AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204260 MtrunA17_Chr4g0068951 99.402 502 3 0 1 502 1 502 0.0 1014
Msa1204260 MtrunA17_Chr2g0294661 35.685 482 287 11 26 490 72 547 1.86e-75 248
Msa1204260 MtrunA17_Chr4g0068201 35.189 503 295 11 5 490 56 544 2.56e-75 247
Msa1204260 MtrunA17_Chr6g0462411 31.049 467 286 10 40 486 26 476 1.26e-60 207
Msa1204260 MtrunA17_Chr1g0184771 27.755 490 321 11 15 486 47 521 2.76e-48 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204260 AT1G48030.2 85.630 508 66 4 1 502 1 507 0.0 871
Msa1204260 AT1G48030.5 85.630 508 66 4 1 502 1 507 0.0 871
Msa1204260 AT1G48030.3 85.630 508 66 4 1 502 1 507 0.0 871
Msa1204260 AT1G48030.1 85.630 508 66 4 1 502 1 507 0.0 871
Msa1204260 AT1G48030.4 85.630 508 66 4 1 502 1 507 0.0 871
Msa1204260 AT3G17240.1 85.433 508 67 3 1 502 1 507 0.0 871
Msa1204260 AT3G17240.3 85.433 508 67 3 1 502 1 507 0.0 871
Msa1204260 AT4G16155.1 35.421 463 254 12 55 490 101 545 2.35e-72 240
Msa1204260 AT3G16950.1 34.773 463 258 11 55 490 103 548 2.89e-72 240
Msa1204260 AT3G16950.2 34.773 463 258 11 55 490 103 548 8.37e-72 240
Msa1204260 AT3G24170.1 30.108 465 293 13 40 486 27 477 2.87e-53 187
Msa1204260 AT3G24170.2 30.108 465 293 13 40 486 27 477 2.87e-53 187
Msa1204260 AT3G24170.3 30.108 465 293 13 40 486 27 477 2.87e-53 187
Msa1204260 AT3G54660.1 27.200 500 324 11 9 486 53 534 1.63e-42 159
Msa1204260 AT3G17240.2 73.196 97 19 3 1 91 1 96 3.23e-32 120

Find 186 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACTTCTGGACTTAATT+TGG 0.142487 8_1:-59777732 Msa1204260:CDS
CCCAAGAAGCTTGTAGTTAT+TGG 0.185023 8_1:-59778040 Msa1204260:CDS
CCAATGACATAAATATTTCT+TGG 0.253869 8_1:-59779926 Msa1204260:five_prime_UTR
CCCAATAACTACAAGCTTCT+TGG 0.257682 8_1:+59778039 None:intergenic
GTGGTTGGAGTTGATACTTC+TGG 0.261463 8_1:-59777848 Msa1204260:CDS
CCAAGAAGCTTGTAGTTATT+GGG 0.265755 8_1:-59778039 Msa1204260:CDS
CCTTTGTGGAGGGCCATTAT+TGG 0.278288 8_1:+59779961 None:intergenic
TGACAAGGTAGGACGCATTT+TGG 0.289967 8_1:-59777690 Msa1204260:CDS
ACCAAGCTGAGCAGCTTTAA+TGG 0.289980 8_1:+59779599 None:intergenic
CCAAGAAATATTTATGTCAT+TGG 0.309619 8_1:+59779926 None:intergenic
GGTAGGACTCCATTCACTTC+TGG 0.310454 8_1:-59777743 Msa1204260:CDS
TTCATCTTCCTTTGTTCACT+TGG 0.317699 8_1:-59776864 Msa1204260:three_prime_UTR
GACAACATCTGCTTCAATTA+TGG 0.320224 8_1:+59777778 None:intergenic
TTATAAATATTAAAGAAAAT+AGG 0.320426 8_1:-59779867 Msa1204260:five_prime_UTR
AAAGGCTGAATTTGCATTGC+AGG 0.320989 8_1:-59780025 Msa1204260:five_prime_UTR
AAGAAAATTGTATCATCAAC+AGG 0.323435 8_1:-59778085 Msa1204260:CDS
TGTGTGTTAAATTTAGATTC+AGG 0.327781 8_1:-59777081 Msa1204260:three_prime_UTR
CTTTGTGGAGGGCCATTATT+GGG 0.328504 8_1:+59779962 None:intergenic
AGGTCAAGAGGTTTCGCTTC+CGG 0.337458 8_1:-59779678 Msa1204260:CDS
AAGGAGACAGACAAAATATT+GGG 0.348798 8_1:-59777350 Msa1204260:CDS
TGTTGGGAAGTTCCCTTTCA+TGG 0.353483 8_1:-59777432 Msa1204260:CDS
GAGGAGCAGGTTAAGGAAAC+TGG 0.355744 8_1:-59777467 Msa1204260:CDS
CAGGCTCTTCAAATGTGAAT+TGG 0.356810 8_1:+59777170 None:intergenic
AAAGGAGACAGACAAAATAT+TGG 0.357543 8_1:-59777351 Msa1204260:CDS
AATTGCCTTCGCCCTGCTAT+TGG 0.359778 8_1:+59777409 None:intergenic
CCAATAACTACAAGCTTCTT+GGG 0.362478 8_1:+59778040 None:intergenic
TTAACAGCCTCACTCATTGT+TGG 0.377486 8_1:+59777221 None:intergenic
GCAATTGGTGATGTAATTCC+CGG 0.389033 8_1:-59777629 Msa1204260:CDS
ATGAATGAGTTCTCCTGCAT+TGG 0.396625 8_1:+59777310 None:intergenic
GGCTAGAGATGGGCTCTGTA+TGG 0.404513 8_1:-59778003 Msa1204260:CDS
TCCCTTTCATGGCCAATAGC+AGG 0.405072 8_1:-59777421 Msa1204260:CDS
TGTCAAGATAATTGCTGAAA+AGG 0.408222 8_1:-59777369 Msa1204260:CDS
GAAGATGAAAATAAATCATA+TGG 0.409180 8_1:+59776878 None:intergenic
GGCTCTGTATGGGGACGAAT+TGG 0.414655 8_1:-59777992 Msa1204260:CDS
TGGTTGGAGTTGATACTTCT+GGG 0.417457 8_1:-59777847 Msa1204260:CDS
CGAAGTCAAGGTAAAATCCT+TGG 0.419162 8_1:+59777115 None:intergenic
AATATTTATGTCATTGGACT+TGG 0.421046 8_1:+59779932 None:intergenic
TCCGTTACACTTTCTCTCTA+AGG 0.422319 8_1:-59779698 Msa1204260:CDS
GGACTTAATTTGGACAAGAT+AGG 0.423938 8_1:-59777722 Msa1204260:CDS
GAAGACAGAGGAGCAGGTTA+AGG 0.424716 8_1:-59777474 Msa1204260:CDS
GCTAGAGATGGGCTCTGTAT+GGG 0.427257 8_1:-59778002 Msa1204260:CDS
GGACTTGGATGATGCCTTTG+TGG 0.427326 8_1:+59779947 None:intergenic
GTCATCATCGGTGGTGGTCC+CGG 0.435774 8_1:-59779636 Msa1204260:CDS
TGTTGAGTACTTAGCTGGTA+AGG 0.436084 8_1:-59777564 Msa1204260:CDS
GCCATTAAAGCTGCTCAGCT+TGG 0.436823 8_1:-59779600 Msa1204260:CDS
GTTATTGGGGCAGGTTACAT+TGG 0.436835 8_1:-59778025 Msa1204260:CDS
CTGGAGTTCAATACCGTGTT+GGG 0.438229 8_1:-59777448 Msa1204260:CDS
AACGATGGCTATGGCGAACT+TGG 0.445916 8_1:-59779763 Msa1204260:exon
GAGAACGCTGAAACTGCTTC+CGG 0.449447 8_1:+59777909 None:intergenic
AACATTCATTTGCCAACCAT+GGG 0.450908 8_1:-59778369 Msa1204260:CDS
CTTCCGGATTTCTCCATCCA+TGG 0.451603 8_1:+59777925 None:intergenic
AATCGAAATGGAACCTTGGA+AGG 0.456741 8_1:+59779510 None:intergenic
GTCTGTTCACCACCAGCTGC+TGG 0.459349 8_1:+59777800 None:intergenic
AATCTGACCCGGGGTATTGA+AGG 0.459866 8_1:-59778280 Msa1204260:CDS
CAAGAGAATAAAGAAGCAAC+AGG 0.460671 8_1:+59777151 None:intergenic
TCTGCCTTGTGTGCCAACAT+TGG 0.464020 8_1:+59777605 None:intergenic
AGTACTTAGCTGGTAAGGTT+GGG 0.465511 8_1:-59777559 Msa1204260:CDS
GCTTGTGTTGAGTACTTAGC+TGG 0.469925 8_1:-59777569 Msa1204260:CDS
ATATGGATCACTCAAATTGT+TGG 0.470792 8_1:+59776895 None:intergenic
TTATTGGGGCAGGTTACATT+GGG 0.471150 8_1:-59778024 Msa1204260:CDS
CGTTGGTTGCATCCCTTCCA+AGG 0.471575 8_1:-59779523 Msa1204260:intron
CATATTATGGCACCCAATGC+AGG 0.471769 8_1:-59777323 Msa1204260:CDS
TTCCCTACAGAAGCAACCTC+GGG 0.473270 8_1:+59777494 None:intergenic
CTGAATTTGCATTGCAGGTG+AGG 0.473656 8_1:-59780020 Msa1204260:five_prime_UTR
GGAGTTGATACTTCTGGGGA+TGG 0.475245 8_1:-59777842 Msa1204260:CDS
CAAATGAATGTTTAGCCTCA+TGG 0.478496 8_1:+59778380 None:intergenic
TGAATGAGTTCTCCTGCATT+GGG 0.481793 8_1:+59777311 None:intergenic
AGGTTACATTGGGCTAGAGA+TGG 0.486720 8_1:-59778014 Msa1204260:CDS
GAGTACTTAGCTGGTAAGGT+TGG 0.487434 8_1:-59777560 Msa1204260:CDS
CGGTCCAATGTTGGCACACA+AGG 0.493606 8_1:-59777609 Msa1204260:CDS
GTCTCGGGTGTCTATGCAAT+TGG 0.495457 8_1:-59777644 Msa1204260:CDS
GGCGAACTTGGCTCGTAGGA+AGG 0.497240 8_1:-59779751 Msa1204260:CDS
CCCTGCTATTGGCCATGAAA+GGG 0.502849 8_1:+59777420 None:intergenic
ATCGAAAAGCGTGGTGCTCT+TGG 0.503316 8_1:-59779561 Msa1204260:CDS
ATAGACACCCGAGACATTTG+TGG 0.506046 8_1:+59777652 None:intergenic
ACCCCGAGGTTGCTTCTGTA+GGG 0.507942 8_1:-59777496 Msa1204260:CDS
TGTAGGGAAGACAGAGGAGC+AGG 0.508653 8_1:-59777480 Msa1204260:CDS
GGGTTCCGCTCTTCTTTCAT+CGG 0.511274 8_1:-59779730 Msa1204260:CDS
GATGTTGTCCTTGTATCTGC+TGG 0.512028 8_1:-59777764 Msa1204260:CDS
GCCCTGCTATTGGCCATGAA+AGG 0.515476 8_1:+59777419 None:intergenic
CGGATTTCTCCATCCATGGA+TGG 0.518110 8_1:+59777929 None:intergenic
TAATATATATCTCTCCTCTC+AGG 0.519824 8_1:-59776973 Msa1204260:three_prime_UTR
GAAAACGACGTCGTCATCAT+CGG 0.520382 8_1:-59779648 Msa1204260:CDS
CTAGAGATGGGCTCTGTATG+GGG 0.523383 8_1:-59778001 Msa1204260:CDS
CATCCATGGATGGAGAAATC+CGG 0.523667 8_1:-59777928 Msa1204260:CDS
GTAACATATGTCAAAGGATA+CGG 0.525267 8_1:-59778238 Msa1204260:CDS
CAGCGTTCTCTTGAAAAGCA+AGG 0.526866 8_1:-59777896 Msa1204260:CDS
GCACACAAGGCAGAAGAAGA+TGG 0.528923 8_1:-59777596 Msa1204260:CDS
CCCTTTCATGGCCAATAGCA+GGG 0.531192 8_1:-59777420 Msa1204260:CDS
CATTTGAAACTTTGACCCCA+TGG 0.533125 8_1:+59778353 None:intergenic
GAAAAGCGTGGTGCTCTTGG+TGG 0.534842 8_1:-59779558 Msa1204260:CDS
TGAAACTTTGACCCCATGGT+TGG 0.535838 8_1:+59778357 None:intergenic
ATCGCAGATTGTTCCATCCA+TGG 0.542630 8_1:-59777942 Msa1204260:CDS
AGCTGGTAAGGTTGGGCATG+TGG 0.543166 8_1:-59777552 Msa1204260:CDS
AAGCTTGTAGTTATTGGGGC+AGG 0.545180 8_1:-59778034 Msa1204260:CDS
TGAATTTGCATTGCAGGTGA+GGG 0.546116 8_1:-59780019 Msa1204260:five_prime_UTR
CTTCCCTACAGAAGCAACCT+CGG 0.546875 8_1:+59777493 None:intergenic
GGTTACATTGGGCTAGAGAT+GGG 0.547643 8_1:-59778013 Msa1204260:CDS
AAAATTCCTTTCACCATCTG+AGG 0.547911 8_1:-59778215 Msa1204260:CDS
AAACATTCATTTGCCAACCA+TGG 0.549901 8_1:-59778370 Msa1204260:CDS
CAAATTGTTGGTCAGAAGCG+TGG 0.550148 8_1:+59776907 None:intergenic
CTAACTGTTGAACCAGCAGC+TGG 0.550199 8_1:-59777812 Msa1204260:CDS
AATGGCGGCGACGTAACCGC+CGG 0.551240 8_1:+59779617 None:intergenic
GATGCAACCAACGTTGAGAC+AGG 0.551664 8_1:+59779533 None:intergenic
AAGCTGTTTCTAATCTGACC+CGG 0.552292 8_1:-59778291 Msa1204260:CDS
TTGGATGATGCCTTTGTGGA+GGG 0.553519 8_1:+59779951 None:intergenic
CTATGGCGAACTTGGCTCGT+AGG 0.555334 8_1:-59779755 Msa1204260:CDS
GAGTCCTACCAGCAGATACA+AGG 0.558562 8_1:+59777756 None:intergenic
GTCTCTGTAGACACCGTTGA+AGG 0.558670 8_1:-59778193 Msa1204260:CDS
AAGCTGAATACCAAGGTGGT+TGG 0.558857 8_1:-59777863 Msa1204260:CDS
GCGAACTTGGCTCGTAGGAA+GGG 0.560636 8_1:-59779750 Msa1204260:CDS
TTGTCCTTGTATCTGCTGGT+AGG 0.563808 8_1:-59777760 Msa1204260:CDS
GATTGACTTAGCTGCCATGA+TGG 0.564118 8_1:-59778326 Msa1204260:CDS
ATGGCGGCGACGTAACCGCC+GGG 0.564412 8_1:+59779618 None:intergenic
AACCCCGAGGTTGCTTCTGT+AGG 0.567406 8_1:-59777497 Msa1204260:CDS
AAGAATCTTAACGATGGCTA+TGG 0.567804 8_1:-59779772 Msa1204260:exon
AAATTAAGTCCAGAAGTGAA+TGG 0.568714 8_1:+59777734 None:intergenic
AAATAGGCCTTCAATACCCC+GGG 0.569237 8_1:+59778273 None:intergenic
TGTAATTCCCGGTCCAATGT+TGG 0.569254 8_1:-59777618 Msa1204260:CDS
ACTTTCTCTCTAAGGTCAAG+AGG 0.569811 8_1:-59779690 Msa1204260:CDS
GTTTAGCCTCATGGTACATG+TGG 0.570391 8_1:+59778389 None:intergenic
CAAGAAGCTTGTAGTTATTG+GGG 0.570780 8_1:-59778038 Msa1204260:CDS
AGCTGTTTCTAATCTGACCC+GGG 0.571089 8_1:-59778290 Msa1204260:CDS
TAAATAGGCCTTCAATACCC+CGG 0.573925 8_1:+59778272 None:intergenic
CAGATTGTTCCATCCATGGA+TGG 0.574676 8_1:-59777938 Msa1204260:CDS
GGCTGTTAAAGAAGCCGCAA+TGG 0.578312 8_1:-59777207 Msa1204260:CDS
GACGTCGTCATCATCGGTGG+TGG 0.579886 8_1:-59779642 Msa1204260:CDS
CAGAGACCTCAGATGGTGAA+AGG 0.580741 8_1:+59778209 None:intergenic
CTTGTGTGCCAACATTGGAC+CGG 0.581579 8_1:+59777610 None:intergenic
AAATTGTTGGTCAGAAGCGT+GGG 0.582349 8_1:+59776908 None:intergenic
CTTGGATGATGCCTTTGTGG+AGG 0.584619 8_1:+59779950 None:intergenic
ACTGGAGTTCAATACCGTGT+TGG 0.590339 8_1:-59777449 Msa1204260:CDS
GAGATATATATTATTCAGCA+AGG 0.591234 8_1:+59776983 None:intergenic
AACAAGGTAACATATGTCAA+AGG 0.591345 8_1:-59778244 Msa1204260:CDS
AAGGTATCTTCTCGAAGTCA+AGG 0.591582 8_1:+59777103 None:intergenic
AAGCATATCATTATAGCCAC+CGG 0.595212 8_1:-59778148 Msa1204260:CDS
TTCCGCTCTTCTTTCATCGG+CGG 0.602872 8_1:-59779727 Msa1204260:CDS
GTGAATTGGCTTGTCATAAG+TGG 0.602908 8_1:+59777184 None:intergenic
GTGGACTATGACAAAGTACC+AGG 0.603832 8_1:-59777533 Msa1204260:CDS
GGTGAAAATACTGTTGTGAA+AGG 0.605474 8_1:-59778172 Msa1204260:CDS
CATGGCCAATAGCAGGGCGA+AGG 0.605899 8_1:-59777414 Msa1204260:CDS
CCAATAATGGCCCTCCACAA+AGG 0.609921 8_1:-59779961 Msa1204260:five_prime_UTR
GGTTGGAGTTGATACTTCTG+GGG 0.615833 8_1:-59777846 Msa1204260:CDS
CAATAACTACAAGCTTCTTG+GGG 0.618034 8_1:+59778041 None:intergenic
CTAATAAGAATAGAAAGCAA+AGG 0.619702 8_1:-59780043 None:intergenic
GGTGGTACCTGTCTCAACGT+TGG 0.621896 8_1:-59779540 Msa1204260:CDS
AGTATCAACTCCAACCACCT+TGG 0.623456 8_1:+59777853 None:intergenic
ACCTTAGAGAGAAAGTGTAA+CGG 0.630266 8_1:+59779697 None:intergenic
ATGGGGACGAATTGGCTCTG+AGG 0.631020 8_1:-59777984 Msa1204260:CDS
AAGGCAATTGATAACGCTGA+AGG 0.632613 8_1:-59777395 Msa1204260:CDS
TTGTGTGCCAACATTGGACC+GGG 0.636415 8_1:+59777611 None:intergenic
GGAGTTGAAACTGACAAGGT+AGG 0.637183 8_1:-59777701 Msa1204260:CDS
TGGGGTCAAAGTTTCAAATG+TGG 0.638191 8_1:-59778350 Msa1204260:CDS
TCAGATGTAAAATCTCTACC+TGG 0.641837 8_1:-59778124 Msa1204260:CDS
AGGAGACAGACAAAATATTG+GGG 0.643071 8_1:-59777349 Msa1204260:CDS
GGGTTTGTATAGACAACACC+TGG 0.647094 8_1:+59777515 None:intergenic
AGAAAATTGTATCATCAACA+GGG 0.647191 8_1:-59778084 Msa1204260:CDS
TAGAAGAAGAATCTTAACGA+TGG 0.649345 8_1:-59779778 Msa1204260:exon
GTGTCTACAGAGACCTCAGA+TGG 0.651528 8_1:+59778202 None:intergenic
AACTTAAACCAAGTGAACAA+AGG 0.652140 8_1:+59776856 None:intergenic
ATTACAAGATTGCTCCTGAG+AGG 0.653847 8_1:+59776959 None:intergenic
AACGACGTCGTCATCATCGG+TGG 0.658246 8_1:-59779645 Msa1204260:CDS
TGCACATCCAACAATGAGTG+AGG 0.658611 8_1:-59777228 Msa1204260:CDS
TTTAGCCTCATGGTACATGT+GGG 0.660235 8_1:+59778390 None:intergenic
GCAGTATGATGCATCAAGTG+AGG 0.668547 8_1:-59777270 Msa1204260:CDS
GCTGTTTCTAATCTGACCCG+GGG 0.668806 8_1:-59778289 Msa1204260:CDS
TGAAAGGGAACTTCCCAACA+CGG 0.669482 8_1:+59777435 None:intergenic
ATCGAAATGGAACCTTGGAA+GGG 0.671194 8_1:+59779511 None:intergenic
GAATCTAAATTTAACACACA+AGG 0.671699 8_1:+59777084 None:intergenic
ACCACTTGCATCGAAAAGCG+TGG 0.672031 8_1:-59779570 Msa1204260:CDS
CTCCGCCGATGAAAGAAGAG+CGG 0.675152 8_1:+59779725 None:intergenic
GAAATTCAAGCTGAATACCA+AGG 0.679504 8_1:-59777870 Msa1204260:CDS
GAAAATTGTATCATCAACAG+GGG 0.680955 8_1:-59778083 Msa1204260:CDS
CTTGTCATAAGTGGCCATTG+CGG 0.687064 8_1:+59777193 None:intergenic
TGCATCATACTGCAATGCAA+TGG 0.690908 8_1:+59777280 None:intergenic
TCCCTACAGAAGCAACCTCG+GGG 0.694823 8_1:+59777495 None:intergenic
AAGCTGAGCAGCTTTAATGG+CGG 0.697561 8_1:+59779602 None:intergenic
ACTGTTGAACCAGCAGCTGG+TGG 0.697745 8_1:-59777809 Msa1204260:CDS
ACATTCATTTGCCAACCATG+GGG 0.697828 8_1:-59778368 Msa1204260:CDS
GATAGGAGTTGAAACTGACA+AGG 0.698372 8_1:-59777705 Msa1204260:CDS
ATCATCGGTGGTGGTCCCGG+CGG 0.698397 8_1:-59779633 Msa1204260:CDS
TGCTTCTGTAGGGAAGACAG+AGG 0.698830 8_1:-59777486 Msa1204260:CDS
TTCTTCCCACATGTACCATG+AGG 0.705759 8_1:-59778395 Msa1204260:CDS
GGAGACAGACAAAATATTGG+GGG 0.714541 8_1:-59777348 Msa1204260:CDS
ATTCAAGCTGAATACCAAGG+TGG 0.721568 8_1:-59777867 Msa1204260:CDS
TGTTGTCTATACAAACCCCG+AGG 0.780319 8_1:-59777510 Msa1204260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTATTAAAATAATACAT+GGG + chr8_1:59778385-59778404 None:intergenic 10.0%
!! ATTACTATTAAAATAATACA+TGG + chr8_1:59778386-59778405 None:intergenic 10.0%
!! ATATTAAAAAATCCCAATAA+TGG - chr8_1:59776866-59776885 Msa1204260:three_prime_UTR 15.0%
!!! TTTTTAATTGATTAAGTTGA+AGG - chr8_1:59777440-59777459 Msa1204260:CDS 15.0%
!!! TTTTTGTTATTTTCGATTTT+TGG - chr8_1:59777471-59777490 Msa1204260:CDS 15.0%
!! CTAAAACAAAAGATAAAATA+AGG - chr8_1:59777716-59777735 Msa1204260:CDS 15.0%
!! AGCATATTATATTAAATCAT+TGG - chr8_1:59778192-59778211 Msa1204260:CDS 15.0%
!! ATATCATTTAACATACAATT+TGG + chr8_1:59778263-59778282 None:intergenic 15.0%
!! AAATTGTATGTTAAATGATA+TGG - chr8_1:59778262-59778281 Msa1204260:CDS 15.0%
!! TACTATTAAAATAATACATG+GGG + chr8_1:59778384-59778403 None:intergenic 15.0%
!! CTATATGAGAAAAAATGAAT+AGG + chr8_1:59777372-59777391 None:intergenic 20.0%
!! AATTAAAAAATACTTGACAC+AGG + chr8_1:59778089-59778108 None:intergenic 20.0%
!!! TTACCTTGTTTTTCTTAAAT+AGG + chr8_1:59778586-59778605 None:intergenic 20.0%
!!! AATCTTGTAATTTTGACAAT+TGG - chr8_1:59779893-59779912 Msa1204260:five_prime_UTR 20.0%
!!! ATCTTGTAATTTTGACAATT+GGG - chr8_1:59779894-59779913 Msa1204260:five_prime_UTR 20.0%
!! GAAGATGAAAATAAATCATA+TGG + chr8_1:59779965-59779984 None:intergenic 20.0%
! AATATTTATGTCATTGGACT+TGG + chr8_1:59776911-59776930 None:intergenic 25.0%
! CCAAGAAATATTTATGTCAT+TGG + chr8_1:59776917-59776936 None:intergenic 25.0%
! CCAATGACATAAATATTTCT+TGG - chr8_1:59776914-59776933 Msa1204260:three_prime_UTR 25.0%
! TTCTCATATAGATATAGATG+TGG - chr8_1:59777381-59777400 Msa1204260:CDS 25.0%
!! TGTTTATATTTCTGTGTCTT+TGG - chr8_1:59777555-59777574 Msa1204260:CDS 25.0%
! ATTATTAGATTTAGCTGGAT+GGG - chr8_1:59777946-59777965 Msa1204260:CDS 25.0%
!!! TCTTTTTTAAAGTCTACTCT+TGG - chr8_1:59778060-59778079 Msa1204260:CDS 25.0%
! AGAGAGTAAACATATTGTTA+TGG - chr8_1:59778135-59778154 Msa1204260:CDS 25.0%
! ACATTCAATTCGTTAATCAA+CGG + chr8_1:59778162-59778181 None:intergenic 25.0%
! AAGAAAATTGTATCATCAAC+AGG - chr8_1:59778755-59778774 Msa1204260:intron 25.0%
! AGAAAATTGTATCATCAACA+GGG - chr8_1:59778756-59778775 Msa1204260:intron 25.0%
! GAATCTAAATTTAACACACA+AGG + chr8_1:59779759-59779778 None:intergenic 25.0%
! TGTGTGTTAAATTTAGATTC+AGG - chr8_1:59779759-59779778 Msa1204260:CDS 25.0%
! GAGATATATATTATTCAGCA+AGG + chr8_1:59779860-59779879 None:intergenic 25.0%
TAGAAGAAGAATCTTAACGA+TGG - chr8_1:59777062-59777081 Msa1204260:three_prime_UTR 30.0%
AGTAGAAAAGTGAATCGAAA+TGG + chr8_1:59777345-59777364 None:intergenic 30.0%
!! CTTTGATTTTGGATGAACAT+CGG - chr8_1:59777531-59777550 Msa1204260:CDS 30.0%
TTAAGCTGTTTATCCAAACA+GGG + chr8_1:59777650-59777669 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + chr8_1:59777651-59777670 None:intergenic 30.0%
ATGAATAGCGCTTATGTATA+AGG - chr8_1:59777688-59777707 Msa1204260:CDS 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr8_1:59777801-59777820 Msa1204260:CDS 30.0%
TCCAGCTAAATCTAATAATC+CGG + chr8_1:59777945-59777964 None:intergenic 30.0%
GATTATTAGATTTAGCTGGA+TGG - chr8_1:59777945-59777964 Msa1204260:CDS 30.0%
! TAACTTTTCGTAGAGTCATT+TGG - chr8_1:59778025-59778044 Msa1204260:CDS 30.0%
ATGTTTACTCTCTAACATCT+GGG + chr8_1:59778128-59778147 None:intergenic 30.0%
TATGTTTACTCTCTAACATC+TGG + chr8_1:59778129-59778148 None:intergenic 30.0%
! ACTCTTGATTTTCTCACTTT+AGG - chr8_1:59778233-59778252 Msa1204260:CDS 30.0%
! CTCTTGATTTTCTCACTTTA+GGG - chr8_1:59778234-59778253 Msa1204260:CDS 30.0%
! TCTTGATTTTCTCACTTTAG+GGG - chr8_1:59778235-59778254 Msa1204260:CDS 30.0%
GTATGTTAAATGATATGGTC+TGG - chr8_1:59778267-59778286 Msa1204260:CDS 30.0%
! TAAATGATATGGTCTGGAAT+TGG - chr8_1:59778273-59778292 Msa1204260:CDS 30.0%
AGGCCTATTTAAGAAAAACA+AGG - chr8_1:59778580-59778599 Msa1204260:intron 30.0%
AACAAGGTAACATATGTCAA+AGG - chr8_1:59778596-59778615 Msa1204260:intron 30.0%
GTAACATATGTCAAAGGATA+CGG - chr8_1:59778602-59778621 Msa1204260:intron 30.0%
! AACAGTATTTTCACCTTCAA+CGG + chr8_1:59778663-59778682 None:intergenic 30.0%
! TAGAGATTTTACATCTGAAC+CGG + chr8_1:59778714-59778733 None:intergenic 30.0%
GAAAATTGTATCATCAACAG+GGG - chr8_1:59778757-59778776 Msa1204260:intron 30.0%
AAATTAAGTCCAGAAGTGAA+TGG + chr8_1:59779109-59779128 None:intergenic 30.0%
ATTCACTTCTGGACTTAATT+TGG - chr8_1:59779108-59779127 Msa1204260:intron 30.0%
TGTCAAGATAATTGCTGAAA+AGG - chr8_1:59779471-59779490 Msa1204260:intron 30.0%
AAAGGAGACAGACAAAATAT+TGG - chr8_1:59779489-59779508 Msa1204260:intron 30.0%
AAGGAGACAGACAAAATATT+GGG - chr8_1:59779490-59779509 Msa1204260:intron 30.0%
!! CTTGTTTTCATTTTTGTCCA+AGG - chr8_1:59779708-59779727 Msa1204260:CDS 30.0%
TAATATATATCTCTCCTCTC+AGG - chr8_1:59779867-59779886 Msa1204260:five_prime_UTR 30.0%
ATATGGATCACTCAAATTGT+TGG + chr8_1:59779948-59779967 None:intergenic 30.0%
AACTTAAACCAAGTGAACAA+AGG + chr8_1:59779987-59780006 None:intergenic 30.0%
AAGAATCTTAACGATGGCTA+TGG - chr8_1:59777068-59777087 Msa1204260:three_prime_UTR 35.0%
! ACCTTAGAGAGAAAGTGTAA+CGG + chr8_1:59777146-59777165 None:intergenic 35.0%
!!! CAAGTTAGTTTTTTCTGCTG+AGG - chr8_1:59777499-59777518 Msa1204260:CDS 35.0%
TCTTGATTTAATGCCCTGTT+TGG - chr8_1:59777634-59777653 Msa1204260:CDS 35.0%
ACCGGATTATTAGATTTAGC+TGG - chr8_1:59777941-59777960 Msa1204260:CDS 35.0%
AAAACCATATTCCACTAGGT+GGG + chr8_1:59778341-59778360 None:intergenic 35.0%
AACCAAAACCATATTCCACT+AGG + chr8_1:59778345-59778364 None:intergenic 35.0%
TTGTGTTGCCTTCATATTTC+AGG - chr8_1:59778412-59778431 Msa1204260:intron 35.0%
CAAATGAATGTTTAGCCTCA+TGG + chr8_1:59778463-59778482 None:intergenic 35.0%
AAACATTCATTTGCCAACCA+TGG - chr8_1:59778470-59778489 Msa1204260:intron 35.0%
AACATTCATTTGCCAACCAT+GGG - chr8_1:59778471-59778490 Msa1204260:intron 35.0%
AAAATTCCTTTCACCATCTG+AGG - chr8_1:59778625-59778644 Msa1204260:intron 35.0%
GGTGAAAATACTGTTGTGAA+AGG - chr8_1:59778668-59778687 Msa1204260:intron 35.0%
AAGCATATCATTATAGCCAC+CGG - chr8_1:59778692-59778711 Msa1204260:intron 35.0%
TCAGATGTAAAATCTCTACC+TGG - chr8_1:59778716-59778735 Msa1204260:intron 35.0%
CAATAACTACAAGCTTCTTG+GGG + chr8_1:59778802-59778821 None:intergenic 35.0%
CCAATAACTACAAGCTTCTT+GGG + chr8_1:59778803-59778822 None:intergenic 35.0%
CCAAGAAGCTTGTAGTTATT+GGG - chr8_1:59778801-59778820 Msa1204260:intron 35.0%
CAAGAAGCTTGTAGTTATTG+GGG - chr8_1:59778802-59778821 Msa1204260:intron 35.0%
GAAATTCAAGCTGAATACCA+AGG - chr8_1:59778970-59778989 Msa1204260:intron 35.0%
GACAACATCTGCTTCAATTA+TGG + chr8_1:59779065-59779084 None:intergenic 35.0%
! GGACTTAATTTGGACAAGAT+AGG - chr8_1:59779118-59779137 Msa1204260:intron 35.0%
!! GACGCATTTTGGTAAATGAA+AGG - chr8_1:59779161-59779180 Msa1204260:intron 35.0%
! AAGGTTTTCCACAAATGTCT+CGG - chr8_1:59779180-59779199 Msa1204260:intron 35.0%
AGGAGACAGACAAAATATTG+GGG - chr8_1:59779491-59779510 Msa1204260:intron 35.0%
! AATATTGGGGGTGCATATTA+TGG - chr8_1:59779504-59779523 Msa1204260:intron 35.0%
CAAGAGAATAAAGAAGCAAC+AGG + chr8_1:59779692-59779711 None:intergenic 35.0%
TTCATCTTCCTTTGTTCACT+TGG - chr8_1:59779976-59779995 Msa1204260:five_prime_UTR 35.0%
AAAGGCTGAATTTGCATTGC+AGG - chr8_1:59776815-59776834 Msa1204260:three_prime_UTR 40.0%
TGAATTTGCATTGCAGGTGA+GGG - chr8_1:59776821-59776840 Msa1204260:three_prime_UTR 40.0%
TCCGTTACACTTTCTCTCTA+AGG - chr8_1:59777142-59777161 Msa1204260:three_prime_UTR 40.0%
!! ACTTTCTCTCTAAGGTCAAG+AGG - chr8_1:59777150-59777169 Msa1204260:three_prime_UTR 40.0%
ATCGAAATGGAACCTTGGAA+GGG + chr8_1:59777332-59777351 None:intergenic 40.0%
AATCGAAATGGAACCTTGGA+AGG + chr8_1:59777333-59777352 None:intergenic 40.0%
AGTGAATCGAAATGGAACCT+TGG + chr8_1:59777337-59777356 None:intergenic 40.0%
!!! GTTAGTTTTTTCTGCTGAGG+TGG - chr8_1:59777502-59777521 Msa1204260:CDS 40.0%
!!! GGTGGAGAGTACTTTGATTT+TGG - chr8_1:59777520-59777539 Msa1204260:CDS 40.0%
!! GCTGTTTTCTTAAGCTGTCA+TGG - chr8_1:59777766-59777785 Msa1204260:CDS 40.0%
AAGCTGTCATGGAGAACTTA+TGG - chr8_1:59777777-59777796 Msa1204260:CDS 40.0%
AAACACTTGCGAGACTGTTT+GGG + chr8_1:59777856-59777875 None:intergenic 40.0%
AAAACACTTGCGAGACTGTT+TGG + chr8_1:59777857-59777876 None:intergenic 40.0%
AAACCATATTCCACTAGGTG+GGG + chr8_1:59778340-59778359 None:intergenic 40.0%
CAAAACCATATTCCACTAGG+TGG + chr8_1:59778342-59778361 None:intergenic 40.0%
! CACCTAGTGGAATATGGTTT+TGG - chr8_1:59778340-59778359 Msa1204260:CDS 40.0%
!! CAAAAGCGCCTGAAATATGA+AGG + chr8_1:59778423-59778442 None:intergenic 40.0%
TTTAGCCTCATGGTACATGT+GGG + chr8_1:59778453-59778472 None:intergenic 40.0%
ACATTCATTTGCCAACCATG+GGG - chr8_1:59778472-59778491 Msa1204260:intron 40.0%
! CATTTGAAACTTTGACCCCA+TGG + chr8_1:59778490-59778509 None:intergenic 40.0%
TGGGGTCAAAGTTTCAAATG+TGG - chr8_1:59778490-59778509 Msa1204260:intron 40.0%
! TTTGTCTTTTTGCGCCATCA+TGG + chr8_1:59778531-59778550 None:intergenic 40.0%
!! AAGCTGTTTCTAATCTGACC+CGG - chr8_1:59778549-59778568 Msa1204260:intron 40.0%
TAAATAGGCCTTCAATACCC+CGG + chr8_1:59778571-59778590 None:intergenic 40.0%
! AGATTTTACATCTGAACCGG+TGG + chr8_1:59778711-59778730 None:intergenic 40.0%
! TTTTCATCAATAGTGACGCC+AGG + chr8_1:59778737-59778756 None:intergenic 40.0%
CCCAAGAAGCTTGTAGTTAT+TGG - chr8_1:59778800-59778819 Msa1204260:intron 40.0%
CCCAATAACTACAAGCTTCT+TGG + chr8_1:59778804-59778823 None:intergenic 40.0%
TTATTGGGGCAGGTTACATT+GGG - chr8_1:59778816-59778835 Msa1204260:intron 40.0%
ATTCAAGCTGAATACCAAGG+TGG - chr8_1:59778973-59778992 Msa1204260:intron 40.0%
!! TGGTTGGAGTTGATACTTCT+GGG - chr8_1:59778993-59779012 Msa1204260:intron 40.0%
GATAGGAGTTGAAACTGACA+AGG - chr8_1:59779135-59779154 Msa1204260:intron 40.0%
! AGGTTTTCCACAAATGTCTC+GGG - chr8_1:59779181-59779200 Msa1204260:intron 40.0%
!! GCAATTGGTGATGTAATTCC+CGG - chr8_1:59779211-59779230 Msa1204260:intron 40.0%
TGTTGAGTACTTAGCTGGTA+AGG - chr8_1:59779276-59779295 Msa1204260:intron 40.0%
AGTACTTAGCTGGTAAGGTT+GGG - chr8_1:59779281-59779300 Msa1204260:intron 40.0%
!! AAGGCAATTGATAACGCTGA+AGG - chr8_1:59779445-59779464 Msa1204260:intron 40.0%
GGAGACAGACAAAATATTGG+GGG - chr8_1:59779492-59779511 Msa1204260:intron 40.0%
TGAATGAGTTCTCCTGCATT+GGG + chr8_1:59779532-59779551 None:intergenic 40.0%
ATGAATGAGTTCTCCTGCAT+TGG + chr8_1:59779533-59779552 None:intergenic 40.0%
TGCATCATACTGCAATGCAA+TGG + chr8_1:59779563-59779582 None:intergenic 40.0%
TTAACAGCCTCACTCATTGT+TGG + chr8_1:59779622-59779641 None:intergenic 40.0%
!! GTGAATTGGCTTGTCATAAG+TGG + chr8_1:59779659-59779678 None:intergenic 40.0%
CAGGCTCTTCAAATGTGAAT+TGG + chr8_1:59779673-59779692 None:intergenic 40.0%
CGAAGTCAAGGTAAAATCCT+TGG + chr8_1:59779728-59779747 None:intergenic 40.0%
! AAGGTATCTTCTCGAAGTCA+AGG + chr8_1:59779740-59779759 None:intergenic 40.0%
ATTACAAGATTGCTCCTGAG+AGG + chr8_1:59779884-59779903 None:intergenic 40.0%
! AAATTGTTGGTCAGAAGCGT+GGG + chr8_1:59779935-59779954 None:intergenic 40.0%
CTGAATTTGCATTGCAGGTG+AGG - chr8_1:59776820-59776839 Msa1204260:three_prime_UTR 45.0%
CTTTGTGGAGGGCCATTATT+GGG + chr8_1:59776881-59776900 None:intergenic 45.0%
TTGGATGATGCCTTTGTGGA+GGG + chr8_1:59776892-59776911 None:intergenic 45.0%
!! GACGTCGTTTTCATCAGATC+CGG + chr8_1:59777184-59777203 None:intergenic 45.0%
GAAAACGACGTCGTCATCAT+CGG - chr8_1:59777192-59777211 Msa1204260:CDS 45.0%
! AAGCTGAGCAGCTTTAATGG+CGG + chr8_1:59777241-59777260 None:intergenic 45.0%
! ACCAAGCTGAGCAGCTTTAA+TGG + chr8_1:59777244-59777263 None:intergenic 45.0%
GACAAGCGCTTAGACATGAA+GGG + chr8_1:59777918-59777937 None:intergenic 45.0%
AGACAAGCGCTTAGACATGA+AGG + chr8_1:59777919-59777938 None:intergenic 45.0%
GTCTAAGCGCTTGTCTTAAC+CGG - chr8_1:59777923-59777942 Msa1204260:CDS 45.0%
TTCTTCCCACATGTACCATG+AGG - chr8_1:59778445-59778464 Msa1204260:intron 45.0%
GTTTAGCCTCATGGTACATG+TGG + chr8_1:59778454-59778473 None:intergenic 45.0%
TGAAACTTTGACCCCATGGT+TGG + chr8_1:59778486-59778505 None:intergenic 45.0%
! GATTGACTTAGCTGCCATGA+TGG - chr8_1:59778514-59778533 Msa1204260:intron 45.0%
!! AGCTGTTTCTAATCTGACCC+GGG - chr8_1:59778550-59778569 Msa1204260:intron 45.0%
AAATAGGCCTTCAATACCCC+GGG + chr8_1:59778570-59778589 None:intergenic 45.0%
AAGCTTGTAGTTATTGGGGC+AGG - chr8_1:59778806-59778825 Msa1204260:intron 45.0%
GTTATTGGGGCAGGTTACAT+TGG - chr8_1:59778815-59778834 Msa1204260:intron 45.0%
! AGGTTACATTGGGCTAGAGA+TGG - chr8_1:59778826-59778845 Msa1204260:intron 45.0%
! GGTTACATTGGGCTAGAGAT+GGG - chr8_1:59778827-59778846 Msa1204260:intron 45.0%
ATCGCAGATTGTTCCATCCA+TGG - chr8_1:59778898-59778917 Msa1204260:intron 45.0%
CAGATTGTTCCATCCATGGA+TGG - chr8_1:59778902-59778921 Msa1204260:intron 45.0%
CATCCATGGATGGAGAAATC+CGG - chr8_1:59778912-59778931 Msa1204260:intron 45.0%
CAGCGTTCTCTTGAAAAGCA+AGG - chr8_1:59778944-59778963 Msa1204260:intron 45.0%
AAGCTGAATACCAAGGTGGT+TGG - chr8_1:59778977-59778996 Msa1204260:intron 45.0%
AGTATCAACTCCAACCACCT+TGG + chr8_1:59778990-59779009 None:intergenic 45.0%
!! GTGGTTGGAGTTGATACTTC+TGG - chr8_1:59778992-59779011 Msa1204260:intron 45.0%
!! GGTTGGAGTTGATACTTCTG+GGG - chr8_1:59778994-59779013 Msa1204260:intron 45.0%
GATGTTGTCCTTGTATCTGC+TGG - chr8_1:59779076-59779095 Msa1204260:intron 45.0%
TTGTCCTTGTATCTGCTGGT+AGG - chr8_1:59779080-59779099 Msa1204260:intron 45.0%
GGAGTTGAAACTGACAAGGT+AGG - chr8_1:59779139-59779158 Msa1204260:intron 45.0%
! TGACAAGGTAGGACGCATTT+TGG - chr8_1:59779150-59779169 Msa1204260:intron 45.0%
ATAGACACCCGAGACATTTG+TGG + chr8_1:59779191-59779210 None:intergenic 45.0%
TGTAATTCCCGGTCCAATGT+TGG - chr8_1:59779222-59779241 Msa1204260:intron 45.0%
GCTTGTGTTGAGTACTTAGC+TGG - chr8_1:59779271-59779290 Msa1204260:intron 45.0%
GAGTACTTAGCTGGTAAGGT+TGG - chr8_1:59779280-59779299 Msa1204260:intron 45.0%
! GTGGACTATGACAAAGTACC+AGG - chr8_1:59779307-59779326 Msa1204260:intron 45.0%
GGGTTTGTATAGACAACACC+TGG + chr8_1:59779328-59779347 None:intergenic 45.0%
TGTTGTCTATACAAACCCCG+AGG - chr8_1:59779330-59779349 Msa1204260:intron 45.0%
ACTGGAGTTCAATACCGTGT+TGG - chr8_1:59779391-59779410 Msa1204260:intron 45.0%
CTGGAGTTCAATACCGTGTT+GGG - chr8_1:59779392-59779411 Msa1204260:intron 45.0%
TGAAAGGGAACTTCCCAACA+CGG + chr8_1:59779408-59779427 None:intergenic 45.0%
TGTTGGGAAGTTCCCTTTCA+TGG - chr8_1:59779408-59779427 Msa1204260:intron 45.0%
CATATTATGGCACCCAATGC+AGG - chr8_1:59779517-59779536 Msa1204260:intron 45.0%
GCAGTATGATGCATCAAGTG+AGG - chr8_1:59779570-59779589 Msa1204260:CDS 45.0%
TGCACATCCAACAATGAGTG+AGG - chr8_1:59779612-59779631 Msa1204260:CDS 45.0%
CTTGTCATAAGTGGCCATTG+CGG + chr8_1:59779650-59779669 None:intergenic 45.0%
CAAATTGTTGGTCAGAAGCG+TGG + chr8_1:59779936-59779955 None:intergenic 45.0%
!! TTATAAATATTAAAGAAAAT+AGG - chr8_1:59776973-59776992 Msa1204260:three_prime_UTR 5.0%
CCTTTGTGGAGGGCCATTAT+TGG + chr8_1:59776882-59776901 None:intergenic 50.0%
CCAATAATGGCCCTCCACAA+AGG - chr8_1:59776879-59776898 Msa1204260:three_prime_UTR 50.0%
CTTGGATGATGCCTTTGTGG+AGG + chr8_1:59776893-59776912 None:intergenic 50.0%
GGACTTGGATGATGCCTTTG+TGG + chr8_1:59776896-59776915 None:intergenic 50.0%
TGTGCGTGTGTGTGTGTGTT+AGG - chr8_1:59777002-59777021 Msa1204260:three_prime_UTR 50.0%
AACGATGGCTATGGCGAACT+TGG - chr8_1:59777077-59777096 Msa1204260:three_prime_UTR 50.0%
GGGTTCCGCTCTTCTTTCAT+CGG - chr8_1:59777110-59777129 Msa1204260:three_prime_UTR 50.0%
TTCCGCTCTTCTTTCATCGG+CGG - chr8_1:59777113-59777132 Msa1204260:three_prime_UTR 50.0%
AGGTCAAGAGGTTTCGCTTC+CGG - chr8_1:59777162-59777181 Msa1204260:exon 50.0%
GCCATTAAAGCTGCTCAGCT+TGG - chr8_1:59777240-59777259 Msa1204260:CDS 50.0%
ACCACTTGCATCGAAAAGCG+TGG - chr8_1:59777270-59777289 Msa1204260:CDS 50.0%
! ACCACGCTTTTCGATGCAAG+TGG + chr8_1:59777274-59777293 None:intergenic 50.0%
! ATCGAAAAGCGTGGTGCTCT+TGG - chr8_1:59777279-59777298 Msa1204260:CDS 50.0%
GATGCAACCAACGTTGAGAC+AGG + chr8_1:59777310-59777329 None:intergenic 50.0%
CACTAGGTGGGGTGACTATA+TGG + chr8_1:59778329-59778348 None:intergenic 50.0%
CATATAGTCACCCCACCTAG+TGG - chr8_1:59778327-59778346 Msa1204260:CDS 50.0%
TCACCCCACCTAGTGGAATA+TGG - chr8_1:59778334-59778353 Msa1204260:CDS 50.0%
!! GCTGTTTCTAATCTGACCCG+GGG - chr8_1:59778551-59778570 Msa1204260:intron 50.0%
!! AATCTGACCCGGGGTATTGA+AGG - chr8_1:59778560-59778579 Msa1204260:intron 50.0%
CAGAGACCTCAGATGGTGAA+AGG + chr8_1:59778634-59778653 None:intergenic 50.0%
GTGTCTACAGAGACCTCAGA+TGG + chr8_1:59778641-59778660 None:intergenic 50.0%
GTCTCTGTAGACACCGTTGA+AGG - chr8_1:59778647-59778666 Msa1204260:intron 50.0%
! GCTAGAGATGGGCTCTGTAT+GGG - chr8_1:59778838-59778857 Msa1204260:intron 50.0%
! CTAGAGATGGGCTCTGTATG+GGG - chr8_1:59778839-59778858 Msa1204260:intron 50.0%
CGGATTTCTCCATCCATGGA+TGG + chr8_1:59778914-59778933 None:intergenic 50.0%
CTTCCGGATTTCTCCATCCA+TGG + chr8_1:59778918-59778937 None:intergenic 50.0%
GAGAACGCTGAAACTGCTTC+CGG + chr8_1:59778934-59778953 None:intergenic 50.0%
!! GGAGTTGATACTTCTGGGGA+TGG - chr8_1:59778998-59779017 Msa1204260:intron 50.0%
CTAACTGTTGAACCAGCAGC+TGG - chr8_1:59779028-59779047 Msa1204260:intron 50.0%
GAGTCCTACCAGCAGATACA+AGG + chr8_1:59779087-59779106 None:intergenic 50.0%
GGTAGGACTCCATTCACTTC+TGG - chr8_1:59779097-59779116 Msa1204260:intron 50.0%
GTCTCGGGTGTCTATGCAAT+TGG - chr8_1:59779196-59779215 Msa1204260:intron 50.0%
TTGTGTGCCAACATTGGACC+GGG + chr8_1:59779232-59779251 None:intergenic 50.0%
CTTGTGTGCCAACATTGGAC+CGG + chr8_1:59779233-59779252 None:intergenic 50.0%
TCTGCCTTGTGTGCCAACAT+TGG + chr8_1:59779238-59779257 None:intergenic 50.0%
GCACACAAGGCAGAAGAAGA+TGG - chr8_1:59779244-59779263 Msa1204260:intron 50.0%
TTCCCTACAGAAGCAACCTC+GGG + chr8_1:59779349-59779368 None:intergenic 50.0%
CTTCCCTACAGAAGCAACCT+CGG + chr8_1:59779350-59779369 None:intergenic 50.0%
TGCTTCTGTAGGGAAGACAG+AGG - chr8_1:59779354-59779373 Msa1204260:intron 50.0%
GAAGACAGAGGAGCAGGTTA+AGG - chr8_1:59779366-59779385 Msa1204260:intron 50.0%
GAGGAGCAGGTTAAGGAAAC+TGG - chr8_1:59779373-59779392 Msa1204260:intron 50.0%
TCCCTTTCATGGCCAATAGC+AGG - chr8_1:59779419-59779438 Msa1204260:intron 50.0%
CCCTGCTATTGGCCATGAAA+GGG + chr8_1:59779423-59779442 None:intergenic 50.0%
CCCTTTCATGGCCAATAGCA+GGG - chr8_1:59779420-59779439 Msa1204260:intron 50.0%
AATTGCCTTCGCCCTGCTAT+TGG + chr8_1:59779434-59779453 None:intergenic 50.0%
GGCTGTTAAAGAAGCCGCAA+TGG - chr8_1:59779633-59779652 Msa1204260:CDS 50.0%
! CTATGGCGAACTTGGCTCGT+AGG - chr8_1:59777085-59777104 Msa1204260:three_prime_UTR 55.0%
! GCGAACTTGGCTCGTAGGAA+GGG - chr8_1:59777090-59777109 Msa1204260:three_prime_UTR 55.0%
CTCCGCCGATGAAAGAAGAG+CGG + chr8_1:59777118-59777137 None:intergenic 55.0%
AACGACGTCGTCATCATCGG+TGG - chr8_1:59777195-59777214 Msa1204260:CDS 55.0%
! GAAAAGCGTGGTGCTCTTGG+TGG - chr8_1:59777282-59777301 Msa1204260:CDS 55.0%
GGTGGTACCTGTCTCAACGT+TGG - chr8_1:59777300-59777319 Msa1204260:CDS 55.0%
! CGTTGGTTGCATCCCTTCCA+AGG - chr8_1:59777317-59777336 Msa1204260:CDS 55.0%
! GGCTAGAGATGGGCTCTGTA+TGG - chr8_1:59778837-59778856 Msa1204260:intron 55.0%
GGCTCTGTATGGGGACGAAT+TGG - chr8_1:59778848-59778867 Msa1204260:intron 55.0%
!! ATGGGGACGAATTGGCTCTG+AGG - chr8_1:59778856-59778875 Msa1204260:intron 55.0%
ACTGTTGAACCAGCAGCTGG+TGG - chr8_1:59779031-59779050 Msa1204260:intron 55.0%
CGGTCCAATGTTGGCACACA+AGG - chr8_1:59779231-59779250 Msa1204260:intron 55.0%
AGCTGGTAAGGTTGGGCATG+TGG - chr8_1:59779288-59779307 Msa1204260:intron 55.0%
AACCCCGAGGTTGCTTCTGT+AGG - chr8_1:59779343-59779362 Msa1204260:intron 55.0%
ACCCCGAGGTTGCTTCTGTA+GGG - chr8_1:59779344-59779363 Msa1204260:intron 55.0%
TCCCTACAGAAGCAACCTCG+GGG + chr8_1:59779348-59779367 None:intergenic 55.0%
TGTAGGGAAGACAGAGGAGC+AGG - chr8_1:59779360-59779379 Msa1204260:intron 55.0%
GCCCTGCTATTGGCCATGAA+AGG + chr8_1:59779424-59779443 None:intergenic 55.0%
! GGCGAACTTGGCTCGTAGGA+AGG - chr8_1:59777089-59777108 Msa1204260:three_prime_UTR 60.0%
GACGTCGTCATCATCGGTGG+TGG - chr8_1:59777198-59777217 Msa1204260:CDS 60.0%
! GTCATCATCGGTGGTGGTCC+CGG - chr8_1:59777204-59777223 Msa1204260:CDS 60.0%
GTCTGTTCACCACCAGCTGC+TGG + chr8_1:59779043-59779062 None:intergenic 60.0%
CATGGCCAATAGCAGGGCGA+AGG - chr8_1:59779426-59779445 Msa1204260:intron 60.0%
! ATCATCGGTGGTGGTCCCGG+CGG - chr8_1:59777207-59777226 Msa1204260:CDS 65.0%
AATGGCGGCGACGTAACCGC+CGG + chr8_1:59777226-59777245 None:intergenic 65.0%
ATGGCGGCGACGTAACCGCC+GGG + chr8_1:59777225-59777244 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59776802 59780060 59776802 ID=Msa1204260;Name=Msa1204260
chr8_1 mRNA 59776802 59780060 59776802 ID=Msa1204260-mRNA-1;Parent=Msa1204260;Name=Msa1204260-mRNA-1;_AED=0.00;_eAED=0.00;_QI=279|1|1|1|1|1|2|376|502
chr8_1 exon 59776802 59778428 59776802 ID=Msa1204260-mRNA-1:exon:19304;Parent=Msa1204260-mRNA-1
chr8_1 exon 59779524 59780060 59779524 ID=Msa1204260-mRNA-1:exon:19303;Parent=Msa1204260-mRNA-1
chr8_1 five_prime_UTR 59779782 59780060 59779782 ID=Msa1204260-mRNA-1:five_prime_utr;Parent=Msa1204260-mRNA-1
chr8_1 CDS 59779524 59779781 59779524 ID=Msa1204260-mRNA-1:cds;Parent=Msa1204260-mRNA-1
chr8_1 CDS 59777178 59778428 59777178 ID=Msa1204260-mRNA-1:cds;Parent=Msa1204260-mRNA-1
chr8_1 three_prime_UTR 59776802 59777177 59776802 ID=Msa1204260-mRNA-1:three_prime_utr;Parent=Msa1204260-mRNA-1
Gene Sequence

>Msa1204260

ATGGCTATGGCGAACTTGGCTCGTAGGAAGGGTTCCGCTCTTCTTTCATCGGCGGAGACTCTCCGTTACACTTTCTCTCTAAGGTCAAGAGGTTTCGCTTCCGGATCTGATGAAAACGACGTCGTCATCATCGGTGGTGGTCCCGGCGGTTACGTCGCCGCCATTAAAGCTGCTCAGCTTGGTTTCAAAACCACTTGCATCGAAAAGCGTGGTGCTCTTGGTGGTACCTGTCTCAACGTTGGTTGCATCCCTTCCAAGGCGCTTTTGCATTCTTCCCACATGTACCATGAGGCTAAACATTCATTTGCCAACCATGGGGTCAAAGTTTCAAATGTGGAGATTGACTTAGCTGCCATGATGGCGCAAAAAGACAAAGCTGTTTCTAATCTGACCCGGGGTATTGAAGGCCTATTTAAGAAAAACAAGGTAACATATGTCAAAGGATACGGAAAATTCCTTTCACCATCTGAGGTCTCTGTAGACACCGTTGAAGGTGAAAATACTGTTGTGAAAGGAAAGCATATCATTATAGCCACCGGTTCAGATGTAAAATCTCTACCTGGCGTCACTATTGATGAAAAGAAAATTGTATCATCAACAGGGGCTCTCGCATTGACTGAAATCCCCAAGAAGCTTGTAGTTATTGGGGCAGGTTACATTGGGCTAGAGATGGGCTCTGTATGGGGACGAATTGGCTCTGAGGCAACTGTTGTTGAGTTTGCATCGCAGATTGTTCCATCCATGGATGGAGAAATCCGGAAGCAGTTTCAGCGTTCTCTTGAAAAGCAAGGCATGAAATTCAAGCTGAATACCAAGGTGGTTGGAGTTGATACTTCTGGGGATGGTGTGAAGCTAACTGTTGAACCAGCAGCTGGTGGTGAACAGACCATAATTGAAGCAGATGTTGTCCTTGTATCTGCTGGTAGGACTCCATTCACTTCTGGACTTAATTTGGACAAGATAGGAGTTGAAACTGACAAGGTAGGACGCATTTTGGTAAATGAAAGGTTTTCCACAAATGTCTCGGGTGTCTATGCAATTGGTGATGTAATTCCCGGTCCAATGTTGGCACACAAGGCAGAAGAAGATGGAGTTGCTTGTGTTGAGTACTTAGCTGGTAAGGTTGGGCATGTGGACTATGACAAAGTACCAGGTGTTGTCTATACAAACCCCGAGGTTGCTTCTGTAGGGAAGACAGAGGAGCAGGTTAAGGAAACTGGAGTTCAATACCGTGTTGGGAAGTTCCCTTTCATGGCCAATAGCAGGGCGAAGGCAATTGATAACGCTGAAGGACTTGTCAAGATAATTGCTGAAAAGGAGACAGACAAAATATTGGGGGTGCATATTATGGCACCCAATGCAGGAGAACTCATTCATGAAGCAGCCATTGCATTGCAGTATGATGCATCAAGTGAGGACATAGCACGTGTTTGTCATGCACATCCAACAATGAGTGAGGCTGTTAAAGAAGCCGCAATGGCCACTTATGACAAGCCAATTCACATTTGA
Protein sequence

>Msa1204260

MAMANLARRKGSALLSSAETLRYTFSLRSRGFASGSDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFLSPSEVSVDTVEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALTEIPKKLVVIGAGYIGLEMGSVWGRIGSEATVVEFASQIVPSMDGEIRKQFQRSLEKQGMKFKLNTKVVGVDTSGDGVKLTVEPAAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKVGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVQYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAVKEAAMATYDKPIHI*