Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0296600 | XP_003596607.1 | 99.080 | 761 | 7 | 0 | 1 | 761 | 1 | 761 | 0.0 | 1553 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0296600 | sp|P46875|KN14N_ARATH | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0195440 | Msa0296600 | 0.809379 | 1.948108e-50 | -8.615850e-47 |
Msa0217460 | Msa0296600 | 0.889600 | 2.095343e-73 | -8.615850e-47 |
Msa0237240 | Msa0296600 | 0.802523 | 5.389022e-49 | -8.615850e-47 |
Msa0257300 | Msa0296600 | 0.938470 | 6.376669e-99 | -8.615850e-47 |
Msa0296600 | Msa0331110 | 0.803493 | 3.395912e-49 | -8.615850e-47 |
Msa0296600 | Msa0334990 | 0.954228 | 4.745478e-112 | -8.615850e-47 |
Msa0296600 | Msa0580940 | 0.839738 | 1.324141e-57 | -8.615850e-47 |
Msa0296600 | Msa0967070 | 0.812153 | 4.892821e-51 | -8.615850e-47 |
Msa0296600 | Msa1040150 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
Msa0296600 | Msa1166190 | 0.813598 | 2.360929e-51 | -8.615850e-47 |
Msa0296600 | Msa1166290 | 0.821924 | 3.116300e-53 | -8.615850e-47 |
Msa0296600 | Msa1216090 | 0.811076 | 8.387897e-51 | -8.615850e-47 |
Msa0296600 | Msa1216340 | 0.822181 | 2.717525e-53 | -8.615850e-47 |
Msa0296600 | Msa1228630 | 0.808156 | 3.557334e-50 | -8.615850e-47 |
Msa0296600 | Msa1332960 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
Msa0296600 | Msa1351900 | 0.825495 | 4.544817e-54 | -8.615850e-47 |
Msa0296600 | Msa1362160 | 0.803690 | 3.091176e-49 | -8.615850e-47 |
Msa0296600 | Msa1408160 | 0.847882 | 8.731089e-60 | -8.615850e-47 |
Msa0296600 | Msa1410160 | 0.825297 | 5.060625e-54 | -8.615850e-47 |
Msa0296600 | Msa1448960 | 0.839160 | 1.871079e-57 | -8.615850e-47 |
Msa0296600 | Msa1452140 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0296600 | MtrunA17_Chr2g0319271 | 99.080 | 761 | 7 | 0 | 1 | 761 | 1 | 761 | 0.0 | 1553 |
Msa0296600 | MtrunA17_Chr4g0042061 | 80.971 | 762 | 142 | 3 | 1 | 761 | 34 | 793 | 0.0 | 1278 |
Msa0296600 | MtrunA17_Chr2g0280421 | 58.246 | 764 | 296 | 7 | 6 | 760 | 37 | 786 | 0.0 | 859 |
Msa0296600 | MtrunA17_Chr4g0049011 | 60.980 | 551 | 189 | 6 | 214 | 750 | 94 | 632 | 0.0 | 648 |
Msa0296600 | MtrunA17_Chr1g0191851 | 44.527 | 402 | 197 | 7 | 352 | 747 | 97 | 478 | 1.36e-95 | 314 |
Msa0296600 | MtrunA17_Chr2g0312631 | 44.652 | 374 | 191 | 5 | 374 | 747 | 359 | 716 | 7.34e-92 | 310 |
Msa0296600 | MtrunA17_Chr7g0272871 | 46.174 | 379 | 178 | 9 | 376 | 747 | 99 | 458 | 1.88e-90 | 299 |
Msa0296600 | MtrunA17_Chr1g0195111 | 44.032 | 377 | 173 | 9 | 387 | 751 | 384 | 734 | 1.15e-88 | 300 |
Msa0296600 | MtrunA17_Chr5g0411971 | 39.362 | 470 | 260 | 8 | 283 | 747 | 279 | 728 | 7.54e-88 | 299 |
Msa0296600 | MtrunA17_Chr5g0421521 | 37.773 | 503 | 280 | 11 | 248 | 747 | 231 | 703 | 8.49e-87 | 295 |
Msa0296600 | MtrunA17_Chr5g0421591 | 43.081 | 383 | 199 | 5 | 365 | 747 | 340 | 703 | 9.52e-87 | 293 |
Msa0296600 | MtrunA17_Chr7g0271961 | 42.394 | 401 | 188 | 10 | 359 | 746 | 359 | 729 | 5.76e-86 | 293 |
Msa0296600 | MtrunA17_Chr1g0192481 | 43.869 | 367 | 179 | 9 | 387 | 746 | 46 | 392 | 4.99e-85 | 281 |
Msa0296600 | MtrunA17_Chr5g0407791 | 36.344 | 465 | 268 | 8 | 283 | 739 | 765 | 1209 | 1.02e-80 | 281 |
Msa0296600 | MtrunA17_Chr8g0369881 | 38.482 | 382 | 214 | 5 | 371 | 752 | 847 | 1207 | 4.74e-79 | 276 |
Msa0296600 | MtrunA17_Chr7g0257301 | 37.939 | 456 | 232 | 12 | 322 | 746 | 314 | 749 | 1.46e-78 | 273 |
Msa0296600 | MtrunA17_Chr5g0447041 | 40.250 | 400 | 187 | 10 | 387 | 746 | 422 | 809 | 1.03e-76 | 269 |
Msa0296600 | MtrunA17_Chr3g0102921 | 40.811 | 370 | 194 | 7 | 387 | 744 | 426 | 782 | 3.73e-76 | 267 |
Msa0296600 | MtrunA17_Chr1g0191181 | 38.320 | 381 | 217 | 6 | 362 | 741 | 51 | 414 | 1.42e-73 | 251 |
Msa0296600 | MtrunA17_Chr1g0182151 | 39.255 | 349 | 192 | 8 | 399 | 736 | 54 | 393 | 9.97e-61 | 221 |
Msa0296600 | MtrunA17_Chr1g0178411 | 38.719 | 359 | 186 | 11 | 399 | 737 | 13 | 357 | 6.40e-60 | 219 |
Msa0296600 | MtrunA17_Chr2g0327581 | 37.047 | 359 | 206 | 8 | 390 | 737 | 39 | 388 | 1.36e-59 | 218 |
Msa0296600 | MtrunA17_Chr4g0045381 | 39.889 | 361 | 173 | 12 | 396 | 736 | 190 | 526 | 1.38e-59 | 219 |
Msa0296600 | MtrunA17_Chr7g0266631 | 37.989 | 358 | 190 | 10 | 399 | 737 | 9 | 353 | 1.05e-58 | 215 |
Msa0296600 | MtrunA17_Chr2g0322291 | 38.504 | 361 | 174 | 10 | 399 | 737 | 88 | 422 | 6.10e-56 | 208 |
Msa0296600 | MtrunA17_Chr3g0122121 | 37.845 | 362 | 178 | 11 | 400 | 739 | 99 | 435 | 1.26e-55 | 207 |
Msa0296600 | MtrunA17_Chr4g0069141 | 37.534 | 365 | 190 | 9 | 390 | 737 | 144 | 487 | 4.02e-55 | 206 |
Msa0296600 | MtrunA17_Chr3g0134191 | 36.264 | 364 | 194 | 11 | 400 | 737 | 9 | 360 | 9.22e-54 | 201 |
Msa0296600 | MtrunA17_Chr4g0053211 | 35.676 | 370 | 194 | 11 | 399 | 737 | 12 | 368 | 1.90e-53 | 200 |
Msa0296600 | MtrunA17_Chr8g0367581 | 35.989 | 364 | 206 | 5 | 386 | 749 | 133 | 469 | 4.32e-53 | 199 |
Msa0296600 | MtrunA17_Chr1g0153061 | 36.538 | 364 | 193 | 12 | 400 | 737 | 9 | 360 | 6.87e-53 | 198 |
Msa0296600 | MtrunA17_Chr8g0377731 | 38.147 | 367 | 167 | 12 | 400 | 739 | 56 | 389 | 1.52e-52 | 197 |
Msa0296600 | MtrunA17_Chr5g0427481 | 35.159 | 347 | 206 | 8 | 400 | 737 | 18 | 354 | 2.23e-51 | 194 |
Msa0296600 | MtrunA17_Chr1g0193221 | 36.467 | 351 | 179 | 9 | 400 | 737 | 4 | 323 | 2.64e-51 | 194 |
Msa0296600 | MtrunA17_Chr3g0132921 | 34.286 | 350 | 204 | 9 | 399 | 736 | 9 | 344 | 1.13e-50 | 186 |
Msa0296600 | MtrunA17_Chr2g0307481 | 37.861 | 346 | 184 | 9 | 400 | 736 | 69 | 392 | 1.82e-49 | 184 |
Msa0296600 | MtrunA17_Chr8g0386891 | 52.727 | 165 | 78 | 0 | 588 | 752 | 4 | 168 | 2.91e-48 | 176 |
Msa0296600 | MtrunA17_Chr1g0152231 | 35.511 | 352 | 188 | 9 | 400 | 737 | 4 | 330 | 1.14e-46 | 178 |
Msa0296600 | MtrunA17_Chr7g0269681 | 48.837 | 172 | 88 | 0 | 580 | 751 | 33 | 204 | 6.14e-46 | 171 |
Msa0296600 | MtrunA17_Chr6g0484501 | 50.820 | 183 | 90 | 0 | 570 | 752 | 16 | 198 | 8.86e-46 | 164 |
Msa0296600 | MtrunA17_Chr4g0062291 | 35.694 | 353 | 187 | 11 | 400 | 737 | 124 | 451 | 4.38e-45 | 172 |
Msa0296600 | MtrunA17_Chr6g0483701 | 34.884 | 301 | 165 | 6 | 442 | 736 | 73 | 348 | 2.21e-43 | 169 |
Msa0296600 | MtrunA17_Chr3g0145071 | 35.511 | 352 | 195 | 10 | 399 | 746 | 99 | 422 | 3.69e-43 | 169 |
Msa0296600 | MtrunA17_Chr4g0035661 | 35.311 | 354 | 197 | 10 | 397 | 746 | 87 | 412 | 1.41e-42 | 167 |
Msa0296600 | MtrunA17_Chr4g0036001 | 33.690 | 374 | 192 | 11 | 380 | 734 | 4 | 340 | 9.77e-42 | 164 |
Msa0296600 | MtrunA17_Chr5g0405181 | 33.427 | 356 | 180 | 11 | 400 | 735 | 21 | 339 | 1.85e-40 | 160 |
Msa0296600 | MtrunA17_Chr8g0372171 | 33.427 | 356 | 180 | 11 | 400 | 735 | 20 | 338 | 2.35e-40 | 160 |
Msa0296600 | MtrunA17_Chr6g0485471 | 34.254 | 362 | 192 | 10 | 400 | 747 | 116 | 445 | 3.24e-40 | 157 |
Msa0296600 | MtrunA17_Chr5g0445211 | 34.824 | 313 | 168 | 6 | 446 | 737 | 109 | 406 | 3.49e-40 | 159 |
Msa0296600 | MtrunA17_Chr7g0258991 | 35.028 | 354 | 192 | 12 | 397 | 742 | 71 | 394 | 4.75e-40 | 159 |
Msa0296600 | MtrunA17_Chr3g0101021 | 33.241 | 361 | 189 | 10 | 399 | 737 | 75 | 405 | 5.81e-40 | 159 |
Msa0296600 | MtrunA17_Chr5g0398521 | 30.000 | 370 | 213 | 9 | 396 | 741 | 54 | 401 | 6.55e-40 | 158 |
Msa0296600 | MtrunA17_Chr8g0390991 | 52.830 | 159 | 75 | 0 | 588 | 746 | 4 | 162 | 9.73e-40 | 155 |
Msa0296600 | MtrunA17_Chr4g0070001 | 32.199 | 382 | 210 | 11 | 366 | 742 | 124 | 461 | 2.67e-39 | 156 |
Msa0296600 | MtrunA17_Chr2g0331761 | 33.799 | 358 | 191 | 10 | 400 | 743 | 186 | 511 | 6.99e-39 | 154 |
Msa0296600 | MtrunA17_Chr2g0295881 | 33.416 | 401 | 205 | 16 | 374 | 747 | 176 | 541 | 4.40e-38 | 152 |
Msa0296600 | MtrunA17_Chr7g0245931 | 30.728 | 371 | 208 | 11 | 396 | 741 | 49 | 395 | 7.90e-38 | 152 |
Msa0296600 | MtrunA17_Chr3g0142261 | 33.523 | 352 | 184 | 10 | 400 | 735 | 20 | 337 | 1.04e-37 | 152 |
Msa0296600 | MtrunA17_Chr4g0067421 | 31.316 | 380 | 205 | 11 | 400 | 754 | 206 | 554 | 7.17e-37 | 148 |
Msa0296600 | MtrunA17_Chr7g0238581 | 30.894 | 369 | 212 | 10 | 400 | 758 | 26 | 361 | 3.47e-35 | 142 |
Msa0296600 | MtrunA17_Chr6g0484511 | 42.077 | 183 | 88 | 5 | 373 | 548 | 265 | 436 | 1.20e-34 | 138 |
Msa0296600 | MtrunA17_Chr8g0390981 | 34.354 | 294 | 156 | 10 | 266 | 548 | 395 | 662 | 6.08e-34 | 139 |
Msa0296600 | MtrunA17_Chr7g0269691 | 43.605 | 172 | 74 | 6 | 387 | 548 | 388 | 546 | 2.34e-33 | 135 |
Msa0296600 | MtrunA17_Chr8g0386901 | 31.751 | 337 | 189 | 10 | 224 | 548 | 324 | 631 | 7.30e-31 | 129 |
Msa0296600 | MtrunA17_Chr1g0187411 | 28.228 | 333 | 207 | 10 | 430 | 745 | 155 | 472 | 3.52e-26 | 115 |
Msa0296600 | MtrunA17_Chr6g0470541 | 26.087 | 276 | 177 | 5 | 446 | 719 | 51 | 301 | 2.32e-17 | 87.0 |
Msa0296600 | MtrunA17_Chr3g0142841 | 27.575 | 301 | 154 | 11 | 448 | 726 | 145 | 403 | 4.31e-17 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0296600 | AT5G54670.1 | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Msa0296600 | AT5G54670.2 | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Msa0296600 | AT4G27180.1 | 63.979 | 769 | 241 | 6 | 1 | 759 | 1 | 743 | 0.0 | 983 |
Msa0296600 | AT4G27180.2 | 63.979 | 769 | 241 | 6 | 1 | 759 | 1 | 743 | 0.0 | 983 |
Msa0296600 | AT5G54670.3 | 66.572 | 703 | 213 | 4 | 64 | 759 | 5 | 692 | 0.0 | 949 |
Msa0296600 | AT4G21270.1 | 63.194 | 739 | 259 | 3 | 34 | 760 | 55 | 792 | 0.0 | 924 |
Msa0296600 | AT4G05190.2 | 61.765 | 748 | 273 | 3 | 25 | 760 | 30 | 776 | 0.0 | 912 |
Msa0296600 | AT4G05190.1 | 62.129 | 742 | 268 | 3 | 31 | 760 | 49 | 789 | 0.0 | 911 |
Msa0296600 | AT1G72250.1 | 41.264 | 538 | 269 | 16 | 233 | 747 | 311 | 824 | 1.17e-98 | 331 |
Msa0296600 | AT1G72250.2 | 44.804 | 433 | 205 | 10 | 328 | 747 | 422 | 833 | 2.39e-98 | 330 |
Msa0296600 | AT1G72250.3 | 44.804 | 433 | 205 | 10 | 328 | 747 | 434 | 845 | 3.08e-98 | 330 |
Msa0296600 | AT1G72250.4 | 44.804 | 433 | 205 | 10 | 328 | 747 | 433 | 844 | 3.27e-98 | 330 |
Msa0296600 | AT2G22610.1 | 45.244 | 389 | 188 | 7 | 360 | 747 | 382 | 746 | 2.41e-94 | 317 |
Msa0296600 | AT5G27550.2 | 43.675 | 419 | 213 | 6 | 330 | 747 | 67 | 463 | 2.62e-94 | 311 |
Msa0296600 | AT5G27550.1 | 43.675 | 419 | 213 | 6 | 330 | 747 | 67 | 463 | 2.62e-94 | 311 |
Msa0296600 | AT2G22610.2 | 45.244 | 389 | 188 | 7 | 360 | 747 | 382 | 746 | 2.80e-94 | 317 |
Msa0296600 | AT2G22610.3 | 45.244 | 389 | 188 | 7 | 360 | 747 | 383 | 747 | 3.59e-94 | 317 |
Msa0296600 | AT1G73860.2 | 44.974 | 378 | 172 | 7 | 387 | 752 | 414 | 767 | 7.15e-90 | 303 |
Msa0296600 | AT1G63640.5 | 39.695 | 524 | 257 | 15 | 258 | 752 | 309 | 802 | 2.80e-89 | 303 |
Msa0296600 | AT1G63640.1 | 39.695 | 524 | 257 | 15 | 258 | 752 | 319 | 812 | 3.29e-89 | 303 |
Msa0296600 | AT1G63640.4 | 39.695 | 524 | 257 | 15 | 258 | 752 | 319 | 812 | 3.29e-89 | 303 |
Msa0296600 | AT1G63640.3 | 39.695 | 524 | 257 | 15 | 258 | 752 | 319 | 812 | 3.50e-89 | 303 |
Msa0296600 | AT1G18410.5 | 36.984 | 630 | 313 | 20 | 150 | 752 | 239 | 811 | 7.35e-89 | 301 |
Msa0296600 | AT1G73860.1 | 45.600 | 375 | 174 | 7 | 387 | 752 | 497 | 850 | 8.17e-89 | 301 |
Msa0296600 | AT1G18410.3 | 36.926 | 631 | 320 | 21 | 150 | 752 | 249 | 829 | 1.11e-88 | 301 |
Msa0296600 | AT1G18410.2 | 36.926 | 631 | 320 | 21 | 150 | 752 | 249 | 829 | 1.11e-88 | 301 |
Msa0296600 | AT5G41310.1 | 44.473 | 389 | 165 | 8 | 373 | 752 | 398 | 744 | 3.50e-88 | 298 |
Msa0296600 | AT2G47500.2 | 44.780 | 364 | 177 | 6 | 387 | 746 | 387 | 730 | 7.80e-88 | 297 |
Msa0296600 | AT2G47500.1 | 44.780 | 364 | 177 | 6 | 387 | 746 | 387 | 730 | 1.78e-87 | 297 |
Msa0296600 | AT1G18410.4 | 36.926 | 631 | 320 | 21 | 150 | 752 | 392 | 972 | 1.93e-87 | 299 |
Msa0296600 | AT1G18410.1 | 36.825 | 630 | 314 | 20 | 150 | 752 | 392 | 964 | 2.17e-87 | 299 |
Msa0296600 | AT1G09170.3 | 43.902 | 369 | 174 | 8 | 387 | 746 | 422 | 766 | 2.57e-87 | 293 |
Msa0296600 | AT1G09170.7 | 43.902 | 369 | 174 | 8 | 387 | 746 | 422 | 766 | 2.57e-87 | 293 |
Msa0296600 | AT1G09170.4 | 43.902 | 369 | 174 | 8 | 387 | 746 | 422 | 766 | 2.58e-87 | 294 |
Msa0296600 | AT1G63640.2 | 39.504 | 524 | 251 | 15 | 258 | 752 | 319 | 805 | 2.92e-87 | 298 |
Msa0296600 | AT1G09170.2 | 43.989 | 366 | 178 | 8 | 387 | 746 | 422 | 766 | 4.96e-87 | 294 |
Msa0296600 | AT1G09170.5 | 43.902 | 369 | 174 | 8 | 387 | 746 | 422 | 766 | 3.84e-86 | 294 |
Msa0296600 | AT5G27000.1 | 41.204 | 432 | 211 | 11 | 326 | 746 | 328 | 727 | 4.31e-86 | 293 |
Msa0296600 | AT3G10310.2 | 41.844 | 423 | 212 | 13 | 337 | 746 | 294 | 695 | 2.75e-82 | 282 |
Msa0296600 | AT3G10310.1 | 41.844 | 423 | 212 | 13 | 337 | 746 | 294 | 695 | 3.72e-82 | 282 |
Msa0296600 | AT3G44730.1 | 38.215 | 437 | 214 | 11 | 335 | 746 | 306 | 711 | 3.11e-79 | 276 |
Msa0296600 | AT3G44730.4 | 38.215 | 437 | 214 | 11 | 335 | 746 | 306 | 711 | 3.11e-79 | 276 |
Msa0296600 | AT3G44730.2 | 38.215 | 437 | 214 | 11 | 335 | 746 | 351 | 756 | 3.72e-79 | 276 |
Msa0296600 | AT3G44730.3 | 38.215 | 437 | 214 | 11 | 335 | 746 | 351 | 756 | 3.72e-79 | 276 |
Msa0296600 | AT5G65930.1 | 40.054 | 367 | 200 | 5 | 371 | 737 | 859 | 1205 | 6.22e-78 | 273 |
Msa0296600 | AT5G65930.3 | 40.054 | 367 | 200 | 5 | 371 | 737 | 866 | 1212 | 6.77e-78 | 273 |
Msa0296600 | AT5G65930.2 | 40.054 | 367 | 200 | 5 | 371 | 737 | 860 | 1206 | 7.29e-78 | 273 |
Msa0296600 | AT1G55550.1 | 37.469 | 403 | 225 | 8 | 346 | 743 | 34 | 414 | 5.58e-75 | 260 |
Msa0296600 | AT1G09170.6 | 43.769 | 329 | 152 | 8 | 387 | 706 | 422 | 726 | 2.58e-73 | 253 |
Msa0296600 | AT1G09170.8 | 43.769 | 329 | 152 | 8 | 387 | 706 | 422 | 726 | 2.58e-73 | 253 |
Msa0296600 | AT5G27950.1 | 38.058 | 381 | 218 | 6 | 362 | 741 | 42 | 405 | 1.07e-72 | 249 |
Msa0296600 | AT1G09170.1 | 40.108 | 369 | 152 | 8 | 387 | 746 | 422 | 730 | 1.46e-71 | 253 |
Msa0296600 | AT2G36200.1 | 39.106 | 358 | 186 | 10 | 399 | 737 | 12 | 356 | 3.38e-61 | 223 |
Msa0296600 | AT2G36200.2 | 39.106 | 358 | 186 | 10 | 399 | 737 | 12 | 356 | 4.82e-61 | 223 |
Msa0296600 | AT3G19050.1 | 39.554 | 359 | 179 | 10 | 396 | 737 | 190 | 527 | 7.41e-60 | 221 |
Msa0296600 | AT2G37420.1 | 38.395 | 349 | 196 | 9 | 399 | 737 | 48 | 387 | 7.73e-60 | 219 |
Msa0296600 | AT2G37420.2 | 38.395 | 349 | 196 | 9 | 399 | 737 | 48 | 387 | 7.73e-60 | 219 |
Msa0296600 | AT3G45850.2 | 38.527 | 353 | 190 | 10 | 399 | 737 | 55 | 394 | 9.05e-60 | 219 |
Msa0296600 | AT3G45850.1 | 38.527 | 353 | 190 | 10 | 399 | 737 | 55 | 394 | 9.05e-60 | 219 |
Msa0296600 | AT2G28620.3 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 2.79e-57 | 212 |
Msa0296600 | AT2G28620.2 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 2.79e-57 | 212 |
Msa0296600 | AT2G28620.1 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 3.24e-57 | 212 |
Msa0296600 | AT3G17360.2 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.68e-56 | 211 |
Msa0296600 | AT3G17360.1 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.70e-56 | 211 |
Msa0296600 | AT3G17360.3 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.91e-56 | 210 |
Msa0296600 | AT5G65460.6 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.25e-54 | 204 |
Msa0296600 | AT5G65460.2 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.51e-54 | 204 |
Msa0296600 | AT5G65460.4 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.98e-54 | 204 |
Msa0296600 | AT5G65460.1 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.99e-54 | 204 |
Msa0296600 | AT4G14150.1 | 37.293 | 362 | 177 | 11 | 400 | 739 | 92 | 425 | 2.86e-54 | 203 |
Msa0296600 | AT5G47820.2 | 37.158 | 366 | 194 | 12 | 399 | 737 | 11 | 367 | 3.16e-54 | 202 |
Msa0296600 | AT5G47820.1 | 37.158 | 366 | 194 | 12 | 399 | 737 | 11 | 367 | 3.16e-54 | 202 |
Msa0296600 | AT3G44050.1 | 38.202 | 356 | 182 | 10 | 399 | 737 | 93 | 427 | 3.67e-54 | 203 |
Msa0296600 | AT5G65460.3 | 35.211 | 355 | 202 | 5 | 386 | 736 | 125 | 455 | 5.63e-54 | 202 |
Msa0296600 | AT3G23670.2 | 37.293 | 362 | 177 | 11 | 400 | 739 | 97 | 430 | 7.11e-54 | 201 |
Msa0296600 | AT3G23670.1 | 37.293 | 362 | 177 | 11 | 400 | 739 | 97 | 430 | 1.23e-53 | 201 |
Msa0296600 | AT5G10470.1 | 35.897 | 351 | 198 | 7 | 386 | 736 | 129 | 452 | 1.05e-52 | 199 |
Msa0296600 | AT5G10470.2 | 35.897 | 351 | 198 | 7 | 386 | 736 | 129 | 452 | 1.07e-52 | 199 |
Msa0296600 | AT3G50240.2 | 36.585 | 369 | 186 | 12 | 400 | 737 | 26 | 377 | 6.03e-52 | 195 |
Msa0296600 | AT3G50240.4 | 36.141 | 368 | 189 | 10 | 400 | 737 | 26 | 377 | 1.18e-51 | 195 |
Msa0296600 | AT3G50240.1 | 36.585 | 369 | 186 | 12 | 400 | 737 | 26 | 377 | 1.30e-51 | 195 |
Msa0296600 | AT3G10180.2 | 36.182 | 351 | 181 | 7 | 400 | 737 | 4 | 324 | 1.92e-50 | 192 |
Msa0296600 | AT3G10180.1 | 36.182 | 351 | 181 | 7 | 400 | 737 | 4 | 324 | 2.01e-50 | 192 |
Msa0296600 | AT1G59540.1 | 36.628 | 344 | 185 | 8 | 400 | 736 | 4 | 321 | 3.47e-48 | 183 |
Msa0296600 | AT3G63480.2 | 35.519 | 366 | 189 | 14 | 399 | 746 | 3 | 339 | 9.25e-48 | 176 |
Msa0296600 | AT5G60930.1 | 34.160 | 363 | 202 | 10 | 400 | 737 | 7 | 357 | 1.14e-47 | 183 |
Msa0296600 | AT5G60930.3 | 34.160 | 363 | 202 | 10 | 400 | 737 | 7 | 357 | 1.90e-47 | 182 |
Msa0296600 | AT5G60930.2 | 33.884 | 363 | 203 | 10 | 400 | 737 | 7 | 357 | 2.32e-47 | 182 |
Msa0296600 | AT3G63480.1 | 36.339 | 366 | 190 | 15 | 399 | 746 | 3 | 343 | 2.77e-47 | 175 |
Msa0296600 | AT1G18370.1 | 33.711 | 353 | 185 | 10 | 400 | 737 | 32 | 350 | 5.44e-44 | 171 |
Msa0296600 | AT2G21380.2 | 35.135 | 370 | 204 | 11 | 383 | 746 | 88 | 427 | 2.12e-43 | 170 |
Msa0296600 | AT2G21380.1 | 35.135 | 370 | 204 | 11 | 383 | 746 | 88 | 427 | 2.12e-43 | 170 |
Msa0296600 | AT4G39050.1 | 35.135 | 370 | 204 | 11 | 383 | 746 | 82 | 421 | 2.73e-43 | 169 |
Msa0296600 | AT5G06670.2 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.03e-43 | 169 |
Msa0296600 | AT5G06670.3 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.03e-43 | 169 |
Msa0296600 | AT5G06670.8 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.69e-43 | 167 |
Msa0296600 | AT5G06670.4 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.69e-43 | 167 |
Msa0296600 | AT5G06670.7 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.69e-43 | 167 |
Msa0296600 | AT1G18550.1 | 34.957 | 349 | 194 | 10 | 400 | 737 | 152 | 478 | 4.78e-43 | 167 |
Msa0296600 | AT5G06670.5 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.82e-43 | 167 |
Msa0296600 | AT1G21730.1 | 36.313 | 358 | 194 | 11 | 395 | 746 | 71 | 400 | 7.36e-43 | 167 |
Msa0296600 | AT3G54870.2 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.11e-42 | 167 |
Msa0296600 | AT3G54870.1 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.11e-42 | 167 |
Msa0296600 | AT3G54870.3 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.15e-42 | 167 |
Msa0296600 | AT5G66310.2 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 8.04e-42 | 165 |
Msa0296600 | AT5G66310.3 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 8.04e-42 | 165 |
Msa0296600 | AT5G66310.1 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 8.04e-42 | 165 |
Msa0296600 | AT5G06670.6 | 35.165 | 364 | 193 | 13 | 394 | 742 | 61 | 396 | 1.04e-41 | 164 |
Msa0296600 | AT5G06670.1 | 35.165 | 364 | 193 | 13 | 394 | 742 | 61 | 396 | 1.04e-41 | 164 |
Msa0296600 | AT3G51150.2 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.12e-41 | 164 |
Msa0296600 | AT3G51150.4 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.12e-41 | 164 |
Msa0296600 | AT3G51150.3 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.12e-41 | 164 |
Msa0296600 | AT3G51150.1 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.21e-41 | 164 |
Msa0296600 | AT3G49650.1 | 34.323 | 303 | 174 | 5 | 446 | 744 | 66 | 347 | 2.47e-41 | 162 |
Msa0296600 | AT3G50240.3 | 38.489 | 278 | 141 | 6 | 485 | 737 | 3 | 275 | 7.33e-41 | 162 |
Msa0296600 | AT3G12020.4 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 8.58e-41 | 161 |
Msa0296600 | AT3G12020.1 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 8.58e-41 | 161 |
Msa0296600 | AT3G12020.3 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 1.76e-40 | 160 |
Msa0296600 | AT3G12020.2 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 1.76e-40 | 160 |
Msa0296600 | AT3G20150.1 | 35.127 | 316 | 167 | 8 | 446 | 739 | 136 | 435 | 3.68e-39 | 157 |
Msa0296600 | AT3G20150.2 | 35.127 | 316 | 167 | 8 | 446 | 739 | 136 | 435 | 3.87e-39 | 156 |
Msa0296600 | AT5G27950.2 | 36.475 | 244 | 147 | 3 | 499 | 741 | 3 | 239 | 1.31e-38 | 150 |
Msa0296600 | AT1G01950.1 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.55e-38 | 154 |
Msa0296600 | AT1G01950.2 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.65e-38 | 154 |
Msa0296600 | AT1G01950.3 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.69e-38 | 154 |
Msa0296600 | AT1G12430.1 | 31.790 | 324 | 179 | 8 | 440 | 741 | 110 | 413 | 1.79e-38 | 154 |
Msa0296600 | AT1G12430.2 | 31.790 | 324 | 179 | 8 | 440 | 741 | 110 | 413 | 1.85e-38 | 154 |
Msa0296600 | AT3G16060.1 | 32.958 | 355 | 198 | 9 | 400 | 743 | 170 | 495 | 3.54e-38 | 152 |
Msa0296600 | AT4G38950.3 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.90e-37 | 150 |
Msa0296600 | AT4G38950.5 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.90e-37 | 150 |
Msa0296600 | AT4G38950.4 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.90e-37 | 150 |
Msa0296600 | AT4G38950.1 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.90e-37 | 150 |
Msa0296600 | AT4G38950.2 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.90e-37 | 150 |
Msa0296600 | AT3G43210.3 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 1.91e-37 | 151 |
Msa0296600 | AT3G43210.5 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 1.91e-37 | 151 |
Msa0296600 | AT3G43210.2 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 1.91e-37 | 151 |
Msa0296600 | AT3G43210.4 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 1.91e-37 | 151 |
Msa0296600 | AT3G43210.1 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 1.91e-37 | 151 |
Msa0296600 | AT4G24170.1 | 34.653 | 303 | 160 | 7 | 443 | 735 | 47 | 321 | 4.34e-37 | 150 |
Msa0296600 | AT4G24170.2 | 34.653 | 303 | 160 | 7 | 443 | 735 | 47 | 321 | 4.34e-37 | 150 |
Msa0296600 | AT5G02370.1 | 30.946 | 349 | 198 | 11 | 399 | 736 | 20 | 336 | 6.92e-36 | 144 |
Msa0296600 | AT2G21300.2 | 30.914 | 372 | 205 | 11 | 380 | 734 | 4 | 340 | 1.10e-35 | 145 |
Msa0296600 | AT2G21300.4 | 30.914 | 372 | 205 | 11 | 380 | 734 | 4 | 340 | 1.10e-35 | 145 |
Msa0296600 | AT2G21300.3 | 30.914 | 372 | 205 | 11 | 380 | 734 | 4 | 340 | 1.10e-35 | 145 |
Msa0296600 | AT2G21300.1 | 30.914 | 372 | 205 | 11 | 380 | 734 | 4 | 340 | 1.10e-35 | 145 |
Msa0296600 | AT2G21300.5 | 30.914 | 372 | 205 | 11 | 380 | 734 | 4 | 340 | 1.10e-35 | 145 |
Msa0296600 | AT3G16630.2 | 30.556 | 360 | 202 | 7 | 400 | 739 | 194 | 525 | 5.84e-35 | 143 |
Msa0296600 | AT3G16630.1 | 30.556 | 360 | 202 | 7 | 400 | 739 | 194 | 525 | 5.84e-35 | 143 |
Msa0296600 | AT1G59540.2 | 37.705 | 244 | 129 | 4 | 499 | 736 | 3 | 229 | 6.03e-35 | 142 |
Msa0296600 | AT1G01950.4 | 32.155 | 283 | 149 | 7 | 481 | 741 | 1 | 262 | 4.04e-30 | 127 |
Msa0296600 | AT4G14330.1 | 30.833 | 360 | 212 | 14 | 408 | 751 | 42 | 380 | 9.15e-30 | 127 |
Msa0296600 | AT5G42490.2 | 34.836 | 244 | 128 | 6 | 445 | 683 | 55 | 272 | 3.09e-25 | 112 |
Msa0296600 | AT5G42490.1 | 34.836 | 244 | 128 | 6 | 445 | 683 | 55 | 272 | 3.32e-25 | 112 |
Msa0296600 | AT5G65460.5 | 32.381 | 210 | 122 | 3 | 527 | 736 | 13 | 202 | 3.00e-22 | 103 |
Msa0296600 | AT3G51150.5 | 40.476 | 168 | 86 | 3 | 578 | 735 | 20 | 183 | 4.41e-22 | 102 |
Msa0296600 | AT5G23910.2 | 26.875 | 320 | 196 | 13 | 441 | 759 | 54 | 336 | 9.65e-17 | 85.1 |
Msa0296600 | AT5G23910.1 | 26.875 | 320 | 196 | 13 | 441 | 759 | 50 | 332 | 1.05e-16 | 85.1 |
Msa0296600 | AT1G20060.2 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.05e-13 | 75.5 |
Msa0296600 | AT1G20060.6 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.08e-13 | 75.5 |
Msa0296600 | AT1G20060.5 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.21e-13 | 75.5 |
Msa0296600 | AT1G20060.7 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.34e-13 | 75.5 |
Msa0296600 | AT1G20060.10 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.34e-13 | 75.1 |
Msa0296600 | AT1G20060.4 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.36e-13 | 75.1 |
Msa0296600 | AT1G20060.8 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.36e-13 | 75.1 |
Msa0296600 | AT1G20060.9 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.41e-13 | 75.1 |
Msa0296600 | AT1G20060.3 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.41e-13 | 75.1 |
Find 168 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAATTACATAATACAATTT+TGG | 0.174512 | 2_3:+50010585 | Msa0296600:CDS |
TGTAGAATTAAAGCTAATTT+TGG | 0.191152 | 2_3:-50013833 | None:intergenic |
ATTAAATCTGTCTTTCCTTT+TGG | 0.236411 | 2_3:-50008574 | None:intergenic |
GGAAAATCTTACAATGTTAA+AGG | 0.252322 | 2_3:+50009876 | Msa0296600:CDS |
AAGTTTGCACTTGAGAAATT+TGG | 0.253930 | 2_3:-50010106 | None:intergenic |
AGCAATGCTGGTTCTGATTA+TGG | 0.268541 | 2_3:+50008498 | Msa0296600:CDS |
GAAAGCCTTCTTCCATTCAT+TGG | 0.287525 | 2_3:-50008423 | None:intergenic |
ATATGATTGATTATATAAAA+AGG | 0.298027 | 2_3:+50009005 | Msa0296600:CDS |
GCGTATGGTCAGACAGGTTC+AGG | 0.306386 | 2_3:+50011397 | Msa0296600:CDS |
AATGGAAGAAGGCTTTCTTT+TGG | 0.319953 | 2_3:+50008429 | Msa0296600:CDS |
GTATTCACTCTTCGAATATA+CGG | 0.320557 | 2_3:+50012118 | Msa0296600:CDS |
GGCTCAAGGTTTGCATTAGA+TGG | 0.325416 | 2_3:+50009026 | Msa0296600:CDS |
GACGCAACCCGTGCAGAAAA+TGG | 0.331591 | 2_3:+50011721 | Msa0296600:CDS |
AGAGTAAATGCTTGTGAAAT+CGG | 0.335605 | 2_3:+50013668 | Msa0296600:CDS |
GAAGAGTACAGATTGGTATT+TGG | 0.342215 | 2_3:-50008005 | None:intergenic |
TGGAATATGATCCTCCTTCT+TGG | 0.342601 | 2_3:-50012705 | None:intergenic |
CTAAATCTCATTGATCTTGC+TGG | 0.351017 | 2_3:+50012456 | Msa0296600:CDS |
CACTGCACTGAAGTGTTGTT+GGG | 0.351355 | 2_3:+50008128 | Msa0296600:five_prime_UTR |
CTTTCAAGGAGTGGCTCAAC+TGG | 0.355830 | 2_3:+50012489 | Msa0296600:CDS |
AAGTGCTCTTGATGGTTATA+AGG | 0.358591 | 2_3:+50011013 | Msa0296600:CDS |
CCTACCTCCATGGAAGCTTC+TGG | 0.358952 | 2_3:+50010784 | Msa0296600:CDS |
TATATTCATGATTTCATTTG+AGG | 0.362858 | 2_3:-50013754 | None:intergenic |
GGGCCAACTTGCTCTGTCTA+TGG | 0.370913 | 2_3:+50009897 | Msa0296600:CDS |
AGAGAAGTTGAAGAGTTCAT+TGG | 0.385008 | 2_3:+50009084 | Msa0296600:CDS |
AATATATTGTTTAACCTGCT+TGG | 0.388793 | 2_3:+50013771 | Msa0296600:three_prime_UTR |
AGGAGGATCATATTCCATTC+AGG | 0.389504 | 2_3:+50012711 | Msa0296600:CDS |
GCGGAATACAAACTTATAGA+AGG | 0.398578 | 2_3:+50010547 | Msa0296600:CDS |
GCTCCTGACCAAGCTTCATC+TGG | 0.400049 | 2_3:+50013614 | Msa0296600:CDS |
TTAGAACACCTTGTACTTGT+TGG | 0.402581 | 2_3:-50012437 | None:intergenic |
AAACTCAACAATCAAATTGA+TGG | 0.403638 | 2_3:+50014087 | Msa0296600:three_prime_UTR |
TCTGCACGGGTTGCGTCTGA+TGG | 0.408314 | 2_3:-50011715 | None:intergenic |
AAAGATTCTTCAGAAAAGTC+TGG | 0.416172 | 2_3:+50010152 | Msa0296600:CDS |
CTGGGAGTGAGCGTCTTTCA+AGG | 0.422087 | 2_3:+50012475 | Msa0296600:CDS |
AGTAGCTCAACTCAAGATCT+TGG | 0.422261 | 2_3:-50009051 | None:intergenic |
GAACAATTTGAAGGTGTTGT+AGG | 0.422845 | 2_3:-50008199 | None:intergenic |
GCCTGGACATCCCGGAGAAA+AGG | 0.427463 | 2_3:+50011444 | Msa0296600:CDS |
TTTGCAAGATAGTCATATAA+AGG | 0.427962 | 2_3:+50010315 | Msa0296600:CDS |
CTGCACGGGTTGCGTCTGAT+GGG | 0.431307 | 2_3:-50011714 | None:intergenic |
ACTTCTTCTTGTAATGCATC+AGG | 0.431553 | 2_3:-50010963 | None:intergenic |
TGAAACGATTCGTGATTTGT+TGG | 0.432566 | 2_3:+50011675 | Msa0296600:CDS |
TTCTGTAGGGCGACCGTTGG+TGG | 0.434138 | 2_3:-50013705 | None:intergenic |
CTTGTGCAAAGTGCTCTTGA+TGG | 0.436000 | 2_3:+50011005 | Msa0296600:CDS |
CTTGGAGGAGTCAATTTGCC+TGG | 0.437884 | 2_3:+50013789 | Msa0296600:three_prime_UTR |
GAAAATCTTACAATGTTAAA+GGG | 0.439570 | 2_3:+50009877 | Msa0296600:CDS |
AGGCCTGCCCATCATTGTAT+AGG | 0.442108 | 2_3:-50011425 | None:intergenic |
GTTTACTGATAATATAATGT+AGG | 0.442813 | 2_3:-50013993 | None:intergenic |
AGTCTCAGCAACCGCAAGGC+TGG | 0.443386 | 2_3:+50011509 | Msa0296600:CDS |
GAGTAAATGCTTGTGAAATC+GGG | 0.443537 | 2_3:+50013669 | Msa0296600:CDS |
CGTGCAGAAAATGGTACTCC+TGG | 0.448766 | 2_3:+50011730 | Msa0296600:CDS |
ACACTTGAGTTTCTTTCAAT+CGG | 0.448769 | 2_3:-50012515 | None:intergenic |
TTAACTAAATGCATAGTACT+TGG | 0.449526 | 2_3:-50013897 | None:intergenic |
GGAAATGGTGGACATGATCT+TGG | 0.453463 | 2_3:+50008456 | Msa0296600:CDS |
TTGCTTGGTGGAGTACTACT+TGG | 0.454455 | 2_3:-50008480 | None:intergenic |
ACACTGCACTGAAGTGTTGT+TGG | 0.457229 | 2_3:+50008127 | Msa0296600:five_prime_UTR |
TGTACCTTTGAACAATTTGA+AGG | 0.461024 | 2_3:-50008208 | None:intergenic |
TCTGAGCTGCAACTTTCATC+AGG | 0.468102 | 2_3:-50010742 | None:intergenic |
TATACAATGATGGGCAGGCC+TGG | 0.471135 | 2_3:+50011427 | Msa0296600:CDS |
TTGATTGAGTATTGCTTCCC+AGG | 0.476119 | 2_3:-50011748 | None:intergenic |
CCTGGACATCCCGGAGAAAA+GGG | 0.477026 | 2_3:+50011445 | Msa0296600:CDS |
ATAATATAATGTAGGGTAAG+TGG | 0.480283 | 2_3:-50013985 | None:intergenic |
GAGAGAGAAACTAGTATTGT+GGG | 0.481781 | 2_3:-50008081 | None:intergenic |
GAGAGTCACTATGCTCGCTT+CGG | 0.484070 | 2_3:+50013636 | Msa0296600:CDS |
CTTGGTGCAACTCGCTTCGA+AGG | 0.484156 | 2_3:-50010064 | None:intergenic |
GTAAGCTTTGAGTTCCTGAA+TGG | 0.484898 | 2_3:-50012725 | None:intergenic |
TAAATCTCATTGATCTTGCT+GGG | 0.487547 | 2_3:+50012457 | Msa0296600:CDS |
TCTCCAGATGAAGCTTGGTC+AGG | 0.488432 | 2_3:-50013617 | None:intergenic |
GGCATTGAATTGACACAAAA+CGG | 0.488804 | 2_3:+50010811 | Msa0296600:CDS |
AAATTTACAGGTGTCAATGT+TGG | 0.492826 | 2_3:+50011642 | Msa0296600:intron |
TAAATCAAGCAGCAAGCAGC+AGG | 0.499431 | 2_3:+50011851 | Msa0296600:CDS |
GACCATTAAAACAAATGAGT+TGG | 0.499926 | 2_3:+50010193 | Msa0296600:CDS |
AGATGTTGAGAGTGTAAAAG+AGG | 0.503736 | 2_3:+50011816 | Msa0296600:CDS |
TTTACTGATAATATAATGTA+GGG | 0.505011 | 2_3:-50013992 | None:intergenic |
GAGAAAGATGAGAATGTGAA+AGG | 0.507829 | 2_3:-50007945 | None:intergenic |
TTCTGTTCTTGTCTCAATTG+CGG | 0.508219 | 2_3:-50010473 | None:intergenic |
ATGGGCAGGCCTGGACATCC+CGG | 0.508285 | 2_3:+50011436 | Msa0296600:CDS |
TTTATTTCTATTTAGATCTG+TGG | 0.508771 | 2_3:+50012054 | Msa0296600:intron |
ATGGTGGGAACTCCAATGAA+TGG | 0.508792 | 2_3:+50008411 | Msa0296600:CDS |
GCCTCGTCCAGAAGCTTCCA+TGG | 0.508808 | 2_3:-50010791 | None:intergenic |
TTATTTCTATTTAGATCTGT+GGG | 0.508816 | 2_3:+50012055 | Msa0296600:intron |
AGGCTAGGCTTGACTTTGAA+AGG | 0.512142 | 2_3:+50009457 | Msa0296600:CDS |
AGGGAAAACCTATACAATGA+TGG | 0.512159 | 2_3:+50011417 | Msa0296600:CDS |
ATATTGTTTAACCTGCTTGG+AGG | 0.513634 | 2_3:+50013774 | Msa0296600:three_prime_UTR |
AACACCTTCAAATTGTTCAA+AGG | 0.521777 | 2_3:+50008204 | Msa0296600:five_prime_UTR |
AAAGCTTACATACCTACTTC+AGG | 0.523943 | 2_3:+50012739 | Msa0296600:CDS |
AAACTAGTATTGTGGGGCCA+TGG | 0.523961 | 2_3:-50008074 | None:intergenic |
GGTCTCGATCATCCCTCACT+TGG | 0.525486 | 2_3:-50010082 | None:intergenic |
GAGTACAGATTGGTATTTGG+TGG | 0.525755 | 2_3:-50008002 | None:intergenic |
TTTGCACTTGAGAAATTTGG+CGG | 0.526878 | 2_3:-50010103 | None:intergenic |
AGTACTCCACCAAGCAATGC+TGG | 0.529000 | 2_3:+50008486 | Msa0296600:CDS |
GATGAAAGTTGCAGCTCAGA+AGG | 0.529522 | 2_3:+50010745 | Msa0296600:CDS |
TCCATGGAAGCTTCTGGACG+AGG | 0.531073 | 2_3:+50010790 | Msa0296600:CDS |
TATATTTGCGTTGGCCAAGA+AGG | 0.531197 | 2_3:+50012691 | Msa0296600:CDS |
AGAGTTGCTGCTCAAAATCA+AGG | 0.538986 | 2_3:+50009231 | Msa0296600:intron |
CATTAAAACAAATGAGTTGG+AGG | 0.539871 | 2_3:+50010196 | Msa0296600:CDS |
TATGTTGAACAGCCTTGTCT+AGG | 0.540265 | 2_3:+50013557 | Msa0296600:intron |
TGCACGGGTTGCGTCTGATG+GGG | 0.542811 | 2_3:-50011713 | None:intergenic |
TAATCAGAACCAGCATTGCT+TGG | 0.544910 | 2_3:-50008495 | None:intergenic |
AGTGAAGGAAGAAACAGAAA+AGG | 0.547012 | 2_3:+50009318 | Msa0296600:CDS |
GGTTATTGCAGTGGTCACAT+AGG | 0.551269 | 2_3:-50013812 | None:intergenic |
TCTGAGCTTTCTACCGTGGA+AGG | 0.552547 | 2_3:+50009814 | Msa0296600:CDS |
ATAACTTTGAAGACAATCCA+TGG | 0.553062 | 2_3:+50008057 | Msa0296600:five_prime_UTR |
AAACCTATACAATGATGGGC+AGG | 0.553444 | 2_3:+50011422 | Msa0296600:CDS |
GCAAATTGACTCCTCCAAGC+AGG | 0.555568 | 2_3:-50013785 | None:intergenic |
GTGACTCTCCAGATGAAGCT+TGG | 0.559821 | 2_3:-50013622 | None:intergenic |
GGGAAAACCTATACAATGAT+GGG | 0.560111 | 2_3:+50011418 | Msa0296600:CDS |
TAGGGCGACCGTTGGTGGTG+CGG | 0.560589 | 2_3:-50013700 | None:intergenic |
TTGCAGTGGTCACATAGGCC+AGG | 0.562204 | 2_3:-50013807 | None:intergenic |
TCAGAACCAGCATTGCTTGG+TGG | 0.562815 | 2_3:-50008492 | None:intergenic |
AAGTGATGTTATATTTGCGT+TGG | 0.563963 | 2_3:+50012682 | Msa0296600:CDS |
CGTATGGTCAGACAGGTTCA+GGG | 0.564873 | 2_3:+50011398 | Msa0296600:CDS |
TTAGTAAGAAGAGTACAGAT+TGG | 0.565160 | 2_3:-50008012 | None:intergenic |
GCTGCTCAAAATCAAGGAAG+AGG | 0.565783 | 2_3:+50009237 | Msa0296600:CDS |
ACAAGCTTGCAGCAGTACAA+TGG | 0.565794 | 2_3:+50009781 | Msa0296600:CDS |
CGGAATACAAACTTATAGAA+GGG | 0.567548 | 2_3:+50010548 | Msa0296600:CDS |
AGGCTGGAAATATGAAATGC+AGG | 0.569183 | 2_3:+50011525 | Msa0296600:CDS |
TAGCTCAAGCGAGATTCTGT+AGG | 0.570127 | 2_3:-50013719 | None:intergenic |
ACACCTCGCCGCACCACCAA+CGG | 0.570228 | 2_3:+50013692 | Msa0296600:CDS |
GAAAGAGAAAGCGACCGTAG+TGG | 0.572500 | 2_3:+50009855 | Msa0296600:CDS |
TCGAATATACGGTGTAAATG+AGG | 0.572680 | 2_3:+50012129 | Msa0296600:CDS |
AATGGTCAAGTTGTTCACTT+CGG | 0.574399 | 2_3:-50010177 | None:intergenic |
ATCACTTGTTAAAGAAAGAG+AGG | 0.576557 | 2_3:+50009437 | Msa0296600:CDS |
GAAGCGAGTTGCACCAAGTG+AGG | 0.578583 | 2_3:+50010069 | Msa0296600:CDS |
TATATCTTATCCTACCTCCA+TGG | 0.581883 | 2_3:+50010774 | Msa0296600:CDS |
TTATAGAAGGGGAGAAGCTG+AGG | 0.582041 | 2_3:+50010560 | Msa0296600:CDS |
AGAGAGAGAAACTAGTATTG+TGG | 0.586075 | 2_3:-50008082 | None:intergenic |
AGCACGGACCAACAAGTACA+AGG | 0.586208 | 2_3:+50012429 | Msa0296600:CDS |
TTTGCAAGAGAAATTAGTGA+AGG | 0.588463 | 2_3:+50009303 | Msa0296600:CDS |
TGTTGAATGAGAAATCCAAA+AGG | 0.588663 | 2_3:+50008559 | Msa0296600:CDS |
GAAAGACAGATTTAATTACA+AGG | 0.589185 | 2_3:+50008581 | Msa0296600:CDS |
AGCTCAAGCGAGATTCTGTA+GGG | 0.592663 | 2_3:-50013718 | None:intergenic |
AGAAGAAGCTACAAAACAGA+AGG | 0.592725 | 2_3:+50010016 | Msa0296600:CDS |
GAACTCCAATGAATGGAAGA+AGG | 0.592936 | 2_3:+50008418 | Msa0296600:CDS |
CAATTATTACAGAAATGAGA+AGG | 0.593840 | 2_3:+50009269 | Msa0296600:CDS |
CCAGAAGCTTCCATGGAGGT+AGG | 0.595913 | 2_3:-50010784 | None:intergenic |
ACTTCAGTGCAGTGTGAGTG+AGG | 0.598532 | 2_3:-50008119 | None:intergenic |
ATTTCATATTTCCAGCCTTG+CGG | 0.599929 | 2_3:-50011520 | None:intergenic |
ATTTGCGTTGGCCAAGAAGG+AGG | 0.600719 | 2_3:+50012694 | Msa0296600:CDS |
GTTGAACAGCCTTGTCTAGG+TGG | 0.601251 | 2_3:+50013560 | Msa0296600:intron |
TGAAGGTGTTGTAGGTGTGA+AGG | 0.601680 | 2_3:-50008191 | None:intergenic |
TTGTTAAAGAAAGAGAGGCT+AGG | 0.604021 | 2_3:+50009442 | Msa0296600:CDS |
ACGCTTTAGATCACCTTCCA+CGG | 0.604996 | 2_3:-50009827 | None:intergenic |
AGATTCTGTAGGGCGACCGT+TGG | 0.611082 | 2_3:-50013708 | None:intergenic |
AGTGAGCGTCTTTCAAGGAG+TGG | 0.611359 | 2_3:+50012480 | Msa0296600:CDS |
GCTTGAAACTGCAAATCAGA+AGG | 0.611686 | 2_3:+50009524 | Msa0296600:CDS |
AAGCGAGTTGCACCAAGTGA+GGG | 0.611835 | 2_3:+50010070 | Msa0296600:CDS |
TGTTATCTTGTGATGTAGAG+AGG | 0.614378 | 2_3:+50014111 | Msa0296600:three_prime_UTR |
GTGCAGAAAATGGTACTCCT+GGG | 0.615884 | 2_3:+50011731 | Msa0296600:CDS |
CGACCGTTGGTGGTGCGGCG+AGG | 0.616134 | 2_3:-50013695 | None:intergenic |
TTGGTGCAACTCGCTTCGAA+GGG | 0.619790 | 2_3:-50010063 | None:intergenic |
TTTCACAAGAGAAGATGTTG+AGG | 0.627354 | 2_3:+50008533 | Msa0296600:CDS |
TCAATCAAGCATGATGCCAG+TGG | 0.629434 | 2_3:+50011763 | Msa0296600:CDS |
GGAATACAAACTTATAGAAG+GGG | 0.631482 | 2_3:+50010549 | Msa0296600:CDS |
CAACTTTCATCAGGTAACAA+AGG | 0.634970 | 2_3:-50010733 | None:intergenic |
AGAAACAAGAGTATTTCCAC+TGG | 0.637182 | 2_3:-50011779 | None:intergenic |
TACACTCTCAACATCTACCA+CGG | 0.637474 | 2_3:-50011809 | None:intergenic |
TCATTCTGAGCTTTCTACCG+TGG | 0.639228 | 2_3:+50009810 | Msa0296600:CDS |
GAGACAAGAACAGAATTCGA+AGG | 0.641375 | 2_3:+50010481 | Msa0296600:CDS |
AGACAGTCTCAGCAACCGCA+AGG | 0.643705 | 2_3:+50011505 | Msa0296600:CDS |
ACGACACTATCAGAAGATCT+CGG | 0.646133 | 2_3:+50009486 | Msa0296600:CDS |
TAACCATAGACAGAGCAAGT+TGG | 0.649121 | 2_3:-50009900 | None:intergenic |
TTCGTGTGTTCTGTAGAGTG+CGG | 0.655147 | 2_3:+50010710 | Msa0296600:CDS |
TCTTGTTTCTGATCTTACCG+TGG | 0.662250 | 2_3:+50011792 | Msa0296600:CDS |
TTTGAGTCTCCACCTAGACA+AGG | 0.670015 | 2_3:-50013569 | None:intergenic |
AATATTTGTTCAAGTGAACG+AGG | 0.680505 | 2_3:-50011475 | None:intergenic |
AGAGAGAAACTAGTATTGTG+GGG | 0.692086 | 2_3:-50008080 | None:intergenic |
GAAGGAAGAAACAGAAAAGG+CGG | 0.694656 | 2_3:+50009321 | Msa0296600:CDS |
GATTGCAGAGAACAAACTTG+AGG | 0.702874 | 2_3:+50010357 | Msa0296600:CDS |
TCGTCCAGAAGCTTCCATGG+AGG | 0.737803 | 2_3:-50010788 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGATTGATTATATAAAA+AGG | + | chr2_3:50009005-50009024 | Msa0296600:CDS | 10.0% |
!!! | AATTTGTGATATAATTATTT+TGG | + | chr2_3:50010425-50010444 | Msa0296600:intron | 10.0% |
!! | AAAAAAAAAAAAACATCATA+TGG | - | chr2_3:50012547-50012566 | None:intergenic | 10.0% |
!!! | AAATAATAACAACACTTTTT+TGG | + | chr2_3:50007887-50007906 | Msa0296600:five_prime_UTR | 15.0% |
!! | TAAAATGGAAAATAAATGAT+GGG | - | chr2_3:50008248-50008267 | None:intergenic | 15.0% |
!! | TTAAAATGGAAAATAAATGA+TGG | - | chr2_3:50008249-50008268 | None:intergenic | 15.0% |
!!! | TTATTTTCCATTTTAAGAAA+TGG | + | chr2_3:50008253-50008272 | Msa0296600:intron | 15.0% |
!!! | TATTTTCCATTTTAAGAAAT+GGG | + | chr2_3:50008254-50008273 | Msa0296600:intron | 15.0% |
!! | TAAGTTAAAAGATAAAACAT+TGG | - | chr2_3:50008928-50008947 | None:intergenic | 15.0% |
!!! | TTTTATTATCTTTTGAAACA+AGG | + | chr2_3:50009404-50009423 | Msa0296600:intron | 15.0% |
!!! | GTTTATATCATGTTTTTTTT+CGG | + | chr2_3:50010222-50010241 | Msa0296600:intron | 15.0% |
!!! | AGAATTACATAATACAATTT+TGG | + | chr2_3:50010585-50010604 | Msa0296600:CDS | 15.0% |
!!! | TTTTCTTCATAAAAATTTAC+AGG | + | chr2_3:50011630-50011649 | Msa0296600:intron | 15.0% |
!! | NNNNNNNNNTTATACCAACT+TGG | + | chr2_3:50013401-50013420 | Msa0296600:intron | 15.0% |
!! | TTTACTGATAATATAATGTA+GGG | - | chr2_3:50013995-50014014 | None:intergenic | 15.0% |
!!! | GGTAAAAAAGTAATTTTTTG+TGG | + | chr2_3:50008322-50008341 | Msa0296600:intron | 20.0% |
!!! | TGCTTTTTAATTGTTTGTTT+TGG | + | chr2_3:50008875-50008894 | Msa0296600:intron | 20.0% |
!!! | ACATCATAATTTGTGTTTTT+AGG | + | chr2_3:50008970-50008989 | Msa0296600:intron | 20.0% |
!! | AAAACAAAAATGGAAAGAAA+TGG | - | chr2_3:50009157-50009176 | None:intergenic | 20.0% |
!!! | TTTCTTTCCATTTTTGTTTT+TGG | + | chr2_3:50009157-50009176 | Msa0296600:intron | 20.0% |
!! | GAAAATCTTACAATGTTAAA+GGG | + | chr2_3:50009877-50009896 | Msa0296600:CDS | 20.0% |
!!! | TTTAGTTTTAGGTTATCTTT+GGG | + | chr2_3:50011143-50011162 | Msa0296600:intron | 20.0% |
!!! | ATTAAGTTGTTTATCCAAAT+AGG | + | chr2_3:50011280-50011299 | Msa0296600:intron | 20.0% |
!!! | TTAAGTTGTTTATCCAAATA+GGG | + | chr2_3:50011281-50011300 | Msa0296600:intron | 20.0% |
!! | TGATAAACATGCATATTATA+AGG | - | chr2_3:50011307-50011326 | None:intergenic | 20.0% |
!!! | GTTATTACTTTTTCCTTTAT+AGG | + | chr2_3:50011873-50011892 | Msa0296600:intron | 20.0% |
!!! | TTTATTTCTATTTAGATCTG+TGG | + | chr2_3:50012054-50012073 | Msa0296600:intron | 20.0% |
!!! | TTATTTCTATTTAGATCTGT+GGG | + | chr2_3:50012055-50012074 | Msa0296600:intron | 20.0% |
!!! | ATTATTTTCATAAGCTATCT+TGG | - | chr2_3:50012351-50012370 | None:intergenic | 20.0% |
!! | ATGAAATAGAAAACATCATA+TGG | - | chr2_3:50012582-50012601 | None:intergenic | 20.0% |
!! | AACAATCTTATATTTCAACT+TGG | + | chr2_3:50013142-50013161 | Msa0296600:intron | 20.0% |
!!! | ACAGTTTAGTTTTTTTGTAA+AGG | + | chr2_3:50013247-50013266 | Msa0296600:intron | 20.0% |
!! | TATATTCATGATTTCATTTG+AGG | - | chr2_3:50013757-50013776 | None:intergenic | 20.0% |
!!! | TGTAGAATTAAAGCTAATTT+TGG | - | chr2_3:50013836-50013855 | None:intergenic | 20.0% |
!! | GTTTACTGATAATATAATGT+AGG | - | chr2_3:50013996-50014015 | None:intergenic | 20.0% |
! | AAACAACCCATTTCTTAAAA+TGG | - | chr2_3:50008263-50008282 | None:intergenic | 25.0% |
!! | TAGTTTTCACATTTGTTTAC+TGG | + | chr2_3:50008284-50008303 | Msa0296600:intron | 25.0% |
!!! | TAATTTTTTGTGGTTTTGCA+AGG | + | chr2_3:50008332-50008351 | Msa0296600:intron | 25.0% |
! | AAGAAAGAGAAGAGAAAAAA+TGG | + | chr2_3:50008392-50008411 | Msa0296600:exon | 25.0% |
!! | ATTAAATCTGTCTTTCCTTT+TGG | - | chr2_3:50008577-50008596 | None:intergenic | 25.0% |
! | GAAAGACAGATTTAATTACA+AGG | + | chr2_3:50008581-50008600 | Msa0296600:CDS | 25.0% |
! | TATCAAGTTATTAGTAGTGT+TGG | + | chr2_3:50008751-50008770 | Msa0296600:intron | 25.0% |
!!! | AATTGTTTGTTTTGGTTGTT+TGG | + | chr2_3:50008883-50008902 | Msa0296600:intron | 25.0% |
!!! | ATTGTTTGTTTTGGTTGTTT+GGG | + | chr2_3:50008884-50008903 | Msa0296600:intron | 25.0% |
!!! | TTTGGGATTTTAGATCAAAT+GGG | + | chr2_3:50008901-50008920 | Msa0296600:intron | 25.0% |
! | TGATTATATAAAAAGGCTCA+AGG | + | chr2_3:50009012-50009031 | Msa0296600:CDS | 25.0% |
!! | TATTTCCACACATTTTTGTT+GGG | - | chr2_3:50009116-50009135 | None:intergenic | 25.0% |
!! | GGATTTTCCAAAAACAAAAA+TGG | - | chr2_3:50009167-50009186 | None:intergenic | 25.0% |
! | ATTACTACACAAACATAATG+CGG | - | chr2_3:50009188-50009207 | None:intergenic | 25.0% |
! | ATTATGTTTGTGTAGTAATG+TGG | + | chr2_3:50009189-50009208 | Msa0296600:intron | 25.0% |
! | CAATTATTACAGAAATGAGA+AGG | + | chr2_3:50009269-50009288 | Msa0296600:CDS | 25.0% |
!! | ATTTAGCATCAACCTTTTTA+TGG | - | chr2_3:50009377-50009396 | None:intergenic | 25.0% |
! | CTGGATATTTAATGGAAATA+AGG | - | chr2_3:50009632-50009651 | None:intergenic | 25.0% |
! | CTTATTTCCATTAAATATCC+AGG | + | chr2_3:50009630-50009649 | Msa0296600:intron | 25.0% |
! | GGAAAATCTTACAATGTTAA+AGG | + | chr2_3:50009876-50009895 | Msa0296600:CDS | 25.0% |
! | TGTCTACATAAATAGCAAAA+AGG | - | chr2_3:50010260-50010279 | None:intergenic | 25.0% |
! | TTTGCAAGATAGTCATATAA+AGG | + | chr2_3:50010315-50010334 | Msa0296600:CDS | 25.0% |
!!! | ATTATTTTGGTTCTTCATTC+AGG | + | chr2_3:50010438-50010457 | Msa0296600:intron | 25.0% |
! | AAATGAGTTACAAAAACGAT+TGG | + | chr2_3:50010519-50010538 | Msa0296600:CDS | 25.0% |
! | ATGAAGATAAGTACTTAGTA+AGG | - | chr2_3:50010666-50010685 | None:intergenic | 25.0% |
!!! | ATACTTGTGTTGCTATTTTT+AGG | + | chr2_3:50010903-50010922 | Msa0296600:intron | 25.0% |
!! | CAAATGTGAAAGAATGTTTT+TGG | - | chr2_3:50010929-50010948 | None:intergenic | 25.0% |
!!! | AGTTAAAAGGCTTTAGTTTT+AGG | + | chr2_3:50011132-50011151 | Msa0296600:intron | 25.0% |
!!! | CTTTAGTTTTAGGTTATCTT+TGG | + | chr2_3:50011142-50011161 | Msa0296600:intron | 25.0% |
! | TATGATGTTGAGATCTAATA+AGG | + | chr2_3:50011605-50011624 | Msa0296600:intron | 25.0% |
! | ATGGCTTCAATTATTAATAG+AGG | - | chr2_3:50012168-50012187 | None:intergenic | 25.0% |
!! | AATAAGTTGAAAACAGCTTA+TGG | - | chr2_3:50012316-50012335 | None:intergenic | 25.0% |
! | AACTTCTTTCACTTGTAATT+AGG | + | chr2_3:50012634-50012653 | Msa0296600:intron | 25.0% |
!!! | GAGATACTAATCATTTTTCA+AGG | - | chr2_3:50012817-50012836 | None:intergenic | 25.0% |
!!! | TTTTTCAGTGAAGTTTGTTT+CGG | - | chr2_3:50013006-50013025 | None:intergenic | 25.0% |
! | AGATGAAAAAAACCAAAAAC+TGG | - | chr2_3:50013169-50013188 | None:intergenic | 25.0% |
! | CATTAGCAATTTGATACAAT+GGG | + | chr2_3:50013192-50013211 | Msa0296600:intron | 25.0% |
! | ATTAGCAATTTGATACAATG+GGG | + | chr2_3:50013193-50013212 | Msa0296600:intron | 25.0% |
! | NNNNTTATACCAACTTGGTT+TGG | + | chr2_3:50013406-50013425 | Msa0296600:intron | 25.0% |
! | NNNTTATACCAACTTGGTTT+GGG | + | chr2_3:50013407-50013426 | Msa0296600:intron | 25.0% |
! | AATATATTGTTTAACCTGCT+TGG | + | chr2_3:50013771-50013790 | Msa0296600:three_prime_UTR | 25.0% |
! | TTAACTAAATGCATAGTACT+TGG | - | chr2_3:50013900-50013919 | None:intergenic | 25.0% |
! | ATAATATAATGTAGGGTAAG+TGG | - | chr2_3:50013988-50014007 | None:intergenic | 25.0% |
! | AAACTCAACAATCAAATTGA+TGG | + | chr2_3:50014087-50014106 | Msa0296600:three_prime_UTR | 25.0% |
!! | AAATTTTCAGAGTGTTTGTG+TGG | + | chr2_3:50007972-50007991 | Msa0296600:five_prime_UTR | 30.0% |
! | TTAGTAAGAAGAGTACAGAT+TGG | - | chr2_3:50008015-50008034 | None:intergenic | 30.0% |
! | ATAACTTTGAAGACAATCCA+TGG | + | chr2_3:50008057-50008076 | Msa0296600:five_prime_UTR | 30.0% |
AACACCTTCAAATTGTTCAA+AGG | + | chr2_3:50008204-50008223 | Msa0296600:five_prime_UTR | 30.0% | |
TGTACCTTTGAACAATTTGA+AGG | - | chr2_3:50008211-50008230 | None:intergenic | 30.0% | |
TTACTGGAAGTGAAATTTCT+AGG | + | chr2_3:50008300-50008319 | Msa0296600:intron | 30.0% | |
TACTGGAAGTGAAATTTCTA+GGG | + | chr2_3:50008301-50008320 | Msa0296600:intron | 30.0% | |
AAAGAGAAGAGAAAAAATGG+TGG | + | chr2_3:50008395-50008414 | Msa0296600:exon | 30.0% | |
AAGAGAAGAGAAAAAATGGT+GGG | + | chr2_3:50008396-50008415 | Msa0296600:exon | 30.0% | |
! | CTTTCTTTTGGATTTGGAAA+TGG | + | chr2_3:50008441-50008460 | Msa0296600:CDS | 30.0% |
TGTTGAATGAGAAATCCAAA+AGG | + | chr2_3:50008559-50008578 | Msa0296600:CDS | 30.0% | |
GACAGATTTAATTACAAGGT+TGG | + | chr2_3:50008585-50008604 | Msa0296600:intron | 30.0% | |
ACATAATATCAGTGTTGTGT+CGG | - | chr2_3:50008726-50008745 | None:intergenic | 30.0% | |
GAGATTACAAGATCAAACTA+TGG | - | chr2_3:50008812-50008831 | None:intergenic | 30.0% | |
!! | GTTTGGGATTTTAGATCAAA+TGG | + | chr2_3:50008900-50008919 | Msa0296600:intron | 30.0% |
! | CTATTTCCACACATTTTTGT+TGG | - | chr2_3:50009117-50009136 | None:intergenic | 30.0% |
CAACAAAAATGTGTGGAAAT+AGG | + | chr2_3:50009115-50009134 | Msa0296600:CDS | 30.0% | |
TTTGCAAGAGAAATTAGTGA+AGG | + | chr2_3:50009303-50009322 | Msa0296600:CDS | 30.0% | |
TTGTGCAAAATGCCATAAAA+AGG | + | chr2_3:50009362-50009381 | Msa0296600:intron | 30.0% | |
! | ATCACTTGTTAAAGAAAGAG+AGG | + | chr2_3:50009437-50009456 | Msa0296600:CDS | 30.0% |
AAGCTATCCTGGATATTTAA+TGG | - | chr2_3:50009640-50009659 | None:intergenic | 30.0% | |
ACTGACATGACTATCAATAT+CGG | - | chr2_3:50009665-50009684 | None:intergenic | 30.0% | |
! | CATTGTAAGATTTTCCACTA+CGG | - | chr2_3:50009872-50009891 | None:intergenic | 30.0% |
AAGTTGCATACTAATGAGAA+AGG | - | chr2_3:50009951-50009970 | None:intergenic | 30.0% | |
TTTCTCATTAGTATGCAACT+TGG | + | chr2_3:50009950-50009969 | Msa0296600:intron | 30.0% | |
AAGTTTGCACTTGAGAAATT+TGG | - | chr2_3:50010109-50010128 | None:intergenic | 30.0% | |
AAAGATTCTTCAGAAAAGTC+TGG | + | chr2_3:50010152-50010171 | Msa0296600:CDS | 30.0% | |
GACCATTAAAACAAATGAGT+TGG | + | chr2_3:50010193-50010212 | Msa0296600:CDS | 30.0% | |
!!! | CTCCAACTCATTTGTTTTAA+TGG | - | chr2_3:50010198-50010217 | None:intergenic | 30.0% |
! | CATTAAAACAAATGAGTTGG+AGG | + | chr2_3:50010196-50010215 | Msa0296600:CDS | 30.0% |
CGGAATACAAACTTATAGAA+GGG | + | chr2_3:50010548-50010567 | Msa0296600:CDS | 30.0% | |
GGAATACAAACTTATAGAAG+GGG | + | chr2_3:50010549-50010568 | Msa0296600:CDS | 30.0% | |
TATCAACAAATTTCGTCTCA+GGG | - | chr2_3:50010616-50010635 | None:intergenic | 30.0% | |
TTATCAACAAATTTCGTCTC+AGG | - | chr2_3:50010617-50010636 | None:intergenic | 30.0% | |
!! | GTACTTATCTTCATTTTGAC+AGG | + | chr2_3:50010672-50010691 | Msa0296600:intron | 30.0% |
TAGTCGGTAATAGAGTTAAA+AGG | + | chr2_3:50011119-50011138 | Msa0296600:intron | 30.0% | |
TCTCAAATTTCAAGAATCCT+TGG | - | chr2_3:50011350-50011369 | None:intergenic | 30.0% | |
!! | TTTGAGACATTTTCTTTTCC+AGG | + | chr2_3:50011363-50011382 | Msa0296600:intron | 30.0% |
AATATTTGTTCAAGTGAACG+AGG | - | chr2_3:50011478-50011497 | None:intergenic | 30.0% | |
AATGTAACCGTTGTAATGAT+GGG | - | chr2_3:50011582-50011601 | None:intergenic | 30.0% | |
TAATGTAACCGTTGTAATGA+TGG | - | chr2_3:50011583-50011602 | None:intergenic | 30.0% | |
AAATTTACAGGTGTCAATGT+TGG | + | chr2_3:50011642-50011661 | Msa0296600:intron | 30.0% | |
! | AAGCTAACATACTTTGCTTT+TGG | + | chr2_3:50012003-50012022 | Msa0296600:intron | 30.0% |
!! | TAACATACTTTGCTTTTGGA+TGG | + | chr2_3:50012007-50012026 | Msa0296600:intron | 30.0% |
GTATTCACTCTTCGAATATA+CGG | + | chr2_3:50012118-50012137 | Msa0296600:CDS | 30.0% | |
TAAATCTCATTGATCTTGCT+GGG | + | chr2_3:50012457-50012476 | Msa0296600:CDS | 30.0% | |
ACACTTGAGTTTCTTTCAAT+CGG | - | chr2_3:50012518-50012537 | None:intergenic | 30.0% | |
AAGTGATGTTATATTTGCGT+TGG | + | chr2_3:50012682-50012701 | Msa0296600:CDS | 30.0% | |
AAAGAAAAATCACCTGAAGT+AGG | - | chr2_3:50012754-50012773 | None:intergenic | 30.0% | |
TAAGTGTAGTAAACTGCAAT+AGG | + | chr2_3:50012937-50012956 | Msa0296600:intron | 30.0% | |
CCATTGTATCAAATTGCTAA+TGG | - | chr2_3:50013194-50013213 | None:intergenic | 30.0% | |
CCATTAGCAATTTGATACAA+TGG | + | chr2_3:50013191-50013210 | Msa0296600:intron | 30.0% | |
TTGTAAAGGTAGTTTCGATT+TGG | + | chr2_3:50013261-50013280 | Msa0296600:intron | 30.0% | |
TATTAAAAACACCAACAGCT+AGG | - | chr2_3:50013508-50013527 | None:intergenic | 30.0% | |
AGAGTAAATGCTTGTGAAAT+CGG | + | chr2_3:50013668-50013687 | Msa0296600:CDS | 30.0% | |
GAGAAAGATGAGAATGTGAA+AGG | - | chr2_3:50007948-50007967 | None:intergenic | 35.0% | |
! | GAAGAGTACAGATTGGTATT+TGG | - | chr2_3:50008008-50008027 | None:intergenic | 35.0% |
AGAGAGAAACTAGTATTGTG+GGG | - | chr2_3:50008083-50008102 | None:intergenic | 35.0% | |
GAGAGAGAAACTAGTATTGT+GGG | - | chr2_3:50008084-50008103 | None:intergenic | 35.0% | |
AGAGAGAGAAACTAGTATTG+TGG | - | chr2_3:50008085-50008104 | None:intergenic | 35.0% | |
!! | GAACAATTTGAAGGTGTTGT+AGG | - | chr2_3:50008202-50008221 | None:intergenic | 35.0% |
! | AATGGAAGAAGGCTTTCTTT+TGG | + | chr2_3:50008429-50008448 | Msa0296600:CDS | 35.0% |
! | AGAAGGCTTTCTTTTGGATT+TGG | + | chr2_3:50008435-50008454 | Msa0296600:CDS | 35.0% |
! | TCTTTTGGATTTGGAAATGG+TGG | + | chr2_3:50008444-50008463 | Msa0296600:CDS | 35.0% |
TTTCACAAGAGAAGATGTTG+AGG | + | chr2_3:50008533-50008552 | Msa0296600:CDS | 35.0% | |
CTAACACCTCAAACAACTAA+AGG | - | chr2_3:50008626-50008645 | None:intergenic | 35.0% | |
! | CTTTAGTTGTTTGAGGTGTT+AGG | + | chr2_3:50008624-50008643 | Msa0296600:intron | 35.0% |
! | ACAGATTTTAAATCCCCTCA+AGG | + | chr2_3:50008836-50008855 | Msa0296600:intron | 35.0% |
! | ATTTTAAATCCCCTCAAGGA+CGG | + | chr2_3:50008840-50008859 | Msa0296600:intron | 35.0% |
AGAGAAGTTGAAGAGTTCAT+TGG | + | chr2_3:50009084-50009103 | Msa0296600:CDS | 35.0% | |
ATTGTCCCAACAAAAATGTG+TGG | + | chr2_3:50009108-50009127 | Msa0296600:CDS | 35.0% | |
AGTGAAGGAAGAAACAGAAA+AGG | + | chr2_3:50009318-50009337 | Msa0296600:CDS | 35.0% | |
TTGTTAAAGAAAGAGAGGCT+AGG | + | chr2_3:50009442-50009461 | Msa0296600:CDS | 35.0% | |
GAAGTCTTACAGAGTTTCAT+TGG | + | chr2_3:50009972-50009991 | Msa0296600:intron | 35.0% | |
!! | TTTCATTGGTTGTTTTCCTC+AGG | + | chr2_3:50009986-50010005 | Msa0296600:intron | 35.0% |
AGAAGAAGCTACAAAACAGA+AGG | + | chr2_3:50010016-50010035 | Msa0296600:CDS | 35.0% | |
TTTGCACTTGAGAAATTTGG+CGG | - | chr2_3:50010106-50010125 | None:intergenic | 35.0% | |
! | AATGGTCAAGTTGTTCACTT+CGG | - | chr2_3:50010180-50010199 | None:intergenic | 35.0% |
! | AAAACAAATGAGTTGGAGGT+TGG | + | chr2_3:50010200-50010219 | Msa0296600:intron | 35.0% |
! | AAAGTACATTTTGTCTGCAC+AGG | - | chr2_3:50010298-50010317 | None:intergenic | 35.0% |
TTCTGTTCTTGTCTCAATTG+CGG | - | chr2_3:50010476-50010495 | None:intergenic | 35.0% | |
GCGGAATACAAACTTATAGA+AGG | + | chr2_3:50010547-50010566 | Msa0296600:CDS | 35.0% | |
!! | TCATTTTGACAGGAACTGAA+AGG | + | chr2_3:50010682-50010701 | Msa0296600:intron | 35.0% |
!! | CATTTTGACAGGAACTGAAA+GGG | + | chr2_3:50010683-50010702 | Msa0296600:intron | 35.0% |
CAACTTTCATCAGGTAACAA+AGG | - | chr2_3:50010736-50010755 | None:intergenic | 35.0% | |
TATATCTTATCCTACCTCCA+TGG | + | chr2_3:50010774-50010793 | Msa0296600:CDS | 35.0% | |
! | GGCATTGAATTGACACAAAA+CGG | + | chr2_3:50010811-50010830 | Msa0296600:CDS | 35.0% |
ACTTCTTCTTGTAATGCATC+AGG | - | chr2_3:50010966-50010985 | None:intergenic | 35.0% | |
! | AAGTGCTCTTGATGGTTATA+AGG | + | chr2_3:50011013-50011032 | Msa0296600:CDS | 35.0% |
AATGCACATGAAAGACTGTT+TGG | + | chr2_3:50011195-50011214 | Msa0296600:intron | 35.0% | |
ATGCACATGAAAGACTGTTT+GGG | + | chr2_3:50011196-50011215 | Msa0296600:intron | 35.0% | |
GCATATTATAAGGCCCTATT+TGG | - | chr2_3:50011297-50011316 | None:intergenic | 35.0% | |
TGTATGAATGTTTAGCACCA+AGG | + | chr2_3:50011330-50011349 | Msa0296600:intron | 35.0% | |
AGGGAAAACCTATACAATGA+TGG | + | chr2_3:50011417-50011436 | Msa0296600:CDS | 35.0% | |
GGGAAAACCTATACAATGAT+GGG | + | chr2_3:50011418-50011437 | Msa0296600:CDS | 35.0% | |
ATTTCATATTTCCAGCCTTG+CGG | - | chr2_3:50011523-50011542 | None:intergenic | 35.0% | |
! | TGAAACGATTCGTGATTTGT+TGG | + | chr2_3:50011675-50011694 | Msa0296600:CDS | 35.0% |
!! | AGAAACAAGAGTATTTCCAC+TGG | - | chr2_3:50011782-50011801 | None:intergenic | 35.0% |
! | AGATGTTGAGAGTGTAAAAG+AGG | + | chr2_3:50011816-50011835 | Msa0296600:CDS | 35.0% |
ACACATTGAGAAGCCTATAA+AGG | - | chr2_3:50011889-50011908 | None:intergenic | 35.0% | |
!! | AGCAAAGTATGTTAGCTTGT+AGG | - | chr2_3:50012001-50012020 | None:intergenic | 35.0% |
TCGAATATACGGTGTAAATG+AGG | + | chr2_3:50012129-50012148 | Msa0296600:CDS | 35.0% | |
CATGTTTCTTGTTCATGACT+CGG | + | chr2_3:50012185-50012204 | Msa0296600:intron | 35.0% | |
TCTGCTTGCTTAATTACTTG+TGG | + | chr2_3:50012250-50012269 | Msa0296600:intron | 35.0% | |
CTGCTTGCTTAATTACTTGT+GGG | + | chr2_3:50012251-50012270 | Msa0296600:intron | 35.0% | |
TTGCTTAATTACTTGTGGGA+CGG | + | chr2_3:50012255-50012274 | Msa0296600:intron | 35.0% | |
TTAGAACACCTTGTACTTGT+TGG | - | chr2_3:50012440-50012459 | None:intergenic | 35.0% | |
CTAAATCTCATTGATCTTGC+TGG | + | chr2_3:50012456-50012475 | Msa0296600:CDS | 35.0% | |
AAAGCTTACATACCTACTTC+AGG | + | chr2_3:50012739-50012758 | Msa0296600:CDS | 35.0% | |
!! | TAACGCTTTGGTTTGGATTT+GGG | - | chr2_3:50012981-50013000 | None:intergenic | 35.0% |
!! | TTAACGCTTTGGTTTGGATT+TGG | - | chr2_3:50012982-50013001 | None:intergenic | 35.0% |
TTTGTTTCGGTTTAACGCTT+TGG | - | chr2_3:50012993-50013012 | None:intergenic | 35.0% | |
CTATTTGTCACATTACAGTG+CGG | + | chr2_3:50013090-50013109 | Msa0296600:intron | 35.0% | |
! | TTTCAACTTGGTCCAGTTTT+TGG | + | chr2_3:50013154-50013173 | Msa0296600:intron | 35.0% |
GAGTAAATGCTTGTGAAATC+GGG | + | chr2_3:50013669-50013688 | Msa0296600:CDS | 35.0% | |
ATATTGTTTAACCTGCTTGG+AGG | + | chr2_3:50013774-50013793 | Msa0296600:three_prime_UTR | 35.0% | |
!!! | GCTAATTTTGGTTATTGCAG+TGG | - | chr2_3:50013824-50013843 | None:intergenic | 35.0% |
TGTTATCTTGTGATGTAGAG+AGG | + | chr2_3:50014111-50014130 | Msa0296600:three_prime_UTR | 35.0% | |
GAGTACAGATTGGTATTTGG+TGG | - | chr2_3:50008005-50008024 | None:intergenic | 40.0% | |
!! | GTGGTTTTGCAAGGTTGTAT+TGG | + | chr2_3:50008341-50008360 | Msa0296600:intron | 40.0% |
GAACTCCAATGAATGGAAGA+AGG | + | chr2_3:50008418-50008437 | Msa0296600:CDS | 40.0% | |
GAAAGCCTTCTTCCATTCAT+TGG | - | chr2_3:50008426-50008445 | None:intergenic | 40.0% | |
TAATCAGAACCAGCATTGCT+TGG | - | chr2_3:50008498-50008517 | None:intergenic | 40.0% | |
!! | AGCAATGCTGGTTCTGATTA+TGG | + | chr2_3:50008498-50008517 | Msa0296600:CDS | 40.0% |
GTTGTGCCTTTAGTTGTTTG+AGG | + | chr2_3:50008617-50008636 | Msa0296600:intron | 40.0% | |
! | AGTTGTTTGAGGTGTTAGGT+CGG | + | chr2_3:50008628-50008647 | Msa0296600:intron | 40.0% |
TATGAAGCACATACACTCCT+CGG | + | chr2_3:50008659-50008678 | Msa0296600:intron | 40.0% | |
AATCATACAACCGTCCTTGA+GGG | - | chr2_3:50008853-50008872 | None:intergenic | 40.0% | |
AAATCATACAACCGTCCTTG+AGG | - | chr2_3:50008854-50008873 | None:intergenic | 40.0% | |
AGTAGCTCAACTCAAGATCT+TGG | - | chr2_3:50009054-50009073 | None:intergenic | 40.0% | |
AGAGTTGCTGCTCAAAATCA+AGG | + | chr2_3:50009231-50009250 | Msa0296600:intron | 40.0% | |
GAAGGAAGAAACAGAAAAGG+CGG | + | chr2_3:50009321-50009340 | Msa0296600:CDS | 40.0% | |
!!! | CTTTTGAAACAAGGCTGCAA+TGG | + | chr2_3:50009413-50009432 | Msa0296600:intron | 40.0% |
ACGACACTATCAGAAGATCT+CGG | + | chr2_3:50009486-50009505 | Msa0296600:CDS | 40.0% | |
GCTTGAAACTGCAAATCAGA+AGG | + | chr2_3:50009524-50009543 | Msa0296600:CDS | 40.0% | |
CAATATCGGATAAGCTATCC+TGG | - | chr2_3:50009651-50009670 | None:intergenic | 40.0% | |
! | TTGATAGTCATGTCAGTGTC+AGG | + | chr2_3:50009668-50009687 | Msa0296600:intron | 40.0% |
TAACCATAGACAGAGCAAGT+TGG | - | chr2_3:50009903-50009922 | None:intergenic | 40.0% | |
GATTGCAGAGAACAAACTTG+AGG | + | chr2_3:50010357-50010376 | Msa0296600:CDS | 40.0% | |
AACTTGAGGTGATGACAATG+TGG | + | chr2_3:50010371-50010390 | Msa0296600:intron | 40.0% | |
GAGACAAGAACAGAATTCGA+AGG | + | chr2_3:50010481-50010500 | Msa0296600:CDS | 40.0% | |
AACGGTATATCTCATGATGC+TGG | + | chr2_3:50010829-50010848 | Msa0296600:intron | 40.0% | |
GCCATTGTTCAATTGCTAGT+CGG | + | chr2_3:50011103-50011122 | Msa0296600:intron | 40.0% | |
ACCGACTAGCAATTGAACAA+TGG | - | chr2_3:50011107-50011126 | None:intergenic | 40.0% | |
!! | AAACCTATACAATGATGGGC+AGG | + | chr2_3:50011422-50011441 | Msa0296600:CDS | 40.0% |
! | AGGTATCAAACCCTTTTCTC+CGG | - | chr2_3:50011458-50011477 | None:intergenic | 40.0% |
AGGCTGGAAATATGAAATGC+AGG | + | chr2_3:50011525-50011544 | Msa0296600:CDS | 40.0% | |
! | TTGATTGAGTATTGCTTCCC+AGG | - | chr2_3:50011751-50011770 | None:intergenic | 40.0% |
!! | TCTTGTTTCTGATCTTACCG+TGG | + | chr2_3:50011792-50011811 | Msa0296600:CDS | 40.0% |
TACACTCTCAACATCTACCA+CGG | - | chr2_3:50011812-50011831 | None:intergenic | 40.0% | |
CGAGTCATGAACAAGAAACA+TGG | - | chr2_3:50012187-50012206 | None:intergenic | 40.0% | |
TTGCTATCCTAGAGCTTGTA+TGG | + | chr2_3:50012208-50012227 | Msa0296600:intron | 40.0% | |
AGTCAATCCATACAAGCTCT+AGG | - | chr2_3:50012218-50012237 | None:intergenic | 40.0% | |
TTAATTACTTGTGGGACGGT+TGG | + | chr2_3:50012259-50012278 | Msa0296600:intron | 40.0% | |
AAGCTATCTTGGAGAGCTTA+TGG | - | chr2_3:50012340-50012359 | None:intergenic | 40.0% | |
! | TATATTTGCGTTGGCCAAGA+AGG | + | chr2_3:50012691-50012710 | Msa0296600:CDS | 40.0% |
TGGAATATGATCCTCCTTCT+TGG | - | chr2_3:50012708-50012727 | None:intergenic | 40.0% | |
AGGAGGATCATATTCCATTC+AGG | + | chr2_3:50012711-50012730 | Msa0296600:CDS | 40.0% | |
!! | GTAAGCTTTGAGTTCCTGAA+TGG | - | chr2_3:50012728-50012747 | None:intergenic | 40.0% |
TTCGGTTTAACGCTTTGGTT+TGG | - | chr2_3:50012988-50013007 | None:intergenic | 40.0% | |
CAAACAGAACTGAATCGAAC+TGG | - | chr2_3:50013066-50013085 | None:intergenic | 40.0% | |
CAATGGGGTTCACAAAGAAT+CGG | + | chr2_3:50013208-50013227 | Msa0296600:intron | 40.0% | |
!! | TCGATTTGGAATCACTGAAC+CGG | + | chr2_3:50013275-50013294 | Msa0296600:intron | 40.0% |
! | TATGTTGAACAGCCTTGTCT+AGG | + | chr2_3:50013557-50013576 | Msa0296600:intron | 40.0% |
AAACTAGTATTGTGGGGCCA+TGG | - | chr2_3:50008077-50008096 | None:intergenic | 45.0% | |
!! | ACACTGCACTGAAGTGTTGT+TGG | + | chr2_3:50008127-50008146 | Msa0296600:five_prime_UTR | 45.0% |
!! | CACTGCACTGAAGTGTTGTT+GGG | + | chr2_3:50008128-50008147 | Msa0296600:five_prime_UTR | 45.0% |
!! | TGAAGGTGTTGTAGGTGTGA+AGG | - | chr2_3:50008194-50008213 | None:intergenic | 45.0% |
! | ATGGTGGGAACTCCAATGAA+TGG | + | chr2_3:50008411-50008430 | Msa0296600:CDS | 45.0% |
!! | GGAAATGGTGGACATGATCT+TGG | + | chr2_3:50008456-50008475 | Msa0296600:CDS | 45.0% |
! | TTGCTTGGTGGAGTACTACT+TGG | - | chr2_3:50008483-50008502 | None:intergenic | 45.0% |
ATCATACAACCGTCCTTGAG+GGG | - | chr2_3:50008852-50008871 | None:intergenic | 45.0% | |
GGCTCAAGGTTTGCATTAGA+TGG | + | chr2_3:50009026-50009045 | Msa0296600:CDS | 45.0% | |
GCTGCTCAAAATCAAGGAAG+AGG | + | chr2_3:50009237-50009256 | Msa0296600:CDS | 45.0% | |
AGGCTAGGCTTGACTTTGAA+AGG | + | chr2_3:50009457-50009476 | Msa0296600:CDS | 45.0% | |
ACAAGCTTGCAGCAGTACAA+TGG | + | chr2_3:50009781-50009800 | Msa0296600:CDS | 45.0% | |
TCATTCTGAGCTTTCTACCG+TGG | + | chr2_3:50009810-50009829 | Msa0296600:CDS | 45.0% | |
! | ACGCTTTAGATCACCTTCCA+CGG | - | chr2_3:50009830-50009849 | None:intergenic | 45.0% |
ACAAAAACGATTGGCAGACG+CGG | + | chr2_3:50010528-50010547 | Msa0296600:CDS | 45.0% | |
TTATAGAAGGGGAGAAGCTG+AGG | + | chr2_3:50010560-50010579 | Msa0296600:CDS | 45.0% | |
TTCGTGTGTTCTGTAGAGTG+CGG | + | chr2_3:50010710-50010729 | Msa0296600:CDS | 45.0% | |
TCTGAGCTGCAACTTTCATC+AGG | - | chr2_3:50010745-50010764 | None:intergenic | 45.0% | |
GATGAAAGTTGCAGCTCAGA+AGG | + | chr2_3:50010745-50010764 | Msa0296600:CDS | 45.0% | |
! | CTTGTGCAAAGTGCTCTTGA+TGG | + | chr2_3:50011005-50011024 | Msa0296600:CDS | 45.0% |
CATACGCGAAAATGCAAACC+TGG | - | chr2_3:50011384-50011403 | None:intergenic | 45.0% | |
! | CAGGTTTGCATTTTCGCGTA+TGG | + | chr2_3:50011382-50011401 | Msa0296600:intron | 45.0% |
! | ATTTTCGCGTATGGTCAGAC+AGG | + | chr2_3:50011391-50011410 | Msa0296600:CDS | 45.0% |
! | GGTATCAAACCCTTTTCTCC+GGG | - | chr2_3:50011457-50011476 | None:intergenic | 45.0% |
! | CGTTGTAATGATGGGACTGA+GGG | - | chr2_3:50011574-50011593 | None:intergenic | 45.0% |
CCTCAGTCCCATCATTACAA+CGG | + | chr2_3:50011572-50011591 | Msa0296600:intron | 45.0% | |
!!! | AGGAGTACCATTTTCTGCAC+GGG | - | chr2_3:50011731-50011750 | None:intergenic | 45.0% |
!!! | CAGGAGTACCATTTTCTGCA+CGG | - | chr2_3:50011732-50011751 | None:intergenic | 45.0% |
GTGCAGAAAATGGTACTCCT+GGG | + | chr2_3:50011731-50011750 | Msa0296600:CDS | 45.0% | |
TCAATCAAGCATGATGCCAG+TGG | + | chr2_3:50011763-50011782 | Msa0296600:CDS | 45.0% | |
TAAATCAAGCAGCAAGCAGC+AGG | + | chr2_3:50011851-50011870 | Msa0296600:CDS | 45.0% | |
CTCTTTGTTCTGCTAGAGCA+CGG | + | chr2_3:50012413-50012432 | Msa0296600:intron | 45.0% | |
!! | CCAACTTGGTTTGGGATGAA+CGG | + | chr2_3:50013415-50013434 | Msa0296600:intron | 45.0% |
AGCTAGGACTGTTCATGCTT+CGG | - | chr2_3:50013492-50013511 | None:intergenic | 45.0% | |
TTTGAGTCTCCACCTAGACA+AGG | - | chr2_3:50013572-50013591 | None:intergenic | 45.0% | |
AGCTCAAGCGAGATTCTGTA+GGG | - | chr2_3:50013721-50013740 | None:intergenic | 45.0% | |
TAGCTCAAGCGAGATTCTGT+AGG | - | chr2_3:50013722-50013741 | None:intergenic | 45.0% | |
GGTTATTGCAGTGGTCACAT+AGG | - | chr2_3:50013815-50013834 | None:intergenic | 45.0% | |
ACTTCAGTGCAGTGTGAGTG+AGG | - | chr2_3:50008122-50008141 | None:intergenic | 50.0% | |
AGTACTCCACCAAGCAATGC+TGG | + | chr2_3:50008486-50008505 | Msa0296600:CDS | 50.0% | |
TCAGAACCAGCATTGCTTGG+TGG | - | chr2_3:50008495-50008514 | None:intergenic | 50.0% | |
! | TGTTTGAGGTGTTAGGTCGG+TGG | + | chr2_3:50008631-50008650 | Msa0296600:intron | 50.0% |
CATGACACATATCCGACACC+CGG | - | chr2_3:50008696-50008715 | None:intergenic | 50.0% | |
TCTGAGCTTTCTACCGTGGA+AGG | + | chr2_3:50009814-50009833 | Msa0296600:CDS | 50.0% | |
GAAAGAGAAAGCGACCGTAG+TGG | + | chr2_3:50009855-50009874 | Msa0296600:CDS | 50.0% | |
GCTTCTTCTTGAGAAGCCTG+AGG | - | chr2_3:50010005-50010024 | None:intergenic | 50.0% | |
TTGGTGCAACTCGCTTCGAA+GGG | - | chr2_3:50010066-50010085 | None:intergenic | 50.0% | |
AAGCGAGTTGCACCAAGTGA+GGG | + | chr2_3:50010070-50010089 | Msa0296600:CDS | 50.0% | |
CGTATGGTCAGACAGGTTCA+GGG | + | chr2_3:50011398-50011417 | Msa0296600:CDS | 50.0% | |
AGGCCTGCCCATCATTGTAT+AGG | - | chr2_3:50011428-50011447 | None:intergenic | 50.0% | |
!! | TATACAATGATGGGCAGGCC+TGG | + | chr2_3:50011427-50011446 | Msa0296600:CDS | 50.0% |
! | CCGTTGTAATGATGGGACTG+AGG | - | chr2_3:50011575-50011594 | None:intergenic | 50.0% |
CGTGCAGAAAATGGTACTCC+TGG | + | chr2_3:50011730-50011749 | Msa0296600:CDS | 50.0% | |
AGCACGGACCAACAAGTACA+AGG | + | chr2_3:50012429-50012448 | Msa0296600:CDS | 50.0% | |
AGTGAGCGTCTTTCAAGGAG+TGG | + | chr2_3:50012480-50012499 | Msa0296600:CDS | 50.0% | |
CTTTCAAGGAGTGGCTCAAC+TGG | + | chr2_3:50012489-50012508 | Msa0296600:CDS | 50.0% | |
! | ATTTGCGTTGGCCAAGAAGG+AGG | + | chr2_3:50012694-50012713 | Msa0296600:CDS | 50.0% |
TGTCACATTACAGTGCGGTG+TGG | + | chr2_3:50013095-50013114 | Msa0296600:intron | 50.0% | |
CCGTTCATCCCAAACCAAGT+TGG | - | chr2_3:50013418-50013437 | None:intergenic | 50.0% | |
GACTGTTCATGCTTCGGTTC+GGG | - | chr2_3:50013486-50013505 | None:intergenic | 50.0% | |
GGACTGTTCATGCTTCGGTT+CGG | - | chr2_3:50013487-50013506 | None:intergenic | 50.0% | |
GCATGAACAGTCCTAGCTGT+TGG | + | chr2_3:50013494-50013513 | Msa0296600:intron | 50.0% | |
! | GTTGAACAGCCTTGTCTAGG+TGG | + | chr2_3:50013560-50013579 | Msa0296600:intron | 50.0% |
TCTCCAGATGAAGCTTGGTC+AGG | - | chr2_3:50013620-50013639 | None:intergenic | 50.0% | |
GTGACTCTCCAGATGAAGCT+TGG | - | chr2_3:50013625-50013644 | None:intergenic | 50.0% | |
GAGAGTCACTATGCTCGCTT+CGG | + | chr2_3:50013636-50013655 | Msa0296600:CDS | 50.0% | |
! | GCAAATTGACTCCTCCAAGC+AGG | - | chr2_3:50013788-50013807 | None:intergenic | 50.0% |
CTTGGAGGAGTCAATTTGCC+TGG | + | chr2_3:50013789-50013808 | Msa0296600:three_prime_UTR | 50.0% | |
! | CTCCTCGGATTAGACGTGTC+CGG | + | chr2_3:50008674-50008693 | Msa0296600:intron | 55.0% |
! | TCCTCGGATTAGACGTGTCC+GGG | + | chr2_3:50008675-50008694 | Msa0296600:intron | 55.0% |
GATTAGACGTGTCCGGGTGT+CGG | + | chr2_3:50008681-50008700 | Msa0296600:intron | 55.0% | |
ATCAGTGTCCGTGTCGTGTC+TGG | + | chr2_3:50008777-50008796 | Msa0296600:intron | 55.0% | |
CACAGACACCAGACACGACA+CGG | - | chr2_3:50008788-50008807 | None:intergenic | 55.0% | |
! | GGGCCAACTTGCTCTGTCTA+TGG | + | chr2_3:50009897-50009916 | Msa0296600:CDS | 55.0% |
! | CTTGGTGCAACTCGCTTCGA+AGG | - | chr2_3:50010067-50010086 | None:intergenic | 55.0% |
GAAGCGAGTTGCACCAAGTG+AGG | + | chr2_3:50010069-50010088 | Msa0296600:CDS | 55.0% | |
GGTCTCGATCATCCCTCACT+TGG | - | chr2_3:50010085-50010104 | None:intergenic | 55.0% | |
CCAGAAGCTTCCATGGAGGT+AGG | - | chr2_3:50010787-50010806 | None:intergenic | 55.0% | |
CCTACCTCCATGGAAGCTTC+TGG | + | chr2_3:50010784-50010803 | Msa0296600:CDS | 55.0% | |
TCGTCCAGAAGCTTCCATGG+AGG | - | chr2_3:50010791-50010810 | None:intergenic | 55.0% | |
TCCATGGAAGCTTCTGGACG+AGG | + | chr2_3:50010790-50010809 | Msa0296600:CDS | 55.0% | |
GCGTATGGTCAGACAGGTTC+AGG | + | chr2_3:50011397-50011416 | Msa0296600:CDS | 55.0% | |
CCTGGACATCCCGGAGAAAA+GGG | + | chr2_3:50011445-50011464 | Msa0296600:CDS | 55.0% | |
AGACAGTCTCAGCAACCGCA+AGG | + | chr2_3:50011505-50011524 | Msa0296600:CDS | 55.0% | |
GACGCAACCCGTGCAGAAAA+TGG | + | chr2_3:50011721-50011740 | Msa0296600:CDS | 55.0% | |
CTGGGAGTGAGCGTCTTTCA+AGG | + | chr2_3:50012475-50012494 | Msa0296600:CDS | 55.0% | |
ACAGTGCGGTGTGGTTCAGT+TGG | + | chr2_3:50013104-50013123 | Msa0296600:intron | 55.0% | |
GCTCCTGACCAAGCTTCATC+TGG | + | chr2_3:50013614-50013633 | Msa0296600:CDS | 55.0% | |
AGATTCTGTAGGGCGACCGT+TGG | - | chr2_3:50013711-50013730 | None:intergenic | 55.0% | |
TTGCAGTGGTCACATAGGCC+AGG | - | chr2_3:50013810-50013829 | None:intergenic | 55.0% | |
ACCCGGACACGTCTAATCCG+AGG | - | chr2_3:50008679-50008698 | None:intergenic | 60.0% | |
GCCTCGTCCAGAAGCTTCCA+TGG | - | chr2_3:50010794-50010813 | None:intergenic | 60.0% | |
GCCTGGACATCCCGGAGAAA+AGG | + | chr2_3:50011444-50011463 | Msa0296600:CDS | 60.0% | |
! | CCCTTTTCTCCGGGATGTCC+AGG | - | chr2_3:50011448-50011467 | None:intergenic | 60.0% |
AGTCTCAGCAACCGCAAGGC+TGG | + | chr2_3:50011509-50011528 | Msa0296600:CDS | 60.0% | |
! | TGCACGGGTTGCGTCTGATG+GGG | - | chr2_3:50011716-50011735 | None:intergenic | 60.0% |
! | CTGCACGGGTTGCGTCTGAT+GGG | - | chr2_3:50011717-50011736 | None:intergenic | 60.0% |
! | TCTGCACGGGTTGCGTCTGA+TGG | - | chr2_3:50011718-50011737 | None:intergenic | 60.0% |
TTCTGTAGGGCGACCGTTGG+TGG | - | chr2_3:50013708-50013727 | None:intergenic | 60.0% | |
ATGGGCAGGCCTGGACATCC+CGG | + | chr2_3:50011436-50011455 | Msa0296600:CDS | 65.0% | |
ACACCTCGCCGCACCACCAA+CGG | + | chr2_3:50013692-50013711 | Msa0296600:CDS | 65.0% | |
!! | TAGGGCGACCGTTGGTGGTG+CGG | - | chr2_3:50013703-50013722 | None:intergenic | 65.0% |
!! | CGACCGTTGGTGGTGCGGCG+AGG | - | chr2_3:50013698-50013717 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 50007843 | 50014190 | 50007843 | ID=Msa0296600;Name=Msa0296600 |
chr2_3 | mRNA | 50007843 | 50014190 | 50007843 | ID=Msa0296600-mRNA-1;Parent=Msa0296600;Name=Msa0296600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=440|1|1|1|0.93|0.88|17|442|761 |
chr2_3 | exon | 50007843 | 50008225 | 50007843 | ID=Msa0296600-mRNA-1:exon:15696;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50008354 | 50008602 | 50008354 | ID=Msa0296600-mRNA-1:exon:15697;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50008992 | 50009136 | 50008992 | ID=Msa0296600-mRNA-1:exon:15698;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50009233 | 50009342 | 50009233 | ID=Msa0296600-mRNA-1:exon:15699;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50009426 | 50009545 | 50009426 | ID=Msa0296600-mRNA-1:exon:15700;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50009736 | 50009918 | 50009736 | ID=Msa0296600-mRNA-1:exon:15701;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50010008 | 50010217 | 50010008 | ID=Msa0296600-mRNA-1:exon:15702;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50010304 | 50010378 | 50010304 | ID=Msa0296600-mRNA-1:exon:15703;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50010460 | 50010606 | 50010460 | ID=Msa0296600-mRNA-1:exon:15704;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50010694 | 50010832 | 50010694 | ID=Msa0296600-mRNA-1:exon:15705;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50010925 | 50011034 | 50010925 | ID=Msa0296600-mRNA-1:exon:15706;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50011385 | 50011546 | 50011385 | ID=Msa0296600-mRNA-1:exon:15707;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50011652 | 50011872 | 50011652 | ID=Msa0296600-mRNA-1:exon:15708;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50012069 | 50012150 | 50012069 | ID=Msa0296600-mRNA-1:exon:15709;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50012429 | 50012533 | 50012429 | ID=Msa0296600-mRNA-1:exon:15710;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50012656 | 50012760 | 50012656 | ID=Msa0296600-mRNA-1:exon:15711;Parent=Msa0296600-mRNA-1 |
chr2_3 | exon | 50013569 | 50014190 | 50013569 | ID=Msa0296600-mRNA-1:exon:15712;Parent=Msa0296600-mRNA-1 |
chr2_3 | five_prime_UTR | 50007843 | 50008225 | 50007843 | ID=Msa0296600-mRNA-1:five_prime_utr;Parent=Msa0296600-mRNA-1 |
chr2_3 | five_prime_UTR | 50008354 | 50008410 | 50008354 | ID=Msa0296600-mRNA-1:five_prime_utr;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50008411 | 50008602 | 50008411 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50008992 | 50009136 | 50008992 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50009233 | 50009342 | 50009233 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50009426 | 50009545 | 50009426 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50009736 | 50009918 | 50009736 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50010008 | 50010217 | 50010008 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50010304 | 50010378 | 50010304 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50010460 | 50010606 | 50010460 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50010694 | 50010832 | 50010694 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50010925 | 50011034 | 50010925 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50011385 | 50011546 | 50011385 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50011652 | 50011872 | 50011652 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50012069 | 50012150 | 50012069 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50012429 | 50012533 | 50012429 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50012656 | 50012760 | 50012656 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | CDS | 50013569 | 50013748 | 50013569 | ID=Msa0296600-mRNA-1:cds;Parent=Msa0296600-mRNA-1 |
chr2_3 | three_prime_UTR | 50013749 | 50014190 | 50013749 | ID=Msa0296600-mRNA-1:three_prime_utr;Parent=Msa0296600-mRNA-1 |
Gene Sequence |
Protein sequence |