AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333120 MtrunA17_Chr4g0068951 99.602 502 2 0 1 502 1 502 0.0 1015
Msa1333120 MtrunA17_Chr2g0294661 35.892 482 286 11 26 490 72 547 5.65e-76 249
Msa1333120 MtrunA17_Chr4g0068201 35.388 503 294 11 5 490 56 544 6.30e-76 249
Msa1333120 MtrunA17_Chr6g0462411 31.263 467 285 10 40 486 26 476 3.24e-61 208
Msa1333120 MtrunA17_Chr1g0184771 27.959 490 320 11 15 486 47 521 6.23e-49 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333120 AT1G48030.2 85.827 508 65 4 1 502 1 507 0.0 874
Msa1333120 AT1G48030.5 85.827 508 65 4 1 502 1 507 0.0 874
Msa1333120 AT1G48030.3 85.827 508 65 4 1 502 1 507 0.0 874
Msa1333120 AT1G48030.1 85.827 508 65 4 1 502 1 507 0.0 874
Msa1333120 AT1G48030.4 85.827 508 65 4 1 502 1 507 0.0 874
Msa1333120 AT3G17240.1 85.630 508 66 3 1 502 1 507 0.0 872
Msa1333120 AT3G17240.3 85.630 508 66 3 1 502 1 507 0.0 872
Msa1333120 AT3G16950.1 34.989 463 257 11 55 490 103 548 6.92e-73 241
Msa1333120 AT4G16155.1 35.637 463 253 12 55 490 101 545 7.11e-73 241
Msa1333120 AT3G16950.2 34.989 463 257 11 55 490 103 548 2.11e-72 241
Msa1333120 AT3G24170.1 29.374 463 299 11 40 486 27 477 5.90e-53 187
Msa1333120 AT3G24170.2 29.374 463 299 11 40 486 27 477 5.90e-53 187
Msa1333120 AT3G24170.3 29.374 463 299 11 40 486 27 477 5.90e-53 187
Msa1333120 AT3G54660.1 27.400 500 323 11 9 486 53 534 4.22e-43 161
Msa1333120 AT3G17240.2 73.196 97 19 3 1 91 1 96 3.23e-32 120

Find 185 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACTTCTGGACTTAATT+TGG 0.142487 8_4:-53163531 Msa1333120:CDS
CCCAAGAAGCTTGTAGTTAT+TGG 0.185023 8_4:-53163839 Msa1333120:CDS
CCAATGACATAAATATTTCT+TGG 0.253869 8_4:-53165752 Msa1333120:five_prime_UTR
CCCAATAACTACAAGCTTCT+TGG 0.257682 8_4:+53163838 None:intergenic
GTGGTTGGAGTTGATACTTC+TGG 0.261463 8_4:-53163647 Msa1333120:CDS
CCAAGAAGCTTGTAGTTATT+GGG 0.265755 8_4:-53163838 Msa1333120:CDS
CCTTTGTGGAGGGCCATTAT+TGG 0.278288 8_4:+53165787 None:intergenic
TGACAAGGTAGGACGCATTT+TGG 0.289967 8_4:-53163489 Msa1333120:CDS
ACCAAGCTGAGCAGCTTTAA+TGG 0.289980 8_4:+53165427 None:intergenic
CCAAGAAATATTTATGTCAT+TGG 0.309619 8_4:+53165752 None:intergenic
GGTAGGACTCCATTCACTTC+TGG 0.310454 8_4:-53163542 Msa1333120:CDS
TTCATCTTCCTTTGTTCACT+TGG 0.317699 8_4:-53162663 Msa1333120:three_prime_UTR
ATCGCAGATTGTTCCATCTA+TGG 0.318072 8_4:-53163741 Msa1333120:CDS
GACAACATCTGCTTCAATTA+TGG 0.320224 8_4:+53163577 None:intergenic
TTATAAATATTAAAGAAAAT+AGG 0.320426 8_4:-53165693 Msa1333120:five_prime_UTR
AAAGGCTGAATTTGCATTGC+AGG 0.320989 8_4:-53165851 Msa1333120:five_prime_UTR
AAGAAAATTGTATCATCAAC+AGG 0.323435 8_4:-53163884 Msa1333120:CDS
TGTGTGTTAAATTTAGATTC+AGG 0.327781 8_4:-53162880 Msa1333120:three_prime_UTR
CTTTGTGGAGGGCCATTATT+GGG 0.328504 8_4:+53165788 None:intergenic
AGGTCAAGAGGTTTCGCTTC+CGG 0.337458 8_4:-53165506 Msa1333120:CDS
CGGATTTCTCCATCCATAGA+TGG 0.346076 8_4:+53163728 None:intergenic
AAGGAGACAGACAAAATATT+GGG 0.348798 8_4:-53163149 Msa1333120:CDS
TGTTGGGAAGTTCCCTTTCA+TGG 0.353483 8_4:-53163231 Msa1333120:CDS
GAGGAGCAGGTTAAGGAAAC+TGG 0.355744 8_4:-53163266 Msa1333120:CDS
CAGGCTCTTCAAATGTGAAT+TGG 0.356810 8_4:+53162969 None:intergenic
AAAGGAGACAGACAAAATAT+TGG 0.357543 8_4:-53163150 Msa1333120:CDS
AATTGCCTTCGCCCTGCTAT+TGG 0.359778 8_4:+53163208 None:intergenic
CCAATAACTACAAGCTTCTT+GGG 0.362478 8_4:+53163839 None:intergenic
TTAACAGCCTCACTCATTGT+TGG 0.377486 8_4:+53163020 None:intergenic
GCAATTGGTGATGTAATTCC+CGG 0.389033 8_4:-53163428 Msa1333120:CDS
ATGAATGAGTTCTCCTGCAT+TGG 0.396625 8_4:+53163109 None:intergenic
GGCTAGAGATGGGCTCTGTA+TGG 0.404513 8_4:-53163802 Msa1333120:CDS
TCCCTTTCATGGCCAATAGC+AGG 0.405072 8_4:-53163220 Msa1333120:CDS
TGTCAAGATAATTGCTGAAA+AGG 0.408222 8_4:-53163168 Msa1333120:CDS
GAAGATGAAAATAAATCATA+TGG 0.409180 8_4:+53162677 None:intergenic
GGCTCTGTATGGGGACGAAT+TGG 0.414655 8_4:-53163791 Msa1333120:CDS
TGGTTGGAGTTGATACTTCT+GGG 0.417457 8_4:-53163646 Msa1333120:CDS
CGAAGTCAAGGTAAAATCCT+TGG 0.419162 8_4:+53162914 None:intergenic
AATATTTATGTCATTGGACT+TGG 0.421046 8_4:+53165758 None:intergenic
TCCGTTACACTTTCTCTCTA+AGG 0.422319 8_4:-53165526 Msa1333120:CDS
GGACTTAATTTGGACAAGAT+AGG 0.423938 8_4:-53163521 Msa1333120:CDS
GAAGACAGAGGAGCAGGTTA+AGG 0.424716 8_4:-53163273 Msa1333120:CDS
GCTAGAGATGGGCTCTGTAT+GGG 0.427257 8_4:-53163801 Msa1333120:CDS
GGACTTGGATGATGCCTTTG+TGG 0.427326 8_4:+53165773 None:intergenic
GTCATCATCGGTGGTGGTCC+CGG 0.435774 8_4:-53165464 Msa1333120:CDS
TGTTGAGTACTTAGCTGGTA+AGG 0.436084 8_4:-53163363 Msa1333120:CDS
GCCATTAAAGCTGCTCAGCT+TGG 0.436823 8_4:-53165428 Msa1333120:CDS
GTTATTGGGGCAGGTTACAT+TGG 0.436835 8_4:-53163824 Msa1333120:CDS
CTGGAGTTCAATACCGTGTT+GGG 0.438229 8_4:-53163247 Msa1333120:CDS
AACGATGGCTATGGCGAACT+TGG 0.445916 8_4:-53165591 Msa1333120:exon
GAGAACGCTGAAACTGCTTC+CGG 0.449447 8_4:+53163708 None:intergenic
AACATTCATTTGCCAACCAT+GGG 0.450908 8_4:-53164168 Msa1333120:CDS
AATCGAAATGGAACCTTGGA+AGG 0.456741 8_4:+53165338 None:intergenic
GTCTGTTCACCACCAGCTGC+TGG 0.459349 8_4:+53163599 None:intergenic
AATCTGACCCGGGGTATTGA+AGG 0.459866 8_4:-53164079 Msa1333120:CDS
CAAGAGAATAAAGAAGCAAC+AGG 0.460671 8_4:+53162950 None:intergenic
TCTGCCTTGTGTGCCAACAT+TGG 0.464020 8_4:+53163404 None:intergenic
AGTACTTAGCTGGTAAGGTT+GGG 0.465511 8_4:-53163358 Msa1333120:CDS
GCTTGTGTTGAGTACTTAGC+TGG 0.469925 8_4:-53163368 Msa1333120:CDS
ATATGGATCACTCAAATTGT+TGG 0.470792 8_4:+53162694 None:intergenic
TTATTGGGGCAGGTTACATT+GGG 0.471150 8_4:-53163823 Msa1333120:CDS
CGTTGGTTGCATCCCTTCCA+AGG 0.471575 8_4:-53165351 Msa1333120:intron
CATATTATGGCACCCAATGC+AGG 0.471769 8_4:-53163122 Msa1333120:CDS
TTCCCTACAGAAGCAACCTC+GGG 0.473270 8_4:+53163293 None:intergenic
CTGAATTTGCATTGCAGGTG+AGG 0.473656 8_4:-53165846 Msa1333120:five_prime_UTR
GGAGTTGATACTTCTGGGGA+TGG 0.475245 8_4:-53163641 Msa1333120:CDS
CAAATGAATGTTTAGCCTCA+TGG 0.478496 8_4:+53164179 None:intergenic
TGAATGAGTTCTCCTGCATT+GGG 0.481793 8_4:+53163110 None:intergenic
AGGTTACATTGGGCTAGAGA+TGG 0.486720 8_4:-53163813 Msa1333120:CDS
GAGTACTTAGCTGGTAAGGT+TGG 0.487434 8_4:-53163359 Msa1333120:CDS
CGGTCCAATGTTGGCACACA+AGG 0.493606 8_4:-53163408 Msa1333120:CDS
GTCTCGGGTGTCTATGCAAT+TGG 0.495457 8_4:-53163443 Msa1333120:CDS
GGCGAACTTGGCTCGTAGGA+AGG 0.497240 8_4:-53165579 Msa1333120:CDS
CCCTGCTATTGGCCATGAAA+GGG 0.502849 8_4:+53163219 None:intergenic
ATCGAAAAGCGTGGTGCTCT+TGG 0.503316 8_4:-53165389 Msa1333120:CDS
ATAGACACCCGAGACATTTG+TGG 0.506046 8_4:+53163451 None:intergenic
ACCCCGAGGTTGCTTCTGTA+GGG 0.507942 8_4:-53163295 Msa1333120:CDS
TGTAGGGAAGACAGAGGAGC+AGG 0.508653 8_4:-53163279 Msa1333120:CDS
GGGTTCCGCTCTTCTTTCAT+CGG 0.511274 8_4:-53165558 Msa1333120:CDS
GATGTTGTCCTTGTATCTGC+TGG 0.512028 8_4:-53163563 Msa1333120:CDS
GCCCTGCTATTGGCCATGAA+AGG 0.515476 8_4:+53163218 None:intergenic
TAATATATATCTCTCCTCTC+AGG 0.519824 8_4:-53162772 Msa1333120:three_prime_UTR
GAAAACGACGTCGTCATCAT+CGG 0.520382 8_4:-53165476 Msa1333120:CDS
CTAGAGATGGGCTCTGTATG+GGG 0.523383 8_4:-53163800 Msa1333120:CDS
GTAACATATGTCAAAGGATA+CGG 0.525267 8_4:-53164037 Msa1333120:CDS
CAGCGTTCTCTTGAAAAGCA+AGG 0.526866 8_4:-53163695 Msa1333120:CDS
CATCTATGGATGGAGAAATC+CGG 0.528587 8_4:-53163727 Msa1333120:CDS
GCACACAAGGCAGAAGAAGA+TGG 0.528923 8_4:-53163395 Msa1333120:CDS
CCCTTTCATGGCCAATAGCA+GGG 0.531192 8_4:-53163219 Msa1333120:CDS
CATTTGAAACTTTGACCCCA+TGG 0.533125 8_4:+53164152 None:intergenic
GAAAAGCGTGGTGCTCTTGG+TGG 0.534842 8_4:-53165386 Msa1333120:CDS
TGAAACTTTGACCCCATGGT+TGG 0.535838 8_4:+53164156 None:intergenic
AGCTGGTAAGGTTGGGCATG+TGG 0.543166 8_4:-53163351 Msa1333120:CDS
AAGCTTGTAGTTATTGGGGC+AGG 0.545180 8_4:-53163833 Msa1333120:CDS
TGAATTTGCATTGCAGGTGA+GGG 0.546116 8_4:-53165845 Msa1333120:five_prime_UTR
CTTCCCTACAGAAGCAACCT+CGG 0.546875 8_4:+53163292 None:intergenic
GGTTACATTGGGCTAGAGAT+GGG 0.547643 8_4:-53163812 Msa1333120:CDS
AAAATTCCTTTCACCATCTG+AGG 0.547911 8_4:-53164014 Msa1333120:CDS
AAACATTCATTTGCCAACCA+TGG 0.549901 8_4:-53164169 Msa1333120:CDS
CAAATTGTTGGTCAGAAGCG+TGG 0.550148 8_4:+53162706 None:intergenic
CTAACTGTTGAACCAGCAGC+TGG 0.550199 8_4:-53163611 Msa1333120:CDS
AATGGCGGCGACGTAACCGC+CGG 0.551240 8_4:+53165445 None:intergenic
GATGCAACCAACGTTGAGAC+AGG 0.551664 8_4:+53165361 None:intergenic
AAGCTGTTTCTAATCTGACC+CGG 0.552292 8_4:-53164090 Msa1333120:CDS
TTGGATGATGCCTTTGTGGA+GGG 0.553519 8_4:+53165777 None:intergenic
CTATGGCGAACTTGGCTCGT+AGG 0.555334 8_4:-53165583 Msa1333120:CDS
GAGTCCTACCAGCAGATACA+AGG 0.558562 8_4:+53163555 None:intergenic
GTCTCTGTAGACACCGTTGA+AGG 0.558670 8_4:-53163992 Msa1333120:CDS
AAGCTGAATACCAAGGTGGT+TGG 0.558857 8_4:-53163662 Msa1333120:CDS
GCGAACTTGGCTCGTAGGAA+GGG 0.560636 8_4:-53165578 Msa1333120:CDS
TTGTCCTTGTATCTGCTGGT+AGG 0.563808 8_4:-53163559 Msa1333120:CDS
GATTGACTTAGCTGCCATGA+TGG 0.564118 8_4:-53164125 Msa1333120:CDS
ATGGCGGCGACGTAACCGCC+GGG 0.564412 8_4:+53165446 None:intergenic
AACCCCGAGGTTGCTTCTGT+AGG 0.567406 8_4:-53163296 Msa1333120:CDS
AAGAATCTTAACGATGGCTA+TGG 0.567804 8_4:-53165600 Msa1333120:exon
AAATTAAGTCCAGAAGTGAA+TGG 0.568714 8_4:+53163533 None:intergenic
AAATAGGCCTTCAATACCCC+GGG 0.569237 8_4:+53164072 None:intergenic
TGTAATTCCCGGTCCAATGT+TGG 0.569254 8_4:-53163417 Msa1333120:CDS
ACTTTCTCTCTAAGGTCAAG+AGG 0.569811 8_4:-53165518 Msa1333120:CDS
GTTTAGCCTCATGGTACATG+TGG 0.570391 8_4:+53164188 None:intergenic
CAAGAAGCTTGTAGTTATTG+GGG 0.570780 8_4:-53163837 Msa1333120:CDS
AGCTGTTTCTAATCTGACCC+GGG 0.571089 8_4:-53164089 Msa1333120:CDS
TGTGGACTATGACAAAGTAC+CGG 0.573601 8_4:-53163333 Msa1333120:CDS
TAAATAGGCCTTCAATACCC+CGG 0.573925 8_4:+53164071 None:intergenic
GGCTGTTAAAGAAGCCGCAA+TGG 0.578312 8_4:-53163006 Msa1333120:CDS
GACGTCGTCATCATCGGTGG+TGG 0.579886 8_4:-53165470 Msa1333120:CDS
CAGAGACCTCAGATGGTGAA+AGG 0.580741 8_4:+53164008 None:intergenic
CTTGTGTGCCAACATTGGAC+CGG 0.581579 8_4:+53163409 None:intergenic
AAATTGTTGGTCAGAAGCGT+GGG 0.582349 8_4:+53162707 None:intergenic
AACGTATCTTCTCGAAGTCA+AGG 0.584342 8_4:+53162902 None:intergenic
CTTGGATGATGCCTTTGTGG+AGG 0.584619 8_4:+53165776 None:intergenic
CAGATTGTTCCATCTATGGA+TGG 0.587721 8_4:-53163737 Msa1333120:CDS
ACTGGAGTTCAATACCGTGT+TGG 0.590339 8_4:-53163248 Msa1333120:CDS
GAGATATATATTATTCAGCA+AGG 0.591234 8_4:+53162782 None:intergenic
AACAAGGTAACATATGTCAA+AGG 0.591345 8_4:-53164043 Msa1333120:CDS
AAGCATATCATTATAGCCAC+CGG 0.595212 8_4:-53163947 Msa1333120:CDS
TTCCGCTCTTCTTTCATCGG+CGG 0.602872 8_4:-53165555 Msa1333120:CDS
GTGAATTGGCTTGTCATAAG+TGG 0.602908 8_4:+53162983 None:intergenic
GGTGAAAATACTGTTGTGAA+AGG 0.605474 8_4:-53163971 Msa1333120:CDS
CATGGCCAATAGCAGGGCGA+AGG 0.605899 8_4:-53163213 Msa1333120:CDS
CCAATAATGGCCCTCCACAA+AGG 0.609921 8_4:-53165787 Msa1333120:five_prime_UTR
GGTTGGAGTTGATACTTCTG+GGG 0.615833 8_4:-53163645 Msa1333120:CDS
CAATAACTACAAGCTTCTTG+GGG 0.618034 8_4:+53163840 None:intergenic
CTAATAAGAATAGAAAGCAA+AGG 0.619702 8_4:-53165869 None:intergenic
GGTGGTACCTGTCTCAACGT+TGG 0.621896 8_4:-53165368 Msa1333120:CDS
AGTATCAACTCCAACCACCT+TGG 0.623456 8_4:+53163652 None:intergenic
ATGGGGACGAATTGGCTCTG+AGG 0.627284 8_4:-53163783 Msa1333120:CDS
GTGGACTATGACAAAGTACC+GGG 0.627905 8_4:-53163332 Msa1333120:CDS
ACCTTAGAGAGAAAGTGTAA+CGG 0.630266 8_4:+53165525 None:intergenic
AAGGCAATTGATAACGCTGA+AGG 0.632613 8_4:-53163194 Msa1333120:CDS
TTGTGTGCCAACATTGGACC+GGG 0.636415 8_4:+53163410 None:intergenic
GGAGTTGAAACTGACAAGGT+AGG 0.637183 8_4:-53163500 Msa1333120:CDS
TGGGGTCAAAGTTTCAAATG+TGG 0.638191 8_4:-53164149 Msa1333120:CDS
TCAGATGTAAAATCTCTACC+TGG 0.641837 8_4:-53163923 Msa1333120:CDS
AGGAGACAGACAAAATATTG+GGG 0.643071 8_4:-53163148 Msa1333120:CDS
AGAAAATTGTATCATCAACA+GGG 0.647191 8_4:-53163883 Msa1333120:CDS
TAGAAGAAGAATCTTAACGA+TGG 0.649345 8_4:-53165606 Msa1333120:exon
GTGTCTACAGAGACCTCAGA+TGG 0.651528 8_4:+53164001 None:intergenic
AACTTAAACCAAGTGAACAA+AGG 0.652140 8_4:+53162655 None:intergenic
ATTACAAGATTGCTCCTGAG+AGG 0.653847 8_4:+53162758 None:intergenic
AACGACGTCGTCATCATCGG+TGG 0.658246 8_4:-53165473 Msa1333120:CDS
TGCACATCCAACAATGAGTG+AGG 0.658611 8_4:-53163027 Msa1333120:CDS
TTTAGCCTCATGGTACATGT+GGG 0.660235 8_4:+53164189 None:intergenic
GCAGTATGATGCATCAAGTG+AGG 0.668547 8_4:-53163069 Msa1333120:CDS
GCTGTTTCTAATCTGACCCG+GGG 0.668806 8_4:-53164088 Msa1333120:CDS
TGAAAGGGAACTTCCCAACA+CGG 0.669482 8_4:+53163234 None:intergenic
GGGTTTGTATAGACAACACC+CGG 0.670467 8_4:+53163314 None:intergenic
ATCGAAATGGAACCTTGGAA+GGG 0.671194 8_4:+53165339 None:intergenic
ACCACTTGCATCGAAAAGCG+TGG 0.672031 8_4:-53165398 Msa1333120:CDS
CTCCGCCGATGAAAGAAGAG+CGG 0.675152 8_4:+53165553 None:intergenic
GAAATTCAAGCTGAATACCA+AGG 0.679504 8_4:-53163669 Msa1333120:CDS
GAAAATTGTATCATCAACAG+GGG 0.680955 8_4:-53163882 Msa1333120:CDS
CTTGTCATAAGTGGCCATTG+CGG 0.687064 8_4:+53162992 None:intergenic
TGCATCATACTGCAATGCAA+TGG 0.690908 8_4:+53163079 None:intergenic
TCCCTACAGAAGCAACCTCG+GGG 0.694823 8_4:+53163294 None:intergenic
AAGCTGAGCAGCTTTAATGG+CGG 0.697561 8_4:+53165430 None:intergenic
ACTGTTGAACCAGCAGCTGG+TGG 0.697745 8_4:-53163608 Msa1333120:CDS
ACATTCATTTGCCAACCATG+GGG 0.697828 8_4:-53164167 Msa1333120:CDS
GATAGGAGTTGAAACTGACA+AGG 0.698372 8_4:-53163504 Msa1333120:CDS
ATCATCGGTGGTGGTCCCGG+CGG 0.698397 8_4:-53165461 Msa1333120:CDS
TGCTTCTGTAGGGAAGACAG+AGG 0.698830 8_4:-53163285 Msa1333120:CDS
TTCTTCCCACATGTACCATG+AGG 0.705759 8_4:-53164194 Msa1333120:CDS
GGAGACAGACAAAATATTGG+GGG 0.714541 8_4:-53163147 Msa1333120:CDS
ATTCAAGCTGAATACCAAGG+TGG 0.721568 8_4:-53163666 Msa1333120:CDS
TGTTGTCTATACAAACCCCG+AGG 0.774648 8_4:-53163309 Msa1333120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTATTAAAATAATACAT+GGG + chr8_4:53164211-53164230 None:intergenic 10.0%
!! ATTACTATTAAAATAATACA+TGG + chr8_4:53164212-53164231 None:intergenic 10.0%
!! ATATTAAAAAATCCCAATAA+TGG - chr8_4:53162665-53162684 Msa1333120:three_prime_UTR 15.0%
!!! TTTTTAATTGATTAAGTTCA+AGG - chr8_4:53163237-53163256 Msa1333120:CDS 15.0%
!!! TTTTTGTTATTTTCGATTTT+TGG - chr8_4:53163268-53163287 Msa1333120:CDS 15.0%
!! CTAAAACAAAAGATAAAATA+AGG - chr8_4:53163513-53163532 Msa1333120:CDS 15.0%
!! AGCATATTATATTAAATCAT+TGG - chr8_4:53164018-53164037 Msa1333120:CDS 15.0%
!! ATATCATTTAACATACAATT+TGG + chr8_4:53164089-53164108 None:intergenic 15.0%
!! AAATTGTATGTTAAATGATA+TGG - chr8_4:53164088-53164107 Msa1333120:CDS 15.0%
!! TACTATTAAAATAATACATG+GGG + chr8_4:53164210-53164229 None:intergenic 15.0%
!! CTATATGAGAAAAAATGAAT+AGG + chr8_4:53163169-53163188 None:intergenic 20.0%
!! AATTAAAAAATACTTGACAC+AGG + chr8_4:53163915-53163934 None:intergenic 20.0%
!!! TTACCTTGTTTTTCTTAAAT+AGG + chr8_4:53164412-53164431 None:intergenic 20.0%
!!! AATCTTGTAATTTTGACAAT+TGG - chr8_4:53165719-53165738 Msa1333120:five_prime_UTR 20.0%
!!! ATCTTGTAATTTTGACAATT+GGG - chr8_4:53165720-53165739 Msa1333120:five_prime_UTR 20.0%
!! GAAGATGAAAATAAATCATA+TGG + chr8_4:53165791-53165810 None:intergenic 20.0%
! AATATTTATGTCATTGGACT+TGG + chr8_4:53162710-53162729 None:intergenic 25.0%
! CCAAGAAATATTTATGTCAT+TGG + chr8_4:53162716-53162735 None:intergenic 25.0%
! CCAATGACATAAATATTTCT+TGG - chr8_4:53162713-53162732 Msa1333120:three_prime_UTR 25.0%
! TTCTCATATAGATATAGATG+TGG - chr8_4:53163178-53163197 Msa1333120:CDS 25.0%
!! TGTTTATATTTCTGTGTCTT+TGG - chr8_4:53163352-53163371 Msa1333120:CDS 25.0%
! ATTATTAGATTTAGCTGGAT+GGG - chr8_4:53163743-53163762 Msa1333120:CDS 25.0%
! AGAGAGTAAACATATTGTTA+TGG - chr8_4:53163961-53163980 Msa1333120:CDS 25.0%
! ACATTCAATTCGTTAATCAA+CGG + chr8_4:53163988-53164007 None:intergenic 25.0%
! AAGAAAATTGTATCATCAAC+AGG - chr8_4:53164581-53164600 Msa1333120:intron 25.0%
! AGAAAATTGTATCATCAACA+GGG - chr8_4:53164582-53164601 Msa1333120:intron 25.0%
! TGTGTGTTAAATTTAGATTC+AGG - chr8_4:53165585-53165604 Msa1333120:CDS 25.0%
! GAGATATATATTATTCAGCA+AGG + chr8_4:53165686-53165705 None:intergenic 25.0%
TAGAAGAAGAATCTTAACGA+TGG - chr8_4:53162859-53162878 Msa1333120:three_prime_UTR 30.0%
AGTAGAAAAGTGAATCGAAA+TGG + chr8_4:53163142-53163161 None:intergenic 30.0%
!! CTTTGATTTTGGATGAACAT+CGG - chr8_4:53163328-53163347 Msa1333120:CDS 30.0%
TTAAGCTGTTTATCCAAACA+GGG + chr8_4:53163447-53163466 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + chr8_4:53163448-53163467 None:intergenic 30.0%
ATGAATAGCGCTTATGTATA+AGG - chr8_4:53163485-53163504 Msa1333120:CDS 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr8_4:53163598-53163617 Msa1333120:CDS 30.0%
TCCAGCTAAATCTAATAATC+CGG + chr8_4:53163742-53163761 None:intergenic 30.0%
GATTATTAGATTTAGCTGGA+TGG - chr8_4:53163742-53163761 Msa1333120:CDS 30.0%
! TAACTTTTCGTAGAGTCATT+TGG - chr8_4:53163822-53163841 Msa1333120:CDS 30.0%
!!! CTCTTTTTTAAAGTCTACTC+TGG - chr8_4:53163856-53163875 Msa1333120:CDS 30.0%
CTAAACTTGTATTAACCTCT+TGG - chr8_4:53163886-53163905 Msa1333120:CDS 30.0%
ATGTTTACTCTCTAACATCT+GGG + chr8_4:53163954-53163973 None:intergenic 30.0%
TATGTTTACTCTCTAACATC+TGG + chr8_4:53163955-53163974 None:intergenic 30.0%
! ACTCTTGATTTTCTCACTTT+AGG - chr8_4:53164059-53164078 Msa1333120:CDS 30.0%
! CTCTTGATTTTCTCACTTTA+GGG - chr8_4:53164060-53164079 Msa1333120:CDS 30.0%
! TCTTGATTTTCTCACTTTAG+GGG - chr8_4:53164061-53164080 Msa1333120:CDS 30.0%
GTATGTTAAATGATATGGTC+TGG - chr8_4:53164093-53164112 Msa1333120:CDS 30.0%
! TAAATGATATGGTCTGGAAT+TGG - chr8_4:53164099-53164118 Msa1333120:CDS 30.0%
AGGCCTATTTAAGAAAAACA+AGG - chr8_4:53164406-53164425 Msa1333120:intron 30.0%
AACAAGGTAACATATGTCAA+AGG - chr8_4:53164422-53164441 Msa1333120:intron 30.0%
GTAACATATGTCAAAGGATA+CGG - chr8_4:53164428-53164447 Msa1333120:intron 30.0%
! AACAGTATTTTCACCTTCAA+CGG + chr8_4:53164489-53164508 None:intergenic 30.0%
! TAGAGATTTTACATCTGAAC+CGG + chr8_4:53164540-53164559 None:intergenic 30.0%
GAAAATTGTATCATCAACAG+GGG - chr8_4:53164583-53164602 Msa1333120:intron 30.0%
AAATTAAGTCCAGAAGTGAA+TGG + chr8_4:53164935-53164954 None:intergenic 30.0%
ATTCACTTCTGGACTTAATT+TGG - chr8_4:53164934-53164953 Msa1333120:intron 30.0%
TGTCAAGATAATTGCTGAAA+AGG - chr8_4:53165297-53165316 Msa1333120:intron 30.0%
AAAGGAGACAGACAAAATAT+TGG - chr8_4:53165315-53165334 Msa1333120:intron 30.0%
AAGGAGACAGACAAAATATT+GGG - chr8_4:53165316-53165335 Msa1333120:intron 30.0%
!! CTTGTTTTCATTTTTGTCCA+AGG - chr8_4:53165534-53165553 Msa1333120:CDS 30.0%
TAATATATATCTCTCCTCTC+AGG - chr8_4:53165693-53165712 Msa1333120:five_prime_UTR 30.0%
ATATGGATCACTCAAATTGT+TGG + chr8_4:53165774-53165793 None:intergenic 30.0%
AACTTAAACCAAGTGAACAA+AGG + chr8_4:53165813-53165832 None:intergenic 30.0%
AAGAATCTTAACGATGGCTA+TGG - chr8_4:53162865-53162884 Msa1333120:three_prime_UTR 35.0%
! ACCTTAGAGAGAAAGTGTAA+CGG + chr8_4:53162943-53162962 None:intergenic 35.0%
!!! CAAGTTAGTTTTTTCTGCTG+AGG - chr8_4:53163296-53163315 Msa1333120:CDS 35.0%
TCTTGATTTAATGCCCTGTT+TGG - chr8_4:53163431-53163450 Msa1333120:CDS 35.0%
ACCGGATTATTAGATTTAGC+TGG - chr8_4:53163738-53163757 Msa1333120:CDS 35.0%
AAAACCATATTCCACTAGGT+GGG + chr8_4:53164167-53164186 None:intergenic 35.0%
AACCAAAACCATATTCCACT+AGG + chr8_4:53164171-53164190 None:intergenic 35.0%
TTGTGTTGCCTTCATATTTC+AGG - chr8_4:53164238-53164257 Msa1333120:intron 35.0%
CAAATGAATGTTTAGCCTCA+TGG + chr8_4:53164289-53164308 None:intergenic 35.0%
AAACATTCATTTGCCAACCA+TGG - chr8_4:53164296-53164315 Msa1333120:intron 35.0%
AACATTCATTTGCCAACCAT+GGG - chr8_4:53164297-53164316 Msa1333120:intron 35.0%
AAAATTCCTTTCACCATCTG+AGG - chr8_4:53164451-53164470 Msa1333120:intron 35.0%
GGTGAAAATACTGTTGTGAA+AGG - chr8_4:53164494-53164513 Msa1333120:intron 35.0%
AAGCATATCATTATAGCCAC+CGG - chr8_4:53164518-53164537 Msa1333120:intron 35.0%
TCAGATGTAAAATCTCTACC+TGG - chr8_4:53164542-53164561 Msa1333120:intron 35.0%
CAATAACTACAAGCTTCTTG+GGG + chr8_4:53164628-53164647 None:intergenic 35.0%
CCAATAACTACAAGCTTCTT+GGG + chr8_4:53164629-53164648 None:intergenic 35.0%
CCAAGAAGCTTGTAGTTATT+GGG - chr8_4:53164627-53164646 Msa1333120:intron 35.0%
CAAGAAGCTTGTAGTTATTG+GGG - chr8_4:53164628-53164647 Msa1333120:intron 35.0%
GAAATTCAAGCTGAATACCA+AGG - chr8_4:53164796-53164815 Msa1333120:intron 35.0%
GACAACATCTGCTTCAATTA+TGG + chr8_4:53164891-53164910 None:intergenic 35.0%
! GGACTTAATTTGGACAAGAT+AGG - chr8_4:53164944-53164963 Msa1333120:intron 35.0%
!! GACGCATTTTGGTAAATGAA+AGG - chr8_4:53164987-53165006 Msa1333120:intron 35.0%
! AAGGTTTTCCACAAATGTCT+CGG - chr8_4:53165006-53165025 Msa1333120:intron 35.0%
AGGAGACAGACAAAATATTG+GGG - chr8_4:53165317-53165336 Msa1333120:intron 35.0%
! AATATTGGGGGTGCATATTA+TGG - chr8_4:53165330-53165349 Msa1333120:intron 35.0%
CAAGAGAATAAAGAAGCAAC+AGG + chr8_4:53165518-53165537 None:intergenic 35.0%
TTCATCTTCCTTTGTTCACT+TGG - chr8_4:53165802-53165821 Msa1333120:five_prime_UTR 35.0%
AAAGGCTGAATTTGCATTGC+AGG - chr8_4:53162614-53162633 Msa1333120:three_prime_UTR 40.0%
TGAATTTGCATTGCAGGTGA+GGG - chr8_4:53162620-53162639 Msa1333120:three_prime_UTR 40.0%
TCCGTTACACTTTCTCTCTA+AGG - chr8_4:53162939-53162958 Msa1333120:three_prime_UTR 40.0%
!! ACTTTCTCTCTAAGGTCAAG+AGG - chr8_4:53162947-53162966 Msa1333120:three_prime_UTR 40.0%
ATCGAAATGGAACCTTGGAA+GGG + chr8_4:53163129-53163148 None:intergenic 40.0%
AATCGAAATGGAACCTTGGA+AGG + chr8_4:53163130-53163149 None:intergenic 40.0%
AGTGAATCGAAATGGAACCT+TGG + chr8_4:53163134-53163153 None:intergenic 40.0%
!!! GTTAGTTTTTTCTGCTGAGG+TGG - chr8_4:53163299-53163318 Msa1333120:CDS 40.0%
!!! GGTGGAGAGTACTTTGATTT+TGG - chr8_4:53163317-53163336 Msa1333120:CDS 40.0%
!! GCTGTTTTCTTAAGCTGTCA+TGG - chr8_4:53163563-53163582 Msa1333120:CDS 40.0%
AAGCTGTCATGGAGAACTTA+TGG - chr8_4:53163574-53163593 Msa1333120:CDS 40.0%
AAACACTTGCGAGACTGTTT+GGG + chr8_4:53163653-53163672 None:intergenic 40.0%
AAAACACTTGCGAGACTGTT+TGG + chr8_4:53163654-53163673 None:intergenic 40.0%
AAACCATATTCCACTAGGTG+GGG + chr8_4:53164166-53164185 None:intergenic 40.0%
CAAAACCATATTCCACTAGG+TGG + chr8_4:53164168-53164187 None:intergenic 40.0%
! CACCTAGTGGAATATGGTTT+TGG - chr8_4:53164166-53164185 Msa1333120:CDS 40.0%
!! CAAAAGCGCCTGAAATATGA+AGG + chr8_4:53164249-53164268 None:intergenic 40.0%
TTTAGCCTCATGGTACATGT+GGG + chr8_4:53164279-53164298 None:intergenic 40.0%
ACATTCATTTGCCAACCATG+GGG - chr8_4:53164298-53164317 Msa1333120:intron 40.0%
! CATTTGAAACTTTGACCCCA+TGG + chr8_4:53164316-53164335 None:intergenic 40.0%
TGGGGTCAAAGTTTCAAATG+TGG - chr8_4:53164316-53164335 Msa1333120:intron 40.0%
! TTTGTCTTTTTGCGCCATCA+TGG + chr8_4:53164357-53164376 None:intergenic 40.0%
!! AAGCTGTTTCTAATCTGACC+CGG - chr8_4:53164375-53164394 Msa1333120:intron 40.0%
TAAATAGGCCTTCAATACCC+CGG + chr8_4:53164397-53164416 None:intergenic 40.0%
! AGATTTTACATCTGAACCGG+TGG + chr8_4:53164537-53164556 None:intergenic 40.0%
! TTTTCATCAATAGTGACGCC+AGG + chr8_4:53164563-53164582 None:intergenic 40.0%
CCCAAGAAGCTTGTAGTTAT+TGG - chr8_4:53164626-53164645 Msa1333120:intron 40.0%
CCCAATAACTACAAGCTTCT+TGG + chr8_4:53164630-53164649 None:intergenic 40.0%
TTATTGGGGCAGGTTACATT+GGG - chr8_4:53164642-53164661 Msa1333120:intron 40.0%
ATCGCAGATTGTTCCATCTA+TGG - chr8_4:53164724-53164743 Msa1333120:intron 40.0%
CAGATTGTTCCATCTATGGA+TGG - chr8_4:53164728-53164747 Msa1333120:intron 40.0%
CATCTATGGATGGAGAAATC+CGG - chr8_4:53164738-53164757 Msa1333120:intron 40.0%
ATTCAAGCTGAATACCAAGG+TGG - chr8_4:53164799-53164818 Msa1333120:intron 40.0%
!! TGGTTGGAGTTGATACTTCT+GGG - chr8_4:53164819-53164838 Msa1333120:intron 40.0%
GATAGGAGTTGAAACTGACA+AGG - chr8_4:53164961-53164980 Msa1333120:intron 40.0%
! AGGTTTTCCACAAATGTCTC+GGG - chr8_4:53165007-53165026 Msa1333120:intron 40.0%
!! GCAATTGGTGATGTAATTCC+CGG - chr8_4:53165037-53165056 Msa1333120:intron 40.0%
TGTTGAGTACTTAGCTGGTA+AGG - chr8_4:53165102-53165121 Msa1333120:intron 40.0%
AGTACTTAGCTGGTAAGGTT+GGG - chr8_4:53165107-53165126 Msa1333120:intron 40.0%
! TGTGGACTATGACAAAGTAC+CGG - chr8_4:53165132-53165151 Msa1333120:intron 40.0%
!! AAGGCAATTGATAACGCTGA+AGG - chr8_4:53165271-53165290 Msa1333120:intron 40.0%
GGAGACAGACAAAATATTGG+GGG - chr8_4:53165318-53165337 Msa1333120:intron 40.0%
TGAATGAGTTCTCCTGCATT+GGG + chr8_4:53165358-53165377 None:intergenic 40.0%
ATGAATGAGTTCTCCTGCAT+TGG + chr8_4:53165359-53165378 None:intergenic 40.0%
TGCATCATACTGCAATGCAA+TGG + chr8_4:53165389-53165408 None:intergenic 40.0%
TTAACAGCCTCACTCATTGT+TGG + chr8_4:53165448-53165467 None:intergenic 40.0%
!! GTGAATTGGCTTGTCATAAG+TGG + chr8_4:53165485-53165504 None:intergenic 40.0%
CAGGCTCTTCAAATGTGAAT+TGG + chr8_4:53165499-53165518 None:intergenic 40.0%
CGAAGTCAAGGTAAAATCCT+TGG + chr8_4:53165554-53165573 None:intergenic 40.0%
AACGTATCTTCTCGAAGTCA+AGG + chr8_4:53165566-53165585 None:intergenic 40.0%
ATTACAAGATTGCTCCTGAG+AGG + chr8_4:53165710-53165729 None:intergenic 40.0%
! AAATTGTTGGTCAGAAGCGT+GGG + chr8_4:53165761-53165780 None:intergenic 40.0%
CTGAATTTGCATTGCAGGTG+AGG - chr8_4:53162619-53162638 Msa1333120:three_prime_UTR 45.0%
CTTTGTGGAGGGCCATTATT+GGG + chr8_4:53162680-53162699 None:intergenic 45.0%
TTGGATGATGCCTTTGTGGA+GGG + chr8_4:53162691-53162710 None:intergenic 45.0%
!! GACGTCGTTTTCATCAGATC+CGG + chr8_4:53162981-53163000 None:intergenic 45.0%
GAAAACGACGTCGTCATCAT+CGG - chr8_4:53162989-53163008 Msa1333120:CDS 45.0%
! AAGCTGAGCAGCTTTAATGG+CGG + chr8_4:53163038-53163057 None:intergenic 45.0%
! ACCAAGCTGAGCAGCTTTAA+TGG + chr8_4:53163041-53163060 None:intergenic 45.0%
GACAAGCGCTTAGACATGAA+GGG + chr8_4:53163715-53163734 None:intergenic 45.0%
AGACAAGCGCTTAGACATGA+AGG + chr8_4:53163716-53163735 None:intergenic 45.0%
GTCTAAGCGCTTGTCTTAAC+CGG - chr8_4:53163720-53163739 Msa1333120:CDS 45.0%
ACTTGACACAGGAAACCAAG+AGG + chr8_4:53163904-53163923 None:intergenic 45.0%
TTCTTCCCACATGTACCATG+AGG - chr8_4:53164271-53164290 Msa1333120:intron 45.0%
GTTTAGCCTCATGGTACATG+TGG + chr8_4:53164280-53164299 None:intergenic 45.0%
TGAAACTTTGACCCCATGGT+TGG + chr8_4:53164312-53164331 None:intergenic 45.0%
! GATTGACTTAGCTGCCATGA+TGG - chr8_4:53164340-53164359 Msa1333120:intron 45.0%
!! AGCTGTTTCTAATCTGACCC+GGG - chr8_4:53164376-53164395 Msa1333120:intron 45.0%
AAATAGGCCTTCAATACCCC+GGG + chr8_4:53164396-53164415 None:intergenic 45.0%
AAGCTTGTAGTTATTGGGGC+AGG - chr8_4:53164632-53164651 Msa1333120:intron 45.0%
GTTATTGGGGCAGGTTACAT+TGG - chr8_4:53164641-53164660 Msa1333120:intron 45.0%
! AGGTTACATTGGGCTAGAGA+TGG - chr8_4:53164652-53164671 Msa1333120:intron 45.0%
! GGTTACATTGGGCTAGAGAT+GGG - chr8_4:53164653-53164672 Msa1333120:intron 45.0%
CGGATTTCTCCATCCATAGA+TGG + chr8_4:53164740-53164759 None:intergenic 45.0%
CAGCGTTCTCTTGAAAAGCA+AGG - chr8_4:53164770-53164789 Msa1333120:intron 45.0%
AAGCTGAATACCAAGGTGGT+TGG - chr8_4:53164803-53164822 Msa1333120:intron 45.0%
AGTATCAACTCCAACCACCT+TGG + chr8_4:53164816-53164835 None:intergenic 45.0%
!! GTGGTTGGAGTTGATACTTC+TGG - chr8_4:53164818-53164837 Msa1333120:intron 45.0%
!! GGTTGGAGTTGATACTTCTG+GGG - chr8_4:53164820-53164839 Msa1333120:intron 45.0%
GATGTTGTCCTTGTATCTGC+TGG - chr8_4:53164902-53164921 Msa1333120:intron 45.0%
TTGTCCTTGTATCTGCTGGT+AGG - chr8_4:53164906-53164925 Msa1333120:intron 45.0%
GGAGTTGAAACTGACAAGGT+AGG - chr8_4:53164965-53164984 Msa1333120:intron 45.0%
! TGACAAGGTAGGACGCATTT+TGG - chr8_4:53164976-53164995 Msa1333120:intron 45.0%
ATAGACACCCGAGACATTTG+TGG + chr8_4:53165017-53165036 None:intergenic 45.0%
TGTAATTCCCGGTCCAATGT+TGG - chr8_4:53165048-53165067 Msa1333120:intron 45.0%
GCTTGTGTTGAGTACTTAGC+TGG - chr8_4:53165097-53165116 Msa1333120:intron 45.0%
GAGTACTTAGCTGGTAAGGT+TGG - chr8_4:53165106-53165125 Msa1333120:intron 45.0%
! GTGGACTATGACAAAGTACC+GGG - chr8_4:53165133-53165152 Msa1333120:intron 45.0%
GGGTTTGTATAGACAACACC+CGG + chr8_4:53165154-53165173 None:intergenic 45.0%
TGTTGTCTATACAAACCCCG+AGG - chr8_4:53165156-53165175 Msa1333120:intron 45.0%
ACTGGAGTTCAATACCGTGT+TGG - chr8_4:53165217-53165236 Msa1333120:intron 45.0%
CTGGAGTTCAATACCGTGTT+GGG - chr8_4:53165218-53165237 Msa1333120:intron 45.0%
TGAAAGGGAACTTCCCAACA+CGG + chr8_4:53165234-53165253 None:intergenic 45.0%
TGTTGGGAAGTTCCCTTTCA+TGG - chr8_4:53165234-53165253 Msa1333120:intron 45.0%
CATATTATGGCACCCAATGC+AGG - chr8_4:53165343-53165362 Msa1333120:intron 45.0%
GCAGTATGATGCATCAAGTG+AGG - chr8_4:53165396-53165415 Msa1333120:CDS 45.0%
TGCACATCCAACAATGAGTG+AGG - chr8_4:53165438-53165457 Msa1333120:CDS 45.0%
CTTGTCATAAGTGGCCATTG+CGG + chr8_4:53165476-53165495 None:intergenic 45.0%
CAAATTGTTGGTCAGAAGCG+TGG + chr8_4:53165762-53165781 None:intergenic 45.0%
!! TTATAAATATTAAAGAAAAT+AGG - chr8_4:53162772-53162791 Msa1333120:three_prime_UTR 5.0%
CCTTTGTGGAGGGCCATTAT+TGG + chr8_4:53162681-53162700 None:intergenic 50.0%
CCAATAATGGCCCTCCACAA+AGG - chr8_4:53162678-53162697 Msa1333120:three_prime_UTR 50.0%
CTTGGATGATGCCTTTGTGG+AGG + chr8_4:53162692-53162711 None:intergenic 50.0%
GGACTTGGATGATGCCTTTG+TGG + chr8_4:53162695-53162714 None:intergenic 50.0%
GCTGTGTGTGTGTGTGTGTT+AGG - chr8_4:53162799-53162818 Msa1333120:three_prime_UTR 50.0%
AACGATGGCTATGGCGAACT+TGG - chr8_4:53162874-53162893 Msa1333120:three_prime_UTR 50.0%
GGGTTCCGCTCTTCTTTCAT+CGG - chr8_4:53162907-53162926 Msa1333120:three_prime_UTR 50.0%
TTCCGCTCTTCTTTCATCGG+CGG - chr8_4:53162910-53162929 Msa1333120:three_prime_UTR 50.0%
AGGTCAAGAGGTTTCGCTTC+CGG - chr8_4:53162959-53162978 Msa1333120:exon 50.0%
GCCATTAAAGCTGCTCAGCT+TGG - chr8_4:53163037-53163056 Msa1333120:CDS 50.0%
ACCACTTGCATCGAAAAGCG+TGG - chr8_4:53163067-53163086 Msa1333120:CDS 50.0%
! ACCACGCTTTTCGATGCAAG+TGG + chr8_4:53163071-53163090 None:intergenic 50.0%
! ATCGAAAAGCGTGGTGCTCT+TGG - chr8_4:53163076-53163095 Msa1333120:CDS 50.0%
GATGCAACCAACGTTGAGAC+AGG + chr8_4:53163107-53163126 None:intergenic 50.0%
CACTAGGTGGGGTGACTATA+TGG + chr8_4:53164155-53164174 None:intergenic 50.0%
CATATAGTCACCCCACCTAG+TGG - chr8_4:53164153-53164172 Msa1333120:CDS 50.0%
TCACCCCACCTAGTGGAATA+TGG - chr8_4:53164160-53164179 Msa1333120:CDS 50.0%
!! GCTGTTTCTAATCTGACCCG+GGG - chr8_4:53164377-53164396 Msa1333120:intron 50.0%
!! AATCTGACCCGGGGTATTGA+AGG - chr8_4:53164386-53164405 Msa1333120:intron 50.0%
CAGAGACCTCAGATGGTGAA+AGG + chr8_4:53164460-53164479 None:intergenic 50.0%
GTGTCTACAGAGACCTCAGA+TGG + chr8_4:53164467-53164486 None:intergenic 50.0%
GTCTCTGTAGACACCGTTGA+AGG - chr8_4:53164473-53164492 Msa1333120:intron 50.0%
! GCTAGAGATGGGCTCTGTAT+GGG - chr8_4:53164664-53164683 Msa1333120:intron 50.0%
! CTAGAGATGGGCTCTGTATG+GGG - chr8_4:53164665-53164684 Msa1333120:intron 50.0%
GAGAACGCTGAAACTGCTTC+CGG + chr8_4:53164760-53164779 None:intergenic 50.0%
!! GGAGTTGATACTTCTGGGGA+TGG - chr8_4:53164824-53164843 Msa1333120:intron 50.0%
CTAACTGTTGAACCAGCAGC+TGG - chr8_4:53164854-53164873 Msa1333120:intron 50.0%
GAGTCCTACCAGCAGATACA+AGG + chr8_4:53164913-53164932 None:intergenic 50.0%
GGTAGGACTCCATTCACTTC+TGG - chr8_4:53164923-53164942 Msa1333120:intron 50.0%
GTCTCGGGTGTCTATGCAAT+TGG - chr8_4:53165022-53165041 Msa1333120:intron 50.0%
TTGTGTGCCAACATTGGACC+GGG + chr8_4:53165058-53165077 None:intergenic 50.0%
CTTGTGTGCCAACATTGGAC+CGG + chr8_4:53165059-53165078 None:intergenic 50.0%
TCTGCCTTGTGTGCCAACAT+TGG + chr8_4:53165064-53165083 None:intergenic 50.0%
GCACACAAGGCAGAAGAAGA+TGG - chr8_4:53165070-53165089 Msa1333120:intron 50.0%
TTCCCTACAGAAGCAACCTC+GGG + chr8_4:53165175-53165194 None:intergenic 50.0%
CTTCCCTACAGAAGCAACCT+CGG + chr8_4:53165176-53165195 None:intergenic 50.0%
TGCTTCTGTAGGGAAGACAG+AGG - chr8_4:53165180-53165199 Msa1333120:intron 50.0%
GAAGACAGAGGAGCAGGTTA+AGG - chr8_4:53165192-53165211 Msa1333120:intron 50.0%
GAGGAGCAGGTTAAGGAAAC+TGG - chr8_4:53165199-53165218 Msa1333120:intron 50.0%
TCCCTTTCATGGCCAATAGC+AGG - chr8_4:53165245-53165264 Msa1333120:intron 50.0%
CCCTGCTATTGGCCATGAAA+GGG + chr8_4:53165249-53165268 None:intergenic 50.0%
CCCTTTCATGGCCAATAGCA+GGG - chr8_4:53165246-53165265 Msa1333120:intron 50.0%
AATTGCCTTCGCCCTGCTAT+TGG + chr8_4:53165260-53165279 None:intergenic 50.0%
GGCTGTTAAAGAAGCCGCAA+TGG - chr8_4:53165459-53165478 Msa1333120:CDS 50.0%
! CTATGGCGAACTTGGCTCGT+AGG - chr8_4:53162882-53162901 Msa1333120:three_prime_UTR 55.0%
! GCGAACTTGGCTCGTAGGAA+GGG - chr8_4:53162887-53162906 Msa1333120:three_prime_UTR 55.0%
CTCCGCCGATGAAAGAAGAG+CGG + chr8_4:53162915-53162934 None:intergenic 55.0%
AACGACGTCGTCATCATCGG+TGG - chr8_4:53162992-53163011 Msa1333120:CDS 55.0%
! GAAAAGCGTGGTGCTCTTGG+TGG - chr8_4:53163079-53163098 Msa1333120:CDS 55.0%
GGTGGTACCTGTCTCAACGT+TGG - chr8_4:53163097-53163116 Msa1333120:CDS 55.0%
! CGTTGGTTGCATCCCTTCCA+AGG - chr8_4:53163114-53163133 Msa1333120:CDS 55.0%
! GGCTAGAGATGGGCTCTGTA+TGG - chr8_4:53164663-53164682 Msa1333120:intron 55.0%
GGCTCTGTATGGGGACGAAT+TGG - chr8_4:53164674-53164693 Msa1333120:intron 55.0%
!! ATGGGGACGAATTGGCTCTG+AGG - chr8_4:53164682-53164701 Msa1333120:intron 55.0%
ACTGTTGAACCAGCAGCTGG+TGG - chr8_4:53164857-53164876 Msa1333120:intron 55.0%
CGGTCCAATGTTGGCACACA+AGG - chr8_4:53165057-53165076 Msa1333120:intron 55.0%
AGCTGGTAAGGTTGGGCATG+TGG - chr8_4:53165114-53165133 Msa1333120:intron 55.0%
AACCCCGAGGTTGCTTCTGT+AGG - chr8_4:53165169-53165188 Msa1333120:intron 55.0%
ACCCCGAGGTTGCTTCTGTA+GGG - chr8_4:53165170-53165189 Msa1333120:intron 55.0%
TCCCTACAGAAGCAACCTCG+GGG + chr8_4:53165174-53165193 None:intergenic 55.0%
TGTAGGGAAGACAGAGGAGC+AGG - chr8_4:53165186-53165205 Msa1333120:intron 55.0%
GCCCTGCTATTGGCCATGAA+AGG + chr8_4:53165250-53165269 None:intergenic 55.0%
! GGCGAACTTGGCTCGTAGGA+AGG - chr8_4:53162886-53162905 Msa1333120:three_prime_UTR 60.0%
GACGTCGTCATCATCGGTGG+TGG - chr8_4:53162995-53163014 Msa1333120:CDS 60.0%
! GTCATCATCGGTGGTGGTCC+CGG - chr8_4:53163001-53163020 Msa1333120:CDS 60.0%
GTCTGTTCACCACCAGCTGC+TGG + chr8_4:53164869-53164888 None:intergenic 60.0%
CATGGCCAATAGCAGGGCGA+AGG - chr8_4:53165252-53165271 Msa1333120:intron 60.0%
! ATCATCGGTGGTGGTCCCGG+CGG - chr8_4:53163004-53163023 Msa1333120:CDS 65.0%
AATGGCGGCGACGTAACCGC+CGG + chr8_4:53163023-53163042 None:intergenic 65.0%
ATGGCGGCGACGTAACCGCC+GGG + chr8_4:53163022-53163041 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53162601 53165886 53162601 ID=Msa1333120;Name=Msa1333120
chr8_4 mRNA 53162601 53165886 53162601 ID=Msa1333120-mRNA-1;Parent=Msa1333120;Name=Msa1333120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=277|1|1|1|1|1|2|376|502
chr8_4 exon 53162601 53164227 53162601 ID=Msa1333120-mRNA-1:exon:16216;Parent=Msa1333120-mRNA-1
chr8_4 exon 53165352 53165886 53165352 ID=Msa1333120-mRNA-1:exon:16215;Parent=Msa1333120-mRNA-1
chr8_4 five_prime_UTR 53165610 53165886 53165610 ID=Msa1333120-mRNA-1:five_prime_utr;Parent=Msa1333120-mRNA-1
chr8_4 CDS 53165352 53165609 53165352 ID=Msa1333120-mRNA-1:cds;Parent=Msa1333120-mRNA-1
chr8_4 CDS 53162977 53164227 53162977 ID=Msa1333120-mRNA-1:cds;Parent=Msa1333120-mRNA-1
chr8_4 three_prime_UTR 53162601 53162976 53162601 ID=Msa1333120-mRNA-1:three_prime_utr;Parent=Msa1333120-mRNA-1
Gene Sequence

>Msa1333120

ATGGCTATGGCGAACTTGGCTCGTAGGAAGGGTTCCGCTCTTCTTTCATCGGCGGAGACTCTCCGTTACACTTTCTCTCTAAGGTCAAGAGGTTTCGCTTCCGGATCTGATGAAAACGACGTCGTCATCATCGGTGGTGGTCCCGGCGGTTACGTCGCCGCCATTAAAGCTGCTCAGCTTGGTTTCAAAACCACTTGCATCGAAAAGCGTGGTGCTCTTGGTGGTACCTGTCTCAACGTTGGTTGCATCCCTTCCAAGGCGCTTTTGCATTCTTCCCACATGTACCATGAGGCTAAACATTCATTTGCCAACCATGGGGTCAAAGTTTCAAATGTGGAGATTGACTTAGCTGCCATGATGGCGCAAAAAGACAAAGCTGTTTCTAATCTGACCCGGGGTATTGAAGGCCTATTTAAGAAAAACAAGGTAACATATGTCAAAGGATACGGAAAATTCCTTTCACCATCTGAGGTCTCTGTAGACACCGTTGAAGGTGAAAATACTGTTGTGAAAGGAAAGCATATCATTATAGCCACCGGTTCAGATGTAAAATCTCTACCTGGCGTCACTATTGATGAAAAGAAAATTGTATCATCAACAGGGGCTCTCGCATTGACTGAAATCCCCAAGAAGCTTGTAGTTATTGGGGCAGGTTACATTGGGCTAGAGATGGGCTCTGTATGGGGACGAATTGGCTCTGAGGTAACTGTTGTTGAGTTTGCATCGCAGATTGTTCCATCTATGGATGGAGAAATCCGGAAGCAGTTTCAGCGTTCTCTTGAAAAGCAAGGCATGAAATTCAAGCTGAATACCAAGGTGGTTGGAGTTGATACTTCTGGGGATGGTGTGAAGCTAACTGTTGAACCAGCAGCTGGTGGTGAACAGACCATAATTGAAGCAGATGTTGTCCTTGTATCTGCTGGTAGGACTCCATTCACTTCTGGACTTAATTTGGACAAGATAGGAGTTGAAACTGACAAGGTAGGACGCATTTTGGTAAATGAAAGGTTTTCCACAAATGTCTCGGGTGTCTATGCAATTGGTGATGTAATTCCCGGTCCAATGTTGGCACACAAGGCAGAAGAAGATGGAGTTGCTTGTGTTGAGTACTTAGCTGGTAAGGTTGGGCATGTGGACTATGACAAAGTACCGGGTGTTGTCTATACAAACCCCGAGGTTGCTTCTGTAGGGAAGACAGAGGAGCAGGTTAAGGAAACTGGAGTTCAATACCGTGTTGGGAAGTTCCCTTTCATGGCCAATAGCAGGGCGAAGGCAATTGATAACGCTGAAGGACTTGTCAAGATAATTGCTGAAAAGGAGACAGACAAAATATTGGGGGTGCATATTATGGCACCCAATGCAGGAGAACTCATTCATGAAGCAGCCATTGCATTGCAGTATGATGCATCAAGTGAGGACATAGCACGTGTTTGTCATGCACATCCAACAATGAGTGAGGCTGTTAAAGAAGCCGCAATGGCCACTTATGACAAGCCAATTCACATTTGA
Protein sequence

>Msa1333120

MAMANLARRKGSALLSSAETLRYTFSLRSRGFASGSDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFLSPSEVSVDTVEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALTEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASQIVPSMDGEIRKQFQRSLEKQGMKFKLNTKVVGVDTSGDGVKLTVEPAAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKVGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVQYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAVKEAAMATYDKPIHI*