0% | |
| GCTTGATTTCCCAGTTGCCT+GGG | + | chr8_4:35623670-35623689 | Msa1324830:CDS | 50.0% | |
| GGCAAAGAGATCTCTCCTCA+AGG | + | chr8_4:35624093-35624112 | Msa1324830:intron | 50.0% | |
| ATTGCTGGGCTAATGCTGAG+AGG | + | chr8_4:35624265-35624284 | Msa1324830:CDS | 50.0% | |
| TTGCTGGGCTAATGCTGAGA+GGG | + | chr8_4:35624266-35624285 | Msa1324830:CDS | 50.0% | |
| GGCAAGATGACCTGATGTAG+TGG | - | chr8_4:35624322-35624341 | None:intergenic | 50.0% | |
| GGCCCCAATTTCTCCAAACG+CGG | - | chr8_4:35618354-35618373 | None:intergenic | 55.0% | |
| TGAGGTAGGGAACAGCGAAC+TGG | - | chr8_4:35619626-35619645 | None:intergenic | 55.0% | |
| ! | GGCAGCGTGGTGCTTTTATG+GGG | + | chr8_4:35619740-35619759 | Msa1324830:intron | 55.0% |
| ! | CTGCAGCTGGTTGATGCTAC+TGG | + | chr8_4:35620481-35620500 | Msa1324830:CDS | 55.0% |
| ! | CAGCTGGTTGATGCTACTGG+TGG | + | chr8_4:35620484-35620503 | Msa1324830:CDS | 55.0% |
| ATGTAGAGCGCAACAGAGCC+TGG | - | chr8_4:35622271-35622290 | None:intergenic | 55.0% | |
| !!! | GATGCTGCTTTTGGCAGCAG+TGG | + | chr8_4:35622533-35622552 | Msa1324830:CDS | 55.0% |
| !! | TTTCCGACTGGTTTCGGACC+TGG | + | chr8_4:35623188-35623207 | Msa1324830:CDS | 55.0% |
| ACACCAGGTCCGAAACCAGT+CGG | - | chr8_4:35623194-35623213 | None:intergenic | 55.0% | |
| AGTCTCTTGCTCACGTGGTC+TGG | + | chr8_4:35624945-35624964 | Msa1324830:CDS | 55.0% | |
| GGTGAAGGGGAAACCCTTGG+AGG | + | chr8_4:35618996-35619015 | Msa1324830:intron | 60.0% | |
| !!! | TGCTTTTGACTCGGGCACCC+AGG | - | chr8_4:35623690-35623709 | None:intergenic | 60.0% |
| ACAGACAGGGAACAGGCTGC+AGG | - | chr8_4:35624712-35624731 | None:intergenic | 60.0% | |
| TTGCTCACGTGGTCTGGCTG+AGG | + | chr8_4:35624951-35624970 | Msa1324830:CDS | 60.0% | |
| ACTCGGGCACCCAGGCAACT+GGG | - | chr8_4:35623682-35623701 | None:intergenic | 65.0% | |
| GACTCGGGCACCCAGGCAAC+TGG | - | chr8_4:35623683-35623702 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 35618228 | 35625187 | 35618228 | ID=Msa1324830;Name=Msa1324830 |
| chr8_4 | mRNA | 35618228 | 35625187 | 35618228 | ID=Msa1324830-mRNA-1;Parent=Msa1324830;Name=Msa1324830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.93|0.62|1|1|0.87|16|179|1072 |
| chr8_4 | exon | 35618228 | 35618539 | 35618228 | ID=Msa1324830-mRNA-1:exon:11182;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35618675 | 35618793 | 35618675 | ID=Msa1324830-mRNA-1:exon:11183;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35619259 | 35619333 | 35619259 | ID=Msa1324830-mRNA-1:exon:11184;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35619431 | 35619509 | 35619431 | ID=Msa1324830-mRNA-1:exon:11185;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35619598 | 35619660 | 35619598 | ID=Msa1324830-mRNA-1:exon:11186;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35619745 | 35619822 | 35619745 | ID=Msa1324830-mRNA-1:exon:11187;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35620042 | 35620239 | 35620042 | ID=Msa1324830-mRNA-1:exon:11188;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35620460 | 35620564 | 35620460 | ID=Msa1324830-mRNA-1:exon:11189;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35620741 | 35621013 | 35620741 | ID=Msa1324830-mRNA-1:exon:11190;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35621897 | 35622379 | 35621897 | ID=Msa1324830-mRNA-1:exon:11191;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35622467 | 35623057 | 35622467 | ID=Msa1324830-mRNA-1:exon:11192;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35623155 | 35623246 | 35623155 | ID=Msa1324830-mRNA-1:exon:11193;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35623530 | 35623728 | 35623530 | ID=Msa1324830-mRNA-1:exon:11194;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35623809 | 35623923 | 35623809 | ID=Msa1324830-mRNA-1:exon:11195;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35624244 | 35624509 | 35624244 | ID=Msa1324830-mRNA-1:exon:11196;Parent=Msa1324830-mRNA-1 |
| chr8_4 | exon | 35624838 | 35625187 | 35624838 | ID=Msa1324830-mRNA-1:exon:11197;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35618228 | 35618539 | 35618228 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35618675 | 35618793 | 35618675 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35619259 | 35619333 | 35619259 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35619431 | 35619509 | 35619431 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35619598 | 35619660 | 35619598 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35619745 | 35619822 | 35619745 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35620042 | 35620239 | 35620042 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35620460 | 35620564 | 35620460 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35620741 | 35621013 | 35620741 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35621897 | 35622379 | 35621897 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35622467 | 35623057 | 35622467 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35623155 | 35623246 | 35623155 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35623530 | 35623728 | 35623530 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35623809 | 35623923 | 35623809 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35624244 | 35624509 | 35624244 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | CDS | 35624838 | 35625008 | 35624838 | ID=Msa1324830-mRNA-1:cds;Parent=Msa1324830-mRNA-1 |
| chr8_4 | three_prime_UTR | 35625009 | 35625187 | 35625009 | ID=Msa1324830-mRNA-1:three_prime_utr;Parent=Msa1324830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
