Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332960 | XP_024638509.1 | 98.381 | 803 | 13 | 0 | 1 | 803 | 1 | 803 | 0.0 | 1638 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332960 | A0A396IFK0 | 98.381 | 803 | 13 | 0 | 1 | 803 | 1 | 803 | 0.0 | 1638 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074510 | Msa1332960 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa1321340 | Msa1332960 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0442830 | Msa1332960 | 0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0296600 | Msa1332960 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa1218810 | Msa1332960 | 0.801224 | 9.961244e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332960 | MtrunA17_Chr4g0068461 | 98.381 | 803 | 13 | 0 | 1 | 803 | 1 | 803 | 0.0 | 1638 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332960 | AT4G16180.2 | 74.842 | 791 | 194 | 3 | 16 | 801 | 27 | 817 | 0.0 | 1249 |
| Msa1332960 | AT4G16180.1 | 71.255 | 247 | 71 | 0 | 16 | 262 | 27 | 273 | 4.17e-129 | 386 |
Find 221 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGACAGCTTGCTTCTT+TGG | 0.182055 | 8_4:-52973297 | Msa1332960:CDS |
| CTTCTTGTTTGCTGGCTTCA+TGG | 0.201238 | 8_4:+52968517 | None:intergenic |
| TGCAACTTACAGTCTGATTT+TGG | 0.229934 | 8_4:-52974220 | Msa1332960:intron |
| GGGCAAGAAGTAGTAATTAT+TGG | 0.234310 | 8_4:-52971685 | Msa1332960:CDS |
| TGATTGAATTGACTCGTTTC+AGG | 0.246261 | 8_4:+52976083 | None:intergenic |
| GGAGATCTTCAACCAACTTT+TGG | 0.251497 | 8_4:-52970965 | Msa1332960:CDS |
| GGCAAGAAGTAGTAATTATT+GGG | 0.268633 | 8_4:-52971684 | Msa1332960:CDS |
| TCTTCTCAAACGTACATCTA+TGG | 0.277365 | 8_4:-52968613 | Msa1332960:CDS |
| AATAGACAATAGGGTTAAAA+TGG | 0.286401 | 8_4:-52968108 | Msa1332960:three_prime_UTR |
| ATTATATGATCATCGGTTAA+AGG | 0.290124 | 8_4:-52968896 | Msa1332960:CDS |
| TACTTAAGCATAAGCCTCTT+TGG | 0.290880 | 8_4:-52971042 | Msa1332960:CDS |
| TCAGCAGGGCCCTGTACTTA+TGG | 0.292984 | 8_4:-52973428 | Msa1332960:CDS |
| ATGGAAACGGCCATCATTCT+TGG | 0.294606 | 8_4:+52971582 | None:intergenic |
| TGATAAGGCTTCTTGTTTGC+TGG | 0.296971 | 8_4:+52968509 | None:intergenic |
| AGATCTATTCCCTTGAGTTT+AGG | 0.312681 | 8_4:+52973769 | None:intergenic |
| TATAAACATCGACGAAATTA+AGG | 0.318071 | 8_4:-52971870 | Msa1332960:CDS |
| TCGTCCTCCATCATAAGATT+TGG | 0.323360 | 8_4:+52970289 | None:intergenic |
| GACCTATTGTGAATTGGCTT+TGG | 0.331999 | 8_4:-52969506 | Msa1332960:CDS |
| TTCTCCTTCTTTCCCTTCAC+AGG | 0.338908 | 8_4:+52969142 | None:intergenic |
| TGCTGCTGGATTGCTTGAAA+TGG | 0.339263 | 8_4:-52971140 | Msa1332960:CDS |
| CCCACAACATTTCGTAATCT+TGG | 0.341529 | 8_4:+52973362 | None:intergenic |
| AAAACAAAACAATAGACAAT+AGG | 0.344549 | 8_4:-52968118 | Msa1332960:three_prime_UTR |
| TGTTCATACCAAGACTTATC+TGG | 0.350299 | 8_4:-52971560 | Msa1332960:CDS |
| TCTGCTGATGTGCTTGCTGC+TGG | 0.356573 | 8_4:-52971154 | Msa1332960:CDS |
| TGACAATGAGTTATGACAAT+AGG | 0.361496 | 8_4:-52968152 | Msa1332960:three_prime_UTR |
| AATATTTCCTCCGACAGAAT+TGG | 0.362704 | 8_4:-52971096 | Msa1332960:CDS |
| AGTTTCGCTAAATCTGCTTC+AGG | 0.367093 | 8_4:+52968197 | None:intergenic |
| TCAAGCACAACGTCATATAT+TGG | 0.374254 | 8_4:-52969595 | Msa1332960:CDS |
| AATTCACAATAGGTCTTTCA+TGG | 0.376401 | 8_4:+52969514 | None:intergenic |
| ATGAAAGACCTATTGTGAAT+TGG | 0.376566 | 8_4:-52969512 | Msa1332960:CDS |
| ATGGAGCATGCGGCGAATAT+CGG | 0.377215 | 8_4:+52975884 | None:intergenic |
| ACCTATTGTGAATTGGCTTT+GGG | 0.382620 | 8_4:-52969505 | Msa1332960:CDS |
| GATCTTGATAGTTTAATGTA+TGG | 0.388701 | 8_4:-52973751 | Msa1332960:CDS |
| ACACGAATTAGTTGAGCGTT+TGG | 0.389031 | 8_4:-52969053 | Msa1332960:CDS |
| AATTGACTCGTTTCAGGAAT+CGG | 0.391882 | 8_4:+52976089 | None:intergenic |
| ACATGCTTTCCTCGCTCCTT+TGG | 0.395161 | 8_4:+52968250 | None:intergenic |
| TCGATACAATATTATGCAAA+AGG | 0.395938 | 8_4:-52971906 | Msa1332960:CDS |
| ACATGAGATGTATTTGAAAA+TGG | 0.403371 | 8_4:+52969459 | None:intergenic |
| GTGGAGGAGCAACTCAAGTT+TGG | 0.404844 | 8_4:-52973654 | Msa1332960:CDS |
| ATGTTATAGCACCTGATGTT+AGG | 0.406301 | 8_4:-52973256 | Msa1332960:intron |
| ATTCATTGTAAACTTTGATA+AGG | 0.406785 | 8_4:-52974062 | Msa1332960:intron |
| TCTTGATATTGAGCATCATT+TGG | 0.407751 | 8_4:-52975592 | Msa1332960:CDS |
| TCAACTAATTCGTGTGGAAA+TGG | 0.411947 | 8_4:+52969061 | None:intergenic |
| TATGATGGAGGACGAAAGTA+TGG | 0.412196 | 8_4:-52970281 | Msa1332960:CDS |
| GTGGTCATTGACCTTTCAGC+AGG | 0.413376 | 8_4:-52973443 | Msa1332960:CDS |
| GCAGCCGGTTGTCATCCATT+TGG | 0.416805 | 8_4:-52969483 | Msa1332960:CDS |
| ATGAATATTGCACTTGGCAC+TGG | 0.420692 | 8_4:+52974079 | None:intergenic |
| AATTCGTGTGGAAATGGTTC+AGG | 0.422803 | 8_4:+52969067 | None:intergenic |
| ATTTATCGTTATCGCTATGA+TGG | 0.423220 | 8_4:-52973676 | Msa1332960:CDS |
| AATATTTATTTGAAAGAGAT+GGG | 0.423391 | 8_4:+52971113 | None:intergenic |
| ACTACTCTTGTTCCAAAAGT+TGG | 0.423682 | 8_4:+52970953 | None:intergenic |
| GACAATGAGTTATGACAATA+GGG | 0.423847 | 8_4:-52968151 | Msa1332960:three_prime_UTR |
| CAACATTTCGTAATCTTGGC+AGG | 0.426960 | 8_4:+52973366 | None:intergenic |
| GAATGAATTTGAGAATTTGT+TGG | 0.433010 | 8_4:+52976134 | None:intergenic |
| AACTCAAGTTTGGCTGAGCT+CGG | 0.436422 | 8_4:-52973644 | Msa1332960:CDS |
| GGCGTTTAAATGGAATGTTT+AGG | 0.437551 | 8_4:-52968223 | Msa1332960:three_prime_UTR |
| GGTTCTGAAGTGTGAATAAC+CGG | 0.437956 | 8_4:+52976234 | None:intergenic |
| CTGCCGTCGCTGAAGCTCAC+TGG | 0.438244 | 8_4:+52976173 | None:intergenic |
| GTGACCGGATTCTCTCTTGA+AGG | 0.438744 | 8_4:+52975956 | None:intergenic |
| GCTTTCCTCGCTCCTTTGGA+AGG | 0.440173 | 8_4:+52968254 | None:intergenic |
| AAATATTTATTTGAAAGAGA+TGG | 0.441835 | 8_4:+52971112 | None:intergenic |
| AAACAAAACAATAGACAATA+GGG | 0.441872 | 8_4:-52968117 | Msa1332960:three_prime_UTR |
| TGGCAGTGGTATGCTCTGCC+TGG | 0.445579 | 8_4:+52968484 | None:intergenic |
| GTTGAATAGAAACAAATTCC+CGG | 0.451412 | 8_4:-52968403 | Msa1332960:three_prime_UTR |
| ATGCTCTGCCTGGTGTGATA+AGG | 0.454063 | 8_4:+52968494 | None:intergenic |
| TCCACCCGCCGGGACTTCAC+TGG | 0.458980 | 8_4:+52976213 | None:intergenic |
| ATATCTTCCTCAGTTAGCTC+AGG | 0.461761 | 8_4:+52973721 | None:intergenic |
| GTTGCTTCAACTTCAAATAG+AGG | 0.463738 | 8_4:+52974187 | None:intergenic |
| CTTCTCAAACGTACATCTAT+GGG | 0.466572 | 8_4:-52968612 | Msa1332960:CDS |
| CTTTCCTCGCTCCTTTGGAA+GGG | 0.468934 | 8_4:+52968255 | None:intergenic |
| ACTTCCAACGGAACTTGAAA+CGG | 0.472686 | 8_4:+52975744 | None:intergenic |
| GAGTACAGCATTTGAAATAC+TGG | 0.474444 | 8_4:+52974154 | None:intergenic |
| GAGAATCCGGTCACCCTCAA+TGG | 0.475510 | 8_4:-52975947 | Msa1332960:CDS |
| AAGGCGCTGTGGTGCCATTG+AGG | 0.476011 | 8_4:+52975933 | None:intergenic |
| GAAGGGTTGTCGTGCTGACT+CGG | 0.476109 | 8_4:+52975974 | None:intergenic |
| AAATGGTTCAGGCAAATTAG+TGG | 0.478339 | 8_4:+52969078 | None:intergenic |
| TGGTCCAAATGGATGACAAC+CGG | 0.482753 | 8_4:+52969479 | None:intergenic |
| TGCTATCAGTTCAGGCTGTC+CGG | 0.483583 | 8_4:+52974394 | None:intergenic |
| TTCAACCTTACCATAAGTAC+AGG | 0.484199 | 8_4:+52973418 | None:intergenic |
| TGCCGTCGCTGAAGCTCACT+GGG | 0.485840 | 8_4:+52976174 | None:intergenic |
| ACATGAGAAGCCTTCACATA+TGG | 0.491265 | 8_4:+52969537 | None:intergenic |
| GTATTTGAAAATGGTCCAAA+TGG | 0.494802 | 8_4:+52969468 | None:intergenic |
| GTGAATTGGCTTTGGGCAGC+CGG | 0.498237 | 8_4:-52969498 | Msa1332960:CDS |
| GCCCAAAGCCAATTCACAAT+AGG | 0.498822 | 8_4:+52969504 | None:intergenic |
| CAACCCTTCAAGAGAGAATC+CGG | 0.499083 | 8_4:-52975960 | Msa1332960:CDS |
| ACTCAAGTTTGGCTGAGCTC+GGG | 0.501574 | 8_4:-52973643 | Msa1332960:CDS |
| TTCTATGCGCAGACCGTCCA+AGG | 0.501965 | 8_4:-52969202 | Msa1332960:intron |
| CTTCATTATTATATGATCAT+CGG | 0.502242 | 8_4:-52968903 | Msa1332960:CDS |
| CGATACAATATTATGCAAAA+GGG | 0.502596 | 8_4:-52971905 | Msa1332960:CDS |
| AGGAAGAATGTAAAGAAACT+AGG | 0.505233 | 8_4:-52970986 | Msa1332960:CDS |
| AGGCGCTGTGGTGCCATTGA+GGG | 0.506245 | 8_4:+52975934 | None:intergenic |
| GTACTACCTCGGCGCGAGAA+TGG | 0.506864 | 8_4:+52975865 | None:intergenic |
| GCTGGTATTGCCTCAGTGGT+GGG | 0.511543 | 8_4:-52969573 | Msa1332960:CDS |
| GGTAAGGTTGAAGCTGAAGA+GGG | 0.511645 | 8_4:-52973407 | Msa1332960:CDS |
| GGCTGGTATTGCCTCAGTGG+TGG | 0.515630 | 8_4:-52969574 | Msa1332960:CDS |
| CTTCAGAACCAGTGAAGTCC+CGG | 0.522517 | 8_4:-52976221 | Msa1332960:five_prime_UTR |
| TCCCCTTGGTGAGCCTGTGA+AGG | 0.524083 | 8_4:-52969155 | Msa1332960:CDS |
| TCCCTTCACAGGCTCACCAA+GGG | 0.526191 | 8_4:+52969153 | None:intergenic |
| GAATGCATAGCGATCAATGC+AGG | 0.527592 | 8_4:-52968429 | Msa1332960:three_prime_UTR |
| CATATTTGACATGGATAGTG+TGG | 0.529423 | 8_4:-52974128 | Msa1332960:CDS |
| CATCGACGAAATTAAGGCAG+AGG | 0.529959 | 8_4:-52971864 | Msa1332960:intron |
| ACCAGTGAAGTCCCGGCGGG+TGG | 0.531980 | 8_4:-52976214 | Msa1332960:five_prime_UTR |
| ACTATCCATGTCAAATATGT+AGG | 0.533374 | 8_4:+52974132 | None:intergenic |
| AAAATGAAAAGATTCCTTTG+AGG | 0.535489 | 8_4:-52970219 | Msa1332960:intron |
| CCCTCTCACTCGTCAAAACA+TGG | 0.536316 | 8_4:+52968680 | None:intergenic |
| GATACTCTGCTGCAAAACCT+TGG | 0.536916 | 8_4:+52969185 | None:intergenic |
| ATCAACCACTGAACTGTGGT+TGG | 0.537281 | 8_4:-52969119 | Msa1332960:CDS |
| GCCAAGATTACGAAATGTTG+TGG | 0.539972 | 8_4:-52973363 | Msa1332960:CDS |
| TAGTCAATGTTATGTTACTC+CGG | 0.540896 | 8_4:+52968384 | None:intergenic |
| TGACCGGATTCTCTCTTGAA+GGG | 0.542698 | 8_4:+52975957 | None:intergenic |
| CTCTGCTGCAAAACCTTGGA+CGG | 0.543642 | 8_4:+52969189 | None:intergenic |
| CCAAGATTACGAAATGTTGT+GGG | 0.545962 | 8_4:-52973362 | Msa1332960:CDS |
| ACATTACGTTACCTAACATC+AGG | 0.546612 | 8_4:+52973245 | None:intergenic |
| AAGTTTGGCTGAGCTCGGGC+AGG | 0.546912 | 8_4:-52973639 | Msa1332960:intron |
| AGTCAATGTTATGTTACTCC+GGG | 0.549320 | 8_4:+52968385 | None:intergenic |
| CGATGTTTATACTGTAATTG+TGG | 0.551351 | 8_4:+52971882 | None:intergenic |
| CAATAGGGTTAAAATGGTGT+TGG | 0.552505 | 8_4:-52968102 | Msa1332960:three_prime_UTR |
| AATATCTGAACTGTTCAAGA+AGG | 0.553406 | 8_4:+52968870 | None:intergenic |
| GCACAACGTCATATATTGGC+TGG | 0.554553 | 8_4:-52969591 | Msa1332960:CDS |
| TGTAGATCCAAATCTTATGA+TGG | 0.554966 | 8_4:-52970296 | Msa1332960:CDS |
| TGGTAAGGTTGAAGCTGAAG+AGG | 0.555156 | 8_4:-52973408 | Msa1332960:CDS |
| AGCACCGTCCAGATAAGTCT+TGG | 0.555342 | 8_4:+52971552 | None:intergenic |
| GAATTGGATGGATGAATCTG+AGG | 0.555855 | 8_4:-52971080 | Msa1332960:CDS |
| TTCCCTTCACAGGCTCACCA+AGG | 0.556794 | 8_4:+52969152 | None:intergenic |
| GAGACTAGATCCTAAACTCA+AGG | 0.557280 | 8_4:-52973779 | Msa1332960:CDS |
| GAATTTGAGAATTTGTTGGT+TGG | 0.557834 | 8_4:+52976138 | None:intergenic |
| AAACAAGAAGGTCTATGAGT+AGG | 0.558501 | 8_4:+52975630 | None:intergenic |
| GGTATTGCCTCAGTGGTGGG+TGG | 0.558929 | 8_4:-52969570 | Msa1332960:CDS |
| AAAAGCATTGAAAGAGGCAA+TGG | 0.561055 | 8_4:-52974366 | Msa1332960:CDS |
| TGGTCATTGACCTTTCAGCA+GGG | 0.561594 | 8_4:-52973442 | Msa1332960:CDS |
| AAAGAGGCAATGGTTCCTGC+AGG | 0.562165 | 8_4:-52974356 | Msa1332960:CDS |
| ATCATATTCACCCACCTCAA+AGG | 0.562534 | 8_4:+52970205 | None:intergenic |
| AAGTACAGGGCCCTGCTGAA+AGG | 0.562990 | 8_4:+52973432 | None:intergenic |
| TCTTGGTATGAACATGGAAA+CGG | 0.563061 | 8_4:+52971569 | None:intergenic |
| CCCCTTGGTGAGCCTGTGAA+GGG | 0.565207 | 8_4:-52969154 | Msa1332960:CDS |
| TACGTTTGAGAAGAGTGCAC+AGG | 0.565869 | 8_4:+52968622 | None:intergenic |
| ACCTTCTTGTTTAGAGACTG+AGG | 0.566619 | 8_4:-52975619 | Msa1332960:CDS |
| AGGGCCCTGTACTTATGGTA+AGG | 0.567019 | 8_4:-52973423 | Msa1332960:CDS |
| TCCTCAGTCTCTAAACAAGA+AGG | 0.567630 | 8_4:+52975618 | None:intergenic |
| TGAGCCTGTGAAGGGAAAGA+AGG | 0.568594 | 8_4:-52969146 | Msa1332960:CDS |
| GTGGTGCCATTGAGGGTGAC+CGG | 0.569335 | 8_4:+52975941 | None:intergenic |
| TTGTAGGTTCTACCAGCAGG+GGG | 0.571258 | 8_4:-52968350 | Msa1332960:three_prime_UTR |
| TGCTTCTTTGGTATCAACCA+CGG | 0.571299 | 8_4:-52973285 | Msa1332960:CDS |
| CCGCAATTGACAGCTTCTCA+TGG | 0.571441 | 8_4:+52971641 | None:intergenic |
| GGGATCTTCTGTTACAGAGA+TGG | 0.573024 | 8_4:-52974107 | Msa1332960:CDS |
| GCAAGAAGTAGTAATTATTG+GGG | 0.574692 | 8_4:-52971683 | Msa1332960:CDS |
| AGTTCCGTTGGAAGTGAATG+TGG | 0.576749 | 8_4:-52975736 | Msa1332960:CDS |
| CTGCAGGAAACCAAGAATGA+TGG | 0.580092 | 8_4:-52971592 | Msa1332960:CDS |
| GGTTCCGTTTCAAGTTCCGT+TGG | 0.580298 | 8_4:-52975748 | Msa1332960:CDS |
| TATGACGTTGTGCTTGAGAT+GGG | 0.583156 | 8_4:+52969601 | None:intergenic |
| CCATGAGAAGCTGTCAATTG+CGG | 0.583948 | 8_4:-52971641 | Msa1332960:CDS |
| TATGCGTGGACATTCACTGC+AGG | 0.586804 | 8_4:-52971608 | Msa1332960:CDS |
| AGAAGCTGTTCTAATTTATG+CGG | 0.588014 | 8_4:+52975666 | None:intergenic |
| AAGTTATACGATGACCAAAG+AGG | 0.589182 | 8_4:+52971028 | None:intergenic |
| TGAAGTTGAAGCAACAGCTG+TGG | 0.589594 | 8_4:-52974179 | Msa1332960:CDS |
| CGTTATCGCTATGATGGTGG+AGG | 0.589803 | 8_4:-52973670 | Msa1332960:CDS |
| TTTGTAGGTTCTACCAGCAG+GGG | 0.591638 | 8_4:-52968351 | Msa1332960:three_prime_UTR |
| ATCCCAGTGAGCTTCAGCGA+CGG | 0.594102 | 8_4:-52976176 | Msa1332960:five_prime_UTR |
| TATCGTTATCGCTATGATGG+TGG | 0.594515 | 8_4:-52973673 | Msa1332960:CDS |
| TTTACAATGAATATTGCACT+TGG | 0.597102 | 8_4:+52974073 | None:intergenic |
| AAAACCACATTCACTTCCAA+CGG | 0.597969 | 8_4:+52975732 | None:intergenic |
| TGGTTCCTGCAGGAAAAGCA+AGG | 0.598430 | 8_4:-52974346 | Msa1332960:CDS |
| AATTGGATGGATGAATCTGA+GGG | 0.599284 | 8_4:-52971079 | Msa1332960:CDS |
| AACTTACTGTTGGGTGAACA+TGG | 0.599343 | 8_4:+52968837 | None:intergenic |
| TTTCCTCCGACAGAATTGGA+TGG | 0.600443 | 8_4:-52971092 | Msa1332960:CDS |
| AACATTTCGTAATCTTGGCA+GGG | 0.601560 | 8_4:+52973367 | None:intergenic |
| GAACAACTAGTCCACCCGCC+GGG | 0.605823 | 8_4:+52976203 | None:intergenic |
| CGGCGCGAGAATGGAGCATG+CGG | 0.606929 | 8_4:+52975874 | None:intergenic |
| ATATGACGTTGTGCTTGAGA+TGG | 0.607427 | 8_4:+52969600 | None:intergenic |
| ATATTTGACATGGATAGTGT+GGG | 0.610210 | 8_4:-52974127 | Msa1332960:CDS |
| CACTTACCAATGCAACATCA+CGG | 0.611354 | 8_4:+52969424 | None:intergenic |
| GCGGCGAATATCGGATCGGA+CGG | 0.611589 | 8_4:+52975893 | None:intergenic |
| AATGCTCCGTGATGTTGCAT+TGG | 0.612680 | 8_4:-52969430 | Msa1332960:intron |
| CATGCTCCATTCTCGCGCCG+AGG | 0.613742 | 8_4:-52975871 | Msa1332960:intron |
| TTCTCAAACGTACATCTATG+GGG | 0.615326 | 8_4:-52968611 | Msa1332960:CDS |
| ATCAATCAATCAATCTGACT+CGG | 0.615490 | 8_4:-52976064 | Msa1332960:five_prime_UTR |
| TTTAAGTGCACCATATGTGA+AGG | 0.615808 | 8_4:-52969547 | Msa1332960:CDS |
| AGAACCAGTGAAGTCCCGGC+GGG | 0.616415 | 8_4:-52976217 | Msa1332960:five_prime_UTR |
| CCCTTCACAGGCTCACCAAG+GGG | 0.617140 | 8_4:+52969154 | None:intergenic |
| TACGCCCTTCCAAAGGAGCG+AGG | 0.617547 | 8_4:-52968259 | Msa1332960:three_prime_UTR |
| ATTGGCTGGTATTGCCTCAG+TGG | 0.620183 | 8_4:-52969577 | Msa1332960:CDS |
| GAGTATCTGAAAACTCCCCT+TGG | 0.620853 | 8_4:-52969169 | Msa1332960:CDS |
| GGAATCACGAACATCGTGGA+AGG | 0.621338 | 8_4:+52975914 | None:intergenic |
| GATAAGTCTTGGTATGAACA+TGG | 0.622215 | 8_4:+52971563 | None:intergenic |
| TATCAACAAGATGCTCCTCA+AGG | 0.624161 | 8_4:+52968929 | None:intergenic |
| ATTCATCCATCCAATTCTGT+CGG | 0.631529 | 8_4:+52971086 | None:intergenic |
| AGACTAGATCCTAAACTCAA+GGG | 0.631701 | 8_4:-52973778 | Msa1332960:CDS |
| CTTCTCCAACCACAGTTCAG+TGG | 0.631810 | 8_4:+52969114 | None:intergenic |
| CATCCATCCAATTCTGTCGG+AGG | 0.632207 | 8_4:+52971089 | None:intergenic |
| ATGTTTCAGAAATACAGAGA+AGG | 0.632392 | 8_4:-52969632 | Msa1332960:CDS |
| AAACGCTCAACTAATTCGTG+TGG | 0.632525 | 8_4:+52969055 | None:intergenic |
| TAAAATTCGTGAAACATCAG+AGG | 0.633134 | 8_4:-52969290 | Msa1332960:intron |
| GAACTCAATATATGCACGTG+TGG | 0.635853 | 8_4:-52969326 | Msa1332960:CDS |
| GCGGTTTCAAAAGCTATGCG+TGG | 0.641027 | 8_4:-52971622 | Msa1332960:CDS |
| GGACGGAATCACGAACATCG+TGG | 0.646802 | 8_4:+52975910 | None:intergenic |
| ACAAGAAGCCTTATCACACC+AGG | 0.648556 | 8_4:-52968502 | Msa1332960:three_prime_UTR |
| ATATGTTTACCAGGGCCTTG+AGG | 0.649877 | 8_4:-52968944 | Msa1332960:intron |
| AGATCCAAATCTTATGATGG+AGG | 0.654539 | 8_4:-52970293 | Msa1332960:CDS |
| AGAACAACTAGTCCACCCGC+CGG | 0.656544 | 8_4:+52976202 | None:intergenic |
| GTACTCCTACATATTTGACA+TGG | 0.656913 | 8_4:-52974137 | Msa1332960:CDS |
| GGTTCCTGCAGGAAAAGCAA+GGG | 0.658305 | 8_4:-52974345 | Msa1332960:CDS |
| ACGTTTGAGAAGAGTGCACA+GGG | 0.661850 | 8_4:+52968623 | None:intergenic |
| GAACATCGTGGAAGGCGCTG+TGG | 0.666826 | 8_4:+52975922 | None:intergenic |
| TCCTGCAGGAAAAGCAAGGG+AGG | 0.667563 | 8_4:-52974342 | Msa1332960:intron |
| TCTCAAACGTACATCTATGG+GGG | 0.668815 | 8_4:-52968610 | Msa1332960:CDS |
| GTTGGACTTAGTCACGTGTG+TGG | 0.670653 | 8_4:-52968084 | Msa1332960:three_prime_UTR |
| TCAATCAATCTGACTCGGCG+AGG | 0.675788 | 8_4:-52976059 | Msa1332960:five_prime_UTR |
| GCATGCGGCGAATATCGGAT+CGG | 0.676609 | 8_4:+52975889 | None:intergenic |
| GGACTTAGTCACGTGTGTGG+AGG | 0.681383 | 8_4:-52968081 | Msa1332960:three_prime_UTR |
| GGAGTAACATAACATTGACT+AGG | 0.685426 | 8_4:-52968382 | Msa1332960:three_prime_UTR |
| AGAAATCAACCACTGAACTG+TGG | 0.695434 | 8_4:-52969123 | Msa1332960:CDS |
| TCAACCTTACCATAAGTACA+GGG | 0.702053 | 8_4:+52973419 | None:intergenic |
| CATACCAAGACTTATCTGGA+CGG | 0.713323 | 8_4:-52971556 | Msa1332960:CDS |
| TTCTTTGGTATCAACCACGG+TGG | 0.714616 | 8_4:-52973282 | Msa1332960:CDS |
| CAGAACCAGTGAAGTCCCGG+CGG | 0.717139 | 8_4:-52976218 | Msa1332960:five_prime_UTR |
| TGCTATAACATGTTCCACCG+TGG | 0.734238 | 8_4:+52973268 | None:intergenic |
| TGGAGGACGAAAGTATGGTG+TGG | 0.738554 | 8_4:-52970276 | Msa1332960:CDS |
| ATGAGTGTGATGATCGAACG+AGG | 0.741293 | 8_4:+52976026 | None:intergenic |
| CAAGAAGTAGTAATTATTGG+GGG | 0.747622 | 8_4:-52971682 | Msa1332960:CDS |
| ACTTAAACCACCCACCACTG+AGG | 0.751621 | 8_4:+52969563 | None:intergenic |
| ATTGGATGGATGAATCTGAG+GGG | 0.770592 | 8_4:-52971078 | Msa1332960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATCAATTAAATTAGT+AGG | + | chr8_4:52970332-52970351 | None:intergenic | 10.0% |
| !!! | TATTTTTTAACATTTCTATA+TGG | - | chr8_4:52973102-52973121 | Msa1332960:intron | 10.0% |
| !! | TAAAAAAAATTAAGAATGTT+TGG | - | chr8_4:52973802-52973821 | Msa1332960:intron | 10.0% |
| !!! | TAAAAAAAATGTTTTGAATA+AGG | + | chr8_4:52975503-52975522 | None:intergenic | 10.0% |
| !!! | TTTTTTTCATGAATTTTAAC+CGG | - | chr8_4:52969698-52969717 | Msa1332960:intron | 15.0% |
| !!! | TTTCAACTTATTTTAGTTAT+AGG | - | chr8_4:52970016-52970035 | Msa1332960:intron | 15.0% |
| !!! | AAAGAGTTTTACAAAAATTT+CGG | + | chr8_4:52971178-52971197 | None:intergenic | 15.0% |
| !!! | AAATTTTTGTAAAACTCTTT+AGG | - | chr8_4:52971178-52971197 | Msa1332960:intron | 15.0% |
| !!! | AATTTTTGTAAAACTCTTTA+GGG | - | chr8_4:52971179-52971198 | Msa1332960:intron | 15.0% |
| !!! | TTTCTTATATAATTTTACAC+CGG | - | chr8_4:52972834-52972853 | Msa1332960:intron | 15.0% |
| !! | AATATTTATTTGAAAGAGAT+GGG | + | chr8_4:52973203-52973222 | None:intergenic | 15.0% |
| !! | AAATATTTATTTGAAAGAGA+TGG | + | chr8_4:52973204-52973223 | None:intergenic | 15.0% |
| !!! | ACTATTACTTTTTTTTGAAA+AGG | + | chr8_4:52975577-52975596 | None:intergenic | 15.0% |
| !!! | TCCTATATTCTTTTTTATAT+CGG | + | chr8_4:52975857-52975876 | None:intergenic | 15.0% |
| !! | TAGGAAAATAAGGTAAAAAT+AGG | + | chr8_4:52968873-52968892 | None:intergenic | 20.0% |
| !! | GATATGTGAATTCTATATTA+AGG | - | chr8_4:52969216-52969235 | Msa1332960:intron | 20.0% |
| !!! | TTTTTTCATGAATTTTAACC+GGG | - | chr8_4:52969699-52969718 | Msa1332960:intron | 20.0% |
| !! | TTAAATTGAAATCTTACCAT+AGG | - | chr8_4:52969896-52969915 | Msa1332960:intron | 20.0% |
| !! | ATTCATTGTAAACTTTGATA+AGG | - | chr8_4:52970251-52970270 | Msa1332960:CDS | 20.0% |
| !! | GTTGTCACAAATAAAATAAT+TGG | - | chr8_4:52970373-52970392 | Msa1332960:intron | 20.0% |
| !!! | TGGTCTAATTTTTTTTTTAC+TGG | - | chr8_4:52971683-52971702 | Msa1332960:CDS | 20.0% |
| !! | ACTTATTGAAATGAAAATGA+TGG | + | chr8_4:52971756-52971775 | None:intergenic | 20.0% |
| !! | AAAAAGGAAAATACAAATCT+AGG | + | chr8_4:52971814-52971833 | None:intergenic | 20.0% |
| !!! | TAAGATTTTTTTGTGTTTGT+AGG | - | chr8_4:52971946-52971965 | Msa1332960:CDS | 20.0% |
| !!! | CATAATTTTAACAGAATTAC+AGG | + | chr8_4:52972015-52972034 | None:intergenic | 20.0% |
| !! | CTGTAATTCTGTTAAAATTA+TGG | - | chr8_4:52972013-52972032 | Msa1332960:intron | 20.0% |
| !! | ATTCTGTTAAAATTATGGTA+TGG | - | chr8_4:52972018-52972037 | Msa1332960:intron | 20.0% |
| !! | AACCATATTACAATCATATT+GGG | + | chr8_4:52972087-52972106 | None:intergenic | 20.0% |
| !! | TTAAAAACTGTGCATAAAAA+GGG | + | chr8_4:52972185-52972204 | None:intergenic | 20.0% |
| !! | ATTAAAAACTGTGCATAAAA+AGG | + | chr8_4:52972186-52972205 | None:intergenic | 20.0% |
| !! | TTTAATACTTCTATGAAAGT+TGG | - | chr8_4:52972200-52972219 | Msa1332960:intron | 20.0% |
| !! | TTAATACTTCTATGAAAGTT+GGG | - | chr8_4:52972201-52972220 | Msa1332960:intron | 20.0% |
| !!! | ATACTTTTATTGATATGTTC+AGG | - | chr8_4:52972322-52972341 | Msa1332960:intron | 20.0% |
| !!! | TGATTTTGCAAGATAATTAT+TGG | + | chr8_4:52972384-52972403 | None:intergenic | 20.0% |
| !! | TTATAATTTATTCTTTCCTC+AGG | - | chr8_4:52972585-52972604 | Msa1332960:intron | 20.0% |
| !! | TGAAAAAATTGCTTAATGAT+GGG | - | chr8_4:52972608-52972627 | Msa1332960:intron | 20.0% |
| !! | TAAAATATGACAAGAAAAAG+AGG | - | chr8_4:52973307-52973326 | Msa1332960:CDS | 20.0% |
| !! | CTACTAGATAAAAAATTGAT+TGG | - | chr8_4:52973901-52973920 | Msa1332960:intron | 20.0% |
| !! | TCAAAATTTCAATATTGAAC+TGG | + | chr8_4:52973952-52973971 | None:intergenic | 20.0% |
| !! | CTTCATTATTATATGATCAT+CGG | - | chr8_4:52975410-52975429 | Msa1332960:intron | 20.0% |
| !! | AAAACAAAACAATAGACAAT+AGG | - | chr8_4:52976195-52976214 | Msa1332960:five_prime_UTR | 20.0% |
| !! | AAACAAAACAATAGACAATA+GGG | - | chr8_4:52976196-52976215 | Msa1332960:five_prime_UTR | 20.0% |
| ! | GAATGAATTTGAGAATTTGT+TGG | + | chr8_4:52968182-52968201 | None:intergenic | 25.0% |
| ! | TGAGTCAATAGAAGAAAAAT+GGG | + | chr8_4:52968317-52968336 | None:intergenic | 25.0% |
| ! | AGAAATGAAAGATGAAAAGT+AGG | + | chr8_4:52968768-52968787 | None:intergenic | 25.0% |
| ! | TGTCATAAGTTGTTTACATA+AGG | + | chr8_4:52968841-52968860 | None:intergenic | 25.0% |
| ! | ATAACTGATATGAAAGTAGT+AGG | - | chr8_4:52968924-52968943 | Msa1332960:CDS | 25.0% |
| ! | TAACTGATATGAAAGTAGTA+GGG | - | chr8_4:52968925-52968944 | Msa1332960:CDS | 25.0% |
| !!! | CGCTTAATTTATTTTTGTGT+TGG | + | chr8_4:52969067-52969086 | None:intergenic | 25.0% |
| !! | AAAACCATCTTTTCTACTAT+CGG | + | chr8_4:52969180-52969199 | None:intergenic | 25.0% |
| !! | ATAGTAGAAAAGATGGTTTT+GGG | - | chr8_4:52969180-52969199 | Msa1332960:CDS | 25.0% |
| !!! | TAGTTTTTCTTAGTCTTTCT+AGG | + | chr8_4:52969290-52969309 | None:intergenic | 25.0% |
| ! | TCTACAGATTAATAATGAGT+TGG | - | chr8_4:52969320-52969339 | Msa1332960:CDS | 25.0% |
| ! | AATAATAGAATTAGAACCAC+TGG | - | chr8_4:52969581-52969600 | Msa1332960:CDS | 25.0% |
| ! | AAGAACTATTAAAAGAACGT+AGG | + | chr8_4:52969773-52969792 | None:intergenic | 25.0% |
| ! | TGCTTAATCATTCTTTACAT+AGG | - | chr8_4:52969824-52969843 | Msa1332960:intron | 25.0% |
| !! | ATTTTCAGATTTCAGACAAA+GGG | + | chr8_4:52969866-52969885 | None:intergenic | 25.0% |
| !! | AATTTTCAGATTTCAGACAA+AGG | + | chr8_4:52969867-52969886 | None:intergenic | 25.0% |
| ! | TTTACAATGAATATTGCACT+TGG | + | chr8_4:52970243-52970262 | None:intergenic | 25.0% |
| ! | AATTAGTAGGATATAAAGCA+AGG | + | chr8_4:52970319-52970338 | None:intergenic | 25.0% |
| !! | GATCTTGATAGTTTAATGTA+TGG | - | chr8_4:52970562-52970581 | Msa1332960:intron | 25.0% |
| !! | AATAGAGTGTTATCAATTCT+TGG | - | chr8_4:52970751-52970770 | Msa1332960:intron | 25.0% |
| !!! | TTTTTGTTTGTTCAGATTTG+TGG | - | chr8_4:52970851-52970870 | Msa1332960:intron | 25.0% |
| !! | TTTTCTCCTAAAGTTTTCTT+GGG | - | chr8_4:52971220-52971239 | Msa1332960:intron | 25.0% |
| !! | ATATAATTTTCAGTTCCTGT+CGG | - | chr8_4:52971624-52971643 | Msa1332960:CDS | 25.0% |
| !!! | TTTTTTACTGGAGTGTTTAT+TGG | - | chr8_4:52971695-52971714 | Msa1332960:CDS | 25.0% |
| ! | TAATGCAGCAAATATAAGAA+TGG | + | chr8_4:52971855-52971874 | None:intergenic | 25.0% |
| ! | ACCATATTACAATCATATTG+GGG | + | chr8_4:52972086-52972105 | None:intergenic | 25.0% |
| ! | GAACCATATTACAATCATAT+TGG | + | chr8_4:52972088-52972107 | None:intergenic | 25.0% |
| ! | TAAAAACTGTGCATAAAAAG+GGG | + | chr8_4:52972184-52972203 | None:intergenic | 25.0% |
| ! | TCGATACAATATTATGCAAA+AGG | - | chr8_4:52972407-52972426 | Msa1332960:intron | 25.0% |
| ! | CGATACAATATTATGCAAAA+GGG | - | chr8_4:52972408-52972427 | Msa1332960:intron | 25.0% |
| ! | TATAAACATCGACGAAATTA+AGG | - | chr8_4:52972443-52972462 | Msa1332960:intron | 25.0% |
| ! | GTGAAAAAATTGCTTAATGA+TGG | - | chr8_4:52972607-52972626 | Msa1332960:intron | 25.0% |
| ! | AGACAAAATTGAATACTTTC+CGG | - | chr8_4:52972960-52972979 | Msa1332960:intron | 25.0% |
| ! | GAAGACATATTCATCTATTA+TGG | + | chr8_4:52973044-52973063 | None:intergenic | 25.0% |
| ! | CATTCACTTTCATATTGATA+AGG | + | chr8_4:52973650-52973669 | None:intergenic | 25.0% |
| ! | ACTAACTAGTCAAAAGAAAA+AGG | - | chr8_4:52973694-52973713 | Msa1332960:CDS | 25.0% |
| ! | TAGTTGTGTATTTCAACAAT+TGG | - | chr8_4:52973737-52973756 | Msa1332960:CDS | 25.0% |
| ! | AAAAGATATTATTGCAAAGC+AGG | - | chr8_4:52973834-52973853 | Msa1332960:intron | 25.0% |
| ! | AAAGATATTATTGCAAAGCA+GGG | - | chr8_4:52973835-52973854 | Msa1332960:intron | 25.0% |
| ! | AAAATGAAAAGATTCCTTTG+AGG | - | chr8_4:52974094-52974113 | Msa1332960:CDS | 25.0% |
| ! | CTACAATATGCATATTATGT+TGG | + | chr8_4:52974252-52974271 | None:intergenic | 25.0% |
| ! | ACTAAATGAAATGGATCTAT+AGG | + | chr8_4:52974489-52974508 | None:intergenic | 25.0% |
| !!! | TCTATTTGGCTTTGATTTAA+TGG | - | chr8_4:52974549-52974568 | Msa1332960:intron | 25.0% |
| ! | ACATGAGATGTATTTGAAAA+TGG | + | chr8_4:52974857-52974876 | None:intergenic | 25.0% |
| ! | TTAATATCGGTATATTGAGA+GGG | + | chr8_4:52974915-52974934 | None:intergenic | 25.0% |
| ! | ATTAATATCGGTATATTGAG+AGG | + | chr8_4:52974916-52974935 | None:intergenic | 25.0% |
| !! | CAAAGAACTATTTCTCAAAT+TGG | - | chr8_4:52974944-52974963 | Msa1332960:intron | 25.0% |
| ! | TCAATATGTATATGTTTACC+AGG | - | chr8_4:52975360-52975379 | Msa1332960:intron | 25.0% |
| ! | CAATATGTATATGTTTACCA+GGG | - | chr8_4:52975361-52975380 | Msa1332960:intron | 25.0% |
| !! | ATTATATGATCATCGGTTAA+AGG | - | chr8_4:52975417-52975436 | Msa1332960:intron | 25.0% |
| !!! | TATTCTTTTTTATATCGGCA+TGG | + | chr8_4:52975852-52975871 | None:intergenic | 25.0% |
| ! | GCCGATATAAAAAAGAATAT+AGG | - | chr8_4:52975853-52975872 | Msa1332960:intron | 25.0% |
| ! | AATAGACAATAGGGTTAAAA+TGG | - | chr8_4:52976205-52976224 | Msa1332960:five_prime_UTR | 25.0% |
| !! | GAATTTGAGAATTTGTTGGT+TGG | + | chr8_4:52968178-52968197 | None:intergenic | 30.0% |
| ATCAATCAATCAATCTGACT+CGG | - | chr8_4:52968249-52968268 | Msa1332960:three_prime_UTR | 30.0% | |
| CTGAGTCAATAGAAGAAAAA+TGG | + | chr8_4:52968318-52968337 | None:intergenic | 30.0% | |
| !!! | GTGGTTTTGATTGGTTTTAA+CGG | - | chr8_4:52968596-52968615 | Msa1332960:CDS | 30.0% |
| AGAAGCTGTTCTAATTTATG+CGG | + | chr8_4:52968650-52968669 | None:intergenic | 30.0% | |
| TCTTGATATTGAGCATCATT+TGG | - | chr8_4:52968721-52968740 | Msa1332960:intron | 30.0% | |
| ! | AGCTGAATGGAACATTTTAT+CGG | - | chr8_4:52968988-52969007 | Msa1332960:intron | 30.0% |
| AATTAAGCGTAACACAAATG+AGG | - | chr8_4:52969078-52969097 | Msa1332960:CDS | 30.0% | |
| ! | GATAGTAGAAAAGATGGTTT+TGG | - | chr8_4:52969179-52969198 | Msa1332960:CDS | 30.0% |
| TAATTTGAATCCTCTCCATA+TGG | + | chr8_4:52969250-52969269 | None:intergenic | 30.0% | |
| ! | TAATGAGTTGGATAGAAATG+TGG | - | chr8_4:52969332-52969351 | Msa1332960:intron | 30.0% |
| CTTTCTTGCATAATCACAAA+AGG | - | chr8_4:52969521-52969540 | Msa1332960:CDS | 30.0% | |
| ! | ATAATGAAGCTTTTTACCAG+TGG | + | chr8_4:52969600-52969619 | None:intergenic | 30.0% |
| ! | AGTTCATCTAATCTAAAGCT+TGG | + | chr8_4:52969674-52969693 | None:intergenic | 30.0% |
| !! | TTTGATTTTGATACACAACC+CGG | + | chr8_4:52969720-52969739 | None:intergenic | 30.0% |
| !! | ACTTGAAAAAGCATTGAAAG+AGG | - | chr8_4:52969941-52969960 | Msa1332960:intron | 30.0% |
| AAACCTTAGAATCATATCTC+AGG | + | chr8_4:52970065-52970084 | None:intergenic | 30.0% | |
| ACTATCCATGTCAAATATGT+AGG | + | chr8_4:52970184-52970203 | None:intergenic | 30.0% | |
| ATATTTGACATGGATAGTGT+GGG | - | chr8_4:52970186-52970205 | Msa1332960:intron | 30.0% | |
| !! | ATCATCTTCCACTTTTATTC+TGG | - | chr8_4:52970466-52970485 | Msa1332960:intron | 30.0% |
| ATAAACTGCCAGAATAAAAG+TGG | + | chr8_4:52970477-52970496 | None:intergenic | 30.0% | |
| ATTTATCGTTATCGCTATGA+TGG | - | chr8_4:52970637-52970656 | Msa1332960:intron | 30.0% | |
| GGTTCTTTACTAGGAATAAT+TGG | - | chr8_4:52970775-52970794 | Msa1332960:intron | 30.0% | |
| ! | AAAATTTGCTTGTAACTGTG+AGG | + | chr8_4:52970820-52970839 | None:intergenic | 30.0% |
| ! | TCCAGCAATGATATTTTTCT+TGG | - | chr8_4:52970999-52971018 | Msa1332960:CDS | 30.0% |
| TCCAAGAAAAATATCATTGC+TGG | + | chr8_4:52971003-52971022 | None:intergenic | 30.0% | |
| ! | AAGCTTTATGTCACTATAGT+TGG | - | chr8_4:52971105-52971124 | Msa1332960:CDS | 30.0% |
| ! | AGCTTTATGTCACTATAGTT+GGG | - | chr8_4:52971106-52971125 | Msa1332960:CDS | 30.0% |
| ! | GTTTTCTCCTAAAGTTTTCT+TGG | - | chr8_4:52971219-52971238 | Msa1332960:intron | 30.0% |
| TTAAGATCCTCTCTGTTTAT+TGG | + | chr8_4:52971260-52971279 | None:intergenic | 30.0% | |
| ! | TATGCTAAATTTTCACAGAC+TGG | - | chr8_4:52971369-52971388 | Msa1332960:intron | 30.0% |
| !! | TTTGCTGCATTATTTTGTTG+TGG | - | chr8_4:52971863-52971882 | Msa1332960:intron | 30.0% |
| AGACAGTTTAAATGGGAAAA+AGG | + | chr8_4:52971991-52972010 | None:intergenic | 30.0% | |
| TACAGGTAGACAGTTTAAAT+GGG | + | chr8_4:52971998-52972017 | None:intergenic | 30.0% | |
| TTACAGGTAGACAGTTTAAA+TGG | + | chr8_4:52971999-52972018 | None:intergenic | 30.0% | |
| TATCTATGCTGTGAAACTTA+TGG | - | chr8_4:52972112-52972131 | Msa1332960:intron | 30.0% | |
| CGATGTTTATACTGTAATTG+TGG | + | chr8_4:52972434-52972453 | None:intergenic | 30.0% | |
| TTTGTAATTTCCTATGGAGT+AGG | - | chr8_4:52972472-52972491 | Msa1332960:intron | 30.0% | |
| AAACTCCGAGGTAAAATAAT+TGG | + | chr8_4:52972501-52972520 | None:intergenic | 30.0% | |
| ! | AATATTTTCTGCAACTTAGC+AGG | - | chr8_4:52972550-52972569 | Msa1332960:intron | 30.0% |
| !!! | TTAAGCAATTTTTTCACCTG+AGG | + | chr8_4:52972604-52972623 | None:intergenic | 30.0% |
| GGCAAGAAGTAGTAATTATT+GGG | - | chr8_4:52972629-52972648 | Msa1332960:intron | 30.0% | |
| GCAAGAAGTAGTAATTATTG+GGG | - | chr8_4:52972630-52972649 | Msa1332960:intron | 30.0% | |
| CAAGAAGTAGTAATTATTGG+GGG | - | chr8_4:52972631-52972650 | Msa1332960:intron | 30.0% | |
| !!! | GGTGCTATTTTAAAAGAAGT+GGG | - | chr8_4:52972778-52972797 | Msa1332960:intron | 30.0% |
| CAACTAAATATCCAGTGAAA+TGG | + | chr8_4:52972874-52972893 | None:intergenic | 30.0% | |
| ATTATGCATGTTCTTCAGAT+AGG | + | chr8_4:52973014-52973033 | None:intergenic | 30.0% | |
| AGGAAGAATGTAAAGAAACT+AGG | - | chr8_4:52973327-52973346 | Msa1332960:CDS | 30.0% | |
| TGTAGATTAAACGTGAATCT+AGG | + | chr8_4:52973414-52973433 | None:intergenic | 30.0% | |
| ! | TGCAGTTGTGTTTTTCTTTT+CGG | - | chr8_4:52973455-52973474 | Msa1332960:intron | 30.0% |
| CTGCTCAAATTAAGCTAAAT+AGG | - | chr8_4:52973552-52973571 | Msa1332960:intron | 30.0% | |
| TTGTACACCATAAATGTCAA+GGG | + | chr8_4:52973579-52973598 | None:intergenic | 30.0% | |
| TTTGTACACCATAAATGTCA+AGG | + | chr8_4:52973580-52973599 | None:intergenic | 30.0% | |
| ATGGTGTACAAAGACAATAT+TGG | - | chr8_4:52973588-52973607 | Msa1332960:intron | 30.0% | |
| GTACAAAGACAATATTGGTA+AGG | - | chr8_4:52973593-52973612 | Msa1332960:intron | 30.0% | |
| AAAGAAAAAGGAACAACTCT+AGG | - | chr8_4:52973706-52973725 | Msa1332960:CDS | 30.0% | |
| GATTATAGTTGACAAACTCT+AGG | - | chr8_4:52973763-52973782 | Msa1332960:CDS | 30.0% | |
| TGTAGATCCAAATCTTATGA+TGG | - | chr8_4:52974017-52974036 | Msa1332960:intron | 30.0% | |
| AATCTTCAACTCATATGTAC+TGG | + | chr8_4:52974144-52974163 | None:intergenic | 30.0% | |
| TTTCAACATGTAGATGATAG+AGG | - | chr8_4:52974190-52974209 | Msa1332960:CDS | 30.0% | |
| TCAATTCTGCTTAGAAAAAC+TGG | + | chr8_4:52974289-52974308 | None:intergenic | 30.0% | |
| GTAGACTGAACTAAATGAAA+TGG | + | chr8_4:52974498-52974517 | None:intergenic | 30.0% | |
| ! | TTTCATGCTGATTGTCTATT+TGG | - | chr8_4:52974535-52974554 | Msa1332960:intron | 30.0% |
| ! | AGTCCACTTTGATTTATCTT+GGG | - | chr8_4:52974589-52974608 | Msa1332960:intron | 30.0% |
| AAACCCAAGATAAATCAAAG+TGG | + | chr8_4:52974595-52974614 | None:intergenic | 30.0% | |
| TGAAACATAACTGTCAAACA+AGG | + | chr8_4:52974669-52974688 | None:intergenic | 30.0% | |
| ATGTTTCAGAAATACAGAGA+AGG | - | chr8_4:52974681-52974700 | Msa1332960:intron | 30.0% | |
| AATTCACAATAGGTCTTTCA+TGG | + | chr8_4:52974802-52974821 | None:intergenic | 30.0% | |
| ATGAAAGACCTATTGTGAAT+TGG | - | chr8_4:52974801-52974820 | Msa1332960:intron | 30.0% | |
| GTATTTGAAAATGGTCCAAA+TGG | + | chr8_4:52974848-52974867 | None:intergenic | 30.0% | |
| TAAAATTCGTGAAACATCAG+AGG | - | chr8_4:52975023-52975042 | Msa1332960:intron | 30.0% | |
| GTTACTTGTTTACCTGATTA+TGG | - | chr8_4:52975077-52975096 | Msa1332960:intron | 30.0% | |
| AGTAACAACAACTTACATTG+AGG | + | chr8_4:52975293-52975312 | None:intergenic | 30.0% | |
| AATATCTGAACTGTTCAAGA+AGG | + | chr8_4:52975446-52975465 | None:intergenic | 30.0% | |
| GAATAAGGTAACTTACTGTT+GGG | + | chr8_4:52975488-52975507 | None:intergenic | 30.0% | |
| TGAATAAGGTAACTTACTGT+TGG | + | chr8_4:52975489-52975508 | None:intergenic | 30.0% | |
| ! | TGTAATTTTCTTCTCATCTC+CGG | - | chr8_4:52975759-52975778 | Msa1332960:intron | 30.0% |
| GTTGAATAGAAACAAATTCC+CGG | - | chr8_4:52975910-52975929 | Msa1332960:CDS | 30.0% | |
| TAGTCAATGTTATGTTACTC+CGG | + | chr8_4:52975932-52975951 | None:intergenic | 30.0% | |
| TGACAATGAGTTATGACAAT+AGG | - | chr8_4:52976161-52976180 | Msa1332960:five_prime_UTR | 30.0% | |
| GACAATGAGTTATGACAATA+GGG | - | chr8_4:52976162-52976181 | Msa1332960:five_prime_UTR | 30.0% | |
| !! | AATTGACTCGTTTCAGGAAT+CGG | + | chr8_4:52968227-52968246 | None:intergenic | 35.0% |
| !! | TGATTGAATTGACTCGTTTC+AGG | + | chr8_4:52968233-52968252 | None:intergenic | 35.0% |
| !! | ACTCTTACTGTGCTTTTTGT+AGG | - | chr8_4:52968544-52968563 | Msa1332960:exon | 35.0% |
| AAAACCACATTCACTTCCAA+CGG | + | chr8_4:52968584-52968603 | None:intergenic | 35.0% | |
| !!! | GAAGTGAATGTGGTTTTGAT+TGG | - | chr8_4:52968587-52968606 | Msa1332960:CDS | 35.0% |
| !!! | TTGATTGGTTTTAACGGTGA+TGG | - | chr8_4:52968602-52968621 | Msa1332960:CDS | 35.0% |
| AAACAAGAAGGTCTATGAGT+AGG | + | chr8_4:52968686-52968705 | None:intergenic | 35.0% | |
| !! | GCTATTTTCATAAGCTATCC+TGG | + | chr8_4:52968902-52968921 | None:intergenic | 35.0% |
| TTGCTAAGACTTGATGGAAT+AGG | - | chr8_4:52969117-52969136 | Msa1332960:CDS | 35.0% | |
| ATGACAACATTAGAGAGAGT+TGG | - | chr8_4:52969147-52969166 | Msa1332960:CDS | 35.0% | |
| TGACAACATTAGAGAGAGTT+GGG | - | chr8_4:52969148-52969167 | Msa1332960:CDS | 35.0% | |
| ATTAAGGAGAGTAGACCATA+TGG | - | chr8_4:52969232-52969251 | Msa1332960:intron | 35.0% | |
| GAGAGGATTCAAATTACTAG+AGG | - | chr8_4:52969254-52969273 | Msa1332960:intron | 35.0% | |
| AGGATTCAAATTACTAGAGG+TGG | - | chr8_4:52969257-52969276 | Msa1332960:intron | 35.0% | |
| ATTCAAATTACTAGAGGTGG+AGG | - | chr8_4:52969260-52969279 | Msa1332960:intron | 35.0% | |
| TGTTTATCCAAACAAGACAC+TGG | - | chr8_4:52969496-52969515 | Msa1332960:CDS | 35.0% | |
| AGCAGTTTAAGAAAGTAACG+AGG | + | chr8_4:52969551-52969570 | None:intergenic | 35.0% | |
| CAGACAAAGGGATATTTACA+TGG | + | chr8_4:52969854-52969873 | None:intergenic | 35.0% | |
| ATTGAAATCTTACCATAGGC+CGG | - | chr8_4:52969900-52969919 | Msa1332960:intron | 35.0% | |
| !!! | TTTTCAAGTGCTATCAGTTC+AGG | + | chr8_4:52969930-52969949 | None:intergenic | 35.0% |
| !! | AAAAGCATTGAAAGAGGCAA+TGG | - | chr8_4:52969947-52969966 | Msa1332960:intron | 35.0% |
| CTTAGAATCATATCTCAGGA+TGG | + | chr8_4:52970061-52970080 | None:intergenic | 35.0% | |
| CATCCTGAGATATGATTCTA+AGG | - | chr8_4:52970059-52970078 | Msa1332960:intron | 35.0% | |
| ! | TGCAACTTACAGTCTGATTT+TGG | - | chr8_4:52970093-52970112 | Msa1332960:intron | 35.0% |
| ! | ACTTACAGTCTGATTTTGGA+AGG | - | chr8_4:52970097-52970116 | Msa1332960:intron | 35.0% |
| !! | CTTACAGTCTGATTTTGGAA+GGG | - | chr8_4:52970098-52970117 | Msa1332960:intron | 35.0% |
| GTTGCTTCAACTTCAAATAG+AGG | + | chr8_4:52970129-52970148 | None:intergenic | 35.0% | |
| ! | GAGTACAGCATTTGAAATAC+TGG | + | chr8_4:52970162-52970181 | None:intergenic | 35.0% |
| GTACTCCTACATATTTGACA+TGG | - | chr8_4:52970176-52970195 | Msa1332960:intron | 35.0% | |
| CATATTTGACATGGATAGTG+TGG | - | chr8_4:52970185-52970204 | Msa1332960:intron | 35.0% | |
| TGTGACAACTTACAAGCAAT+TGG | + | chr8_4:52970362-52970381 | None:intergenic | 35.0% | |
| GAAGATGATACTAAACAAGC+AGG | + | chr8_4:52970455-52970474 | None:intergenic | 35.0% | |
| AGACTAGATCCTAAACTCAA+GGG | - | chr8_4:52970535-52970554 | Msa1332960:intron | 35.0% | |
| AGATCTATTCCCTTGAGTTT+AGG | + | chr8_4:52970547-52970566 | None:intergenic | 35.0% | |
| AAAAATTCCTGAGCTAACTG+AGG | - | chr8_4:52970585-52970604 | Msa1332960:intron | 35.0% | |
| ! | AGAGTGTTATCAATTCTTGG+AGG | - | chr8_4:52970754-52970773 | Msa1332960:intron | 35.0% |
| ATTCTTGGAGGTTCTTTACT+AGG | - | chr8_4:52970766-52970785 | Msa1332960:intron | 35.0% | |
| TCAACCTTACCATAAGTACA+GGG | + | chr8_4:52970897-52970916 | None:intergenic | 35.0% | |
| TTCAACCTTACCATAAGTAC+AGG | + | chr8_4:52970898-52970917 | None:intergenic | 35.0% | |
| AACATTTCGTAATCTTGGCA+GGG | + | chr8_4:52970949-52970968 | None:intergenic | 35.0% | |
| CCAAGATTACGAAATGTTGT+GGG | - | chr8_4:52970951-52970970 | Msa1332960:CDS | 35.0% | |
| ATGTTATAGCACCTGATGTT+AGG | - | chr8_4:52971057-52971076 | Msa1332960:CDS | 35.0% | |
| ACATTACGTTACCTAACATC+AGG | + | chr8_4:52971071-52971090 | None:intergenic | 35.0% | |
| AAAAGGCCCAAGAAAACTTT+AGG | + | chr8_4:52971229-52971248 | None:intergenic | 35.0% | |
| ! | AAGTTTTCTTGGGCCTTTTA+TGG | - | chr8_4:52971230-52971249 | Msa1332960:intron | 35.0% |
| ! | AGTTTTCTTGGGCCTTTTAT+GGG | - | chr8_4:52971231-52971250 | Msa1332960:intron | 35.0% |
| CTTCTATGGTAGAACTTCAT+TGG | + | chr8_4:52971286-52971305 | None:intergenic | 35.0% | |
| ATGAAGTTCTACCATAGAAG+AGG | - | chr8_4:52971286-52971305 | Msa1332960:intron | 35.0% | |
| TGAAGTTCTACCATAGAAGA+GGG | - | chr8_4:52971287-52971306 | Msa1332960:intron | 35.0% | |
| GGTAGGCTTGTAAATGATTT+GGG | - | chr8_4:52971322-52971341 | Msa1332960:intron | 35.0% | |
| ATGAGTATTAGAGGAAAGGA+GGG | - | chr8_4:52971445-52971464 | Msa1332960:intron | 35.0% | |
| TAGAAGGTAGGCAATCATTT+GGG | - | chr8_4:52971474-52971493 | Msa1332960:intron | 35.0% | |
| ATCTCTGATAACAATGGCAA+GGG | + | chr8_4:52971571-52971590 | None:intergenic | 35.0% | |
| TGACACATCTCTGATAACAA+TGG | + | chr8_4:52971577-52971596 | None:intergenic | 35.0% | |
| TCTTCCATTACCCTTTCAAT+TGG | - | chr8_4:52971647-52971666 | Msa1332960:CDS | 35.0% | |
| GAAAGACAGTCCAATTGAAA+GGG | + | chr8_4:52971660-52971679 | None:intergenic | 35.0% | |
| TGAAAGACAGTCCAATTGAA+AGG | + | chr8_4:52971661-52971680 | None:intergenic | 35.0% | |
| CAATTGGACTGTCTTTCATT+TGG | - | chr8_4:52971663-52971682 | Msa1332960:CDS | 35.0% | |
| ! | GTTACTCATTTTCCAAGGTT+CGG | + | chr8_4:52971734-52971753 | None:intergenic | 35.0% |
| ! | TGATGGTTACTCATTTTCCA+AGG | + | chr8_4:52971739-52971758 | None:intergenic | 35.0% |
| AGATAGATGACTGGACAAAA+AGG | + | chr8_4:52971830-52971849 | None:intergenic | 35.0% | |
| !! | CTGCATTATTTTGTTGTGGT+TGG | - | chr8_4:52971867-52971886 | Msa1332960:CDS | 35.0% |
| ATAAGATCAGATGTGCCATA+TGG | + | chr8_4:52971917-52971936 | None:intergenic | 35.0% | |
| ! | AGAACCCATATTTCTGTATG+TGG | - | chr8_4:52972046-52972065 | Msa1332960:intron | 35.0% |
| ! | GAACCCATATTTCTGTATGT+GGG | - | chr8_4:52972047-52972066 | Msa1332960:intron | 35.0% |
| GATCCCACATACAGAAATAT+GGG | + | chr8_4:52972053-52972072 | None:intergenic | 35.0% | |
| !! | ATCATATTGGGGCATTGATA+GGG | + | chr8_4:52972075-52972094 | None:intergenic | 35.0% |
| !! | AATCATATTGGGGCATTGAT+AGG | + | chr8_4:52972076-52972095 | None:intergenic | 35.0% |
| GCCCCAATATGATTGTAATA+TGG | - | chr8_4:52972082-52972101 | Msa1332960:intron | 35.0% | |
| TGGTTCTTGGGTGAAAAATA+AGG | + | chr8_4:52972149-52972168 | None:intergenic | 35.0% | |
| ATGAGTTAGCAATGGTTCTT+GGG | + | chr8_4:52972161-52972180 | None:intergenic | 35.0% | |
| TTGCATGTTAGATGCTAAAC+TGG | + | chr8_4:52972230-52972249 | None:intergenic | 35.0% | |
| CAGAGGTTTGTAATTTCCTA+TGG | - | chr8_4:52972466-52972485 | Msa1332960:intron | 35.0% | |
| ! | CAGACAATTTTTAAACTCCG+AGG | + | chr8_4:52972513-52972532 | None:intergenic | 35.0% |
| CTCGGAGTTTAAAAATTGTC+TGG | - | chr8_4:52972511-52972530 | Msa1332960:intron | 35.0% | |
| GGGCAAGAAGTAGTAATTAT+TGG | - | chr8_4:52972628-52972647 | Msa1332960:intron | 35.0% | |
| TCTTGGTATGAACATGGAAA+CGG | + | chr8_4:52972747-52972766 | None:intergenic | 35.0% | |
| GATAAGTCTTGGTATGAACA+TGG | + | chr8_4:52972753-52972772 | None:intergenic | 35.0% | |
| TGTTCATACCAAGACTTATC+TGG | - | chr8_4:52972753-52972772 | Msa1332960:intron | 35.0% | |
| !!! | CGGTGCTATTTTAAAAGAAG+TGG | - | chr8_4:52972777-52972796 | Msa1332960:intron | 35.0% |
| ! | ATAATTTTACACCGGCAATG+TGG | - | chr8_4:52972842-52972861 | Msa1332960:intron | 35.0% |
| AATTGAATACTTTCCGGTCA+TGG | - | chr8_4:52972966-52972985 | Msa1332960:intron | 35.0% | |
| AATATTTCCTCCGACAGAAT+TGG | - | chr8_4:52973217-52973236 | Msa1332960:intron | 35.0% | |
| ATTCATCCATCCAATTCTGT+CGG | + | chr8_4:52973230-52973249 | None:intergenic | 35.0% | |
| AATTGGATGGATGAATCTGA+GGG | - | chr8_4:52973234-52973253 | Msa1332960:intron | 35.0% | |
| TACTTAAGCATAAGCCTCTT+TGG | - | chr8_4:52973271-52973290 | Msa1332960:CDS | 35.0% | |
| AAGTTATACGATGACCAAAG+AGG | + | chr8_4:52973288-52973307 | None:intergenic | 35.0% | |
| ACTACTCTTGTTCCAAAAGT+TGG | + | chr8_4:52973363-52973382 | None:intergenic | 35.0% | |
| TGAATCTAGGAAAGAGATAG+TGG | + | chr8_4:52973401-52973420 | None:intergenic | 35.0% | |
| AATAGGACCCTTGACATTTA+TGG | - | chr8_4:52973569-52973588 | Msa1332960:intron | 35.0% | |
| ATATTGGTAAGGTAGTACTG+TGG | - | chr8_4:52973604-52973623 | Msa1332960:intron | 35.0% | |
| TATTGGTAAGGTAGTACTGT+GGG | - | chr8_4:52973605-52973624 | Msa1332960:intron | 35.0% | |
| AGATCCAAATCTTATGATGG+AGG | - | chr8_4:52974020-52974039 | Msa1332960:intron | 35.0% | |
| ! | ATGAAAAGATTCCTTTGAGG+TGG | - | chr8_4:52974097-52974116 | Msa1332960:CDS | 35.0% |
| !! | TGAAAAGATTCCTTTGAGGT+GGG | - | chr8_4:52974098-52974117 | Msa1332960:CDS | 35.0% |
| AGGTGGGTGAATATGATATA+CGG | - | chr8_4:52974114-52974133 | Msa1332960:CDS | 35.0% | |
| AACATGTAGATGATAGAGGA+AGG | - | chr8_4:52974194-52974213 | Msa1332960:CDS | 35.0% | |
| ! | TCTTTTTCCTGTTGAGAGAA+GGG | + | chr8_4:52974369-52974388 | None:intergenic | 35.0% |
| ! | TTCTTTTTCCTGTTGAGAGA+AGG | + | chr8_4:52974370-52974389 | None:intergenic | 35.0% |
| ! | ATAAATCAAAGTGGACTCAG+TGG | + | chr8_4:52974586-52974605 | None:intergenic | 35.0% |
| ! | GAGTCCACTTTGATTTATCT+TGG | - | chr8_4:52974588-52974607 | Msa1332960:intron | 35.0% |
| GAGTAAACAGACAACTAATG+AGG | + | chr8_4:52974618-52974637 | None:intergenic | 35.0% | |
| TCAAGCACAACGTCATATAT+TGG | - | chr8_4:52974718-52974737 | Msa1332960:intron | 35.0% | |
| TTTAAGTGCACCATATGTGA+AGG | - | chr8_4:52974766-52974785 | Msa1332960:intron | 35.0% | |
| !! | ACCTATTGTGAATTGGCTTT+GGG | - | chr8_4:52974808-52974827 | Msa1332960:intron | 35.0% |
| AAATGGTTCAGGCAAATTAG+TGG | + | chr8_4:52975238-52975257 | None:intergenic | 35.0% | |
| TCAACTAATTCGTGTGGAAA+TGG | + | chr8_4:52975255-52975274 | None:intergenic | 35.0% | |
| ATTGAAGTTTCTGATCTCTC+TGG | - | chr8_4:52975315-52975334 | Msa1332960:intron | 35.0% | |
| TTGAAGTTTCTGATCTCTCT+GGG | - | chr8_4:52975316-52975335 | Msa1332960:intron | 35.0% | |
| TCTTCTCAAACGTACATCTA+TGG | - | chr8_4:52975700-52975719 | Msa1332960:CDS | 35.0% | |
| CTTCTCAAACGTACATCTAT+GGG | - | chr8_4:52975701-52975720 | Msa1332960:CDS | 35.0% | |
| TTCTCAAACGTACATCTATG+GGG | - | chr8_4:52975702-52975721 | Msa1332960:CDS | 35.0% | |
| AGTCAATGTTATGTTACTCC+GGG | + | chr8_4:52975931-52975950 | None:intergenic | 35.0% | |
| ! | GGAGTAACATAACATTGACT+AGG | - | chr8_4:52975931-52975950 | Msa1332960:CDS | 35.0% |
| !! | GCATGTTTTAGGCGTTTAAA+TGG | - | chr8_4:52976080-52976099 | Msa1332960:five_prime_UTR | 35.0% |
| GGCGTTTAAATGGAATGTTT+AGG | - | chr8_4:52976090-52976109 | Msa1332960:five_prime_UTR | 35.0% | |
| CAATAGGGTTAAAATGGTGT+TGG | - | chr8_4:52976211-52976230 | Msa1332960:five_prime_UTR | 35.0% | |
| ACTTCCAACGGAACTTGAAA+CGG | + | chr8_4:52968572-52968591 | None:intergenic | 40.0% | |
| !!! | ATTGGTTTTAACGGTGATGG+AGG | - | chr8_4:52968605-52968624 | Msa1332960:CDS | 40.0% |
| ! | ACCTTCTTGTTTAGAGACTG+AGG | - | chr8_4:52968694-52968713 | Msa1332960:intron | 40.0% |
| TCCTCAGTCTCTAAACAAGA+AGG | + | chr8_4:52968698-52968717 | None:intergenic | 40.0% | |
| TCATGAGATTCATGCTTTGC+TGG | - | chr8_4:52968811-52968830 | Msa1332960:intron | 40.0% | |
| CATGAGATTCATGCTTTGCT+GGG | - | chr8_4:52968812-52968831 | Msa1332960:intron | 40.0% | |
| CTGGAGAGCTTAGGAAAATA+AGG | + | chr8_4:52968883-52968902 | None:intergenic | 40.0% | |
| !! | CTTATTTTCCTAAGCTCTCC+AGG | - | chr8_4:52968881-52968900 | Msa1332960:CDS | 40.0% |
| ATGAAAGTAGTAGGGACTCA+AGG | - | chr8_4:52968933-52968952 | Msa1332960:CDS | 40.0% | |
| TTATCGGACAGCTATAAGAC+AGG | - | chr8_4:52969004-52969023 | Msa1332960:intron | 40.0% | |
| ATAAGACAGGCGATGTTGTA+CGG | - | chr8_4:52969017-52969036 | Msa1332960:intron | 40.0% | |
| CACAAATGAGGATGTTGTGT+TGG | - | chr8_4:52969090-52969109 | Msa1332960:CDS | 40.0% | |
| ! | GGATGTTTGCTAAGACTTGA+TGG | - | chr8_4:52969111-52969130 | Msa1332960:CDS | 40.0% |
| GACAACATTAGAGAGAGTTG+GGG | - | chr8_4:52969149-52969168 | Msa1332960:CDS | 40.0% | |
| !! | AGCACCGATAGTAGAAAAGA+TGG | - | chr8_4:52969173-52969192 | Msa1332960:CDS | 40.0% |
| TGGATCAAACGAGGCTATAA+TGG | + | chr8_4:52969367-52969386 | None:intergenic | 40.0% | |
| AAGCGTTATCCCACTAAGTA+GGG | + | chr8_4:52969399-52969418 | None:intergenic | 40.0% | |
| ! | GAAAGAACCAGTGTCTTGTT+TGG | + | chr8_4:52969506-52969525 | None:intergenic | 40.0% |
| AGAATCATATCTCAGGATGG+AGG | + | chr8_4:52970058-52970077 | None:intergenic | 40.0% | |
| ATGAATATTGCACTTGGCAC+TGG | + | chr8_4:52970237-52970256 | None:intergenic | 40.0% | |
| CAACTAAACGCACTACATGT+TGG | + | chr8_4:52970282-52970301 | None:intergenic | 40.0% | |
| GAGACTAGATCCTAAACTCA+AGG | - | chr8_4:52970534-52970553 | Msa1332960:intron | 40.0% | |
| ATATCTTCCTCAGTTAGCTC+AGG | + | chr8_4:52970595-52970614 | None:intergenic | 40.0% | |
| TATCGTTATCGCTATGATGG+TGG | - | chr8_4:52970640-52970659 | Msa1332960:intron | 40.0% | |
| CAACATTTCGTAATCTTGGC+AGG | + | chr8_4:52970950-52970969 | None:intergenic | 40.0% | |
| GCCAAGATTACGAAATGTTG+TGG | - | chr8_4:52970950-52970969 | Msa1332960:CDS | 40.0% | |
| CCCACAACATTTCGTAATCT+TGG | + | chr8_4:52970954-52970973 | None:intergenic | 40.0% | |
| TGCTTCTTTGGTATCAACCA+CGG | - | chr8_4:52971028-52971047 | Msa1332960:CDS | 40.0% | |
| GTTTATTGGAGGCCCATAAA+AGG | + | chr8_4:52971246-52971265 | None:intergenic | 40.0% | |
| AGATCCTCTCTGTTTATTGG+AGG | + | chr8_4:52971257-52971276 | None:intergenic | 40.0% | |
| TCTACCATAGAAGAGGGAAA+AGG | - | chr8_4:52971293-52971312 | Msa1332960:intron | 40.0% | |
| ! | CATTCCTTTTCCCTCTTCTA+TGG | + | chr8_4:52971300-52971319 | None:intergenic | 40.0% |
| TAGAAGAGGGAAAAGGAATG+AGG | - | chr8_4:52971300-52971319 | Msa1332960:intron | 40.0% | |
| AGAAGAGGGAAAAGGAATGA+GGG | - | chr8_4:52971301-52971320 | Msa1332960:intron | 40.0% | |
| GGGTAGGCTTGTAAATGATT+TGG | - | chr8_4:52971321-52971340 | Msa1332960:intron | 40.0% | |
| GGACATGAGTATTAGAGGAA+AGG | - | chr8_4:52971441-52971460 | Msa1332960:intron | 40.0% | |
| CATGAGTATTAGAGGAAAGG+AGG | - | chr8_4:52971444-52971463 | Msa1332960:intron | 40.0% | |
| GTAGAAGGTAGGCAATCATT+TGG | - | chr8_4:52971473-52971492 | Msa1332960:intron | 40.0% | |
| CATCTCTGATAACAATGGCA+AGG | + | chr8_4:52971572-52971591 | None:intergenic | 40.0% | |
| CAGTCCAATTGAAAGGGTAA+TGG | + | chr8_4:52971654-52971673 | None:intergenic | 40.0% | |
| TAGTTTCTCAGCTTTCGCTT+GGG | - | chr8_4:52971775-52971794 | Msa1332960:intron | 40.0% | |
| AGAATGGCAAGATAGATGAC+TGG | + | chr8_4:52971839-52971858 | None:intergenic | 40.0% | |
| GCCATATGGCATTCAACATT+GGG | + | chr8_4:52971903-52971922 | None:intergenic | 40.0% | |
| TGCCATATGGCATTCAACAT+TGG | + | chr8_4:52971904-52971923 | None:intergenic | 40.0% | |
| GGATCCCACATACAGAAATA+TGG | + | chr8_4:52972054-52972073 | None:intergenic | 40.0% | |
| GATGAGTTAGCAATGGTTCT+TGG | + | chr8_4:52972162-52972181 | None:intergenic | 40.0% | |
| AAAAGGGGATGAGTTAGCAA+TGG | + | chr8_4:52972169-52972188 | None:intergenic | 40.0% | |
| !! | GGCGACCAATTATTTTACCT+CGG | - | chr8_4:52972493-52972512 | Msa1332960:intron | 40.0% |
| CATACCAAGACTTATCTGGA+CGG | - | chr8_4:52972757-52972776 | Msa1332960:intron | 40.0% | |
| GAATTGGATGGATGAATCTG+AGG | - | chr8_4:52973233-52973252 | Msa1332960:intron | 40.0% | |
| ATTGGATGGATGAATCTGAG+GGG | - | chr8_4:52973235-52973254 | Msa1332960:intron | 40.0% | |
| ! | GGAGATCTTCAACCAACTTT+TGG | - | chr8_4:52973348-52973367 | Msa1332960:CDS | 40.0% |
| !! | AGTTGACAAACTCTAGGACT+TGG | - | chr8_4:52973769-52973788 | Msa1332960:CDS | 40.0% |
| GTCACTTGGTTGAAATGCTT+TGG | - | chr8_4:52973859-52973878 | Msa1332960:intron | 40.0% | |
| GGTTGAAATGCTTTGGTATG+AGG | - | chr8_4:52973866-52973885 | Msa1332960:intron | 40.0% | |
| !! | GTGCAGTTTTGTGCTATCAT+TGG | - | chr8_4:52973990-52974009 | Msa1332960:intron | 40.0% |
| TCGTCCTCCATCATAAGATT+TGG | + | chr8_4:52974027-52974046 | None:intergenic | 40.0% | |
| ! | TATGATGGAGGACGAAAGTA+TGG | - | chr8_4:52974032-52974051 | Msa1332960:intron | 40.0% |
| ATCATATTCACCCACCTCAA+AGG | + | chr8_4:52974111-52974130 | None:intergenic | 40.0% | |
| TATGACGTTGTGCTTGAGAT+GGG | + | chr8_4:52974715-52974734 | None:intergenic | 40.0% | |
| ATATGACGTTGTGCTTGAGA+TGG | + | chr8_4:52974716-52974735 | None:intergenic | 40.0% | |
| ACATGAGAAGCCTTCACATA+TGG | + | chr8_4:52974779-52974798 | None:intergenic | 40.0% | |
| ! | GACCTATTGTGAATTGGCTT+TGG | - | chr8_4:52974807-52974826 | Msa1332960:intron | 40.0% |
| CACTTACCAATGCAACATCA+CGG | + | chr8_4:52974892-52974911 | None:intergenic | 40.0% | |
| GAACTCAATATATGCACGTG+TGG | - | chr8_4:52974987-52975006 | Msa1332960:intron | 40.0% | |
| GTTTACCTGATTATGGATCC+CGG | - | chr8_4:52975084-52975103 | Msa1332960:intron | 40.0% | |
| AGAAATCAACCACTGAACTG+TGG | - | chr8_4:52975190-52975209 | Msa1332960:intron | 40.0% | |
| AATTCGTGTGGAAATGGTTC+AGG | + | chr8_4:52975249-52975268 | None:intergenic | 40.0% | |
| AAACGCTCAACTAATTCGTG+TGG | + | chr8_4:52975261-52975280 | None:intergenic | 40.0% | |
| ACACGAATTAGTTGAGCGTT+TGG | - | chr8_4:52975260-52975279 | Msa1332960:intron | 40.0% | |
| TATCAACAAGATGCTCCTCA+AGG | + | chr8_4:52975387-52975406 | None:intergenic | 40.0% | |
| AACTTACTGTTGGGTGAACA+TGG | + | chr8_4:52975479-52975498 | None:intergenic | 40.0% | |
| TCTCAAACGTACATCTATGG+GGG | - | chr8_4:52975703-52975722 | Msa1332960:CDS | 40.0% | |
| ! | TGATAAGGCTTCTTGTTTGC+TGG | + | chr8_4:52975807-52975826 | None:intergenic | 40.0% |
| ! | TTTTTATATCGGCATGGCAG+TGG | + | chr8_4:52975846-52975865 | None:intergenic | 40.0% |
| ! | TTTTGTAGGTTCTACCAGCA+GGG | - | chr8_4:52975961-52975980 | Msa1332960:CDS | 40.0% |
| AGTTTCGCTAAATCTGCTTC+AGG | + | chr8_4:52976119-52976138 | None:intergenic | 40.0% | |
| ATGAGTGTGATGATCGAACG+AGG | + | chr8_4:52968290-52968309 | None:intergenic | 45.0% | |
| CAACCCTTCAAGAGAGAATC+CGG | - | chr8_4:52968353-52968372 | Msa1332960:three_prime_UTR | 45.0% | |
| TGACCGGATTCTCTCTTGAA+GGG | + | chr8_4:52968359-52968378 | None:intergenic | 45.0% | |
| ! | AGAGAGATGAGGTACTACCT+CGG | + | chr8_4:52968462-52968481 | None:intergenic | 45.0% |
| AGTTCCGTTGGAAGTGAATG+TGG | - | chr8_4:52968577-52968596 | Msa1332960:CDS | 45.0% | |
| TAAGCTATCCTGGAGAGCTT+AGG | + | chr8_4:52968892-52968911 | None:intergenic | 45.0% | |
| TAAAGTACGCGCAAGCTGAA+TGG | - | chr8_4:52968975-52968994 | Msa1332960:intron | 45.0% | |
| TAAGACAGGCGATGTTGTAC+GGG | - | chr8_4:52969018-52969037 | Msa1332960:intron | 45.0% | |
| TCGGTTACATGGATCAAACG+AGG | + | chr8_4:52969376-52969395 | None:intergenic | 45.0% | |
| ACTAAGTAGGGTCGGTTACA+TGG | + | chr8_4:52969387-52969406 | None:intergenic | 45.0% | |
| ATGTAACCGACCCTACTTAG+TGG | - | chr8_4:52969386-52969405 | Msa1332960:intron | 45.0% | |
| TGTAACCGACCCTACTTAGT+GGG | - | chr8_4:52969387-52969406 | Msa1332960:intron | 45.0% | |
| GTTATCCCACTAAGTAGGGT+CGG | + | chr8_4:52969395-52969414 | None:intergenic | 45.0% | |
| CAAGCGTTATCCCACTAAGT+AGG | + | chr8_4:52969400-52969419 | None:intergenic | 45.0% | |
| CTACTTAGTGGGATAACGCT+TGG | - | chr8_4:52969398-52969417 | Msa1332960:intron | 45.0% | |
| AGGATGGAGGCTATAACTGT+TGG | + | chr8_4:52970045-52970064 | None:intergenic | 45.0% | |
| !! | ACAGTCTGATTTTGGAAGGG+AGG | - | chr8_4:52970101-52970120 | Msa1332960:intron | 45.0% |
| TGAAGTTGAAGCAACAGCTG+TGG | - | chr8_4:52970134-52970153 | Msa1332960:intron | 45.0% | |
| GGGATCTTCTGTTACAGAGA+TGG | - | chr8_4:52970206-52970225 | Msa1332960:intron | 45.0% | |
| AACTCAAGTTTGGCTGAGCT+CGG | - | chr8_4:52970669-52970688 | Msa1332960:intron | 45.0% | |
| TGGTCATTGACCTTTCAGCA+GGG | - | chr8_4:52970871-52970890 | Msa1332960:intron | 45.0% | |
| TGGTAAGGTTGAAGCTGAAG+AGG | - | chr8_4:52970905-52970924 | Msa1332960:intron | 45.0% | |
| GGTAAGGTTGAAGCTGAAGA+GGG | - | chr8_4:52970906-52970925 | Msa1332960:intron | 45.0% | |
| ! | TCTTGGACAGCTTGCTTCTT+TGG | - | chr8_4:52971016-52971035 | Msa1332960:CDS | 45.0% |
| TTCTTTGGTATCAACCACGG+TGG | - | chr8_4:52971031-52971050 | Msa1332960:CDS | 45.0% | |
| TGCTATAACATGTTCCACCG+TGG | + | chr8_4:52971048-52971067 | None:intergenic | 45.0% | |
| CTACAAGGTCAAGGGTTCAT+TGG | - | chr8_4:52971140-52971159 | Msa1332960:CDS | 45.0% | |
| GAAACGTAGCAGCAAGATAG+AGG | - | chr8_4:52971391-52971410 | Msa1332960:intron | 45.0% | |
| AGCAGCAAGATAGAGGAGAA+AGG | - | chr8_4:52971398-52971417 | Msa1332960:intron | 45.0% | |
| GCAGCAAGATAGAGGAGAAA+GGG | - | chr8_4:52971399-52971418 | Msa1332960:intron | 45.0% | |
| AAGGGATGCTGGAATCATTG+AGG | - | chr8_4:52971417-52971436 | Msa1332960:intron | 45.0% | |
| AGGGATGCTGGAATCATTGA+GGG | - | chr8_4:52971418-52971437 | Msa1332960:intron | 45.0% | |
| ATTAGAGGAAAGGAGGGTTG+TGG | - | chr8_4:52971451-52971470 | Msa1332960:intron | 45.0% | |
| AAGGTAGGCAATCATTTGGG+TGG | - | chr8_4:52971477-52971496 | Msa1332960:intron | 45.0% | |
| GTAGTTTCTCAGCTTTCGCT+TGG | - | chr8_4:52971774-52971793 | Msa1332960:intron | 45.0% | |
| AGTTTCTCAGCTTTCGCTTG+GGG | - | chr8_4:52971776-52971795 | Msa1332960:intron | 45.0% | |
| GCCCAATGTTGAATGCCATA+TGG | - | chr8_4:52971899-52971918 | Msa1332960:CDS | 45.0% | |
| CATCGACGAAATTAAGGCAG+AGG | - | chr8_4:52972449-52972468 | Msa1332960:intron | 45.0% | |
| TAATTGGTCGCCTACTCCAT+AGG | + | chr8_4:52972485-52972504 | None:intergenic | 45.0% | |
| CCATGAGAAGCTGTCAATTG+CGG | - | chr8_4:52972672-52972691 | Msa1332960:intron | 45.0% | |
| CTGCAGGAAACCAAGAATGA+TGG | - | chr8_4:52972721-52972740 | Msa1332960:intron | 45.0% | |
| ATGGAAACGGCCATCATTCT+TGG | + | chr8_4:52972734-52972753 | None:intergenic | 45.0% | |
| AATGGAAGAGACCACATTGC+CGG | + | chr8_4:52972856-52972875 | None:intergenic | 45.0% | |
| TGTGGTCTCTTCCATTTCAC+TGG | - | chr8_4:52972860-52972879 | Msa1332960:intron | 45.0% | |
| ATCATGAGCAGTACCATGAC+CGG | + | chr8_4:52972982-52973001 | None:intergenic | 45.0% | |
| ACTTGCAACCACCTTTGAAC+AGG | - | chr8_4:52973125-52973144 | Msa1332960:intron | 45.0% | |
| AACCACCTTTGAACAGGAGA+TGG | - | chr8_4:52973131-52973150 | Msa1332960:intron | 45.0% | |
| TTCCATCTCCTGTTCAAAGG+TGG | + | chr8_4:52973136-52973155 | None:intergenic | 45.0% | |
| ACGTTCCATCTCCTGTTCAA+AGG | + | chr8_4:52973139-52973158 | None:intergenic | 45.0% | |
| TGCTGCTGGATTGCTTGAAA+TGG | - | chr8_4:52973173-52973192 | Msa1332960:intron | 45.0% | |
| TTTCCTCCGACAGAATTGGA+TGG | - | chr8_4:52973221-52973240 | Msa1332960:intron | 45.0% | |
| ! | AGGTAGTACTGTGGGCTATT+CGG | - | chr8_4:52973613-52973632 | Msa1332960:intron | 45.0% |
| ! | GGGAAGGCATATGTCATAGT+CGG | + | chr8_4:52974349-52974368 | None:intergenic | 45.0% |
| TTTCCTGTTGAGAGAAGGGA+AGG | + | chr8_4:52974365-52974384 | None:intergenic | 45.0% | |
| GCACAACGTCATATATTGGC+TGG | - | chr8_4:52974722-52974741 | Msa1332960:intron | 45.0% | |
| GCCCAAAGCCAATTCACAAT+AGG | + | chr8_4:52974812-52974831 | None:intergenic | 45.0% | |
| TGGTCCAAATGGATGACAAC+CGG | + | chr8_4:52974837-52974856 | None:intergenic | 45.0% | |
| AATGCTCCGTGATGTTGCAT+TGG | - | chr8_4:52974883-52974902 | Msa1332960:intron | 45.0% | |
| ATTGACCGGGATCCATAATC+AGG | + | chr8_4:52975092-52975111 | None:intergenic | 45.0% | |
| GATACTCTGCTGCAAAACCT+TGG | + | chr8_4:52975131-52975150 | None:intergenic | 45.0% | |
| GAGTATCTGAAAACTCCCCT+TGG | - | chr8_4:52975144-52975163 | Msa1332960:intron | 45.0% | |
| TTCTCCTTCTTTCCCTTCAC+AGG | + | chr8_4:52975174-52975193 | None:intergenic | 45.0% | |
| ATCAACCACTGAACTGTGGT+TGG | - | chr8_4:52975194-52975213 | Msa1332960:intron | 45.0% | |
| ATATGTTTACCAGGGCCTTG+AGG | - | chr8_4:52975369-52975388 | Msa1332960:intron | 45.0% | |
| !!! | ACCATGTTTTGACGAGTGAG+AGG | - | chr8_4:52975632-52975651 | Msa1332960:CDS | 45.0% |
| !!! | CCATGTTTTGACGAGTGAGA+GGG | - | chr8_4:52975633-52975652 | Msa1332960:CDS | 45.0% |
| ! | ACGTTTGAGAAGAGTGCACA+GGG | + | chr8_4:52975693-52975712 | None:intergenic | 45.0% |
| ! | TACGTTTGAGAAGAGTGCAC+AGG | + | chr8_4:52975694-52975713 | None:intergenic | 45.0% |
| ! | TATGGGGGAATACTGATTGC+TGG | - | chr8_4:52975718-52975737 | Msa1332960:CDS | 45.0% |
| !! | CTTCTTGTTTGCTGGCTTCA+TGG | + | chr8_4:52975799-52975818 | None:intergenic | 45.0% |
| ! | ACAAGAAGCCTTATCACACC+AGG | - | chr8_4:52975811-52975830 | Msa1332960:intron | 45.0% |
| GAATGCATAGCGATCAATGC+AGG | - | chr8_4:52975884-52975903 | Msa1332960:CDS | 45.0% | |
| ! | GACTAGGCTGTGTCTTTTGT+AGG | - | chr8_4:52975947-52975966 | Msa1332960:CDS | 45.0% |
| ! | CTTTTGTAGGTTCTACCAGC+AGG | - | chr8_4:52975960-52975979 | Msa1332960:CDS | 45.0% |
| TTTGTAGGTTCTACCAGCAG+GGG | - | chr8_4:52975962-52975981 | Msa1332960:CDS | 45.0% | |
| !! | GAGCGAGGAAAGCATGTTTT+AGG | - | chr8_4:52976069-52976088 | Msa1332960:five_prime_UTR | 45.0% |
| !!! | TAAATTTTAAAATATATTAC+AGG | - | chr8_4:52970510-52970529 | Msa1332960:intron | 5.0% |
| !! | ATTATATAAGAAATTAAAAA+TGG | + | chr8_4:52972827-52972846 | None:intergenic | 5.0% |
| !!! | GTTTATTTTTATTTATTTAT+TGG | - | chr8_4:52973492-52973511 | Msa1332960:intron | 5.0% |
| !! | TTTGTATATAAAATTAATAT+CGG | + | chr8_4:52974928-52974947 | None:intergenic | 5.0% |
| !!! | TTTTTATATTTTTCAAAAAT+TGG | - | chr8_4:52975517-52975536 | Msa1332960:intron | 5.0% |
| !!! | TTTTATATTTTTCAAAAATT+GGG | - | chr8_4:52975518-52975537 | Msa1332960:intron | 5.0% |
| CTTCAGAACCAGTGAAGTCC+CGG | - | chr8_4:52968092-52968111 | Msa1332960:three_prime_UTR | 50.0% | |
| !! | TCAATCAATCTGACTCGGCG+AGG | - | chr8_4:52968254-52968273 | Msa1332960:three_prime_UTR | 50.0% |
| GTGACCGGATTCTCTCTTGA+AGG | + | chr8_4:52968360-52968379 | None:intergenic | 50.0% | |
| GGAATCACGAACATCGTGGA+AGG | + | chr8_4:52968402-52968421 | None:intergenic | 50.0% | |
| ATGGAGCATGCGGCGAATAT+CGG | + | chr8_4:52968432-52968451 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGATG+AGG | + | chr8_4:52968473-52968492 | None:intergenic | 50.0% | |
| !! | GGTTCCGTTTCAAGTTCCGT+TGG | - | chr8_4:52968565-52968584 | Msa1332960:CDS | 50.0% |
| ! | TGTTGTACGGGAGAGAGTGT+TGG | - | chr8_4:52969030-52969049 | Msa1332960:intron | 50.0% |
| GGAGAGTAGACCATATGGAG+AGG | - | chr8_4:52969237-52969256 | Msa1332960:intron | 50.0% | |
| TGCTATCAGTTCAGGCTGTC+CGG | + | chr8_4:52969922-52969941 | None:intergenic | 50.0% | |
| AAAGAGGCAATGGTTCCTGC+AGG | - | chr8_4:52969957-52969976 | Msa1332960:intron | 50.0% | |
| TGGTTCCTGCAGGAAAAGCA+AGG | - | chr8_4:52969967-52969986 | Msa1332960:intron | 50.0% | |
| GGTTCCTGCAGGAAAAGCAA+GGG | - | chr8_4:52969968-52969987 | Msa1332960:intron | 50.0% | |
| !! | CGTTATCGCTATGATGGTGG+AGG | - | chr8_4:52970643-52970662 | Msa1332960:intron | 50.0% |
| GTGGAGGAGCAACTCAAGTT+TGG | - | chr8_4:52970659-52970678 | Msa1332960:intron | 50.0% | |
| ACTCAAGTTTGGCTGAGCTC+GGG | - | chr8_4:52970670-52970689 | Msa1332960:intron | 50.0% | |
| GTGGTCATTGACCTTTCAGC+AGG | - | chr8_4:52970870-52970889 | Msa1332960:intron | 50.0% | |
| AGGGCCCTGTACTTATGGTA+AGG | - | chr8_4:52970890-52970909 | Msa1332960:intron | 50.0% | |
| TGGGTTTGCCAGTTGCTACA+AGG | - | chr8_4:52971125-52971144 | Msa1332960:CDS | 50.0% | |
| TGCCAGTTGCTACAAGGTCA+AGG | - | chr8_4:52971131-52971150 | Msa1332960:CDS | 50.0% | |
| GCCAGTTGCTACAAGGTCAA+GGG | - | chr8_4:52971132-52971151 | Msa1332960:CDS | 50.0% | |
| ACCCTTGACCTTGTAGCAAC+TGG | + | chr8_4:52971136-52971155 | None:intergenic | 50.0% | |
| TGGGCCTCCAATAAACAGAG+AGG | - | chr8_4:52971250-52971269 | Msa1332960:intron | 50.0% | |
| GAGGGAAAAGGAATGAGGGT+AGG | - | chr8_4:52971305-52971324 | Msa1332960:intron | 50.0% | |
| GATAGAGGAGAAAGGGATGC+TGG | - | chr8_4:52971406-52971425 | Msa1332960:intron | 50.0% | |
| GGGATGCTGGAATCATTGAG+GGG | - | chr8_4:52971419-52971438 | Msa1332960:intron | 50.0% | |
| GGATGCTGGAATCATTGAGG+GGG | - | chr8_4:52971420-52971439 | Msa1332960:intron | 50.0% | |
| GAGGGGGACATGAGTATTAG+AGG | - | chr8_4:52971436-52971455 | Msa1332960:intron | 50.0% | |
| GAAAGGAGGGTTGTGGTAGA+AGG | - | chr8_4:52971458-52971477 | Msa1332960:intron | 50.0% | |
| !! | AAGGGTAATGGAAGACCGAC+AGG | + | chr8_4:52971642-52971661 | None:intergenic | 50.0% |
| CTTCTCATGTGACCGAACCT+TGG | - | chr8_4:52971719-52971738 | Msa1332960:intron | 50.0% | |
| CCGCAATTGACAGCTTCTCA+TGG | + | chr8_4:52972675-52972694 | None:intergenic | 50.0% | |
| GCGGTTTCAAAAGCTATGCG+TGG | - | chr8_4:52972691-52972710 | Msa1332960:intron | 50.0% | |
| TATGCGTGGACATTCACTGC+AGG | - | chr8_4:52972705-52972724 | Msa1332960:intron | 50.0% | |
| AGCACCGTCCAGATAAGTCT+TGG | + | chr8_4:52972764-52972783 | None:intergenic | 50.0% | |
| CATCCATCCAATTCTGTCGG+AGG | + | chr8_4:52973227-52973246 | None:intergenic | 50.0% | |
| ! | AGATAGTGGTGTACGCACAC+AGG | + | chr8_4:52973387-52973406 | None:intergenic | 50.0% |
| TGGGCTATTCGGACACTTGA+CGG | - | chr8_4:52973624-52973643 | Msa1332960:intron | 50.0% | |
| ! | TGGAGGACGAAAGTATGGTG+TGG | - | chr8_4:52974037-52974056 | Msa1332960:intron | 50.0% |
| ATGCCTTCCCTTCTCTCAAC+AGG | - | chr8_4:52974359-52974378 | Msa1332960:CDS | 50.0% | |
| ATTGGCTGGTATTGCCTCAG+TGG | - | chr8_4:52974736-52974755 | Msa1332960:intron | 50.0% | |
| ACTTAAACCACCCACCACTG+AGG | + | chr8_4:52974753-52974772 | None:intergenic | 50.0% | |
| !! | GGCTTTTCGTTTGCTGACAG+AGG | - | chr8_4:52974965-52974984 | Msa1332960:intron | 50.0% |
| GTCTGCGCATAGAATTGACC+GGG | + | chr8_4:52975105-52975124 | None:intergenic | 50.0% | |
| GGTCTGCGCATAGAATTGAC+CGG | + | chr8_4:52975106-52975125 | None:intergenic | 50.0% | |
| CTCTGCTGCAAAACCTTGGA+CGG | + | chr8_4:52975127-52975146 | None:intergenic | 50.0% | |
| TGAGCCTGTGAAGGGAAAGA+AGG | - | chr8_4:52975167-52975186 | Msa1332960:intron | 50.0% | |
| CTTCTCCAACCACAGTTCAG+TGG | + | chr8_4:52975202-52975221 | None:intergenic | 50.0% | |
| TTCTGATCTCTCTGGGCGTT+TGG | - | chr8_4:52975323-52975342 | Msa1332960:intron | 50.0% | |
| CCCTCTCACTCGTCAAAACA+TGG | + | chr8_4:52975636-52975655 | None:intergenic | 50.0% | |
| !!! | CATGGTTTTGATCAGCGCAC+CGG | + | chr8_4:52975781-52975800 | None:intergenic | 50.0% |
| ATGCTCTGCCTGGTGTGATA+AGG | + | chr8_4:52975822-52975841 | None:intergenic | 50.0% | |
| TTGTAGGTTCTACCAGCAGG+GGG | - | chr8_4:52975963-52975982 | Msa1332960:CDS | 50.0% | |
| AAATACACAAAGCCCCCTGC+TGG | + | chr8_4:52975978-52975997 | None:intergenic | 50.0% | |
| ! | GCACTTTTACGCCCTTCCAA+AGG | - | chr8_4:52976047-52976066 | Msa1332960:exon | 50.0% |
| ! | CTTTCCTCGCTCCTTTGGAA+GGG | + | chr8_4:52976061-52976080 | None:intergenic | 50.0% |
| ACATGCTTTCCTCGCTCCTT+TGG | + | chr8_4:52976066-52976085 | None:intergenic | 50.0% | |
| GTTGGACTTAGTCACGTGTG+TGG | - | chr8_4:52976229-52976248 | Msa1332960:five_prime_UTR | 50.0% | |
| AGAACAACTAGTCCACCCGC+CGG | + | chr8_4:52968114-52968133 | None:intergenic | 55.0% | |
| ATCCCAGTGAGCTTCAGCGA+CGG | - | chr8_4:52968137-52968156 | Msa1332960:three_prime_UTR | 55.0% | |
| !! | GAAGGGTTGTCGTGCTGACT+CGG | + | chr8_4:52968342-52968361 | None:intergenic | 55.0% |
| GAGAATCCGGTCACCCTCAA+TGG | - | chr8_4:52968366-52968385 | Msa1332960:three_prime_UTR | 55.0% | |
| GGACGGAATCACGAACATCG+TGG | + | chr8_4:52968406-52968425 | None:intergenic | 55.0% | |
| GCATGCGGCGAATATCGGAT+CGG | + | chr8_4:52968427-52968446 | None:intergenic | 55.0% | |
| TCCTGCAGGAAAAGCAAGGG+AGG | - | chr8_4:52969971-52969990 | Msa1332960:intron | 55.0% | |
| !! | ACCTCCCTTGCTTTTCCTGC+AGG | + | chr8_4:52969975-52969994 | None:intergenic | 55.0% |
| TGAGCTCGGGCAGGTAAGAA+AGG | - | chr8_4:52970683-52970702 | Msa1332960:intron | 55.0% | |
| AAGTACAGGGCCCTGCTGAA+AGG | + | chr8_4:52970884-52970903 | None:intergenic | 55.0% | |
| TCAGCAGGGCCCTGTACTTA+TGG | - | chr8_4:52970885-52970904 | Msa1332960:intron | 55.0% | |
| GGAGGGTTGTGGTAGAAGGT+AGG | - | chr8_4:52971462-52971481 | Msa1332960:intron | 55.0% | |
| ! | TCTGCTGATGTGCTTGCTGC+TGG | - | chr8_4:52973159-52973178 | Msa1332960:intron | 55.0% |
| ! | TTGCAAAGCAGGGCGTCACT+TGG | - | chr8_4:52973845-52973864 | Msa1332960:intron | 55.0% |
| GCTGGTATTGCCTCAGTGGT+GGG | - | chr8_4:52974740-52974759 | Msa1332960:intron | 55.0% | |
| !! | GTGAATTGGCTTTGGGCAGC+CGG | - | chr8_4:52974815-52974834 | Msa1332960:intron | 55.0% |
| GCAGCCGGTTGTCATCCATT+TGG | - | chr8_4:52974830-52974849 | Msa1332960:intron | 55.0% | |
| TTCTATGCGCAGACCGTCCA+AGG | - | chr8_4:52975111-52975130 | Msa1332960:intron | 55.0% | |
| TCCCTTCACAGGCTCACCAA+GGG | + | chr8_4:52975163-52975182 | None:intergenic | 55.0% | |
| TTCCCTTCACAGGCTCACCA+AGG | + | chr8_4:52975164-52975183 | None:intergenic | 55.0% | |
| GCTTTCCTCGCTCCTTTGGA+AGG | + | chr8_4:52976062-52976081 | None:intergenic | 55.0% | |
| CAGAACCAGTGAAGTCCCGG+CGG | - | chr8_4:52968095-52968114 | Msa1332960:three_prime_UTR | 60.0% | |
| AGAACCAGTGAAGTCCCGGC+GGG | - | chr8_4:52968096-52968115 | Msa1332960:three_prime_UTR | 60.0% | |
| GAACAACTAGTCCACCCGCC+GGG | + | chr8_4:52968113-52968132 | None:intergenic | 60.0% | |
| TGCCGTCGCTGAAGCTCACT+GGG | + | chr8_4:52968142-52968161 | None:intergenic | 60.0% | |
| !! | GTGGTGCCATTGAGGGTGAC+CGG | + | chr8_4:52968375-52968394 | None:intergenic | 60.0% |
| !! | AGGCGCTGTGGTGCCATTGA+GGG | + | chr8_4:52968382-52968401 | None:intergenic | 60.0% |
| !! | AAGGCGCTGTGGTGCCATTG+AGG | + | chr8_4:52968383-52968402 | None:intergenic | 60.0% |
| !! | GAACATCGTGGAAGGCGCTG+TGG | + | chr8_4:52968394-52968413 | None:intergenic | 60.0% |
| GCGGCGAATATCGGATCGGA+CGG | + | chr8_4:52968423-52968442 | None:intergenic | 60.0% | |
| GTACTACCTCGGCGCGAGAA+TGG | + | chr8_4:52968451-52968470 | None:intergenic | 60.0% | |
| AGTTCAGGCTGTCCGGCCTA+TGG | + | chr8_4:52969915-52969934 | None:intergenic | 60.0% | |
| AAGTTTGGCTGAGCTCGGGC+AGG | - | chr8_4:52970674-52970693 | Msa1332960:intron | 60.0% | |
| CATTTGGGTGGCTGTGCGAC+AGG | - | chr8_4:52971489-52971508 | Msa1332960:intron | 60.0% | |
| GGCTGGTATTGCCTCAGTGG+TGG | - | chr8_4:52974739-52974758 | Msa1332960:intron | 60.0% | |
| ! | GGTATTGCCTCAGTGGTGGG+TGG | - | chr8_4:52974743-52974762 | Msa1332960:intron | 60.0% |
| TCCCCTTGGTGAGCCTGTGA+AGG | - | chr8_4:52975158-52975177 | Msa1332960:intron | 60.0% | |
| CCCTTCACAGGCTCACCAAG+GGG | + | chr8_4:52975162-52975181 | None:intergenic | 60.0% | |
| CCCCTTGGTGAGCCTGTGAA+GGG | - | chr8_4:52975159-52975178 | Msa1332960:intron | 60.0% | |
| CAAGATGCTCCTCAAGGCCC+TGG | + | chr8_4:52975381-52975400 | None:intergenic | 60.0% | |
| TGGCAGTGGTATGCTCTGCC+TGG | + | chr8_4:52975832-52975851 | None:intergenic | 60.0% | |
| TACGCCCTTCCAAAGGAGCG+AGG | - | chr8_4:52976054-52976073 | Msa1332960:exon | 60.0% | |
| CTGCCGTCGCTGAAGCTCAC+TGG | + | chr8_4:52968143-52968162 | None:intergenic | 65.0% | |
| !! | TCTGACTCGGCGAGGCAGCA+TGG | - | chr8_4:52968262-52968281 | Msa1332960:three_prime_UTR | 65.0% |
| CGGCGCGAGAATGGAGCATG+CGG | + | chr8_4:52968442-52968461 | None:intergenic | 65.0% | |
| CATGCTCCATTCTCGCGCCG+AGG | - | chr8_4:52968442-52968461 | Msa1332960:three_prime_UTR | 65.0% | |
| ACCAGTGAAGTCCCGGCGGG+TGG | - | chr8_4:52968099-52968118 | Msa1332960:three_prime_UTR | 70.0% | |
| TCCACCCGCCGGGACTTCAC+TGG | + | chr8_4:52968103-52968122 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 52968081 | 52976254 | 52968081 | ID=Msa1332960;Name=Msa1332960 |
| chr8_4 | mRNA | 52968081 | 52976254 | 52968081 | ID=Msa1332960-mRNA-1;Parent=Msa1332960;Name=Msa1332960-mRNA-1;_AED=0.04;_eAED=0.04;_QI=200|1|1|1|1|1|15|465|803 |
| chr8_4 | exon | 52968081 | 52968711 | 52968081 | ID=Msa1332960-mRNA-1:exon:16083;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52968844 | 52968953 | 52968844 | ID=Msa1332960-mRNA-1:exon:16082;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52969039 | 52969212 | 52969039 | ID=Msa1332960-mRNA-1:exon:16081;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52969291 | 52969350 | 52969291 | ID=Msa1332960-mRNA-1:exon:16080;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52969431 | 52969656 | 52969431 | ID=Msa1332960-mRNA-1:exon:16079;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52970220 | 52970339 | 52970220 | ID=Msa1332960-mRNA-1:exon:16078;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52970947 | 52971188 | 52970947 | ID=Msa1332960-mRNA-1:exon:16077;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52971540 | 52971728 | 52971540 | ID=Msa1332960-mRNA-1:exon:16076;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52971865 | 52971991 | 52971865 | ID=Msa1332960-mRNA-1:exon:16075;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52973257 | 52973469 | 52973257 | ID=Msa1332960-mRNA-1:exon:16074;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52973640 | 52973803 | 52973640 | ID=Msa1332960-mRNA-1:exon:16073;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52974063 | 52974230 | 52974063 | ID=Msa1332960-mRNA-1:exon:16072;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52974343 | 52974417 | 52974343 | ID=Msa1332960-mRNA-1:exon:16071;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52975575 | 52975769 | 52975575 | ID=Msa1332960-mRNA-1:exon:16070;Parent=Msa1332960-mRNA-1 |
| chr8_4 | exon | 52975872 | 52976254 | 52975872 | ID=Msa1332960-mRNA-1:exon:16069;Parent=Msa1332960-mRNA-1 |
| chr8_4 | five_prime_UTR | 52976055 | 52976254 | 52976055 | ID=Msa1332960-mRNA-1:five_prime_utr;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52975872 | 52976054 | 52975872 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52975575 | 52975769 | 52975575 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52974343 | 52974417 | 52974343 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52974063 | 52974230 | 52974063 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52973640 | 52973803 | 52973640 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52973257 | 52973469 | 52973257 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52971865 | 52971991 | 52971865 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52971540 | 52971728 | 52971540 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52970947 | 52971188 | 52970947 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52970220 | 52970339 | 52970220 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52969431 | 52969656 | 52969431 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52969291 | 52969350 | 52969291 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52969039 | 52969212 | 52969039 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52968844 | 52968953 | 52968844 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | CDS | 52968546 | 52968711 | 52968546 | ID=Msa1332960-mRNA-1:cds;Parent=Msa1332960-mRNA-1 |
| chr8_4 | three_prime_UTR | 52968081 | 52968545 | 52968081 | ID=Msa1332960-mRNA-1:three_prime_utr;Parent=Msa1332960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
