Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333910 | sp|O14162|YE7A_SCHPO | 27.869 | 244 | 127 | 9 | 77 | 311 | 306 | 509 | 4.43e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333910 | A0A396IIT9 | 95.652 | 414 | 15 | 2 | 1 | 414 | 1 | 411 | 0.0 | 817 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055410 | Msa1333910 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa1303780 | Msa1333910 | 0.814453 | 1.528678e-51 | -8.615850e-47 |
| Msa1333910 | Msa1363120 | 0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa1040830 | Msa1333910 | 0.805319 | 1.413479e-49 | -8.615850e-47 |
| Msa1221390 | Msa1333910 | 0.897602 | 1.198736e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333910 | MtrunA17_Chr4g0072801 | 95.652 | 414 | 15 | 2 | 1 | 414 | 1 | 411 | 0.0 | 817 |
| Msa1333910 | MtrunA17_Chr0c06g0493481 | 76.301 | 346 | 82 | 0 | 67 | 412 | 71 | 416 | 0.0 | 558 |
| Msa1333910 | MtrunA17_Chr3g0140681 | 56.180 | 356 | 145 | 5 | 62 | 412 | 48 | 397 | 1.18e-139 | 404 |
| Msa1333910 | MtrunA17_Chr1g0170451 | 54.006 | 337 | 141 | 3 | 77 | 413 | 31 | 353 | 7.78e-121 | 355 |
| Msa1333910 | MtrunA17_Chr8g0379001 | 45.531 | 358 | 168 | 6 | 75 | 412 | 88 | 438 | 2.53e-95 | 293 |
| Msa1333910 | MtrunA17_Chr2g0283771 | 44.675 | 338 | 169 | 5 | 75 | 399 | 82 | 414 | 8.83e-87 | 271 |
| Msa1333910 | MtrunA17_Chr7g0214251 | 51.724 | 87 | 39 | 2 | 145 | 231 | 43 | 126 | 3.31e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333910 | AT4G25770.1 | 67.847 | 339 | 95 | 3 | 75 | 412 | 91 | 416 | 1.77e-163 | 466 |
| Msa1333910 | AT4G25770.2 | 64.095 | 337 | 107 | 3 | 75 | 410 | 91 | 414 | 3.01e-149 | 430 |
| Msa1333910 | AT1G10040.1 | 56.305 | 341 | 137 | 4 | 75 | 412 | 79 | 410 | 3.96e-129 | 378 |
| Msa1333910 | AT5G51180.2 | 55.193 | 337 | 134 | 5 | 77 | 412 | 35 | 355 | 6.01e-120 | 353 |
| Msa1333910 | AT5G51180.1 | 55.193 | 337 | 134 | 5 | 77 | 412 | 35 | 355 | 6.01e-120 | 353 |
| Msa1333910 | AT1G10040.2 | 55.452 | 321 | 131 | 4 | 75 | 392 | 79 | 390 | 3.22e-118 | 350 |
| Msa1333910 | AT1G29120.1 | 43.288 | 365 | 176 | 6 | 64 | 411 | 91 | 441 | 1.34e-90 | 281 |
| Msa1333910 | AT1G29120.2 | 43.288 | 365 | 176 | 6 | 64 | 411 | 91 | 441 | 1.34e-90 | 281 |
| Msa1333910 | AT1G29120.8 | 43.288 | 365 | 176 | 6 | 64 | 411 | 92 | 442 | 1.42e-90 | 281 |
| Msa1333910 | AT1G29120.5 | 42.896 | 366 | 177 | 7 | 64 | 411 | 91 | 442 | 1.43e-87 | 273 |
| Msa1333910 | AT1G29120.7 | 43.466 | 352 | 168 | 6 | 64 | 398 | 91 | 428 | 2.31e-86 | 270 |
| Msa1333910 | AT1G29120.3 | 47.794 | 272 | 128 | 5 | 64 | 335 | 91 | 348 | 9.44e-79 | 249 |
| Msa1333910 | AT1G29120.4 | 47.794 | 272 | 128 | 5 | 64 | 335 | 91 | 348 | 1.25e-78 | 248 |
| Msa1333910 | AT1G29120.6 | 46.250 | 240 | 116 | 4 | 64 | 303 | 91 | 317 | 1.74e-67 | 217 |
Find 106 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGAATGAATTCGTTTC+TGG | 0.166783 | 8_4:+54183704 | Msa1333910:exon |
| CCTACTGACAACAGATATAT+TGG | 0.248979 | 8_4:+54188976 | Msa1333910:three_prime_UTR |
| TGGCTCTAAACCAGCGATTC+TGG | 0.256377 | 8_4:-54185273 | None:intergenic |
| CACCTTGTCATCATGGTTAA+TGG | 0.263443 | 8_4:+54183939 | Msa1333910:CDS |
| TCTTCAAAATTGACATTTGA+TGG | 0.269567 | 8_4:+54184862 | Msa1333910:CDS |
| GCACTATTATCCTCTACTTT+GGG | 0.270378 | 8_4:-54183891 | None:intergenic |
| AAATTTCATCGTCGACGATT+TGG | 0.273351 | 8_4:+54183843 | Msa1333910:CDS |
| CGGTGGACGATGACTTTATC+TGG | 0.282358 | 8_4:-54184122 | None:intergenic |
| ATTTGATGGTGTTGATACTA+TGG | 0.293233 | 8_4:+54184876 | Msa1333910:CDS |
| AACTTCGGCTTCTAATGTTT+TGG | 0.303374 | 8_4:-54185180 | None:intergenic |
| GTGTGAACATATGGACTATT+AGG | 0.321730 | 8_4:-54188931 | None:intergenic |
| AACGTTAATATATGCTTTGT+TGG | 0.329433 | 8_4:-54187250 | None:intergenic |
| GGCACATTCTTTGGGAGGCT+TGG | 0.330760 | 8_4:+54185121 | Msa1333910:CDS |
| CAAACTGCACATTTAATTGT+AGG | 0.343395 | 8_4:+54186429 | Msa1333910:CDS |
| CCATCATCATCATTATTATT+CGG | 0.347160 | 8_4:+54183786 | Msa1333910:CDS |
| TTTGAGATGCTCTTCTTTCA+AGG | 0.353953 | 8_4:-54186410 | None:intergenic |
| TTGTAGCTTCCATTTCTTTG+TGG | 0.358068 | 8_4:+54186378 | Msa1333910:intron |
| AGCACTATTATCCTCTACTT+TGG | 0.367479 | 8_4:-54183892 | None:intergenic |
| GGGGTCTCACTCAGGTTCAT+TGG | 0.376799 | 8_4:+54188480 | Msa1333910:CDS |
| AGTTCTGCTGATTGGAGATA+TGG | 0.382588 | 8_4:+54184074 | Msa1333910:intron |
| TCTATTGTCAGACGCTGGCC+TGG | 0.397053 | 8_4:+54185077 | Msa1333910:CDS |
| CATTTAATTGTAGGGAGAAC+TGG | 0.400593 | 8_4:+54186438 | Msa1333910:CDS |
| GAATGAATTCGTTTCTGGTA+TGG | 0.411846 | 8_4:+54183709 | Msa1333910:exon |
| ACCTTTGCCACGCCGCATCT+TGG | 0.416476 | 8_4:+54185308 | Msa1333910:CDS |
| CAATATATAGTGTGAACATA+TGG | 0.417623 | 8_4:-54188940 | None:intergenic |
| GGGTTAATTGTTTCTTGCAC+TGG | 0.421899 | 8_4:+54188997 | Msa1333910:three_prime_UTR |
| ACTATTTGCTTGCCAAGGAT+TGG | 0.426538 | 8_4:-54183575 | None:intergenic |
| TCCTCCTCACCTTGTCATCA+TGG | 0.426931 | 8_4:+54183932 | Msa1333910:CDS |
| ACATTCTTTGGGAGGCTTGG+TGG | 0.430561 | 8_4:+54185124 | Msa1333910:CDS |
| AAAGGAATGCCACAAAGAAA+TGG | 0.436032 | 8_4:-54186387 | None:intergenic |
| GCAAAGGTTATAAAGTTCAT+TGG | 0.449119 | 8_4:-54185293 | None:intergenic |
| CTATTGTCAGACGCTGGCCT+GGG | 0.450168 | 8_4:+54185078 | Msa1333910:CDS |
| GATGACAAGGTGAGGAGGAA+TGG | 0.454449 | 8_4:-54183928 | None:intergenic |
| AATGAATTCGTTTCTGGTAT+GGG | 0.456759 | 8_4:+54183710 | Msa1333910:exon |
| TGGTTAATGGCATTGTTGGC+AGG | 0.459526 | 8_4:+54183952 | Msa1333910:CDS |
| GGGTCTCACTCAGGTTCATT+GGG | 0.459640 | 8_4:+54188481 | Msa1333910:CDS |
| TTCCTCACGGACAACGATGA+TGG | 0.467217 | 8_4:+54186471 | Msa1333910:CDS |
| CATCAGAATCCTCAATCATT+CGG | 0.469799 | 8_4:-54186512 | None:intergenic |
| ATGACAAGGTGAGGAGGAAT+GGG | 0.470142 | 8_4:-54183927 | None:intergenic |
| ATAAATAATCAACTCAATAG+TGG | 0.475792 | 8_4:-54189036 | None:intergenic |
| TCTTCTCCTCCGAATGATTG+AGG | 0.484935 | 8_4:+54186503 | Msa1333910:CDS |
| CACTATTATCCTCTACTTTG+GGG | 0.486647 | 8_4:-54183890 | None:intergenic |
| GATGCTCTTCTTTCAAGGAA+AGG | 0.488436 | 8_4:-54186405 | None:intergenic |
| TTTCATCGTCGACGATTTGG+AGG | 0.490557 | 8_4:+54183846 | Msa1333910:CDS |
| CATTATGAAGCCAGAATCGC+TGG | 0.492987 | 8_4:+54185263 | Msa1333910:CDS |
| CTACTGACAACAGATATATT+GGG | 0.494392 | 8_4:+54188977 | Msa1333910:three_prime_UTR |
| GAAAACCTACTGGTTGCATT+CGG | 0.496407 | 8_4:+54188759 | Msa1333910:CDS |
| TTTGCAGTCACAATTTCTGC+AGG | 0.496865 | 8_4:-54185204 | None:intergenic |
| AAAGAGATCTTCTGCAACCC+AGG | 0.497559 | 8_4:-54185095 | None:intergenic |
| ATCATGGTTAATGGCATTGT+TGG | 0.501862 | 8_4:+54183948 | Msa1333910:CDS |
| GATGGAGCACCTCATCAATT+CGG | 0.503206 | 8_4:+54187051 | Msa1333910:CDS |
| AAACTGCACATTTAATTGTA+GGG | 0.504974 | 8_4:+54186430 | Msa1333910:CDS |
| CCGAATAATAATGATGATGA+TGG | 0.510234 | 8_4:-54183786 | None:intergenic |
| ACAATTTCTGCAGGTAACTT+CGG | 0.511380 | 8_4:-54185195 | None:intergenic |
| AAGAAACTATTTGCTTGCCA+AGG | 0.515228 | 8_4:-54183580 | None:intergenic |
| TTTGCAATACAAGACATTGC+CGG | 0.524053 | 8_4:-54188832 | None:intergenic |
| ATGAGTGAGAATCCAATCCT+TGG | 0.525945 | 8_4:+54183563 | Msa1333910:five_prime_UTR |
| ACTTGTGTTGAAGATATGGT+TGG | 0.526168 | 8_4:+54187029 | Msa1333910:intron |
| AATCTCAGGTGAAAACCTAC+TGG | 0.526558 | 8_4:+54188749 | Msa1333910:intron |
| ACCAAGATGCGGCGTGGCAA+AGG | 0.535141 | 8_4:-54185309 | None:intergenic |
| TAACTTCCTTATCTAGTCTC+CGG | 0.537427 | 8_4:+54188813 | Msa1333910:exon |
| CACATTGTACACACTGAAGG+TGG | 0.538544 | 8_4:+54187210 | Msa1333910:CDS |
| ACCTACTGGTTGCATTCGGA+TGG | 0.540251 | 8_4:+54188763 | Msa1333910:CDS |
| GATGATAAGGGGTCTCACTC+AGG | 0.541264 | 8_4:+54188472 | Msa1333910:CDS |
| CCAATATATCTGTTGTCAGT+AGG | 0.545616 | 8_4:-54188976 | None:intergenic |
| TTTGTGGCACATTCTTTGGG+AGG | 0.547005 | 8_4:+54185116 | Msa1333910:CDS |
| AAAGCATATATTAACGTTGG+AGG | 0.550261 | 8_4:+54187255 | Msa1333910:CDS |
| AACAAAGCATATATTAACGT+TGG | 0.554028 | 8_4:+54187252 | Msa1333910:CDS |
| TACTGCTCACAGTACAATCC+AGG | 0.559859 | 8_4:+54188544 | Msa1333910:CDS |
| GGGTGAGAGGCTAGCTGAAG+AGG | 0.564032 | 8_4:+54184897 | Msa1333910:CDS |
| TCAGGTTCATTGGGAGCGTG+TGG | 0.573997 | 8_4:+54188490 | Msa1333910:CDS |
| GGCCAGAAAATTGACATGGA+AGG | 0.577554 | 8_4:+54187276 | Msa1333910:CDS |
| TGGTTCAAGAGGACATAGAC+AGG | 0.585186 | 8_4:+54185328 | Msa1333910:CDS |
| ACGCCGCATCTTGGTTCAAG+AGG | 0.588632 | 8_4:+54185317 | Msa1333910:CDS |
| TCAATCATTCGGAGGAGAAG+AGG | 0.590800 | 8_4:-54186501 | None:intergenic |
| CAGAAATTGTGACTGCAAAG+AGG | 0.591218 | 8_4:+54185208 | Msa1333910:CDS |
| GATTCTCACTCATGAACATG+TGG | 0.594881 | 8_4:-54183553 | None:intergenic |
| TTTGTAGAGGAGATGATAAG+GGG | 0.598296 | 8_4:+54188461 | Msa1333910:intron |
| GCAATTACAAGGACTTCTGA+AGG | 0.598403 | 8_4:-54189062 | None:intergenic |
| TTTGAACAACCCCAAAGTAG+AGG | 0.605787 | 8_4:+54183881 | Msa1333910:CDS |
| TTCCATCATCGTTGTCCGTG+AGG | 0.608229 | 8_4:-54186473 | None:intergenic |
| GGAAGTTATCTATCATGTGA+AGG | 0.612715 | 8_4:-54188798 | None:intergenic |
| GTGCGGAGCAGTTTCTCAAG+AGG | 0.613223 | 8_4:+54184096 | Msa1333910:CDS |
| TTTGATGGTGTTGATACTAT+GGG | 0.613394 | 8_4:+54184877 | Msa1333910:CDS |
| TACTATCTATTGTCAGACGC+TGG | 0.614523 | 8_4:+54185072 | Msa1333910:CDS |
| ACATTGCCGGAGACTAGATA+AGG | 0.614588 | 8_4:-54188819 | None:intergenic |
| GCGTCAACATGAACTTCCAA+AGG | 0.625059 | 8_4:+54187073 | Msa1333910:CDS |
| CCTTCAGTGTGTACAATGTG+TGG | 0.626797 | 8_4:-54187207 | None:intergenic |
| ACCATGATGACAAGGTGAGG+AGG | 0.632986 | 8_4:-54183933 | None:intergenic |
| GTGTTGAAGATATGGTTGGA+TGG | 0.633558 | 8_4:+54187033 | Msa1333910:intron |
| CCACACATTGTACACACTGA+AGG | 0.635968 | 8_4:+54187207 | Msa1333910:CDS |
| ATCATTCGGAGGAGAAGAGG+AGG | 0.636999 | 8_4:-54186498 | None:intergenic |
| ACATTGTACACACTGAAGGT+GGG | 0.643420 | 8_4:+54187211 | Msa1333910:CDS |
| ATGTTGACGCCGAATTGATG+AGG | 0.645392 | 8_4:-54187060 | None:intergenic |
| TGCCATTAACCATGATGACA+AGG | 0.651118 | 8_4:-54183941 | None:intergenic |
| TGGAGGCCAGAAAATTGACA+TGG | 0.659078 | 8_4:+54187272 | Msa1333910:CDS |
| ATAATGATGATGATGGCGTA+TGG | 0.660873 | 8_4:-54183779 | None:intergenic |
| CAGAATCCTCAATCATTCGG+AGG | 0.663768 | 8_4:-54186509 | None:intergenic |
| TGTCCTCTTGAACCAAGATG+CGG | 0.666886 | 8_4:-54185320 | None:intergenic |
| CTTCAGTGTGTACAATGTGT+GGG | 0.669488 | 8_4:-54187206 | None:intergenic |
| TTAACCATGATGACAAGGTG+AGG | 0.670354 | 8_4:-54183936 | None:intergenic |
| TGCTGATTGGAGATATGGTG+CGG | 0.674450 | 8_4:+54184079 | Msa1333910:CDS |
| TCTTGAACCAAGATGCGGCG+TGG | 0.680746 | 8_4:-54185315 | None:intergenic |
| ACCATCCGAATGCAACCAGT+AGG | 0.686623 | 8_4:-54188764 | None:intergenic |
| GTGTTGATACTATGGGTGAG+AGG | 0.693331 | 8_4:+54184884 | Msa1333910:CDS |
| GCTTTCAGAAGAGTAAACAG+CGG | 0.740467 | 8_4:+54188519 | Msa1333910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCTAAAATAAATCTTT+AGG | - | chr8_4:54186066-54186085 | None:intergenic | 10.0% |
| !! | TAAATAATCAAAATATACAT+AGG | - | chr8_4:54186278-54186297 | None:intergenic | 10.0% |
| !! | TTTAAATTTATAGTAAGTAA+TGG | + | chr8_4:54187878-54187897 | Msa1333910:intron | 10.0% |
| !!! | TTCTTTTATTTTATTATATC+TGG | + | chr8_4:54188106-54188125 | Msa1333910:intron | 10.0% |
| !!! | ATCTTTTTTTTTTTTAAACT+CGG | - | chr8_4:54188232-54188251 | None:intergenic | 10.0% |
| !!! | TTCTTTTATAATAATTCACA+AGG | - | chr8_4:54184790-54184809 | None:intergenic | 15.0% |
| !!! | GTAATTTTAATGATATATTG+TGG | + | chr8_4:54184821-54184840 | Msa1333910:intron | 15.0% |
| !!! | TCACTTTTTCATTTTATTAA+AGG | + | chr8_4:54186117-54186136 | Msa1333910:intron | 15.0% |
| !!! | CACTTTTTCATTTTATTAAA+GGG | + | chr8_4:54186118-54186137 | Msa1333910:intron | 15.0% |
| !!! | ATTTGAAATTATACAAACAA+CGG | + | chr8_4:54186157-54186176 | Msa1333910:intron | 15.0% |
| !! | CATTAACAATTTAATTGAAT+TGG | - | chr8_4:54186607-54186626 | None:intergenic | 15.0% |
| !! | GAAAAAAATATATGAAGTAT+AGG | + | chr8_4:54187515-54187534 | Msa1333910:intron | 15.0% |
| !! | TTTAGAAACATATTATATGA+AGG | - | chr8_4:54187594-54187613 | None:intergenic | 15.0% |
| !! | CTATAAATTTAAATAACAGT+AGG | - | chr8_4:54187871-54187890 | None:intergenic | 15.0% |
| !!! | TGTAATTTAAATTGCAATTT+TGG | + | chr8_4:54188027-54188046 | Msa1333910:intron | 15.0% |
| !!! | GTAATTTAAATTGCAATTTT+GGG | + | chr8_4:54188028-54188047 | Msa1333910:intron | 15.0% |
| !! | AAAAAAAAGATTTAACAACT+TGG | + | chr8_4:54188241-54188260 | Msa1333910:intron | 15.0% |
| !!! | TTTGTTTACTTTTAATTATC+TGG | - | chr8_4:54188294-54188313 | None:intergenic | 15.0% |
| !!! | ACTAATTCATCATATTTTGT+GGG | - | chr8_4:54184298-54184317 | None:intergenic | 20.0% |
| !! | AAGTGTAAACAATATTATTG+TGG | + | chr8_4:54184636-54184655 | Msa1333910:intron | 20.0% |
| !!! | ATTGTGGATTTTCATATAAA+TGG | + | chr8_4:54184652-54184671 | Msa1333910:intron | 20.0% |
| !! | AATGTGAATGAATTATCATA+AGG | - | chr8_4:54185013-54185032 | None:intergenic | 20.0% |
| !!! | ACATGAATTAAGTTTAAAAC+TGG | - | chr8_4:54185043-54185062 | None:intergenic | 20.0% |
| !! | AACTTAATTCATGTTTATCT+AGG | + | chr8_4:54185049-54185068 | Msa1333910:intron | 20.0% |
| !!! | TAAAACATTTTACTTCAAGT+TGG | - | chr8_4:54185531-54185550 | None:intergenic | 20.0% |
| !! | AGAGAAAATCATAAATCATA+GGG | + | chr8_4:54185673-54185692 | Msa1333910:intron | 20.0% |
| !! | GTTGTTTGTATAATTTCAAA+TGG | - | chr8_4:54186158-54186177 | None:intergenic | 20.0% |
| !! | TATAACAAACTTAAATGACT+CGG | - | chr8_4:54186561-54186580 | None:intergenic | 20.0% |
| !! | ATATTGAAATTGTCTTAACT+GGG | + | chr8_4:54186847-54186866 | Msa1333910:intron | 20.0% |
| !! | TACATCATTGTAACAATATA+TGG | - | chr8_4:54186960-54186979 | None:intergenic | 20.0% |
| !! | AGGTTAATTATTTCAAAGTT+AGG | - | chr8_4:54187963-54187982 | None:intergenic | 20.0% |
| !! | CTATATGTTAAAATTTGGTA+GGG | - | chr8_4:54188176-54188195 | None:intergenic | 20.0% |
| !! | TTCGATAATTATTAATCTAC+TGG | + | chr8_4:54188320-54188339 | Msa1333910:intron | 20.0% |
| !! | TATAAGATAAAAACTTTACC+TGG | - | chr8_4:54188565-54188584 | None:intergenic | 20.0% |
| !! | AACAGACAAATAAAATATCA+CGG | - | chr8_4:54188726-54188745 | None:intergenic | 20.0% |
| !! | ATAAATAATCAACTCAATAG+TGG | - | chr8_4:54189039-54189058 | None:intergenic | 20.0% |
| ! | CAACTGAAAAAACAAAACAA+AGG | + | chr8_4:54183687-54183706 | Msa1333910:five_prime_UTR | 25.0% |
| ! | CCATCATCATCATTATTATT+CGG | + | chr8_4:54183786-54183805 | Msa1333910:CDS | 25.0% |
| !! | TATCTACAGAGATTTTCTTA+CGG | - | chr8_4:54184145-54184164 | None:intergenic | 25.0% |
| ! | CATTGTATATGTAATTCACA+CGG | + | chr8_4:54184170-54184189 | Msa1333910:intron | 25.0% |
| !! | GACTAATTCATCATATTTTG+TGG | - | chr8_4:54184299-54184318 | None:intergenic | 25.0% |
| !! | AGTTTTGCATATATGGATTT+AGG | + | chr8_4:54184393-54184412 | Msa1333910:intron | 25.0% |
| ! | CTTTGTATGTATCTAATTGT+TGG | + | chr8_4:54184480-54184499 | Msa1333910:intron | 25.0% |
| ! | GTCAAATTATGGTATAACAA+GGG | - | chr8_4:54184569-54184588 | None:intergenic | 25.0% |
| ! | TGTCAAATTATGGTATAACA+AGG | - | chr8_4:54184570-54184589 | None:intergenic | 25.0% |
| ! | CAAAATCATCTGTCAAATTA+TGG | - | chr8_4:54184580-54184599 | None:intergenic | 25.0% |
| !! | TTGAAAATAGCTTCTCATTT+TGG | + | chr8_4:54184682-54184701 | Msa1333910:intron | 25.0% |
| ! | TTTAATGATATATTGTGGAC+AGG | + | chr8_4:54184826-54184845 | Msa1333910:intron | 25.0% |
| ! | TCTTCAAAATTGACATTTGA+TGG | + | chr8_4:54184862-54184881 | Msa1333910:CDS | 25.0% |
| !! | CCAAAGTAATTTAAAGTTCA+GGG | - | chr8_4:54184966-54184985 | None:intergenic | 25.0% |
| !! | TCCAAAGTAATTTAAAGTTC+AGG | - | chr8_4:54184967-54184986 | None:intergenic | 25.0% |
| ! | ACTAATAACACAAATCTCTA+AGG | - | chr8_4:54185647-54185666 | None:intergenic | 25.0% |
| !! | AGATTTGTGTTATTAGTATG+AGG | + | chr8_4:54185650-54185669 | Msa1333910:intron | 25.0% |
| ! | GAGAGAAAATCATAAATCAT+AGG | + | chr8_4:54185672-54185691 | Msa1333910:intron | 25.0% |
| !!! | ATATTAAGTGGTTTTTGAGA+AGG | - | chr8_4:54185799-54185818 | None:intergenic | 25.0% |
| ! | AATTACTAATCTTCAGTTGA+TGG | - | chr8_4:54185846-54185865 | None:intergenic | 25.0% |
| !!! | TTATTTAATTTGTAGCAGCT+TGG | + | chr8_4:54186291-54186310 | Msa1333910:intron | 25.0% |
| !!! | TATTTAATTTGTAGCAGCTT+GGG | + | chr8_4:54186292-54186311 | Msa1333910:intron | 25.0% |
| !! | ATTTATGCTCCTTAATTTTC+CGG | + | chr8_4:54186352-54186371 | Msa1333910:intron | 25.0% |
| ! | AAACTGCACATTTAATTGTA+GGG | + | chr8_4:54186430-54186449 | Msa1333910:CDS | 25.0% |
| ! | TAAATTGTTAATGATTGTGC+AGG | + | chr8_4:54186614-54186633 | Msa1333910:intron | 25.0% |
| ! | AAGACATCTAATTTGAAAAG+AGG | - | chr8_4:54186699-54186718 | None:intergenic | 25.0% |
| !! | TGATAATGATATAGTGTCAA+TGG | + | chr8_4:54186758-54186777 | Msa1333910:intron | 25.0% |
| ! | GATATTGAAATTGTCTTAAC+TGG | + | chr8_4:54186846-54186865 | Msa1333910:intron | 25.0% |
| ! | TATTGAAATTGTCTTAACTG+GGG | + | chr8_4:54186848-54186867 | Msa1333910:intron | 25.0% |
| !! | CTCAATCTTAATGTTTTACA+TGG | + | chr8_4:54187115-54187134 | Msa1333910:intron | 25.0% |
| ! | AACGTTAATATATGCTTTGT+TGG | - | chr8_4:54187253-54187272 | None:intergenic | 25.0% |
| ! | AACAAAGCATATATTAACGT+TGG | + | chr8_4:54187252-54187271 | Msa1333910:CDS | 25.0% |
| !!! | AGACAGTTTTTATTTCTTAC+AGG | - | chr8_4:54187315-54187334 | None:intergenic | 25.0% |
| ! | ATATTATATGAAGGTCCAAA+CGG | - | chr8_4:54187585-54187604 | None:intergenic | 25.0% |
| !!! | GATACTTTTTTGTAGAGAAA+AGG | + | chr8_4:54187701-54187720 | Msa1333910:intron | 25.0% |
| !!! | AAAGGATATTTTGATAACTG+TGG | + | chr8_4:54187719-54187738 | Msa1333910:intron | 25.0% |
| !!! | CTAGGAAAATTTGTTTTTCT+TGG | + | chr8_4:54187822-54187841 | Msa1333910:intron | 25.0% |
| !!! | TGTATGATTTTAGTTTCTGA+TGG | + | chr8_4:54187921-54187940 | Msa1333910:intron | 25.0% |
| ! | GCTATATGTTAAAATTTGGT+AGG | - | chr8_4:54188177-54188196 | None:intergenic | 25.0% |
| ! | AGTGGCTATATGTTAAAATT+TGG | - | chr8_4:54188181-54188200 | None:intergenic | 25.0% |
| !!! | AATTTTAACATATAGCCACT+TGG | + | chr8_4:54188181-54188200 | Msa1333910:intron | 25.0% |
| !! | GTTTTTATCTTATAGCTTTC+CGG | + | chr8_4:54188571-54188590 | Msa1333910:intron | 25.0% |
| !!! | TACAGTATTTTTGTATGTCT+TGG | + | chr8_4:54188858-54188877 | Msa1333910:three_prime_UTR | 25.0% |
| ! | CAATATATAGTGTGAACATA+TGG | - | chr8_4:54188943-54188962 | None:intergenic | 25.0% |
| !! | AATGAATTCGTTTCTGGTAT+GGG | + | chr8_4:54183710-54183729 | Msa1333910:exon | 30.0% |
| ! | CCGAATAATAATGATGATGA+TGG | - | chr8_4:54183789-54183808 | None:intergenic | 30.0% |
| CAATATGATTATGAGAGTGA+AGG | - | chr8_4:54183990-54184009 | None:intergenic | 30.0% | |
| AAACTACAACCAAATGCATT+TGG | + | chr8_4:54184044-54184063 | Msa1333910:intron | 30.0% | |
| CTGAAAATTCCAAATGCATT+TGG | - | chr8_4:54184056-54184075 | None:intergenic | 30.0% | |
| ! | ATATTTTGTGGGACCTAAAT+AGG | - | chr8_4:54184287-54184306 | None:intergenic | 30.0% |
| ! | GAGCTAAAGTTTTGCATATA+TGG | + | chr8_4:54184386-54184405 | Msa1333910:intron | 30.0% |
| ! | TGGATTTAGGATAACTAATC+CGG | + | chr8_4:54184406-54184425 | Msa1333910:intron | 30.0% |
| TTATTGATGCTCAAGTATGA+AGG | + | chr8_4:54184434-54184453 | Msa1333910:intron | 30.0% | |
| AAAAAACTCGTGAATTGACT+TGG | + | chr8_4:54184509-54184528 | Msa1333910:intron | 30.0% | |
| CAAATATAAGTGACAGTAAC+AGG | + | chr8_4:54184718-54184737 | Msa1333910:intron | 30.0% | |
| !! | ATTTGATGGTGTTGATACTA+TGG | + | chr8_4:54184876-54184895 | Msa1333910:CDS | 30.0% |
| !! | TTTGATGGTGTTGATACTAT+GGG | + | chr8_4:54184877-54184896 | Msa1333910:CDS | 30.0% |
| ! | TAGTTGCAATTTGATCCTTT+TGG | + | chr8_4:54184928-54184947 | Msa1333910:intron | 30.0% |
| CCCTGAACTTTAAATTACTT+TGG | + | chr8_4:54184963-54184982 | Msa1333910:intron | 30.0% | |
| ! | TTTGGAGTAATCAAAAAGTC+TGG | - | chr8_4:54185165-54185184 | None:intergenic | 30.0% |
| GCAAAGGTTATAAAGTTCAT+TGG | - | chr8_4:54185296-54185315 | None:intergenic | 30.0% | |
| AGCTTAAAATTGCATACAAG+AGG | + | chr8_4:54185567-54185586 | Msa1333910:intron | 30.0% | |
| ! | ACAAATCTCTAAGGAAACAA+GGG | - | chr8_4:54185638-54185657 | None:intergenic | 30.0% |
| AAAATCATAAATCATAGGGC+TGG | + | chr8_4:54185677-54185696 | Msa1333910:intron | 30.0% | |
| GTATCAAAGTTTAATTGCGA+AGG | - | chr8_4:54185738-54185757 | None:intergenic | 30.0% | |
| ATGGATCATGTCATATTAAG+TGG | - | chr8_4:54185811-54185830 | None:intergenic | 30.0% | |
| TTTGGCAACGAAAACAATTT+AGG | - | chr8_4:54185939-54185958 | None:intergenic | 30.0% | |
| GATATCTGGCAAAATTCATT+TGG | - | chr8_4:54185957-54185976 | None:intergenic | 30.0% | |
| ! | ATTTTGCCAGATATCTTCAT+AGG | + | chr8_4:54185962-54185981 | Msa1333910:intron | 30.0% |
| ! | TTTGTTGTACGAGCTAAAAA+TGG | + | chr8_4:54186192-54186211 | Msa1333910:intron | 30.0% |
| !! | ATTTAATTTGTAGCAGCTTG+GGG | + | chr8_4:54186293-54186312 | Msa1333910:intron | 30.0% |
| ! | TAAGGAGCATAAATAAGAGA+CGG | - | chr8_4:54186346-54186365 | None:intergenic | 30.0% |
| CAAACTGCACATTTAATTGT+AGG | + | chr8_4:54186429-54186448 | Msa1333910:CDS | 30.0% | |
| CAAATTGTACTGAAGCTTAA+TGG | + | chr8_4:54186734-54186753 | Msa1333910:intron | 30.0% | |
| AAGAAAATAATTAGCTCGTG+TGG | - | chr8_4:54186933-54186952 | None:intergenic | 30.0% | |
| ATTAGACTAGCAGAAAAGAA+AGG | - | chr8_4:54187163-54187182 | None:intergenic | 30.0% | |
| AAAGCATATATTAACGTTGG+AGG | + | chr8_4:54187255-54187274 | Msa1333910:CDS | 30.0% | |
| !!! | TGTAAACCTTTTTTTGTCTC+TGG | + | chr8_4:54187344-54187363 | Msa1333910:intron | 30.0% |
| CAAATACCAGAGACAAAAAA+AGG | - | chr8_4:54187353-54187372 | None:intergenic | 30.0% | |
| TGGTATTTGTGAAAGAAGTA+TGG | + | chr8_4:54187364-54187383 | Msa1333910:intron | 30.0% | |
| CAAGAAGTTTACTTAAGATG+AGG | + | chr8_4:54187388-54187407 | Msa1333910:intron | 30.0% | |
| !!! | TCAGGTTTTATTTTGCTTTC+AGG | + | chr8_4:54187422-54187441 | Msa1333910:intron | 30.0% |
| TTTATCTTGCTGAATGTTCT+TGG | - | chr8_4:54187491-54187510 | None:intergenic | 30.0% | |
| AGCAAAGTAAAAAAGAGGAA+AGG | - | chr8_4:54187548-54187567 | None:intergenic | 30.0% | |
| TGAAGAGCAAAGTAAAAAAG+AGG | - | chr8_4:54187553-54187572 | None:intergenic | 30.0% | |
| TCTTCATGTTTATAACCGTT+TGG | + | chr8_4:54187567-54187586 | Msa1333910:intron | 30.0% | |
| ATGAAATTTCCATTGAACCT+TGG | + | chr8_4:54187767-54187786 | Msa1333910:intron | 30.0% | |
| TGAAATTTCCATTGAACCTT+GGG | + | chr8_4:54187768-54187787 | Msa1333910:intron | 30.0% | |
| GTATAGTATGTTCTTCTTGT+AGG | + | chr8_4:54187797-54187816 | Msa1333910:intron | 30.0% | |
| AATAACAGTAGGAGATCATT+CGG | - | chr8_4:54187860-54187879 | None:intergenic | 30.0% | |
| AGCTATAAACTTCCAAAGAA+AGG | - | chr8_4:54187993-54188012 | None:intergenic | 30.0% | |
| TTTGGAAGTTTATAGCTTAC+TGG | + | chr8_4:54187996-54188015 | Msa1333910:intron | 30.0% | |
| !!! | AAATTGCAATTTTGGGTTTC+TGG | + | chr8_4:54188035-54188054 | Msa1333910:intron | 30.0% |
| ! | AGATTTTACAAATCAGTCCA+TGG | - | chr8_4:54188079-54188098 | None:intergenic | 30.0% |
| AGACTAGAAATTGTATGCTA+GGG | - | chr8_4:54188378-54188397 | None:intergenic | 30.0% | |
| AAGACTAGAAATTGTATGCT+AGG | - | chr8_4:54188379-54188398 | None:intergenic | 30.0% | |
| !! | AAGACATATGCTTTTTGTAG+AGG | + | chr8_4:54188448-54188467 | Msa1333910:intron | 30.0% |
| ! | TTTTTGTAGAGGAGATGATA+AGG | + | chr8_4:54188459-54188478 | Msa1333910:intron | 30.0% |
| ! | TTTTGTAGAGGAGATGATAA+GGG | + | chr8_4:54188460-54188479 | Msa1333910:intron | 30.0% |
| ATTTGTCTGTTGTTAATCTC+AGG | + | chr8_4:54188735-54188754 | Msa1333910:intron | 30.0% | |
| CTACTGACAACAGATATATT+GGG | + | chr8_4:54188977-54188996 | Msa1333910:three_prime_UTR | 30.0% | |
| AAGAAACTATTTGCTTGCCA+AGG | - | chr8_4:54183583-54183602 | None:intergenic | 35.0% | |
| AGAAAAAGAGAAAGCAGAGT+TGG | + | chr8_4:54183626-54183645 | Msa1333910:intron | 35.0% | |
| CAAAGGAATGAATTCGTTTC+TGG | + | chr8_4:54183704-54183723 | Msa1333910:exon | 35.0% | |
| !! | GAATGAATTCGTTTCTGGTA+TGG | + | chr8_4:54183709-54183728 | Msa1333910:exon | 35.0% |
| !! | ATAATGATGATGATGGCGTA+TGG | - | chr8_4:54183782-54183801 | None:intergenic | 35.0% |
| AAATTTCATCGTCGACGATT+TGG | + | chr8_4:54183843-54183862 | Msa1333910:CDS | 35.0% | |
| CACTATTATCCTCTACTTTG+GGG | - | chr8_4:54183893-54183912 | None:intergenic | 35.0% | |
| GCACTATTATCCTCTACTTT+GGG | - | chr8_4:54183894-54183913 | None:intergenic | 35.0% | |
| AGCACTATTATCCTCTACTT+TGG | - | chr8_4:54183895-54183914 | None:intergenic | 35.0% | |
| ATCATGGTTAATGGCATTGT+TGG | + | chr8_4:54183948-54183967 | Msa1333910:CDS | 35.0% | |
| TATGATTATGAGAGTGAAGG+TGG | - | chr8_4:54183987-54184006 | None:intergenic | 35.0% | |
| ! | GAATTTTCAGTTCTGCTGAT+TGG | + | chr8_4:54184066-54184085 | Msa1333910:intron | 35.0% |
| TTGAGCATCAATAAACTGAC+CGG | - | chr8_4:54184428-54184447 | None:intergenic | 35.0% | |
| !! | TAGCTTCTCATTTTGGTGAA+CGG | + | chr8_4:54184689-54184708 | Msa1333910:intron | 35.0% |
| ! | TCTTTTGTGGCACATTCTTT+GGG | + | chr8_4:54185113-54185132 | Msa1333910:CDS | 35.0% |
| ! | AACTTCGGCTTCTAATGTTT+TGG | - | chr8_4:54185183-54185202 | None:intergenic | 35.0% |
| ACAATTTCTGCAGGTAACTT+CGG | - | chr8_4:54185198-54185217 | None:intergenic | 35.0% | |
| AAGAAAAAATAGCAGATGCC+AGG | - | chr8_4:54185432-54185451 | None:intergenic | 35.0% | |
| !! | AGTCATCTGTGCTTTTTGAT+TGG | + | chr8_4:54185486-54185505 | Msa1333910:intron | 35.0% |
| ! | CACAAATCTCTAAGGAAACA+AGG | - | chr8_4:54185639-54185658 | None:intergenic | 35.0% |
| TTGATACGAAAGTTACAGAC+CGG | + | chr8_4:54185751-54185770 | Msa1333910:intron | 35.0% | |
| !! | TTGATGGTTCTGGAATCATA+TGG | - | chr8_4:54185830-54185849 | None:intergenic | 35.0% |
| !! | TAATCTTCAGTTGATGGTTC+TGG | - | chr8_4:54185840-54185859 | None:intergenic | 35.0% |
| TTCCATCATAGTCAAGCTAT+TGG | + | chr8_4:54186243-54186262 | Msa1333910:intron | 35.0% | |
| TCCATCATAGTCAAGCTATT+GGG | + | chr8_4:54186244-54186263 | Msa1333910:intron | 35.0% | |
| CTACAAGAACCGGAAAATTA+AGG | - | chr8_4:54186364-54186383 | None:intergenic | 35.0% | |
| TTGTAGCTTCCATTTCTTTG+TGG | + | chr8_4:54186378-54186397 | Msa1333910:intron | 35.0% | |
| AAAGGAATGCCACAAAGAAA+TGG | - | chr8_4:54186390-54186409 | None:intergenic | 35.0% | |
| ! | TTTGAGATGCTCTTCTTTCA+AGG | - | chr8_4:54186413-54186432 | None:intergenic | 35.0% |
| CATTTAATTGTAGGGAGAAC+TGG | + | chr8_4:54186438-54186457 | Msa1333910:CDS | 35.0% | |
| ! | TGGTAAACATCTTTTCCTCA+CGG | + | chr8_4:54186458-54186477 | Msa1333910:CDS | 35.0% |
| CATCAGAATCCTCAATCATT+CGG | - | chr8_4:54186515-54186534 | None:intergenic | 35.0% | |
| GTGTATTATGAAGTGCATCT+CGG | + | chr8_4:54186813-54186832 | Msa1333910:intron | 35.0% | |
| !! | CTTGACTTGTGTTGAAGATA+TGG | + | chr8_4:54187025-54187044 | Msa1333910:intron | 35.0% |
| ACTTGTGTTGAAGATATGGT+TGG | + | chr8_4:54187029-54187048 | Msa1333910:intron | 35.0% | |
| CATCAGAAAGTCTTTACCTT+TGG | - | chr8_4:54187092-54187111 | None:intergenic | 35.0% | |
| ! | AACCTTCCATGTCAATTTTC+TGG | - | chr8_4:54187281-54187300 | None:intergenic | 35.0% |
| ! | GATGAGGAAATTTTCATCTC+AGG | + | chr8_4:54187404-54187423 | Msa1333910:intron | 35.0% |
| ! | AGGATAGTCGTGCATATTTT+TGG | + | chr8_4:54187442-54187461 | Msa1333910:intron | 35.0% |
| !!! | TAGTCGTGCATATTTTTGGT+AGG | + | chr8_4:54187446-54187465 | Msa1333910:intron | 35.0% |
| TAGGGTAGTCAAATTCAGAT+TGG | - | chr8_4:54188158-54188177 | None:intergenic | 35.0% | |
| !! | ATATAGCCACTTGGATTAGT+CGG | + | chr8_4:54188190-54188209 | Msa1333910:intron | 35.0% |
| TTTGTAGAGGAGATGATAAG+GGG | + | chr8_4:54188461-54188480 | Msa1333910:intron | 35.0% | |
| ! | ATAGCATCAACAAGTTTTGC+CGG | - | chr8_4:54188593-54188612 | None:intergenic | 35.0% |
| !! | TAAATCCAGCTCTAGATGAA+AGG | + | chr8_4:54188627-54188646 | Msa1333910:intron | 35.0% |
| !! | AAATCCAGCTCTAGATGAAA+GGG | + | chr8_4:54188628-54188647 | Msa1333910:intron | 35.0% |
| GGAAGTTATCTATCATGTGA+AGG | - | chr8_4:54188801-54188820 | None:intergenic | 35.0% | |
| TAACTTCCTTATCTAGTCTC+CGG | + | chr8_4:54188813-54188832 | Msa1333910:exon | 35.0% | |
| TTTGCAATACAAGACATTGC+CGG | - | chr8_4:54188835-54188854 | None:intergenic | 35.0% | |
| ! | GTGTGAACATATGGACTATT+AGG | - | chr8_4:54188934-54188953 | None:intergenic | 35.0% |
| CCAATATATCTGTTGTCAGT+AGG | - | chr8_4:54188979-54188998 | None:intergenic | 35.0% | |
| CCTACTGACAACAGATATAT+TGG | + | chr8_4:54188976-54188995 | Msa1333910:three_prime_UTR | 35.0% | |
| GATTCTCACTCATGAACATG+TGG | - | chr8_4:54183556-54183575 | None:intergenic | 40.0% | |
| ATGAGTGAGAATCCAATCCT+TGG | + | chr8_4:54183563-54183582 | Msa1333910:five_prime_UTR | 40.0% | |
| ACTATTTGCTTGCCAAGGAT+TGG | - | chr8_4:54183578-54183597 | None:intergenic | 40.0% | |
| !! | GATCTCTTCTCATCGCTTTT+TGG | + | chr8_4:54183808-54183827 | Msa1333910:CDS | 40.0% |
| TTTGAACAACCCCAAAGTAG+AGG | + | chr8_4:54183881-54183900 | Msa1333910:CDS | 40.0% | |
| TTAACCATGATGACAAGGTG+AGG | - | chr8_4:54183939-54183958 | None:intergenic | 40.0% | |
| CACCTTGTCATCATGGTTAA+TGG | + | chr8_4:54183939-54183958 | Msa1333910:CDS | 40.0% | |
| TGCCATTAACCATGATGACA+AGG | - | chr8_4:54183944-54183963 | None:intergenic | 40.0% | |
| ! | AGTTCTGCTGATTGGAGATA+TGG | + | chr8_4:54184074-54184093 | Msa1333910:intron | 40.0% |
| ! | CTACAGAGATTTTCTTACGG+TGG | - | chr8_4:54184142-54184161 | None:intergenic | 40.0% |
| ! | TTCAAGTTCAAACCCAAGCT+TGG | + | chr8_4:54184222-54184241 | Msa1333910:intron | 40.0% |
| ! | AGAGATTTTGCCGCCTATTT+AGG | + | chr8_4:54184271-54184290 | Msa1333910:intron | 40.0% |
| ! | TTTTGTGGGACCTAAATAGG+CGG | - | chr8_4:54184284-54184303 | None:intergenic | 40.0% |
| !! | TCGTGAATTGACTTGGTTTG+AGG | + | chr8_4:54184516-54184535 | Msa1333910:intron | 40.0% |
| !! | CGTGAATTGACTTGGTTTGA+GGG | + | chr8_4:54184517-54184536 | Msa1333910:intron | 40.0% |
| !!! | GTTTGAGGGTGTAGTTTTGA+CGG | + | chr8_4:54184531-54184550 | Msa1333910:intron | 40.0% |
| ! | GGGAAGTATAAGAGACCAAA+AGG | - | chr8_4:54184946-54184965 | None:intergenic | 40.0% |
| TACTATCTATTGTCAGACGC+TGG | + | chr8_4:54185072-54185091 | Msa1333910:CDS | 40.0% | |
| ! | GTTGCAGAAGATCTCTTTTG+TGG | + | chr8_4:54185100-54185119 | Msa1333910:CDS | 40.0% |
| ! | CTCTTTTGTGGCACATTCTT+TGG | + | chr8_4:54185112-54185131 | Msa1333910:CDS | 40.0% |
| TTTGCAGTCACAATTTCTGC+AGG | - | chr8_4:54185207-54185226 | None:intergenic | 40.0% | |
| CAGAAATTGTGACTGCAAAG+AGG | + | chr8_4:54185208-54185227 | Msa1333910:CDS | 40.0% | |
| TGTATCACGTTTCAGCATCA+TGG | + | chr8_4:54185378-54185397 | Msa1333910:intron | 40.0% | |
| !!! | CACCTACCTTTATTTTTGCC+TGG | + | chr8_4:54185411-54185430 | Msa1333910:intron | 40.0% |
| TGCCAGGCAAAAATAAAGGT+AGG | - | chr8_4:54185416-54185435 | None:intergenic | 40.0% | |
| CAGATGCCAGGCAAAAATAA+AGG | - | chr8_4:54185420-54185439 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGATGACTGTGA+TGG | - | chr8_4:54185482-54185501 | None:intergenic | 40.0% |
| !! | AAGTTACAGACCGGTTTTCA+TGG | + | chr8_4:54185760-54185779 | Msa1333910:intron | 40.0% |
| TCCCAATAGCTTGACTATGA+TGG | - | chr8_4:54186248-54186267 | None:intergenic | 40.0% | |
| CATAGTCAAGCTATTGGGAT+AGG | + | chr8_4:54186249-54186268 | Msa1333910:intron | 40.0% | |
| ACTTAAGTGTGTGTGCATAC+TGG | + | chr8_4:54186316-54186335 | Msa1333910:intron | 40.0% | |
| GAAATGGAAGCTACAAGAAC+CGG | - | chr8_4:54186374-54186393 | None:intergenic | 40.0% | |
| GATGCTCTTCTTTCAAGGAA+AGG | - | chr8_4:54186408-54186427 | None:intergenic | 40.0% | |
| GTGTTGAAGATATGGTTGGA+TGG | + | chr8_4:54187033-54187052 | Msa1333910:intron | 40.0% | |
| CTTCAGTGTGTACAATGTGT+GGG | - | chr8_4:54187209-54187228 | None:intergenic | 40.0% | |
| ACATTGTACACACTGAAGGT+GGG | + | chr8_4:54187211-54187230 | Msa1333910:CDS | 40.0% | |
| AATTTCCATTGAACCTTGGG+TGG | + | chr8_4:54187771-54187790 | Msa1333910:intron | 40.0% | |
| ATGTTCTTCTTGTAGGAGCT+AGG | + | chr8_4:54187804-54187823 | Msa1333910:intron | 40.0% | |
| AAACTTCCAAAGAAAGGCAG+AGG | - | chr8_4:54187987-54188006 | None:intergenic | 40.0% | |
| ! | TGATGAACTGATTCTTGCCA+TGG | + | chr8_4:54188059-54188078 | Msa1333910:intron | 40.0% |
| GCTTTCAGAAGAGTAAACAG+CGG | + | chr8_4:54188519-54188538 | Msa1333910:CDS | 40.0% | |
| GGAACATCTAGCTGAAATTG+TGG | - | chr8_4:54188705-54188724 | None:intergenic | 40.0% | |
| AATCTCAGGTGAAAACCTAC+TGG | + | chr8_4:54188749-54188768 | Msa1333910:intron | 40.0% | |
| ! | GAAAACCTACTGGTTGCATT+CGG | + | chr8_4:54188759-54188778 | Msa1333910:CDS | 40.0% |
| ! | GGGTTAATTGTTTCTTGCAC+TGG | + | chr8_4:54188997-54189016 | Msa1333910:three_prime_UTR | 40.0% |
| GCAATTACAAGGACTTCTGA+AGG | - | chr8_4:54189065-54189084 | None:intergenic | 40.0% | |
| ! | TTTCATCGTCGACGATTTGG+AGG | + | chr8_4:54183846-54183865 | Msa1333910:CDS | 45.0% |
| ATGACAAGGTGAGGAGGAAT+GGG | - | chr8_4:54183930-54183949 | None:intergenic | 45.0% | |
| TGGTTAATGGCATTGTTGGC+AGG | + | chr8_4:54183952-54183971 | Msa1333910:CDS | 45.0% | |
| ! | TGCTGATTGGAGATATGGTG+CGG | + | chr8_4:54184079-54184098 | Msa1333910:CDS | 45.0% |
| !! | GCTCTCTTCTAGCTTAACCA+AGG | + | chr8_4:54184192-54184211 | Msa1333910:intron | 45.0% |
| ! | TCTAGCTTAACCAAGGTCAC+TGG | + | chr8_4:54184199-54184218 | Msa1333910:intron | 45.0% |
| TGAACTTGAACCAGTGACCT+TGG | - | chr8_4:54184212-54184231 | None:intergenic | 45.0% | |
| ! | GTGTTGATACTATGGGTGAG+AGG | + | chr8_4:54184884-54184903 | Msa1333910:CDS | 45.0% |
| !!! | GGCTAGCTGAAGAGGTATTT+TGG | + | chr8_4:54184905-54184924 | Msa1333910:intron | 45.0% |
| AAAGAGATCTTCTGCAACCC+AGG | - | chr8_4:54185098-54185117 | None:intergenic | 45.0% | |
| TTTGTGGCACATTCTTTGGG+AGG | + | chr8_4:54185116-54185135 | Msa1333910:CDS | 45.0% | |
| CATTATGAAGCCAGAATCGC+TGG | + | chr8_4:54185263-54185282 | Msa1333910:CDS | 45.0% | |
| TGTCCTCTTGAACCAAGATG+CGG | - | chr8_4:54185323-54185342 | None:intergenic | 45.0% | |
| TGGTTCAAGAGGACATAGAC+AGG | + | chr8_4:54185328-54185347 | Msa1333910:CDS | 45.0% | |
| ATGTTCCGTGCCATGAAAAC+CGG | - | chr8_4:54185773-54185792 | None:intergenic | 45.0% | |
| GGATGGCCTATGAAGATATC+TGG | - | chr8_4:54185971-54185990 | None:intergenic | 45.0% | |
| TCAAATGTCCATACCTGCAC+AGG | - | chr8_4:54185992-54186011 | None:intergenic | 45.0% | |
| TCAATCATTCGGAGGAGAAG+AGG | - | chr8_4:54186504-54186523 | None:intergenic | 45.0% | |
| TCTTCTCCTCCGAATGATTG+AGG | + | chr8_4:54186503-54186522 | Msa1333910:CDS | 45.0% | |
| CAGAATCCTCAATCATTCGG+AGG | - | chr8_4:54186512-54186531 | None:intergenic | 45.0% | |
| !! | GCATGTGCTGACTTTGACAT+GGG | - | chr8_4:54186784-54186803 | None:intergenic | 45.0% |
| !! | TGCATGTGCTGACTTTGACA+TGG | - | chr8_4:54186785-54186804 | None:intergenic | 45.0% |
| ATAATTAGCTCGTGTGGCAG+AGG | - | chr8_4:54186927-54186946 | None:intergenic | 45.0% | |
| ! | GATGGAGCACCTCATCAATT+CGG | + | chr8_4:54187051-54187070 | Msa1333910:CDS | 45.0% |
| ATGTTGACGCCGAATTGATG+AGG | - | chr8_4:54187063-54187082 | None:intergenic | 45.0% | |
| GCGTCAACATGAACTTCCAA+AGG | + | chr8_4:54187073-54187092 | Msa1333910:CDS | 45.0% | |
| CCTTCAGTGTGTACAATGTG+TGG | - | chr8_4:54187210-54187229 | None:intergenic | 45.0% | |
| CCACACATTGTACACACTGA+AGG | + | chr8_4:54187207-54187226 | Msa1333910:CDS | 45.0% | |
| CACATTGTACACACTGAAGG+TGG | + | chr8_4:54187210-54187229 | Msa1333910:CDS | 45.0% | |
| TGGAGGCCAGAAAATTGACA+TGG | + | chr8_4:54187272-54187291 | Msa1333910:CDS | 45.0% | |
| GGCCAGAAAATTGACATGGA+AGG | + | chr8_4:54187276-54187295 | Msa1333910:CDS | 45.0% | |
| CATACTATACCAACCACCCA+AGG | - | chr8_4:54187787-54187806 | None:intergenic | 45.0% | |
| AACCTACCTCTGCCTTTCTT+TGG | + | chr8_4:54187978-54187997 | Msa1333910:intron | 45.0% | |
| TTCCAAAGAAAGGCAGAGGT+AGG | - | chr8_4:54187983-54188002 | None:intergenic | 45.0% | |
| !! | ACTTGGATTAGTCGGTCCTT+GGG | + | chr8_4:54188198-54188217 | Msa1333910:intron | 45.0% |
| AAACTCGGTATCATGACCCA+AGG | - | chr8_4:54188217-54188236 | None:intergenic | 45.0% | |
| ! | AATGCCCTTTCATCTAGAGC+TGG | - | chr8_4:54188635-54188654 | None:intergenic | 45.0% |
| ACATTGCCGGAGACTAGATA+AGG | - | chr8_4:54188822-54188841 | None:intergenic | 45.0% | |
| GATGACAAGGTGAGGAGGAA+TGG | - | chr8_4:54183931-54183950 | None:intergenic | 50.0% | |
| TCCTCCTCACCTTGTCATCA+TGG | + | chr8_4:54183932-54183951 | Msa1333910:CDS | 50.0% | |
| ACCATGATGACAAGGTGAGG+AGG | - | chr8_4:54183936-54183955 | None:intergenic | 50.0% | |
| CGGTGGACGATGACTTTATC+TGG | - | chr8_4:54184125-54184144 | None:intergenic | 50.0% | |
| ! | ACATTCTTTGGGAGGCTTGG+TGG | + | chr8_4:54185124-54185143 | Msa1333910:CDS | 50.0% |
| !! | TGGCTCTAAACCAGCGATTC+TGG | - | chr8_4:54185276-54185295 | None:intergenic | 50.0% |
| !! | ACAGACCGGTTTTCATGGCA+CGG | + | chr8_4:54185765-54185784 | Msa1333910:intron | 50.0% |
| ATGTCCATACCTGCACAGGA+TGG | - | chr8_4:54185988-54186007 | None:intergenic | 50.0% | |
| TTCCTCACGGACAACGATGA+TGG | + | chr8_4:54186471-54186490 | Msa1333910:CDS | 50.0% | |
| TTCCATCATCGTTGTCCGTG+AGG | - | chr8_4:54186476-54186495 | None:intergenic | 50.0% | |
| ATCATTCGGAGGAGAAGAGG+AGG | - | chr8_4:54186501-54186520 | None:intergenic | 50.0% | |
| GAGTTTATTGACAGCCCTGC+AGG | + | chr8_4:54186893-54186912 | Msa1333910:intron | 50.0% | |
| TCCATTGAACCTTGGGTGGT+TGG | + | chr8_4:54187775-54187794 | Msa1333910:intron | 50.0% | |
| ACCAACCACCCAAGGTTCAA+TGG | - | chr8_4:54187779-54187798 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+TGG | - | chr8_4:54188199-54188218 | None:intergenic | 50.0% | |
| !! | CACTTGGATTAGTCGGTCCT+TGG | + | chr8_4:54188197-54188216 | Msa1333910:intron | 50.0% |
| GATGATAAGGGGTCTCACTC+AGG | + | chr8_4:54188472-54188491 | Msa1333910:CDS | 50.0% | |
| GGGTCTCACTCAGGTTCATT+GGG | + | chr8_4:54188481-54188500 | Msa1333910:CDS | 50.0% | |
| ! | ACCTACTGGTTGCATTCGGA+TGG | + | chr8_4:54188763-54188782 | Msa1333910:CDS | 50.0% |
| ACCATCCGAATGCAACCAGT+AGG | - | chr8_4:54188767-54188786 | None:intergenic | 50.0% | |
| GTGCGGAGCAGTTTCTCAAG+AGG | + | chr8_4:54184096-54184115 | Msa1333910:CDS | 55.0% | |
| ACCCAAGCTTGGACAGACAG+CGG | + | chr8_4:54184233-54184252 | Msa1333910:intron | 55.0% | |
| GTCTACGCAGTTGTGTGCGA+AGG | + | chr8_4:54184316-54184335 | Msa1333910:intron | 55.0% | |
| TCTATTGTCAGACGCTGGCC+TGG | + | chr8_4:54185077-54185096 | Msa1333910:CDS | 55.0% | |
| ! | CTATTGTCAGACGCTGGCCT+GGG | + | chr8_4:54185078-54185097 | Msa1333910:CDS | 55.0% |
| ! | GGCACATTCTTTGGGAGGCT+TGG | + | chr8_4:54185121-54185140 | Msa1333910:CDS | 55.0% |
| TCTTGAACCAAGATGCGGCG+TGG | - | chr8_4:54185318-54185337 | None:intergenic | 55.0% | |
| ACGCCGCATCTTGGTTCAAG+AGG | + | chr8_4:54185317-54185336 | Msa1333910:CDS | 55.0% | |
| CTTCATAGGCCATCCTGTGC+AGG | + | chr8_4:54185976-54185995 | Msa1333910:intron | 55.0% | |
| TAGGCCATCCTGTGCAGGTA+TGG | + | chr8_4:54185981-54186000 | Msa1333910:intron | 55.0% | |
| GGGGTCTCACTCAGGTTCAT+TGG | + | chr8_4:54188480-54188499 | Msa1333910:CDS | 55.0% | |
| ! | TCAGGTTCATTGGGAGCGTG+TGG | + | chr8_4:54188490-54188509 | Msa1333910:CDS | 55.0% |
| GCCGCTGTCTGTCCAAGCTT+GGG | - | chr8_4:54184237-54184256 | None:intergenic | 60.0% | |
| AGCCGCTGTCTGTCCAAGCT+TGG | - | chr8_4:54184238-54184257 | None:intergenic | 60.0% | |
| ! | GGGTGAGAGGCTAGCTGAAG+AGG | + | chr8_4:54184897-54184916 | Msa1333910:CDS | 60.0% |
| ACCTTTGCCACGCCGCATCT+TGG | + | chr8_4:54185308-54185327 | Msa1333910:CDS | 60.0% | |
| ACCAAGATGCGGCGTGGCAA+AGG | - | chr8_4:54185312-54185331 | None:intergenic | 60.0% | |
| ! | CTCGTGTGGCAGAGGAGCAT+GGG | - | chr8_4:54186919-54186938 | None:intergenic | 60.0% |
| ! | CAGAGGAGCATGGGCCTGCA+GGG | - | chr8_4:54186910-54186929 | None:intergenic | 65.0% |
| GCTCGTGTGGCAGAGGAGCA+TGG | - | chr8_4:54186920-54186939 | None:intergenic | 65.0% | |
| ! | GCAGAGGAGCATGGGCCTGC+AGG | - | chr8_4:54186911-54186930 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 54183552 | 54189085 | 54183552 | ID=Msa1333910;Name=Msa1333910 |
| chr8_4 | mRNA | 54183552 | 54189085 | 54183552 | ID=Msa1333910-mRNA-1;Parent=Msa1333910;Name=Msa1333910-mRNA-1;_AED=0.30;_eAED=0.30;_QI=127|1|1|1|0.9|0.81|11|257|414 |
| chr8_4 | exon | 54183552 | 54183595 | 54183552 | ID=Msa1333910-mRNA-1:exon:16795;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54183628 | 54183973 | 54183628 | ID=Msa1333910-mRNA-1:exon:16796;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54184076 | 54184143 | 54184076 | ID=Msa1333910-mRNA-1:exon:16797;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54184848 | 54184918 | 54184848 | ID=Msa1333910-mRNA-1:exon:16798;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54185071 | 54185349 | 54185071 | ID=Msa1333910-mRNA-1:exon:16799;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54186384 | 54186547 | 54186384 | ID=Msa1333910-mRNA-1:exon:16800;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54186636 | 54186691 | 54186636 | ID=Msa1333910-mRNA-1:exon:16801;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54187042 | 54187094 | 54187042 | ID=Msa1333910-mRNA-1:exon:16802;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54187177 | 54187297 | 54187177 | ID=Msa1333910-mRNA-1:exon:16803;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54188468 | 54188565 | 54188468 | ID=Msa1333910-mRNA-1:exon:16804;Parent=Msa1333910-mRNA-1 |
| chr8_4 | exon | 54188757 | 54189085 | 54188757 | ID=Msa1333910-mRNA-1:exon:16805;Parent=Msa1333910-mRNA-1 |
| chr8_4 | five_prime_UTR | 54183552 | 54183595 | 54183552 | ID=Msa1333910-mRNA-1:five_prime_utr;Parent=Msa1333910-mRNA-1 |
| chr8_4 | five_prime_UTR | 54183628 | 54183710 | 54183628 | ID=Msa1333910-mRNA-1:five_prime_utr;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54183711 | 54183973 | 54183711 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54184076 | 54184143 | 54184076 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54184848 | 54184918 | 54184848 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54185071 | 54185349 | 54185071 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54186384 | 54186547 | 54186384 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54186636 | 54186691 | 54186636 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54187042 | 54187094 | 54187042 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54187177 | 54187297 | 54187177 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54188468 | 54188565 | 54188468 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | CDS | 54188757 | 54188828 | 54188757 | ID=Msa1333910-mRNA-1:cds;Parent=Msa1333910-mRNA-1 |
| chr8_4 | three_prime_UTR | 54188829 | 54189085 | 54188829 | ID=Msa1333910-mRNA-1:three_prime_utr;Parent=Msa1333910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
