AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1335980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335980 MtrunA17_Chr7g0270511 97.525 1374 34 0 1 1374 1 1374 0.0 2775
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335980 AT4G01860.2 50.359 1392 584 22 1 1369 1 1308 0.0 1353
Msa1335980 AT4G01860.1 50.359 1392 584 22 1 1369 1 1308 0.0 1353

Find 328 sgRNAs with CRISPR-Local

Find 734 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTGCCCTTGTCTTATT+TGG 0.100506 tig0000788:-68659 Msa1335980:CDS
CCAATATGCTCCAACATATT+AGG 0.144819 tig0000788:+66953 None:intergenic
CTGATGGGAGTGTTACATTT+TGG 0.150669 tig0000788:-60477 Msa1335980:CDS
TTGTTGTACGACTTAGAATT+TGG 0.179799 tig0000788:-70373 Msa1335980:CDS
TGCATTACTTGTTCCTTTAT+TGG 0.190433 tig0000788:-61096 Msa1335980:CDS
AAAACAATAAATATCGATTA+TGG 0.196659 tig0000788:-59947 Msa1335980:CDS
TACTTATTGGTGCAAATCTT+TGG 0.221795 tig0000788:-66443 Msa1335980:CDS
CCCTGACAGTCATGGTCTTC+TGG 0.223038 tig0000788:+68961 None:intergenic
GTTATAAGAAGTGACAAATT+TGG 0.231727 tig0000788:+67088 None:intergenic
TTGGTGTCCTTCAAGTATTC+AGG 0.257776 tig0000788:+59887 None:intergenic
GGCAGCTATTGGGTACTTAT+TGG 0.258579 tig0000788:-66456 Msa1335980:CDS
TTGTTAAATGTGCTGGTTCC+AGG 0.258773 tig0000788:-61393 Msa1335980:intron
AGGATTGTACATGTCGTATA+TGG 0.266171 tig0000788:-67758 Msa1335980:CDS
CCTAATATGTTGGAGCATAT+TGG 0.267421 tig0000788:-66953 Msa1335980:CDS
ACACCTTTAAAATGATTTAC+TGG 0.272491 tig0000788:+63888 None:intergenic
TCTGTGTGTACTTGAATATT+TGG 0.272573 tig0000788:+61579 None:intergenic
TTGTTGTCTTCAGATTTATT+TGG 0.277251 tig0000788:+60217 None:intergenic
CATCTGTAGATTTCATAGTA+TGG 0.278027 tig0000788:-63455 Msa1335980:CDS
AATGCAGAATTTGCAATTTA+CGG 0.280829 tig0000788:-63574 Msa1335980:CDS
GTTTCCTTTGCTAAAGAATC+TGG 0.283970 tig0000788:-63949 Msa1335980:CDS
GGAAAACATCTCTGTTCTTC+CGG 0.284169 tig0000788:+66985 None:intergenic
ATACACGAAGATATGCTTCT+AGG 0.291653 tig0000788:-62128 Msa1335980:CDS
GCAGTTGATGTTGCTGAAAA+TGG 0.293815 tig0000788:-61532 Msa1335980:CDS
TTTGTACTCAATGCGGTTAT+GGG 0.298417 tig0000788:-69544 Msa1335980:CDS
TAGAAGAGGAAGAGAGTGAT+TGG 0.299359 tig0000788:+70505 None:intergenic
CAAGTTTGGTCATTGGGTTT+TGG 0.308075 tig0000788:-70179 Msa1335980:CDS
TTCTTGTCTGTCCAGGGGTT+TGG 0.308522 tig0000788:-67026 Msa1335980:CDS
CCCTTACGTAAGCCTTATAA+AGG 0.311898 tig0000788:-61041 Msa1335980:intron
CCAGAGTTTCAATCCTCCTC+TGG 0.315888 tig0000788:+64408 None:intergenic
CAATTCTAATGCGGTTCTTA+AGG 0.317103 tig0000788:-69687 Msa1335980:CDS
TGTACAGAGGTAGGGGTATA+TGG 0.319865 tig0000788:-67126 Msa1335980:intron
CTTAAGAACCGCATTAGAAT+TGG 0.322600 tig0000788:+69688 None:intergenic
TGGTACATCACCTAGAAAAT+AGG 0.323933 tig0000788:+63266 None:intergenic
GTGCAAGACAAACCTTTATA+AGG 0.325547 tig0000788:+61029 None:intergenic
GGTGCAAATCTTTGGGATCT+AGG 0.325889 tig0000788:-66435 Msa1335980:intron
ATCCATTTGTTGCCCAAGTT+TGG 0.327994 tig0000788:-70193 Msa1335980:CDS
TCGTTTGAAAATGACGAGTT+TGG 0.329316 tig0000788:-70235 Msa1335980:CDS
TGGAGATCTACGTGGAAATA+TGG 0.335978 tig0000788:-63976 Msa1335980:CDS
CTTTACTTGGCAAGCTGAAA+TGG 0.338289 tig0000788:-66482 Msa1335980:CDS
CAAAGCGTGTCTTAACTTCT+TGG 0.340446 tig0000788:-61741 Msa1335980:CDS
CAATATGCTCCAACATATTA+GGG 0.340653 tig0000788:+66954 None:intergenic
CGTTTGAAAATGACGAGTTT+GGG 0.343426 tig0000788:-70234 Msa1335980:CDS
TTTCTAGTATATTGGCAAAA+TGG 0.347963 tig0000788:-58990 Msa1335980:three_prime_UTR
ACTTATTGGTGCAAATCTTT+GGG 0.348034 tig0000788:-66442 Msa1335980:CDS
CATTATCAGATTGCTGTTGC+TGG 0.351974 tig0000788:-59181 Msa1335980:CDS
ATGCAGAATTTGCAATTTAC+GGG 0.352156 tig0000788:-63573 Msa1335980:CDS
GCTACTTAAAAGCAGGAAAC+TGG 0.352365 tig0000788:-61719 Msa1335980:CDS
TTGGACATAATGCTCGAGTT+TGG 0.357372 tig0000788:-68640 Msa1335980:CDS
AACCCCAGATGTAGCACATT+TGG 0.358029 tig0000788:-59918 Msa1335980:CDS
TGTTGCCCAAGTTTGGTCAT+TGG 0.359027 tig0000788:-70186 Msa1335980:CDS
CAAAACCCAATGACCAAACT+TGG 0.360015 tig0000788:+70180 None:intergenic
GACAAAACAGGTGCCAATAA+AGG 0.361121 tig0000788:+61083 None:intergenic
TTATAAGAAGTGACAAATTT+GGG 0.361733 tig0000788:+67089 None:intergenic
GAATTTAGTCAATGAGAATA+AGG 0.364171 tig0000788:-63433 Msa1335980:intron
TATAATGCAGCGCACGTGTA+TGG 0.367463 tig0000788:-68721 Msa1335980:intron
GTTGCCCAAGTTTGGTCATT+GGG 0.367580 tig0000788:-70185 Msa1335980:CDS
AGAAAAGAGTGAAAATGTTT+CGG 0.370571 tig0000788:-70261 Msa1335980:CDS
TGAAATGGAGAGGCAGCTAT+TGG 0.370891 tig0000788:-66467 Msa1335980:CDS
TGGACATAATGCTCGAGTTT+GGG 0.372601 tig0000788:-68639 Msa1335980:CDS
TTGTCACTTCTTATAACTGC+TGG 0.373209 tig0000788:-67082 Msa1335980:CDS
AAACAATAAATATCGATTAT+GGG 0.377190 tig0000788:-59946 Msa1335980:CDS
GTGACAATTCAGTTTGCATA+TGG 0.378615 tig0000788:-69718 Msa1335980:CDS
GAAAACATCTCTGTTCTTCC+GGG 0.382830 tig0000788:+66986 None:intergenic
GTGACCAAATGTGCTACATC+TGG 0.387061 tig0000788:+59914 None:intergenic
AAATCAAGTTGGATTGCAAC+TGG 0.388225 tig0000788:-62077 Msa1335980:CDS
AGCTTGTCCAGGTCAGCAAC+GGG 0.388945 tig0000788:-66654 Msa1335980:CDS
GGCCTCATTCTTGTCTGTCC+AGG 0.392682 tig0000788:-67033 Msa1335980:CDS
AGATGCTACAGTTATGTTAC+GGG 0.393946 tig0000788:-61254 Msa1335980:CDS
TTTGCAGATAACATCAAAGT+TGG 0.395590 tig0000788:-60529 Msa1335980:intron
TAAATCTGAAGACAACAATA+TGG 0.397589 tig0000788:-60212 Msa1335980:CDS
ATATTGTACCGGATGCAATA+TGG 0.399697 tig0000788:+69502 None:intergenic
AATGTGTTTGGATGCATGTT+TGG 0.403377 tig0000788:-64290 Msa1335980:CDS
GGTCCATGTCAAAATTGCTT+GGG 0.405283 tig0000788:-61918 Msa1335980:CDS
CAGTTAGATTGAGCTTTACT+TGG 0.408055 tig0000788:-66495 Msa1335980:CDS
CAGCAACAGCAATCTGATAA+TGG 0.408486 tig0000788:+59182 None:intergenic
ACGCACAGGGAGAGGAAGTC+AGG 0.409964 tig0000788:-60371 Msa1335980:CDS
TGGAATGCGGATAATGTGTT+TGG 0.413922 tig0000788:-64302 Msa1335980:CDS
GTGTCTGGACGGATGGATCT+TGG 0.416857 tig0000788:-59419 Msa1335980:CDS
TCCAGAAGACCATGACTGTC+AGG 0.417114 tig0000788:-68962 Msa1335980:CDS
AGATGGTTGTATATGCTATC+TGG 0.419219 tig0000788:-63610 Msa1335980:CDS
CACAAGACGACCATGCTATT+CGG 0.423946 tig0000788:+68857 None:intergenic
CAGATTGCTGTTGCTGGAAG+AGG 0.429461 tig0000788:-59175 Msa1335980:CDS
GCCCTAGCAGATAACGCTTC+AGG 0.429563 tig0000788:+59300 None:intergenic
GACCAAACTTGGGCAACAAA+TGG 0.431698 tig0000788:+70191 None:intergenic
GCCTCATTCTTGTCTGTCCA+GGG 0.433589 tig0000788:-67032 Msa1335980:CDS
AGAAGAGGAAGAGAGTGATT+GGG 0.433998 tig0000788:+70506 None:intergenic
CAGAGTTTCAATCCTCCTCT+GGG 0.438043 tig0000788:+64409 None:intergenic
CAGATGCTACAGTTATGTTA+CGG 0.438759 tig0000788:-61255 Msa1335980:CDS
TGTTGTACGACTTAGAATTT+GGG 0.439872 tig0000788:-70372 Msa1335980:CDS
GGATGCATGTTTGGAGGAAG+AGG 0.440955 tig0000788:-64281 Msa1335980:intron
TGTAGTAGAATTGATGCTTT+CGG 0.444030 tig0000788:+60258 None:intergenic
GCAAAACAGTTCTTCATCTC+TGG 0.445470 tig0000788:+63246 None:intergenic
CCAAATAAGACAAGGGCAAT+GGG 0.449054 tig0000788:+68659 None:intergenic
CCAGAGGAGGATTGAAACTC+TGG 0.449865 tig0000788:-64408 Msa1335980:CDS
TGGGTTTGACTCTGCTATCA+AGG 0.450391 tig0000788:-67062 Msa1335980:CDS
CACGTTCTATTAGTTTACTC+TGG 0.450782 tig0000788:+59349 None:intergenic
CATTTGCATCCCTAATATGT+TGG 0.451689 tig0000788:-66963 Msa1335980:CDS
TTGAAGATTTATCATGTTGA+GGG 0.452264 tig0000788:+68989 None:intergenic
TTAAGTTCGCTCCTCTCATC+AGG 0.453249 tig0000788:+61814 None:intergenic
ACTCTCCAGGTATTGAGAAT+TGG 0.453323 tig0000788:-61939 Msa1335980:CDS
CCCACTGAAATCAGTAAAGT+TGG 0.455845 tig0000788:+61766 None:intergenic
AAGCTTCCACACTGTCAGTC+AGG 0.457149 tig0000788:+60452 None:intergenic
CATCATGCTGCTTATCAGTT+CGG 0.457544 tig0000788:+61680 None:intergenic
AGCGTTGTTGTAACTAAGCT+TGG 0.459800 tig0000788:-63843 Msa1335980:CDS
GGTTTCTATGTACAGAGGTA+GGG 0.462531 tig0000788:-67134 Msa1335980:intron
AGCATATTGGATTGACAGAC+AGG 0.465252 tig0000788:-66940 Msa1335980:intron
CTTCTTGGCTACTTAAAAGC+AGG 0.466077 tig0000788:-61726 Msa1335980:CDS
TCCTTGTTCAAATGAGTCCT+TGG 0.468117 tig0000788:+66603 None:intergenic
TGTCTGGACGGATGGATCTT+GGG 0.468354 tig0000788:-59418 Msa1335980:CDS
CAACATATTAGGGATGCAAA+TGG 0.469506 tig0000788:+66964 None:intergenic
CTATTAGATTGTGAAGGGTC+AGG 0.471118 tig0000788:+64379 None:intergenic
TGTCGTATATGGGGAATTGA+TGG 0.473433 tig0000788:-67747 Msa1335980:CDS
AAACGACCACGCACAGGGAG+AGG 0.476888 tig0000788:-60379 Msa1335980:CDS
GCAGAATTCATATCAAGTTA+TGG 0.478243 tig0000788:-64322 Msa1335980:CDS
GGATTGTACATGTCGTATAT+GGG 0.480492 tig0000788:-67757 Msa1335980:CDS
TTCGATGGAATTCGTGTGCA+CGG 0.482977 tig0000788:-70325 Msa1335980:CDS
CACTGAACCTGAATACTTGA+AGG 0.482986 tig0000788:-59894 Msa1335980:CDS
GGTTCGGGCAGATTGTCGTT+TGG 0.483519 tig0000788:-69020 Msa1335980:intron
TTTGTGCCCCGTTGCTGACC+TGG 0.483665 tig0000788:+66647 None:intergenic
GAAGTTCTCCATATTGCATC+CGG 0.483799 tig0000788:-69510 Msa1335980:CDS
AAGGATGTGGTGATGAGGAT+TGG 0.483965 tig0000788:-66585 Msa1335980:CDS
TCCAAATAAGACAAGGGCAA+TGG 0.484915 tig0000788:+68658 None:intergenic
GAATCTGTGATTGTAGTGTT+TGG 0.486217 tig0000788:-70286 Msa1335980:CDS
TGTGTACTTGAATATTTGGT+TGG 0.486913 tig0000788:+61583 None:intergenic
CTGCATGGATTTATTGTCCA+AGG 0.489582 tig0000788:-66620 Msa1335980:CDS
TCCATGCCTCTGAAAATTGT+TGG 0.489686 tig0000788:-58956 Msa1335980:three_prime_UTR
GTTTGATTTAGGTACTCTCC+AGG 0.491977 tig0000788:-61952 Msa1335980:intron
TGAAAATTCCATGTGGTGGC+TGG 0.492156 tig0000788:-63302 Msa1335980:CDS
GGAAAGACAAGGCAACAATC+AGG 0.492374 tig0000788:-60305 Msa1335980:CDS
ATGCAAATAGTGGACTTCTC+AGG 0.492584 tig0000788:-59151 Msa1335980:CDS
ACCTTTATAAGGCTTACGTA+AGG 0.493114 tig0000788:+61040 None:intergenic
GAGATAAACATGAGGATGAC+TGG 0.493426 tig0000788:-61441 Msa1335980:CDS
CTGCATCGTGGCCCTTACCT+TGG 0.493851 tig0000788:-70560 Msa1335980:CDS
ACTAAAAGATAATATATATG+AGG 0.493898 tig0000788:-68923 Msa1335980:CDS
TGACCAAATGTGCTACATCT+GGG 0.493927 tig0000788:+59915 None:intergenic
TTTGGATGTTTGCTTCCTCA+AGG 0.494996 tig0000788:-70161 Msa1335980:intron
TTGTGCTGCTGCCAAACCCC+TGG 0.495622 tig0000788:+67015 None:intergenic
TATGAAGGTGTCTGGACGGA+TGG 0.496015 tig0000788:-59426 Msa1335980:intron
TGGTCCATGTCAAAATTGCT+TGG 0.496268 tig0000788:-61919 Msa1335980:CDS
TTGATCAGCGGGTCCGATGT+TGG 0.500324 tig0000788:-59380 Msa1335980:CDS
GTTGAAGATTTATCATGTTG+AGG 0.501233 tig0000788:+68988 None:intergenic
AGTTTGCATATGCAATTCCA+TGG 0.501496 tig0000788:-62176 Msa1335980:CDS
CTGTTTACCTTGTTCGAATG+TGG 0.501936 tig0000788:-69768 Msa1335980:CDS
TCCAACTTTACTGATTTCAG+TGG 0.503304 tig0000788:-61767 Msa1335980:CDS
GAAATGGAGAGGCAGCTATT+GGG 0.503374 tig0000788:-66466 Msa1335980:CDS
CATGCTAAATTATGTGAGGC+TGG 0.503543 tig0000788:-66694 Msa1335980:CDS
TGTCACTTCTTATAACTGCT+GGG 0.507649 tig0000788:-67081 Msa1335980:CDS
TGACAATTCAGTTTGCATAT+GGG 0.507831 tig0000788:-69717 Msa1335980:CDS
TGTTAATACCATAAGCGAAA+GGG 0.511090 tig0000788:+61220 None:intergenic
GCAGATAACGCTTCAGGCTC+CGG 0.512937 tig0000788:+59306 None:intergenic
CGAATAGCATGGTCGTCTTG+TGG 0.513606 tig0000788:-68856 Msa1335980:CDS
GGTACATTGGTTGTAGCTGA+TGG 0.513901 tig0000788:+61835 None:intergenic
AATTGCATATGCAAACTTAG+AGG 0.515996 tig0000788:+62182 None:intergenic
AACAATAAATATCGATTATG+GGG 0.516029 tig0000788:-59945 Msa1335980:CDS
GGAACTATCATTAGTTTGCC+CGG 0.518035 tig0000788:+60039 None:intergenic
AATGTTTACATTGTGATTAG+CGG 0.518261 tig0000788:-60505 Msa1335980:CDS
TACCTCGTTAAATATTGTAC+CGG 0.522245 tig0000788:+69491 None:intergenic
CCATGCCTCTGAAAATTGTT+GGG 0.524674 tig0000788:-58955 Msa1335980:three_prime_UTR
GCTGAGATGTCGCCAAGGTA+AGG 0.525788 tig0000788:+70548 None:intergenic
CCTCGCATCATTCATCGTGC+TGG 0.526737 tig0000788:+59125 None:intergenic
GATTGGATTGCCATCGGAGA+TGG 0.527384 tig0000788:-66568 Msa1335980:CDS
ATTTCTAAATCTAATCCTGC+TGG 0.528324 tig0000788:-59016 Msa1335980:three_prime_UTR
ACTGGATTAATAATAACGTT+GGG 0.530946 tig0000788:-62214 Msa1335980:CDS
ATGGTAGAGATAACCGTGAT+TGG 0.531318 tig0000788:+66714 None:intergenic
GTTCTTAAGGTTCAATCACC+AGG 0.532140 tig0000788:-69674 Msa1335980:intron
TTGCTTGGGGAGCATGTTGG+AGG 0.533350 tig0000788:-61904 Msa1335980:CDS
TTGCTAAAGAATCTGGTGCT+TGG 0.533571 tig0000788:-63942 Msa1335980:CDS
GTCAGGGTGGTAGACGGTGG+AGG 0.534764 tig0000788:-60354 Msa1335980:CDS
CACTGGATTAATAATAACGT+TGG 0.535435 tig0000788:-62215 Msa1335980:CDS
AGCCTGAAGCGTTATCTGCT+AGG 0.537085 tig0000788:-59302 Msa1335980:CDS
GCATGTCAGTGGAAAGCCAC+TGG 0.538127 tig0000788:+61605 None:intergenic
CTGAGATGTCGCCAAGGTAA+GGG 0.539241 tig0000788:+70549 None:intergenic
TTCTGACTATTAGATTGTGA+AGG 0.539602 tig0000788:+64373 None:intergenic
TGCGTGTACAGCATAGTTAG+TGG 0.540931 tig0000788:-60016 Msa1335980:CDS
AGCACCAGATTCTTTAGCAA+AGG 0.541913 tig0000788:+63945 None:intergenic
ATTTCCTTTACCATCTCCGA+TGG 0.543707 tig0000788:+66558 None:intergenic
ACCTTTCACAGAAGAGCTGT+GGG 0.544671 tig0000788:+59802 None:intergenic
GCCTGAAGCGTTATCTGCTA+GGG 0.545108 tig0000788:-59301 Msa1335980:CDS
GTTTCTATGTACAGAGGTAG+GGG 0.547064 tig0000788:-67133 Msa1335980:intron
GTAAAGCTCAATCTAACTGT+AGG 0.548252 tig0000788:+66499 None:intergenic
CATGTTCAGACTGGAGCAGA+TGG 0.548299 tig0000788:-63627 Msa1335980:intron
TTCAACTGGACTTGATCAGC+GGG 0.549141 tig0000788:-59391 Msa1335980:CDS
CATGTTTCAGAGATAAAAGC+CGG 0.549233 tig0000788:-60058 Msa1335980:CDS
TGTAAACTTGTGGGACATGA+AGG 0.549276 tig0000788:-68889 Msa1335980:CDS
ATAATGCAGCGCACGTGTAT+GGG 0.549545 tig0000788:-68720 Msa1335980:intron
CTTCTTCAATGACGTTCCAG+TGG 0.549653 tig0000788:-61621 Msa1335980:CDS
ATAACCGCATTGAGTACAAA+AGG 0.551306 tig0000788:+69547 None:intergenic
TTTAAGCAGTGGGTTATCAA+AGG 0.551705 tig0000788:-60326 Msa1335980:CDS
GTGATTAGCGGATCTACTGA+TGG 0.553847 tig0000788:-60493 Msa1335980:CDS
ATGTTGGAGGATCAGCTGTA+AGG 0.554309 tig0000788:-61891 Msa1335980:CDS
TATGGGCTGTTCCTACTGAA+AGG 0.555653 tig0000788:-68703 Msa1335980:CDS
CAGCTTGTCCAGGTCAGCAA+CGG 0.556780 tig0000788:-66655 Msa1335980:CDS
GGAGGAGATCTTTAAGCAGT+GGG 0.558558 tig0000788:-60336 Msa1335980:CDS
TACCTTTCACAGAAGAGCTG+TGG 0.559530 tig0000788:+59801 None:intergenic
GAGATACCGGCTAGTAGAAG+AGG 0.562507 tig0000788:+70491 None:intergenic
AGCATCAATTCTACTACACA+TGG 0.563304 tig0000788:-60253 Msa1335980:CDS
ATATGCTATCTGGAATATGA+TGG 0.564154 tig0000788:-63600 Msa1335980:CDS
ATGGACCAATTCTCAATACC+TGG 0.564208 tig0000788:+61934 None:intergenic
TGGAAGAGGGATGCAAATAG+TGG 0.564312 tig0000788:-59161 Msa1335980:CDS
TCGATGGAATTCGTGTGCAC+GGG 0.565107 tig0000788:-70324 Msa1335980:CDS
GCCCACAGCTCTTCTGTGAA+AGG 0.565469 tig0000788:-59803 Msa1335980:intron
AGATTTATTTGGCACTGAAG+AGG 0.566451 tig0000788:+60228 None:intergenic
ACAGAAGAGCTGTGGGCCGA+AGG 0.569211 tig0000788:+59809 None:intergenic
GAAGTCAGGGTGGTAGACGG+TGG 0.573707 tig0000788:-60357 Msa1335980:CDS
GAGGAAGTCAGGGTGGTAGA+CGG 0.574247 tig0000788:-60360 Msa1335980:CDS
GCGTGTACAGCATAGTTAGT+GGG 0.574259 tig0000788:-60015 Msa1335980:CDS
GGAGACAGTTGACACCAGAT+TGG 0.574415 tig0000788:+60080 None:intergenic
ATGGGCTGTTCCTACTGAAA+GGG 0.574449 tig0000788:-68702 Msa1335980:CDS
TTGTACTCAATGCGGTTATG+GGG 0.574700 tig0000788:-69543 Msa1335980:CDS
CCTCATTCTTGTCTGTCCAG+GGG 0.574704 tig0000788:-67031 Msa1335980:CDS
AATTAGATCCCTGACAGTCA+TGG 0.575556 tig0000788:+68953 None:intergenic
ATTGCCATCGGAGATGGTAA+AGG 0.575715 tig0000788:-66562 Msa1335980:CDS
TCATCAAGAAGCTATGCAGC+AGG 0.576180 tig0000788:-63483 Msa1335980:CDS
GGACGCCGCCAGCCACCACA+TGG 0.576626 tig0000788:+63294 None:intergenic
AATGAATCTTCCCTTTCAGT+AGG 0.577095 tig0000788:+68692 None:intergenic
AGATATACAGAAAATAATGT+GGG 0.579058 tig0000788:-61559 Msa1335980:CDS
GCTCCTCTCATCAGGTACAT+TGG 0.580549 tig0000788:+61822 None:intergenic
CACGTAGATCTCCACACGCT+AGG 0.581020 tig0000788:+63985 None:intergenic
CCTTTATAAGGCTTACGTAA+GGG 0.582662 tig0000788:+61041 None:intergenic
TGTTCACGTATGTAAACTTG+TGG 0.583300 tig0000788:-68899 Msa1335980:CDS
GACTCATTTGAACAAGGATG+TGG 0.583582 tig0000788:-66598 Msa1335980:CDS
TGGAGGAGATCTTTAAGCAG+TGG 0.583944 tig0000788:-60337 Msa1335980:CDS
ATATGCTGCAATGACAAAAC+AGG 0.584549 tig0000788:+61071 None:intergenic
CGGGGCACAAATTATCTGCA+TGG 0.584827 tig0000788:-66635 Msa1335980:CDS
TCTCTTCCTCTTCTACTAGC+CGG 0.585096 tig0000788:-70497 Msa1335980:intron
TCGTTGGAATCAGCTTGTCC+AGG 0.585986 tig0000788:-66665 Msa1335980:CDS
GCAGCAGCACAATTATCCCC+CGG 0.586399 tig0000788:-67004 Msa1335980:CDS
CCAACTTTACTGATTTCAGT+GGG 0.587777 tig0000788:-61766 Msa1335980:CDS
GTTCACGTATGTAAACTTGT+GGG 0.587882 tig0000788:-68898 Msa1335980:CDS
TCAGCCTTAGTTTCCAACAC+GGG 0.588107 tig0000788:+60160 None:intergenic
TGTCTGTTTCTGATGACCGT+AGG 0.588107 tig0000788:-68822 Msa1335980:intron
ATTGCATATGCAAACTTAGA+GGG 0.589333 tig0000788:+62183 None:intergenic
GTCCATGTCAAAATTGCTTG+GGG 0.589465 tig0000788:-61917 Msa1335980:CDS
AGGAATGTATCTCTCTCCCA+TGG 0.589689 tig0000788:+62159 None:intergenic
GTGTTTGGATGCATGTTTGG+AGG 0.590096 tig0000788:-64287 Msa1335980:CDS
TAAATCAGAATAATTTATGG+AGG 0.591288 tig0000788:-59071 Msa1335980:three_prime_UTR
TCTGACTATTAGATTGTGAA+GGG 0.593505 tig0000788:+64374 None:intergenic
TTGTTAATACCATAAGCGAA+AGG 0.594651 tig0000788:+61219 None:intergenic
TGACTTCCTCTCCCTGTGCG+TGG 0.594803 tig0000788:+60373 None:intergenic
CAGCCTTAGTTTCCAACACG+GGG 0.596151 tig0000788:+60161 None:intergenic
TATCTGCTAGGGCATGTAGC+AGG 0.597762 tig0000788:-59290 Msa1335980:intron
GTGAGGCTGGAGGTGCTCGT+TGG 0.598740 tig0000788:-66681 Msa1335980:CDS
CGAACTTAATGCTGCTGCTG+AGG 0.600630 tig0000788:-61800 Msa1335980:CDS
GTTTGCATATGCAATTCCAT+GGG 0.601750 tig0000788:-62175 Msa1335980:CDS
TTTCAACTGGACTTGATCAG+CGG 0.601937 tig0000788:-59392 Msa1335980:CDS
CGCACAGGGAGAGGAAGTCA+GGG 0.604321 tig0000788:-60370 Msa1335980:CDS
TGATAAGCAGCATGATGCAA+AGG 0.604570 tig0000788:-61674 Msa1335980:CDS
TAATATATATACATAGACAC+TGG 0.606481 tig0000788:-62232 Msa1335980:CDS
ACTCTGCTATCAAGGTGCAT+AGG 0.608278 tig0000788:-67054 Msa1335980:CDS
TCACCTAGAAAATAGGAATG+AGG 0.609684 tig0000788:+63273 None:intergenic
CGTCATTGAAGAAGACATGC+TGG 0.609954 tig0000788:+61630 None:intergenic
TATGCTATCTGGAATATGAT+GGG 0.610158 tig0000788:-63599 Msa1335980:CDS
ATGTGACACAATATCCCTCA+TGG 0.611791 tig0000788:+64348 None:intergenic
ACACTTAATAGTTAGTGTGC+CGG 0.612135 tig0000788:-59325 Msa1335980:CDS
TGAAGATTTATCATGTTGAG+GGG 0.612802 tig0000788:+68990 None:intergenic
AGATTGCTGTTGCTGGAAGA+GGG 0.612964 tig0000788:-59174 Msa1335980:CDS
AAAACCCAATGACCAAACTT+GGG 0.613032 tig0000788:+70181 None:intergenic
AAGACCGACGCTTAATCGAA+TGG 0.614837 tig0000788:-70586 Msa1335980:CDS
TATTTCACATATTTCCGCTG+AGG 0.614840 tig0000788:+60132 None:intergenic
AAATTGCTTGGGGAGCATGT+TGG 0.615187 tig0000788:-61907 Msa1335980:CDS
ATATACTAGAAAATACCAGC+AGG 0.615726 tig0000788:+59001 None:intergenic
TGATTAGCGGATCTACTGAT+GGG 0.616349 tig0000788:-60492 Msa1335980:CDS
CAGATATACAGAAAATAATG+TGG 0.617032 tig0000788:-61560 Msa1335980:CDS
CATTATGTCCAAATAAGACA+AGG 0.617509 tig0000788:+68651 None:intergenic
AAAACATCTCTGTTCTTCCG+GGG 0.617720 tig0000788:+66987 None:intergenic
TCCAAGGACTCATTTGAACA+AGG 0.618385 tig0000788:-66604 Msa1335980:CDS
GATTGTACATGTCGTATATG+GGG 0.618528 tig0000788:-67756 Msa1335980:CDS
GGACATTTCCAATTCTAATG+CGG 0.620070 tig0000788:-69696 Msa1335980:CDS
TTGCAACTGGATGTGAAGAC+GGG 0.620552 tig0000788:-62064 Msa1335980:CDS
ATTGCAACTGGATGTGAAGA+CGG 0.621857 tig0000788:-62065 Msa1335980:CDS
CTTGGCAAGCTGAAATGGAG+AGG 0.623202 tig0000788:-66477 Msa1335980:CDS
AAATGGATCAATGTTAACTG+TGG 0.624822 tig0000788:+70208 None:intergenic
AGAGAGCTGAGATGTCGCCA+AGG 0.629859 tig0000788:+70543 None:intergenic
TCACTCTCCACATTCGAACA+AGG 0.630421 tig0000788:+69761 None:intergenic
CTACCATGCTAAATTATGTG+AGG 0.633890 tig0000788:-66698 Msa1335980:CDS
CAGCCTCACATAATTTAGCA+TGG 0.634362 tig0000788:+66695 None:intergenic
CGTGTACAGCATAGTTAGTG+GGG 0.634510 tig0000788:-60014 Msa1335980:CDS
ATATTTGGTTGGCATGTCAG+TGG 0.634581 tig0000788:+61594 None:intergenic
TTTACAACTGACCCCAGAGG+AGG 0.635398 tig0000788:-64421 Msa1335980:CDS
AAGCTTAGTTACAACAACGC+TGG 0.636558 tig0000788:+63845 None:intergenic
CCAGAAGACCATGACTGTCA+GGG 0.636656 tig0000788:-68961 Msa1335980:CDS
ACGGGACTGTGAGATTGACT+TGG 0.637311 tig0000788:-62046 Msa1335980:intron
TGAACAAGGATGTGGTGATG+AGG 0.639310 tig0000788:-66590 Msa1335980:CDS
ATCAGCCTTAGTTTCCAACA+CGG 0.640059 tig0000788:+60159 None:intergenic
CCCCTGGACAGACAAGAATG+AGG 0.640294 tig0000788:+67031 None:intergenic
AAAAGAAGCAGCAATGGCGA+CGG 0.640852 tig0000788:-70612 Msa1335980:exon
GACCAAATGTGCTACATCTG+GGG 0.641048 tig0000788:+59916 None:intergenic
TCATATCAAGTTATGGAATG+CGG 0.642708 tig0000788:-64315 Msa1335980:CDS
ATGTTTCAGAGATAAAAGCC+GGG 0.646123 tig0000788:-60057 Msa1335980:CDS
AAATTCCATGTGGTGGCTGG+CGG 0.646824 tig0000788:-63299 Msa1335980:CDS
TATTTGCAGGTCCTAGCGTG+TGG 0.647675 tig0000788:-63996 Msa1335980:intron
CAACCAATGTACCTGATGAG+AGG 0.648622 tig0000788:-61825 Msa1335980:CDS
AAACATCTCTGTTCTTCCGG+GGG 0.652252 tig0000788:+66988 None:intergenic
GTTTATTGTCACTGTCAGTG+AGG 0.653378 tig0000788:-67778 Msa1335980:CDS
GACGCCATTCGATTAAGCGT+CGG 0.656410 tig0000788:+70582 None:intergenic
TGTTTCTGTTGATAACAACT+CGG 0.657144 tig0000788:-63514 Msa1335980:CDS
GTTCAATCTTCCGAATAGCA+TGG 0.658501 tig0000788:-68867 Msa1335980:CDS
GATGAGGATTGGATTGCCAT+CGG 0.659201 tig0000788:-66574 Msa1335980:CDS
ATGCTATCTGGAATATGATG+GGG 0.665434 tig0000788:-63598 Msa1335980:CDS
CTAATAGTCAGAACTCCATG+AGG 0.666334 tig0000788:-64363 Msa1335980:CDS
GTGGTGAAAATTCCATGTGG+TGG 0.667441 tig0000788:-63306 Msa1335980:CDS
CCTTTAAAATGATTTACTGG+CGG 0.668719 tig0000788:+63891 None:intergenic
ATTATGTCCAAATAAGACAA+GGG 0.668847 tig0000788:+68652 None:intergenic
TCTGGTGAAGATGCCAACAT+CGG 0.669546 tig0000788:+59367 None:intergenic
ATCTTCGTGTATAAAGCACA+AGG 0.673269 tig0000788:+62139 None:intergenic
GAGGAGGATTGAAACTCTGG+AGG 0.674506 tig0000788:-64405 Msa1335980:CDS
AGAGTTTCAATCCTCCTCTG+GGG 0.675928 tig0000788:+64410 None:intergenic
TAATAGTCAGAACTCCATGA+GGG 0.677688 tig0000788:-64362 Msa1335980:CDS
TCAGTCAATTCATCATCTCG+TGG 0.680018 tig0000788:-59984 Msa1335980:CDS
ATCGAATGGCGTCTGCATCG+TGG 0.680293 tig0000788:-70572 Msa1335980:CDS
CCAGCACGATGAATGATGCG+AGG 0.680997 tig0000788:-59125 Msa1335980:exon
GGGTTATCAAAGGAAAGACA+AGG 0.689913 tig0000788:-60316 Msa1335980:CDS
GATATACAGAAAATAATGTG+GGG 0.690770 tig0000788:-61558 Msa1335980:CDS
ATCCGGTACAATATTTAACG+AGG 0.691138 tig0000788:-69493 Msa1335980:intron
ACAGGGAGAGGAAGTCAGGG+TGG 0.706581 tig0000788:-60367 Msa1335980:CDS
GCATCAATTCTACTACACAT+GGG 0.707863 tig0000788:-60252 Msa1335980:CDS
TATATTGGCAAAATGGTCTG+TGG 0.709393 tig0000788:-58983 Msa1335980:three_prime_UTR
GTGTACAGCATAGTTAGTGG+GGG 0.709739 tig0000788:-60013 Msa1335980:CDS
TTGGGACCTGACTGACAGTG+TGG 0.711195 tig0000788:-60458 Msa1335980:CDS
GCTTGTCCAGGTCAGCAACG+GGG 0.712622 tig0000788:-66653 Msa1335980:CDS
GTCTTTACAACTGACCCCAG+AGG 0.713039 tig0000788:-64424 Msa1335980:CDS
CTTGGTCAGAGATAAACATG+AGG 0.717706 tig0000788:-61449 Msa1335980:CDS
CTAGCGTGTGGAGATCTACG+TGG 0.721092 tig0000788:-63984 Msa1335980:CDS
TAAGGCTGATGATTCCTCAG+CGG 0.730278 tig0000788:-60146 Msa1335980:CDS
AGCCTTAGTTTCCAACACGG+GGG 0.749801 tig0000788:+60162 None:intergenic
GAAATAGATACATCTGAACG+AGG 0.760834 tig0000788:+59034 None:intergenic
GCTAAATTATGTGAGGCTGG+AGG 0.783887 tig0000788:-66691 Msa1335980:CDS
CAGGTGGTGAAAATTCCATG+TGG 0.823557 tig0000788:-63309 Msa1335980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAATATAATAAATTGAAT+GGG + tig0000788:63912-63931 None:intergenic 10.0%
!! TTATTTATATTGAAAATTGA+GGG + tig0000788:64166-64185 None:intergenic 10.0%
!!! AAAATTTCATTGTTATTTTT+CGG - tig0000788:64733-64752 Msa1335980:intron 10.0%
!! AAATTTGAAAATTGAAAAAT+AGG - tig0000788:64787-64806 Msa1335980:intron 10.0%
!! ATGATAATAATAAAGAAATA+TGG + tig0000788:64859-64878 None:intergenic 10.0%
!!! AATTATGAATTTTCAATAAA+TGG - tig0000788:66691-66710 Msa1335980:CDS 10.0%
!!! ATTCTAGTATATATTTTAAA+AGG + tig0000788:68906-68925 None:intergenic 10.0%
!!! ACTTTTATTTTATTTTATGA+AGG - tig0000788:70075-70094 Msa1335980:intron 10.0%
!!! TTTTAAATCAGAATAATTTA+TGG - tig0000788:70442-70461 Msa1335980:intron 10.0%
!!! AATTTGACAACAATTTTAAA+TGG + tig0000788:59610-59629 None:intergenic 15.0%
!! TAAAGTAATTAAACGAAAAT+CGG + tig0000788:60468-60487 None:intergenic 15.0%
!!! TTTAATTACTTTAAAGAGTT+TGG - tig0000788:60475-60494 Msa1335980:CDS 15.0%
!! ACTAAAAGATAATATATATG+AGG - tig0000788:60593-60612 Msa1335980:intron 15.0%
!! CACAAAAAATAATTAGAAAA+GGG + tig0000788:61716-61735 None:intergenic 15.0%
!! ATATCATTTCTTAATGTTAT+TGG - tig0000788:62080-62099 Msa1335980:CDS 15.0%
!! CAAAAAAATAAGATAAATAC+CGG - tig0000788:63555-63574 Msa1335980:CDS 15.0%
!! GTAATATAATAAATTGAATG+GGG + tig0000788:63911-63930 None:intergenic 15.0%
!! CAGTAATATAATAAATTGAA+TGG + tig0000788:63913-63932 None:intergenic 15.0%
!! GTTATTTATATTGAAAATTG+AGG + tig0000788:64167-64186 None:intergenic 15.0%
!! TTACAAAAAAAGTTGTTTAA+GGG + tig0000788:64348-64367 None:intergenic 15.0%
!! ATTACAAAAAAAGTTGTTTA+AGG + tig0000788:64349-64368 None:intergenic 15.0%
!!! TTTTTGTTATATTGTTAGTT+TGG - tig0000788:64415-64434 Msa1335980:CDS 15.0%
!! AAAAAAAGATTTAGAAATGA+AGG + tig0000788:64697-64716 None:intergenic 15.0%
!!! CATTTCTAAATCTTTTTTTT+TGG - tig0000788:64698-64717 Msa1335980:intron 15.0%
!! TATATAAATGTGACAAAATT+TGG - tig0000788:64761-64780 Msa1335980:intron 15.0%
!! ATATAAATGTGACAAAATTT+GGG - tig0000788:64762-64781 Msa1335980:intron 15.0%
!! ACAAGATAAAAAAGTAAAAA+GGG + tig0000788:65273-65292 None:intergenic 15.0%
!! AACAAGATAAAAAAGTAAAA+AGG + tig0000788:65274-65293 None:intergenic 15.0%
!!! TTTTTACTTTTTTATCTTGT+TGG - tig0000788:65273-65292 Msa1335980:intron 15.0%
!!! TTTTACTTTTTTATCTTGTT+GGG - tig0000788:65274-65293 Msa1335980:intron 15.0%
!!! AAAAGAAGTTTTTGTTAAAA+TGG + tig0000788:65357-65376 None:intergenic 15.0%
!!! CAAAATTAAAAACAGTTTTA+GGG + tig0000788:65439-65458 None:intergenic 15.0%
!! ATAAGTCAGTTAAAATTAAA+AGG + tig0000788:65463-65482 None:intergenic 15.0%
!!! AACTGACTTATAATTTAAAA+AGG - tig0000788:65472-65491 Msa1335980:intron 15.0%
!!! ACTGACTTATAATTTAAAAA+GGG - tig0000788:65473-65492 Msa1335980:intron 15.0%
!! ATATTCATAACTTTAATTGA+TGG + tig0000788:65836-65855 None:intergenic 15.0%
!! ATATACTAGAATAAATTTAG+AGG - tig0000788:68914-68933 Msa1335980:CDS 15.0%
!!! AAAACAATAAATATCGATTA+TGG - tig0000788:69569-69588 Msa1335980:intron 15.0%
!!! AAACAATAAATATCGATTAT+GGG - tig0000788:69570-69589 Msa1335980:intron 15.0%
!! AGTAAATGAAAAAAATTAGT+GGG + tig0000788:69850-69869 None:intergenic 15.0%
!! AAGTAAATGAAAAAAATTAG+TGG + tig0000788:69851-69870 None:intergenic 15.0%
!!! TTTATCATTTTATCATAACA+AGG + tig0000788:69931-69950 None:intergenic 15.0%
!! TATATTTATGAAAGAAAGTT+TGG - tig0000788:70032-70051 Msa1335980:intron 15.0%
!!! TTCATTTGCTTCATAATTTT+AGG - tig0000788:59104-59123 Msa1335980:three_prime_UTR 20.0%
!! GTCAAAATAAGAGAATAATT+TGG - tig0000788:59417-59436 Msa1335980:CDS 20.0%
!! AATACATGTTTAGTTACATT+TGG - tig0000788:59457-59476 Msa1335980:intron 20.0%
!! TATCTGATAATTGATACAAT+AGG + tig0000788:60738-60757 None:intergenic 20.0%
!!! ACATCAGAAACTATTTTTTT+AGG + tig0000788:60959-60978 None:intergenic 20.0%
!! GATAATTAGCATTAAAAATC+TGG + tig0000788:61158-61177 None:intergenic 20.0%
!!! TATCAATTATTTCTTTTCAC+TGG - tig0000788:61369-61388 Msa1335980:intron 20.0%
!! TAAATTCGTTCTTCAAAATA+TGG - tig0000788:61499-61518 Msa1335980:CDS 20.0%
!! GCACAAAAAATAATTAGAAA+AGG + tig0000788:61717-61736 None:intergenic 20.0%
!!! AAATGATATATTTTTGAGTC+AGG + tig0000788:62069-62088 None:intergenic 20.0%
!! TATATCTTCTAATTATTGTG+TGG - tig0000788:62254-62273 Msa1335980:intron 20.0%
!!! CTTTTTAATGAAATGTGTAT+TGG - tig0000788:62361-62380 Msa1335980:intron 20.0%
!! TTATAAGAAGTGACAAATTT+GGG + tig0000788:62430-62449 None:intergenic 20.0%
!! AAAAAGTTTGTAATGTTACA+GGG + tig0000788:62637-62656 None:intergenic 20.0%
!! TAAAAAGTTTGTAATGTTAC+AGG + tig0000788:62638-62657 None:intergenic 20.0%
!! TATTATCGAAAGATAAGATA+AGG + tig0000788:63117-63136 None:intergenic 20.0%
!!! CTTAATTTGTGATTTCTTTT+TGG - tig0000788:63645-63664 Msa1335980:intron 20.0%
!! AAAGTGCATCATTAATTTAA+TGG - tig0000788:63669-63688 Msa1335980:intron 20.0%
!! AAGTGCATCATTAATTTAAT+GGG - tig0000788:63670-63689 Msa1335980:intron 20.0%
!! TTTGTAATAAAGATTGTTGT+TGG - tig0000788:64361-64380 Msa1335980:CDS 20.0%
!! ATTTGTTTCCCTATTTAAAT+AGG - tig0000788:64880-64899 Msa1335980:intron 20.0%
!! AAAGATGAATAACTTGATTA+AGG + tig0000788:64969-64988 None:intergenic 20.0%
!!! TTTACTTTTTTATCTTGTTG+GGG - tig0000788:65275-65294 Msa1335980:intron 20.0%
!!! TTTTAATTGTGTATAAAGTC+AGG + tig0000788:65332-65351 None:intergenic 20.0%
!!! CAAAAACTTCTTTTATGTAA+AGG - tig0000788:65363-65382 Msa1335980:intron 20.0%
!!! CCAAAATTAAAAACAGTTTT+AGG + tig0000788:65440-65459 None:intergenic 20.0%
!!! CCTAAAACTGTTTTTAATTT+TGG - tig0000788:65437-65456 Msa1335980:intron 20.0%
!! TACAGTTAAATAAAAGGATT+TGG - tig0000788:66561-66580 Msa1335980:CDS 20.0%
!! TACTGAAGCAATAAAATAAA+GGG + tig0000788:67039-67058 None:intergenic 20.0%
!! TTACTGAAGCAATAAAATAA+AGG + tig0000788:67040-67059 None:intergenic 20.0%
!! TAATATATATACATAGACAC+TGG - tig0000788:67284-67303 Msa1335980:intron 20.0%
!! AGATATACAGAAAATAATGT+GGG - tig0000788:67957-67976 Msa1335980:intron 20.0%
!! TAAAATAAAAATTGATGCTG+AGG - tig0000788:68010-68029 Msa1335980:intron 20.0%
!! GTTTCAAATTATGAGTTATA+CGG + tig0000788:68182-68201 None:intergenic 20.0%
!!! TTCTATTTTGTATGTTTTTC+AGG - tig0000788:68207-68226 Msa1335980:intron 20.0%
!! AAAAAGTTCATAGAATTTGA+TGG + tig0000788:68329-68348 None:intergenic 20.0%
!! ACAATTTCATCTTTCAATTT+AGG + tig0000788:68715-68734 None:intergenic 20.0%
!!! ATGAAATTGTCTCAATATTT+TGG - tig0000788:68725-68744 Msa1335980:intron 20.0%
!! GTATTATAAAATAGTGTGAT+AGG - tig0000788:68788-68807 Msa1335980:intron 20.0%
!!! TATTTTAAAAGGTATGACAA+AGG + tig0000788:68895-68914 None:intergenic 20.0%
!! AAAAGAAACATATTAAAGCA+GGG + tig0000788:68970-68989 None:intergenic 20.0%
!!! AACAATAAATATCGATTATG+GGG - tig0000788:69571-69590 Msa1335980:intron 20.0%
!!! AAATTCTGAAAAATTTCCTT+CGG - tig0000788:69691-69710 Msa1335980:CDS 20.0%
!! TAAATCAGAATAATTTATGG+AGG - tig0000788:70445-70464 Msa1335980:intron 20.0%
!!! TTGCTTCATAATTTTAGGTT+TGG - tig0000788:59109-59128 Msa1335980:three_prime_UTR 25.0%
!!! TGCTTCATAATTTTAGGTTT+GGG - tig0000788:59110-59129 Msa1335980:three_prime_UTR 25.0%
!! GAAGATAATGAAATCGTTTT+CGG - tig0000788:59166-59185 Msa1335980:CDS 25.0%
! AGAAAAGAGTGAAAATGTTT+CGG - tig0000788:59255-59274 Msa1335980:intron 25.0%
! TGCTTACGATTAATTACATT+CGG - tig0000788:59493-59512 Msa1335980:intron 25.0%
! AATGAGTAACTATTTGTCAT+TGG - tig0000788:59927-59946 Msa1335980:CDS 25.0%
! GTTAATCACAATTATCATCT+TGG - tig0000788:60210-60229 Msa1335980:CDS 25.0%
!!! TGTTTTAAGTTCATGCATTA+AGG - tig0000788:60298-60317 Msa1335980:CDS 25.0%
! TGATTATACGTAGAAACTAA+AGG + tig0000788:60369-60388 None:intergenic 25.0%
!! TTACTTTAAAGAGTTTGGTT+CGG - tig0000788:60480-60499 Msa1335980:CDS 25.0%
! TTGAAGATTTATCATGTTGA+GGG + tig0000788:60530-60549 None:intergenic 25.0%
! CTGCATTATAAAAGTTATCA+TGG + tig0000788:60785-60804 None:intergenic 25.0%
! ATTATGTCCAAATAAGACAA+GGG + tig0000788:60867-60886 None:intergenic 25.0%
! TTTCATAAGCATGAAATGAA+TGG + tig0000788:60928-60947 None:intergenic 25.0%
!!! ATGATTTACCCATTTTTGTT+GGG + tig0000788:61035-61054 None:intergenic 25.0%
!!! AATGATTTACCCATTTTTGT+TGG + tig0000788:61036-61055 None:intergenic 25.0%
! AAAATTAACCACAATTTCAG+TGG - tig0000788:61563-61582 Msa1335980:CDS 25.0%
! TATATTATCCACTGAAATTG+TGG + tig0000788:61574-61593 None:intergenic 25.0%
! ATTGGCTATAATTTATTGTC+TGG - tig0000788:61910-61929 Msa1335980:CDS 25.0%
! ATCATCTTTAACATTCAGAA+AGG + tig0000788:62183-62202 None:intergenic 25.0%
! GTTATAAGAAGTGACAAATT+TGG + tig0000788:62431-62450 None:intergenic 25.0%
!! TAAATTTGATTAGCTCACTT+TGG - tig0000788:62608-62627 Msa1335980:intron 25.0%
!!! TATTACACATTTTGATAGTG+AGG + tig0000788:63252-63271 None:intergenic 25.0%
! ATGATGAATAAAAAGCAAAC+TGG + tig0000788:63476-63495 None:intergenic 25.0%
!! TTTTTCTTGTCTAATACTAC+CGG + tig0000788:63577-63596 None:intergenic 25.0%
! GCATATTAGTATTTCTCATT+TGG - tig0000788:63768-63787 Msa1335980:intron 25.0%
!! TTAACTTGGTATAATCTTGA+TGG + tig0000788:63802-63821 None:intergenic 25.0%
!! ATTGATGATTATGCTTAACT+TGG + tig0000788:63816-63835 None:intergenic 25.0%
! TTTGTTAGCGATATATTATG+CGG - tig0000788:63838-63857 Msa1335980:CDS 25.0%
! TAACGTTTGAAAGTTATGAA+CGG + tig0000788:64508-64527 None:intergenic 25.0%
! TATAATTACTAGCGAAAAGA+CGG + tig0000788:64569-64588 None:intergenic 25.0%
! TGAAAATTGAAAAATAGGCT+TGG - tig0000788:64792-64811 Msa1335980:intron 25.0%
! CTGCAAATCCTATTTAAATA+GGG + tig0000788:64891-64910 None:intergenic 25.0%
! ACTGCAAATCCTATTTAAAT+AGG + tig0000788:64892-64911 None:intergenic 25.0%
!!! AATGTATTTTTGCCATTCTT+TGG - tig0000788:65049-65068 Msa1335980:intron 25.0%
!!! TTACTTTTTTATCTTGTTGG+GGG - tig0000788:65276-65295 Msa1335980:intron 25.0%
!! AACTTCTTTTATGTAAAGGT+CGG - tig0000788:65367-65386 Msa1335980:intron 25.0%
! TTTAAAAAGGGAATCTCATT+TGG - tig0000788:65485-65504 Msa1335980:intron 25.0%
!!! ACACCTTTAAAATGATTTAC+TGG + tig0000788:65631-65650 None:intergenic 25.0%
!!! AATCATTTTAAAGGTGTTCA+CGG - tig0000788:65634-65653 Msa1335980:intron 25.0%
! CATGAATAAAAGTCAACAAT+TGG + tig0000788:65873-65892 None:intergenic 25.0%
! AATGCAGAATTTGCAATTTA+CGG - tig0000788:65942-65961 Msa1335980:intron 25.0%
! GAATTTAGTCAATGAGAATA+AGG - tig0000788:66083-66102 Msa1335980:intron 25.0%
! TCTTCCAAAAATTCTTTAGA+GGG - tig0000788:66414-66433 Msa1335980:intron 25.0%
! ACGACTATAATTCATATTTG+AGG - tig0000788:66437-66456 Msa1335980:CDS 25.0%
!!! TCATTATATGCATTTGGTTT+TGG - tig0000788:66460-66479 Msa1335980:CDS 25.0%
! AATTCCATACAATTGCTTTA+AGG - tig0000788:66493-66512 Msa1335980:CDS 25.0%
!! TGATTGGTTAAACCTAATAA+TGG - tig0000788:66526-66545 Msa1335980:CDS 25.0%
!! GATTGGTTAAACCTAATAAT+GGG - tig0000788:66527-66546 Msa1335980:CDS 25.0%
! ATTGGTTAAACCTAATAATG+GGG - tig0000788:66528-66547 Msa1335980:CDS 25.0%
!!! TCCTTTTATTTAACTGTATC+CGG + tig0000788:66559-66578 None:intergenic 25.0%
!!! TTCTAGCTTCTTTAAATTCA+CGG + tig0000788:66789-66808 None:intergenic 25.0%
! GGAGATTAACAATAAGTATA+CGG + tig0000788:67018-67037 None:intergenic 25.0%
!! ATTTTATTGCTTCAGTAACA+TGG - tig0000788:67042-67061 Msa1335980:CDS 25.0%
!! TTTTATTGCTTCAGTAACAT+GGG - tig0000788:67043-67062 Msa1335980:CDS 25.0%
! TTATTTCATCCTGTAAAAGT+TGG + tig0000788:67267-67286 None:intergenic 25.0%
! ACTGGATTAATAATAACGTT+GGG - tig0000788:67302-67321 Msa1335980:intron 25.0%
!! CATCATTTTCTAAATCAAGT+TGG - tig0000788:67428-67447 Msa1335980:intron 25.0%
! CAGATATACAGAAAATAATG+TGG - tig0000788:67956-67975 Msa1335980:intron 25.0%
! GATATACAGAAAATAATGTG+GGG - tig0000788:67958-67977 Msa1335980:intron 25.0%
! TTACCGAATATCACAATTAA+TGG - tig0000788:68651-68670 Msa1335980:CDS 25.0%
! TCACCATTAATTGTGATATT+CGG + tig0000788:68657-68676 None:intergenic 25.0%
!! CTATTTTATAATACGATCCT+TGG + tig0000788:68782-68801 None:intergenic 25.0%
! CAAAAGAAACATATTAAAGC+AGG + tig0000788:68971-68990 None:intergenic 25.0%
! AATGTTTACATTGTGATTAG+CGG - tig0000788:69011-69030 Msa1335980:CDS 25.0%
! TTGTTGTCTTCAGATTTATT+TGG + tig0000788:69302-69321 None:intergenic 25.0%
! TAAATCTGAAGACAACAATA+TGG - tig0000788:69304-69323 Msa1335980:intron 25.0%
!!! ATTGGTGAACATTTTTCAAA+AGG + tig0000788:69421-69440 None:intergenic 25.0%
!!! TCTGCTATGATTTTGAAAAT+TGG + tig0000788:69651-69670 None:intergenic 25.0%
! ATTATTGACACACAAAAAGT+AGG + tig0000788:69769-69788 None:intergenic 25.0%
! ATTTGATAAAGTGGTTCAAA+TGG + tig0000788:69980-69999 None:intergenic 25.0%
!!! TTTTATTTTATGAAGGTGTC+TGG - tig0000788:70082-70101 Msa1335980:intron 25.0%
!! TTTCTAGTATATTGGCAAAA+TGG - tig0000788:70526-70545 Msa1335980:CDS 25.0%
!!! CATAATTTTAGGTTTGGGTT+CGG - tig0000788:59115-59134 Msa1335980:exon 30.0%
TTGTTGTACGACTTAGAATT+TGG - tig0000788:59143-59162 Msa1335980:CDS 30.0%
TGTTGTACGACTTAGAATTT+GGG - tig0000788:59144-59163 Msa1335980:CDS 30.0%
AAATGGATCAATGTTAACTG+TGG + tig0000788:59311-59330 None:intergenic 30.0%
AGTGAATATTATTCACCTTG+AGG + tig0000788:59373-59392 None:intergenic 30.0%
ACATGTTTAGTTACATTTGG+TGG - tig0000788:59460-59479 Msa1335980:intron 30.0%
TGACAATTCAGTTTGCATAT+GGG - tig0000788:59799-59818 Msa1335980:intron 30.0%
! TTGGTTTCAATTTTACTGCA+TGG - tig0000788:59865-59884 Msa1335980:CDS 30.0%
AGTAACTATTTGTCATTGGA+TGG - tig0000788:59931-59950 Msa1335980:CDS 30.0%
GTAACTATTTGTCATTGGAT+GGG - tig0000788:59932-59951 Msa1335980:CDS 30.0%
TACCTCGTTAAATATTGTAC+CGG + tig0000788:60028-60047 None:intergenic 30.0%
GTACAATATTTAACGAGGTA+AGG - tig0000788:60028-60047 Msa1335980:CDS 30.0%
AATCACAATTATCATCTTGG+TGG - tig0000788:60213-60232 Msa1335980:CDS 30.0%
ATGCATGAACTTAAAACAGA+GGG + tig0000788:60296-60315 None:intergenic 30.0%
AATGCATGAACTTAAAACAG+AGG + tig0000788:60297-60316 None:intergenic 30.0%
! AGAAACTAAAGGTAGAGTTT+TGG + tig0000788:60358-60377 None:intergenic 30.0%
GTAATTAAACGAAAATCGGA+AGG + tig0000788:60464-60483 None:intergenic 30.0%
! TACTTTAAAGAGTTTGGTTC+GGG - tig0000788:60481-60500 Msa1335980:CDS 30.0%
TGAAGATTTATCATGTTGAG+GGG + tig0000788:60529-60548 None:intergenic 30.0%
GTTGAAGATTTATCATGTTG+AGG + tig0000788:60531-60550 None:intergenic 30.0%
TTGAAAATCTAACTCACCTA+CGG + tig0000788:60713-60732 None:intergenic 30.0%
CATTATGTCCAAATAAGACA+AGG + tig0000788:60868-60887 None:intergenic 30.0%
! TTTTACCACCCAACAAAAAT+GGG - tig0000788:61024-61043 Msa1335980:intron 30.0%
TAGCATTAAAAATCTGGTCT+TGG + tig0000788:61152-61171 None:intergenic 30.0%
ATGCTAATTATCTCCCTTAT+TGG - tig0000788:61166-61185 Msa1335980:intron 30.0%
GTCTATTAATTGAAGTTCTG+TGG - tig0000788:61871-61890 Msa1335980:CDS 30.0%
ATATGTTATCTTGAGTCTCT+TGG - tig0000788:61990-62009 Msa1335980:intron 30.0%
!! TTTTGAGTCAGGTCTTTTAA+GGG + tig0000788:62058-62077 None:intergenic 30.0%
!!! TTTTTGAGTCAGGTCTTTTA+AGG + tig0000788:62059-62078 None:intergenic 30.0%
CAATATGCTCCAACATATTA+GGG + tig0000788:62565-62584 None:intergenic 30.0%
! AACACAACTGACTTAGATAA+TGG + tig0000788:62676-62695 None:intergenic 30.0%
TACTTATTGGTGCAAATCTT+TGG - tig0000788:63073-63092 Msa1335980:intron 30.0%
ACTTATTGGTGCAAATCTTT+GGG - tig0000788:63074-63093 Msa1335980:intron 30.0%
AACACACTCAGTATATGATT+TGG - tig0000788:63595-63614 Msa1335980:CDS 30.0%
ATCACAAATTAAGTATCCTG+TGG + tig0000788:63638-63657 None:intergenic 30.0%
!!! TTGAAAATTGAGGGCATTTT+TGG + tig0000788:64157-64176 None:intergenic 30.0%
! AGTTGTTTAAGGGTACAATT+GGG + tig0000788:64338-64357 None:intergenic 30.0%
! AAGTTGTTTAAGGGTACAAT+TGG + tig0000788:64339-64358 None:intergenic 30.0%
ATAATTACTAGCGAAAAGAC+GGG + tig0000788:64568-64587 None:intergenic 30.0%
TCTGACTATTAGATTGTGAA+GGG + tig0000788:65145-65164 None:intergenic 30.0%
TTCTGACTATTAGATTGTGA+AGG + tig0000788:65146-65165 None:intergenic 30.0%
GCAGAATTCATATCAAGTTA+TGG - tig0000788:65194-65213 Msa1335980:intron 30.0%
TCATATCAAGTTATGGAATG+CGG - tig0000788:65201-65220 Msa1335980:intron 30.0%
TTAGTTGTTGAACAATGTCA+GGG + tig0000788:65393-65412 None:intergenic 30.0%
ATTAGTTGTTGAACAATGTC+AGG + tig0000788:65394-65413 None:intergenic 30.0%
TTGTTCAACAACTAATTGTG+AGG - tig0000788:65398-65417 Msa1335980:intron 30.0%
!! CCTTTAAAATGATTTACTGG+CGG + tig0000788:65628-65647 None:intergenic 30.0%
!!! ATCATTTTAAAGGTGTTCAC+GGG - tig0000788:65635-65654 Msa1335980:intron 30.0%
CCAATCTTATCTCAATTTGA+AGG + tig0000788:65742-65761 None:intergenic 30.0%
CCTTCAAATTGAGATAAGAT+TGG - tig0000788:65739-65758 Msa1335980:intron 30.0%
! ACTTTTATTCATGTTCAGAC+TGG - tig0000788:65880-65899 Msa1335980:intron 30.0%
! ATATGCTATCTGGAATATGA+TGG - tig0000788:65916-65935 Msa1335980:intron 30.0%
! TATGCTATCTGGAATATGAT+GGG - tig0000788:65917-65936 Msa1335980:intron 30.0%
ATGCAGAATTTGCAATTTAC+GGG - tig0000788:65943-65962 Msa1335980:intron 30.0%
!! TGTTTCTGTTGATAACAACT+CGG - tig0000788:66002-66021 Msa1335980:intron 30.0%
CATCTGTAGATTTCATAGTA+TGG - tig0000788:66061-66080 Msa1335980:intron 30.0%
!! GAACTGTTTTGCTTTTGTTA+AGG - tig0000788:66281-66300 Msa1335980:intron 30.0%
! GGTGTCATATGATTTATGAT+AGG + tig0000788:66371-66390 None:intergenic 30.0%
CTCTTCCAAAAATTCTTTAG+AGG - tig0000788:66413-66432 Msa1335980:intron 30.0%
TTGAGGTCATTATATGCATT+TGG - tig0000788:66454-66473 Msa1335980:CDS 30.0%
GTTTAACCAATCAAAAAGTG+AGG + tig0000788:66519-66538 None:intergenic 30.0%
ACCGGATACAGTTAAATAAA+AGG - tig0000788:66555-66574 Msa1335980:CDS 30.0%
!! ATAACCGTCGATTTAAAAAC+CGG - tig0000788:66634-66653 Msa1335980:CDS 30.0%
! TATTTTACCACAATCTCAAC+CGG + tig0000788:66656-66675 None:intergenic 30.0%
AACTAAACACGTCATAAATC+TGG + tig0000788:66725-66744 None:intergenic 30.0%
! TGTTTAACTGACTTTGATTG+AGG + tig0000788:66910-66929 None:intergenic 30.0%
TCTAATAAAAAGGTGGGTAT+TGG + tig0000788:67165-67184 None:intergenic 30.0%
! AAAGTTGGAATGATTTGTGA+TGG + tig0000788:67252-67271 None:intergenic 30.0%
! CAAATCATTCCAACTTTTAC+AGG - tig0000788:67255-67274 Msa1335980:intron 30.0%
CACTGGATTAATAATAACGT+TGG - tig0000788:67301-67320 Msa1335980:intron 30.0%
ATTGCATATGCAAACTTAGA+GGG + tig0000788:67336-67355 None:intergenic 30.0%
AATTGCATATGCAAACTTAG+AGG + tig0000788:67337-67356 None:intergenic 30.0%
! TGTGTCTGTTTGTTTGATTT+AGG - tig0000788:67553-67572 Msa1335980:intron 30.0%
TGTGTACTTGAATATTTGGT+TGG + tig0000788:67936-67955 None:intergenic 30.0%
TCTGTGTGTACTTGAATATT+TGG + tig0000788:67940-67959 None:intergenic 30.0%
! TAATTTTACCCTTTCGCTTA+TGG - tig0000788:68288-68307 Msa1335980:intron 30.0%
TGTTAATACCATAAGCGAAA+GGG + tig0000788:68299-68318 None:intergenic 30.0%
TTGTTAATACCATAAGCGAA+AGG + tig0000788:68300-68319 None:intergenic 30.0%
AAACCTGTCATCAAGTAAAA+GGG + tig0000788:68395-68414 None:intergenic 30.0%
TGCATTACTTGTTCCTTTAT+TGG - tig0000788:68420-68439 Msa1335980:intron 30.0%
CTCATAACCAATCACTTAAA+TGG + tig0000788:68514-68533 None:intergenic 30.0%
TATGAAAAGAAGGGATTAAG+TGG + tig0000788:68546-68565 None:intergenic 30.0%
! CTTAATCCCTTCTTTTCATA+TGG - tig0000788:68546-68565 Msa1335980:intron 30.0%
CTACATCCATATGAAAAGAA+GGG + tig0000788:68555-68574 None:intergenic 30.0%
TCTACATCCATATGAAAAGA+AGG + tig0000788:68556-68575 None:intergenic 30.0%
TAATTGTGATATTCGGTAAC+AGG + tig0000788:68650-68669 None:intergenic 30.0%
!!! TTTTGGTTTACTTATGATCG+TGG - tig0000788:68742-68761 Msa1335980:intron 30.0%
! TTTGGTTTACTTATGATCGT+GGG - tig0000788:68743-68762 Msa1335980:intron 30.0%
ATCTTTCGTTTCATATACTG+AGG + tig0000788:68845-68864 None:intergenic 30.0%
TTTGCAGATAACATCAAAGT+TGG - tig0000788:68987-69006 Msa1335980:CDS 30.0%
TGTAGTAGAATTGATGCTTT+CGG + tig0000788:69261-69280 None:intergenic 30.0%
!! ACATTTTTCAAAAGGTGTAG+AGG + tig0000788:69413-69432 None:intergenic 30.0%
TTGAAAAATGTTCACCAATC+TGG - tig0000788:69422-69441 Msa1335980:intron 30.0%
ACACAAAAAGTAGGTAGATA+GGG + tig0000788:69760-69779 None:intergenic 30.0%
! ATAGGTTTAAGATTCTCAGT+GGG + tig0000788:69889-69908 None:intergenic 30.0%
TAAAGTGGTTCAAATGGATA+TGG + tig0000788:69974-69993 None:intergenic 30.0%
CTAGCTTCAATTTGATAAAG+TGG + tig0000788:69989-70008 None:intergenic 30.0%
ATCAAATTGAAGCTAGTGTA+TGG - tig0000788:69993-70012 Msa1335980:intron 30.0%
ATGTAGCAGGTGATTATTAT+AGG - tig0000788:70239-70258 Msa1335980:CDS 30.0%
TTATTATAGGAGTGAATGAC+TGG - tig0000788:70252-70271 Msa1335980:CDS 30.0%
TATTATAGGAGTGAATGACT+GGG - tig0000788:70253-70272 Msa1335980:CDS 30.0%
ATTTCTAAATCTAATCCTGC+TGG - tig0000788:70500-70519 Msa1335980:CDS 30.0%
ATATACTAGAAAATACCAGC+AGG + tig0000788:70518-70537 None:intergenic 30.0%
!! GCTGGTATTTTCTAGTATAT+TGG - tig0000788:70518-70537 Msa1335980:CDS 30.0%
AAGTGAAAAAGAAGCAGCAA+TGG - tig0000788:58898-58917 Msa1335980:three_prime_UTR 35.0%
AGTAGAAGAAAACGAGATAC+CGG + tig0000788:59041-59060 None:intergenic 35.0%
! AAATCGTTTTCGGTTTTCGA+TGG - tig0000788:59176-59195 Msa1335980:CDS 35.0%
GAATCTGTGATTGTAGTGTT+TGG - tig0000788:59230-59249 Msa1335980:intron 35.0%
TCGTTTGAAAATGACGAGTT+TGG - tig0000788:59281-59300 Msa1335980:intron 35.0%
CGTTTGAAAATGACGAGTTT+GGG - tig0000788:59282-59301 Msa1335980:intron 35.0%
AAAACCCAATGACCAAACTT+GGG + tig0000788:59338-59357 None:intergenic 35.0%
!! GAGAGTGATTTTCTTGCTAT+AGG - tig0000788:59770-59789 Msa1335980:intron 35.0%
GTGACAATTCAGTTTGCATA+TGG - tig0000788:59798-59817 Msa1335980:intron 35.0%
GGACATTTCCAATTCTAATG+CGG - tig0000788:59820-59839 Msa1335980:CDS 35.0%
CTTAAGAACCGCATTAGAAT+TGG + tig0000788:59831-59850 None:intergenic 35.0%
CAATTCTAATGCGGTTCTTA+AGG - tig0000788:59829-59848 Msa1335980:CDS 35.0%
CAGTAAAATTGAAACCAACC+TGG + tig0000788:59863-59882 None:intergenic 35.0%
! TCAATTTTACTGCATGGCAT+TGG - tig0000788:59871-59890 Msa1335980:CDS 35.0%
ATAACCGCATTGAGTACAAA+AGG + tig0000788:59972-59991 None:intergenic 35.0%
! TTTTGTACTCAATGCGGTTA+TGG - tig0000788:59971-59990 Msa1335980:CDS 35.0%
TTTGTACTCAATGCGGTTAT+GGG - tig0000788:59972-59991 Msa1335980:CDS 35.0%
ATATTGTACCGGATGCAATA+TGG + tig0000788:60017-60036 None:intergenic 35.0%
ATCCGGTACAATATTTAACG+AGG - tig0000788:60023-60042 Msa1335980:CDS 35.0%
GGAAGTCAAAAGTTATTCTG+GGG + tig0000788:60146-60165 None:intergenic 35.0%
CGGAAGTCAAAAGTTATTCT+GGG + tig0000788:60147-60166 None:intergenic 35.0%
!!! AGTGTGGTTTTAAAAGTCTG+CGG + tig0000788:60167-60186 None:intergenic 35.0%
!! GCTTTAGTATTTCTGAAGTG+TGG + tig0000788:60183-60202 None:intergenic 35.0%
ATTAAACGAAAATCGGAAGG+TGG + tig0000788:60461-60480 None:intergenic 35.0%
TGTTCACGTATGTAAACTTG+TGG - tig0000788:60617-60636 Msa1335980:intron 35.0%
GTTCACGTATGTAAACTTGT+GGG - tig0000788:60618-60637 Msa1335980:intron 35.0%
AATGAATCTTCCCTTTCAGT+AGG + tig0000788:60827-60846 None:intergenic 35.0%
! CTTTTACCACCCAACAAAAA+TGG - tig0000788:61023-61042 Msa1335980:intron 35.0%
!! ATTTACCCATTTTTGTTGGG+TGG + tig0000788:61032-61051 None:intergenic 35.0%
GATAAGATCTGTCTATAGAG+AGG + tig0000788:61128-61147 None:intergenic 35.0%
! CTTAGCCACTTCTATTTTGT+TGG - tig0000788:61213-61232 Msa1335980:intron 35.0%
GTGATCCAACAAAATAGAAG+TGG + tig0000788:61221-61240 None:intergenic 35.0%
TCAACATTTATGCAGTGTCT+CGG + tig0000788:61276-61295 None:intergenic 35.0%
! TGATTTAAGTTAGCAGCACA+TGG + tig0000788:61326-61345 None:intergenic 35.0%
AGGATTGTACATGTCGTATA+TGG - tig0000788:61758-61777 Msa1335980:CDS 35.0%
GGATTGTACATGTCGTATAT+GGG - tig0000788:61759-61778 Msa1335980:CDS 35.0%
GATTGTACATGTCGTATATG+GGG - tig0000788:61760-61779 Msa1335980:CDS 35.0%
!! GCACATGTAAGTTCTAGATA+TGG - tig0000788:61816-61835 Msa1335980:CDS 35.0%
GGATCTGATCGAATAAACAT+TGG - tig0000788:61892-61911 Msa1335980:CDS 35.0%
CATGTGAACTTAGTATCTAC+AGG - tig0000788:61952-61971 Msa1335980:intron 35.0%
!! TTTTAAGGGGGGTAAACATA+AGG + tig0000788:62044-62063 None:intergenic 35.0%
! TTTGAGTCAGGTCTTTTAAG+GGG + tig0000788:62057-62076 None:intergenic 35.0%
!! CGCTTTAATTTTGCTGTATG+AGG - tig0000788:62114-62133 Msa1335980:CDS 35.0%
GCTGTATGAGGTTTAAATGA+CGG - tig0000788:62126-62145 Msa1335980:CDS 35.0%
CTGTATGAGGTTTAAATGAC+GGG - tig0000788:62127-62146 Msa1335980:CDS 35.0%
TGTATGAGGTTTAAATGACG+GGG - tig0000788:62128-62147 Msa1335980:CDS 35.0%
!! CTCAAGTTGTTTTCTCTGTT+AGG - tig0000788:62310-62329 Msa1335980:intron 35.0%
!! GTATTGGTTTCTATGTACAG+AGG - tig0000788:62377-62396 Msa1335980:intron 35.0%
! TTGTCACTTCTTATAACTGC+TGG - tig0000788:62434-62453 Msa1335980:intron 35.0%
! TGTCACTTCTTATAACTGCT+GGG - tig0000788:62435-62454 Msa1335980:intron 35.0%
CAACATATTAGGGATGCAAA+TGG + tig0000788:62555-62574 None:intergenic 35.0%
CATTTGCATCCCTAATATGT+TGG - tig0000788:62553-62572 Msa1335980:intron 35.0%
CCAATATGCTCCAACATATT+AGG + tig0000788:62566-62585 None:intergenic 35.0%
CCTAATATGTTGGAGCATAT+TGG - tig0000788:62563-62582 Msa1335980:intron 35.0%
CAACAAATAAGGAGGCAAAA+AGG + tig0000788:62720-62739 None:intergenic 35.0%
! TTGTTTGCGTTTTTCATCTC+AGG - tig0000788:62761-62780 Msa1335980:intron 35.0%
! CTTTTTGTTGCTACCAATCA+CGG - tig0000788:62789-62808 Msa1335980:intron 35.0%
CTACCATGCTAAATTATGTG+AGG - tig0000788:62818-62837 Msa1335980:intron 35.0%
GTAAAGCTCAATCTAACTGT+AGG + tig0000788:63020-63039 None:intergenic 35.0%
CAGTTAGATTGAGCTTTACT+TGG - tig0000788:63021-63040 Msa1335980:intron 35.0%
TTGCACAACTTATCTATGTG+TGG + tig0000788:63175-63194 None:intergenic 35.0%
CATAATGGTGTGGATAACAA+CGG + tig0000788:63289-63308 None:intergenic 35.0%
!!! GGTCTATTTTTTTTTTCCCC+AGG + tig0000788:63317-63336 None:intergenic 35.0%
ACTTGAACTACACTAGCAAT+AGG + tig0000788:63338-63357 None:intergenic 35.0%
TCAAGTCATCTCTCTCTATT+TGG - tig0000788:63352-63371 Msa1335980:intron 35.0%
ACAAATTAAGTATCCTGTGG+TGG + tig0000788:63635-63654 None:intergenic 35.0%
! TTTTCGTTGAATTAGCACGA+AGG + tig0000788:63738-63757 None:intergenic 35.0%
AAACACACTCTTAGAGAATC+GGG + tig0000788:64607-64626 None:intergenic 35.0%
CAAACACACTCTTAGAGAAT+CGG + tig0000788:64608-64627 None:intergenic 35.0%
ATGATTGTGTCACCAAAGAA+TGG + tig0000788:65064-65083 None:intergenic 35.0%
TAATAGTCAGAACTCCATGA+GGG - tig0000788:65154-65173 Msa1335980:intron 35.0%
AATGTGTTTGGATGCATGTT+TGG - tig0000788:65226-65245 Msa1335980:intron 35.0%
GAATCTGGATATGTATTTGC+AGG - tig0000788:65507-65526 Msa1335980:intron 35.0%
GTTTCCTTTGCTAAAGAATC+TGG - tig0000788:65567-65586 Msa1335980:intron 35.0%
! CCGCCAGTAAATCATTTTAA+AGG - tig0000788:65625-65644 Msa1335980:intron 35.0%
GTCAACAATTGGAATTAGAG+TGG + tig0000788:65862-65881 None:intergenic 35.0%
AGATGGTTGTATATGCTATC+TGG - tig0000788:65906-65925 Msa1335980:intron 35.0%
! ATGCTATCTGGAATATGATG+GGG - tig0000788:65918-65937 Msa1335980:intron 35.0%
CATGTGCATATGGTATTATC+AGG - tig0000788:66188-66207 Msa1335980:intron 35.0%
TCACCTAGAAAATAGGAATG+AGG + tig0000788:66246-66265 None:intergenic 35.0%
TGGTACATCACCTAGAAAAT+AGG + tig0000788:66253-66272 None:intergenic 35.0%
!!! GTAACTTTTTCAGTATGAGC+AGG + tig0000788:66392-66411 None:intergenic 35.0%
!! TCGTCCCTCTAAAGAATTTT+TGG + tig0000788:66421-66440 None:intergenic 35.0%
!!! CATTTGGTTTTGGCTTGAAT+AGG - tig0000788:66470-66489 Msa1335980:CDS 35.0%
!!! TTAAGGCCTCACTTTTTGAT+TGG - tig0000788:66510-66529 Msa1335980:CDS 35.0%
!! TCAACCGGTTTTTAAATCGA+CGG + tig0000788:66641-66660 None:intergenic 35.0%
TTAAAAACCGGTTGAGATTG+TGG - tig0000788:66646-66665 Msa1335980:CDS 35.0%
!! AAGCTAGAAATCCTAGCTTT+TGG - tig0000788:66800-66819 Msa1335980:intron 35.0%
GGATTAAGTATCTGTTTCCA+CGG + tig0000788:66852-66871 None:intergenic 35.0%
!! ATTTGGTTGCTCTAAAGTGA+AGG + tig0000788:66887-66906 None:intergenic 35.0%
! ACTGACTTTGATTGAGGATT+TGG + tig0000788:66904-66923 None:intergenic 35.0%
GAAAACTGCACATATCAAGA+AGG + tig0000788:66939-66958 None:intergenic 35.0%
TTTCCATCCATACATATCCA+TGG - tig0000788:66971-66990 Msa1335980:CDS 35.0%
TTCCATCCATACATATCCAT+GGG - tig0000788:66972-66991 Msa1335980:CDS 35.0%
CTGGTGTCTAATAAAAAGGT+GGG + tig0000788:67171-67190 None:intergenic 35.0%
ACTGGTGTCTAATAAAAAGG+TGG + tig0000788:67172-67191 None:intergenic 35.0%
! AGGACTGGTGTCTAATAAAA+AGG + tig0000788:67175-67194 None:intergenic 35.0%
AGTTTGCATATGCAATTCCA+TGG - tig0000788:67340-67359 Msa1335980:intron 35.0%
GTTTGCATATGCAATTCCAT+GGG - tig0000788:67341-67360 Msa1335980:intron 35.0%
ATCTTCGTGTATAAAGCACA+AGG + tig0000788:67380-67399 None:intergenic 35.0%
ATACACGAAGATATGCTTCT+AGG - tig0000788:67388-67407 Msa1335980:intron 35.0%
!! AAATCAAGTTGGATTGCAAC+TGG - tig0000788:67439-67458 Msa1335980:intron 35.0%
ACACACATTAGGAGTTTATG+AGG + tig0000788:67538-67557 None:intergenic 35.0%
CAAACAAACAGACACACATT+AGG + tig0000788:67549-67568 None:intergenic 35.0%
!! TCCAACTTTACTGATTTCAG+TGG - tig0000788:67749-67768 Msa1335980:CDS 35.0%
!! CCAACTTTACTGATTTCAGT+GGG - tig0000788:67750-67769 Msa1335980:CDS 35.0%
ATAAAAATTGATGCTGAGGC+TGG - tig0000788:68014-68033 Msa1335980:intron 35.0%
! GCTTTTCTTGTTAAATGTGC+TGG - tig0000788:68116-68135 Msa1335980:intron 35.0%
CAGATGCTACAGTTATGTTA+CGG - tig0000788:68261-68280 Msa1335980:intron 35.0%
AGATGCTACAGTTATGTTAC+GGG - tig0000788:68262-68281 Msa1335980:intron 35.0%
!! TTTCCCTTTTACTTGATGAC+AGG - tig0000788:68389-68408 Msa1335980:intron 35.0%
CAAACCTGTCATCAAGTAAA+AGG + tig0000788:68396-68415 None:intergenic 35.0%
ATATGCTGCAATGACAAAAC+AGG + tig0000788:68448-68467 None:intergenic 35.0%
CCTTTATAAGGCTTACGTAA+GGG + tig0000788:68478-68497 None:intergenic 35.0%
ACCTTTATAAGGCTTACGTA+AGG + tig0000788:68479-68498 None:intergenic 35.0%
GTGCAAGACAAACCTTTATA+AGG + tig0000788:68490-68509 None:intergenic 35.0%
TTGCACTCCATTTAAGTGAT+TGG - tig0000788:68504-68523 Msa1335980:intron 35.0%
GCTCGTCTCTTCAAAATTTA+AGG - tig0000788:68615-68634 Msa1335980:intron 35.0%
CGTCTCTTCAAAATTTAAGG+CGG - tig0000788:68618-68637 Msa1335980:intron 35.0%
GTTTCATATACTGAGGAACA+AGG + tig0000788:68838-68857 None:intergenic 35.0%
TTAAAGCAGGGAAATAGATC+AGG + tig0000788:68958-68977 None:intergenic 35.0%
!!! TGATGGGAGTGTTACATTTT+GGG - tig0000788:69040-69059 Msa1335980:intron 35.0%
!! TTTAAGCAGTGGGTTATCAA+AGG - tig0000788:69190-69209 Msa1335980:intron 35.0%
GACTTCAAAAGCCAAAAACA+AGG - tig0000788:69235-69254 Msa1335980:intron 35.0%
AGCATCAATTCTACTACACA+TGG - tig0000788:69263-69282 Msa1335980:intron 35.0%
GCATCAATTCTACTACACAT+GGG - tig0000788:69264-69283 Msa1335980:intron 35.0%
! AGATTTATTTGGCACTGAAG+AGG + tig0000788:69291-69310 None:intergenic 35.0%
TATTTCACATATTTCCGCTG+AGG + tig0000788:69387-69406 None:intergenic 35.0%
CATGTTTCAGAGATAAAAGC+CGG - tig0000788:69458-69477 Msa1335980:intron 35.0%
ATGTTTCAGAGATAAAAGCC+GGG - tig0000788:69459-69478 Msa1335980:intron 35.0%
CACACAAAAAGTAGGTAGAT+AGG + tig0000788:69761-69780 None:intergenic 35.0%
GTGTGTCAATAATGAACAGT+CGG - tig0000788:69776-69795 Msa1335980:intron 35.0%
! GATAGGTTTAAGATTCTCAG+TGG + tig0000788:69890-69909 None:intergenic 35.0%
TTAAACCTATCATTCCCGAT+AGG - tig0000788:69899-69918 Msa1335980:intron 35.0%
ATAACAAGGATCAGTCCTAT+CGG + tig0000788:69917-69936 None:intergenic 35.0%
!!! ATTTTATGAAGGTGTCTGGA+CGG - tig0000788:70086-70105 Msa1335980:intron 35.0%
! CACGTTCTATTAGTTTACTC+TGG + tig0000788:70170-70189 None:intergenic 35.0%
ACACTTAATAGTTAGTGTGC+CGG - tig0000788:70191-70210 Msa1335980:CDS 35.0%
TTCTTTCTCTTAACACTTGC+TGG - tig0000788:70296-70315 Msa1335980:CDS 35.0%
GAAATAGATACATCTGAACG+AGG + tig0000788:70485-70504 None:intergenic 35.0%
TATATTGGCAAAATGGTCTG+TGG - tig0000788:70533-70552 Msa1335980:CDS 35.0%
! AGATTCCCAACAATTTTCAG+AGG + tig0000788:70569-70588 None:intergenic 35.0%
AGAAGAGGAAGAGAGTGATT+GGG + tig0000788:59013-59032 None:intergenic 40.0%
TAGAAGAGGAAGAGAGTGAT+TGG + tig0000788:59014-59033 None:intergenic 40.0%
! ATCCATTTGTTGCCCAAGTT+TGG - tig0000788:59323-59342 Msa1335980:CDS 40.0%
CAAAACCCAATGACCAAACT+TGG + tig0000788:59339-59358 None:intergenic 40.0%
! CAAGTTTGGTCATTGGGTTT+TGG - tig0000788:59337-59356 Msa1335980:CDS 40.0%
TTTGGATGTTTGCTTCCTCA+AGG - tig0000788:59355-59374 Msa1335980:CDS 40.0%
CTGTTTACCTTGTTCGAATG+TGG - tig0000788:59748-59767 Msa1335980:intron 40.0%
GTTCTTAAGGTTCAATCACC+AGG - tig0000788:59842-59861 Msa1335980:CDS 40.0%
TTAAGGTTCAATCACCAGGT+TGG - tig0000788:59846-59865 Msa1335980:CDS 40.0%
! GATGCCTTTTGTACTCAATG+CGG - tig0000788:59965-59984 Msa1335980:CDS 40.0%
TTGTACTCAATGCGGTTATG+GGG - tig0000788:59973-59992 Msa1335980:CDS 40.0%
GAAGTTCTCCATATTGCATC+CGG - tig0000788:60006-60025 Msa1335980:CDS 40.0%
GCGGAAGTCAAAAGTTATTC+TGG + tig0000788:60148-60167 None:intergenic 40.0%
AATTAGATCCCTGACAGTCA+TGG + tig0000788:60566-60585 None:intergenic 40.0%
TGTAAACTTGTGGGACATGA+AGG - tig0000788:60627-60646 Msa1335980:intron 40.0%
GTTCAATCTTCCGAATAGCA+TGG - tig0000788:60649-60668 Msa1335980:intron 40.0%
CCAAATAAGACAAGGGCAAT+GGG + tig0000788:60860-60879 None:intergenic 40.0%
TCCAAATAAGACAAGGGCAA+TGG + tig0000788:60861-60880 None:intergenic 40.0%
TTGGACATAATGCTCGAGTT+TGG - tig0000788:60876-60895 Msa1335980:intron 40.0%
TGGACATAATGCTCGAGTTT+GGG - tig0000788:60877-60896 Msa1335980:intron 40.0%
GATGAAAGCAGCACCAATAA+GGG + tig0000788:61182-61201 None:intergenic 40.0%
TGATGAAAGCAGCACCAATA+AGG + tig0000788:61183-61202 None:intergenic 40.0%
! GCTGCTTTCATCAAGATAAG+TGG - tig0000788:61190-61209 Msa1335980:intron 40.0%
GTTTATTGTCACTGTCAGTG+AGG - tig0000788:61738-61757 Msa1335980:CDS 40.0%
TGTCGTATATGGGGAATTGA+TGG - tig0000788:61769-61788 Msa1335980:CDS 40.0%
!! TTGAGTCAGGTCTTTTAAGG+GGG + tig0000788:62056-62075 None:intergenic 40.0%
TGGTTTCTATGTACAGAGGT+AGG - tig0000788:62381-62400 Msa1335980:intron 40.0%
GGTTTCTATGTACAGAGGTA+GGG - tig0000788:62382-62401 Msa1335980:intron 40.0%
GTTTCTATGTACAGAGGTAG+GGG - tig0000788:62383-62402 Msa1335980:intron 40.0%
AAAACATCTCTGTTCTTCCG+GGG + tig0000788:62532-62551 None:intergenic 40.0%
GAAAACATCTCTGTTCTTCC+GGG + tig0000788:62533-62552 None:intergenic 40.0%
GGAAAACATCTCTGTTCTTC+CGG + tig0000788:62534-62553 None:intergenic 40.0%
AGCATATTGGATTGACAGAC+AGG - tig0000788:62576-62595 Msa1335980:intron 40.0%
TATTGGATTGACAGACAGGT+AGG - tig0000788:62580-62599 Msa1335980:intron 40.0%
TTTGCCATATCCATGTTGAC+TGG - tig0000788:62694-62713 Msa1335980:intron 40.0%
TCTTGCTGCAACAAATAAGG+AGG + tig0000788:62728-62747 None:intergenic 40.0%
CACTCTTGCTGCAACAAATA+AGG + tig0000788:62731-62750 None:intergenic 40.0%
ATGGTAGAGATAACCGTGAT+TGG + tig0000788:62805-62824 None:intergenic 40.0%
CAGCCTCACATAATTTAGCA+TGG + tig0000788:62824-62843 None:intergenic 40.0%
CATGCTAAATTATGTGAGGC+TGG - tig0000788:62822-62841 Msa1335980:intron 40.0%
CTGCATGGATTTATTGTCCA+AGG - tig0000788:62896-62915 Msa1335980:intron 40.0%
TCCAAGGACTCATTTGAACA+AGG - tig0000788:62912-62931 Msa1335980:intron 40.0%
TCCTTGTTCAAATGAGTCCT+TGG + tig0000788:62916-62935 None:intergenic 40.0%
GACTCATTTGAACAAGGATG+TGG - tig0000788:62918-62937 Msa1335980:intron 40.0%
ATTTCCTTTACCATCTCCGA+TGG + tig0000788:62961-62980 None:intergenic 40.0%
CTTTACTTGGCAAGCTGAAA+TGG - tig0000788:63034-63053 Msa1335980:intron 40.0%
GGCAGTGGGTAAAAAAGAAT+TGG + tig0000788:63214-63233 None:intergenic 40.0%
!!! CACATTTTGATAGTGAGGAC+AGG + tig0000788:63247-63266 None:intergenic 40.0%
AGCACGAAGGTCATTTAATC+TGG + tig0000788:63725-63744 None:intergenic 40.0%
TATTATGCGGCGCAATCAAA+TGG - tig0000788:63851-63870 Msa1335980:CDS 40.0%
ATTATGCGGCGCAATCAAAT+GGG - tig0000788:63852-63871 Msa1335980:CDS 40.0%
! ATAACCCCTTTGAGCTCTTT+TGG - tig0000788:64114-64133 Msa1335980:intron 40.0%
! TAACCCCTTTGAGCTCTTTT+GGG - tig0000788:64115-64134 Msa1335980:intron 40.0%
CGTTAGCGCAATAAAAAGAG+CGG - tig0000788:64523-64542 Msa1335980:intron 40.0%
! CGATTCTCTAAGAGTGTGTT+TGG - tig0000788:64606-64625 Msa1335980:intron 40.0%
! TCTCTAAGAGTGTGTTTGGA+TGG - tig0000788:64610-64629 Msa1335980:intron 40.0%
! CTTTGGTGACACAATCATGT+AGG - tig0000788:65066-65085 Msa1335980:intron 40.0%
CTATTAGATTGTGAAGGGTC+AGG + tig0000788:65140-65159 None:intergenic 40.0%
CTAATAGTCAGAACTCCATG+AGG - tig0000788:65153-65172 Msa1335980:intron 40.0%
ATGTGACACAATATCCCTCA+TGG + tig0000788:65171-65190 None:intergenic 40.0%
TGGAATGCGGATAATGTGTT+TGG - tig0000788:65214-65233 Msa1335980:intron 40.0%
!! TGTTGGGGGTTAGTTATGTT+CGG - tig0000788:65290-65309 Msa1335980:intron 40.0%
! AGGGAATCTCATTTGGAATC+TGG - tig0000788:65492-65511 Msa1335980:intron 40.0%
TGGAGATCTACGTGGAAATA+TGG - tig0000788:65540-65559 Msa1335980:intron 40.0%
AGCACCAGATTCTTTAGCAA+AGG + tig0000788:65574-65593 None:intergenic 40.0%
TTGCTAAAGAATCTGGTGCT+TGG - tig0000788:65574-65593 Msa1335980:intron 40.0%
AAGCTTAGTTACAACAACGC+TGG + tig0000788:65674-65693 None:intergenic 40.0%
AGCGTTGTTGTAACTAAGCT+TGG - tig0000788:65673-65692 Msa1335980:intron 40.0%
GCTACGATATCATGTGCATA+TGG - tig0000788:66178-66197 Msa1335980:intron 40.0%
GTGCATATGGTATTATCAGG+TGG - tig0000788:66191-66210 Msa1335980:intron 40.0%
! CGTCCTCATTCCTATTTTCT+AGG - tig0000788:66240-66259 Msa1335980:intron 40.0%
GCAAAACAGTTCTTCATCTC+TGG + tig0000788:66273-66292 None:intergenic 40.0%
GAGGCCTTAAAGCAATTGTA+TGG + tig0000788:66500-66519 None:intergenic 40.0%
! ACCTAATAATGGGGATAGAC+CGG - tig0000788:66537-66556 Msa1335980:CDS 40.0%
TAAAGTACACCCCACTATAG+AGG + tig0000788:66589-66608 None:intergenic 40.0%
!! CTAGAAATCCTAGCTTTTGG+TGG - tig0000788:66803-66822 Msa1335980:intron 40.0%
AAGTGAAGGATGCACTTCAA+AGG + tig0000788:66873-66892 None:intergenic 40.0%
TCCATCCATACATATCCATG+GGG - tig0000788:66973-66992 Msa1335980:CDS 40.0%
TTGTTTGTTTCAGATCCCCA+TGG + tig0000788:66991-67010 None:intergenic 40.0%
! ACATGGGTGTTGTGAAAAGT+TGG - tig0000788:67059-67078 Msa1335980:CDS 40.0%
! ACACCAGTCCTATTTTCTTG+TGG - tig0000788:67184-67203 Msa1335980:intron 40.0%
! CACCAGTCCTATTTTCTTGT+GGG - tig0000788:67185-67204 Msa1335980:intron 40.0%
ACAACCACCCACAAGAAAAT+AGG + tig0000788:67195-67214 None:intergenic 40.0%
ATTGCAACTGGATGTGAAGA+CGG - tig0000788:67451-67470 Msa1335980:intron 40.0%
! GTTTGATTTAGGTACTCTCC+AGG - tig0000788:67564-67583 Msa1335980:intron 40.0%
!! ACTCTCCAGGTATTGAGAAT+TGG - tig0000788:67577-67596 Msa1335980:intron 40.0%
ATGGACCAATTCTCAATACC+TGG + tig0000788:67585-67604 None:intergenic 40.0%
TGGTCCATGTCAAAATTGCT+TGG - tig0000788:67597-67616 Msa1335980:intron 40.0%
GGTCCATGTCAAAATTGCTT+GGG - tig0000788:67598-67617 Msa1335980:intron 40.0%
GTCCATGTCAAAATTGCTTG+GGG - tig0000788:67599-67618 Msa1335980:intron 40.0%
CCCACTGAAATCAGTAAAGT+TGG + tig0000788:67753-67772 None:intergenic 40.0%
CAAAGCGTGTCTTAACTTCT+TGG - tig0000788:67775-67794 Msa1335980:CDS 40.0%
CTTCTTGGCTACTTAAAAGC+AGG - tig0000788:67790-67809 Msa1335980:intron 40.0%
GCTACTTAAAAGCAGGAAAC+TGG - tig0000788:67797-67816 Msa1335980:intron 40.0%
! CATCATGCTGCTTATCAGTT+CGG + tig0000788:67839-67858 None:intergenic 40.0%
TGATAAGCAGCATGATGCAA+AGG - tig0000788:67842-67861 Msa1335980:intron 40.0%
ATATTTGGTTGGCATGTCAG+TGG + tig0000788:67925-67944 None:intergenic 40.0%
! GCAGTTGATGTTGCTGAAAA+TGG - tig0000788:67984-68003 Msa1335980:intron 40.0%
! CTGGATCACTGTTTTCTGAA+GGG - tig0000788:68033-68052 Msa1335980:intron 40.0%
!! TGGATCACTGTTTTCTGAAG+GGG - tig0000788:68034-68053 Msa1335980:intron 40.0%
CTTGGTCAGAGATAAACATG+AGG - tig0000788:68067-68086 Msa1335980:intron 40.0%
GAGATAAACATGAGGATGAC+TGG - tig0000788:68075-68094 Msa1335980:intron 40.0%
!! TTGTTAAATGTGCTGGTTCC+AGG - tig0000788:68123-68142 Msa1335980:intron 40.0%
GACAAAACAGGTGCCAATAA+AGG + tig0000788:68436-68455 None:intergenic 40.0%
! CCCTTACGTAAGCCTTATAA+AGG - tig0000788:68475-68494 Msa1335980:intron 40.0%
!!! TGGGCTTTTTTACTAGTCCA+AGG - tig0000788:68762-68781 Msa1335980:intron 40.0%
TCATATACTGAGGAACAAGG+TGG + tig0000788:68835-68854 None:intergenic 40.0%
! TGATTAGCGGATCTACTGAT+GGG - tig0000788:69024-69043 Msa1335980:intron 40.0%
!!! CTGATGGGAGTGTTACATTT+TGG - tig0000788:69039-69058 Msa1335980:intron 40.0%
GGGTTATCAAAGGAAAGACA+AGG - tig0000788:69200-69219 Msa1335980:intron 40.0%
ATCAGCCTTAGTTTCCAACA+CGG + tig0000788:69360-69379 None:intergenic 40.0%
!!! CGGCTTTTATCTCTGAAACA+TGG + tig0000788:69460-69479 None:intergenic 40.0%
!! GGAACTATCATTAGTTTGCC+CGG + tig0000788:69480-69499 None:intergenic 40.0%
TCAGTCAATTCATCATCTCG+TGG - tig0000788:69532-69551 Msa1335980:CDS 40.0%
TGACCAAATGTGCTACATCT+GGG + tig0000788:69604-69623 None:intergenic 40.0%
CACTGAACCTGAATACTTGA+AGG - tig0000788:69622-69641 Msa1335980:intron 40.0%
! TTGGTGTCCTTCAAGTATTC+AGG + tig0000788:69632-69651 None:intergenic 40.0%
TCAATAATGAACAGTCGGCA+AGG - tig0000788:69781-69800 Msa1335980:intron 40.0%
TGTCTGACACAATGCTTTGT+TGG - tig0000788:69820-69839 Msa1335980:intron 40.0%
TAACAAGGATCAGTCCTATC+GGG + tig0000788:69916-69935 None:intergenic 40.0%
TTTCAACTGGACTTGATCAG+CGG - tig0000788:70124-70143 Msa1335980:intron 40.0%
!! TGATAATGGTTCCTGCGTAA+GGG + tig0000788:70323-70342 None:intergenic 40.0%
CAGCAACAGCAATCTGATAA+TGG + tig0000788:70337-70356 None:intergenic 40.0%
! CATTATCAGATTGCTGTTGC+TGG - tig0000788:70335-70354 Msa1335980:CDS 40.0%
!! ATGCAAATAGTGGACTTCTC+AGG - tig0000788:70365-70384 Msa1335980:CDS 40.0%
! TCCATGCCTCTGAAAATTGT+TGG - tig0000788:70560-70579 Msa1335980:CDS 40.0%
! CCATGCCTCTGAAAATTGTT+GGG - tig0000788:70561-70580 Msa1335980:CDS 40.0%
AAAAGAAGCAGCAATGGCGA+CGG - tig0000788:58904-58923 Msa1335980:three_prime_UTR 45.0%
AAGACCGACGCTTAATCGAA+TGG - tig0000788:58930-58949 Msa1335980:three_prime_UTR 45.0%
TCTCTTCCTCTTCTACTAGC+CGG - tig0000788:59019-59038 Msa1335980:three_prime_UTR 45.0%
TTCGATGGAATTCGTGTGCA+CGG - tig0000788:59191-59210 Msa1335980:intron 45.0%
GACCAAACTTGGGCAACAAA+TGG + tig0000788:59328-59347 None:intergenic 45.0%
TGTTGCCCAAGTTTGGTCAT+TGG - tig0000788:59330-59349 Msa1335980:CDS 45.0%
GTTGCCCAAGTTTGGTCATT+GGG - tig0000788:59331-59350 Msa1335980:CDS 45.0%
TAAACAGCCCTACTACCAAG+TGG + tig0000788:59735-59754 None:intergenic 45.0%
TCACTCTCCACATTCGAACA+AGG + tig0000788:59758-59777 None:intergenic 45.0%
! ATTCTGGGGATGATCAGAGA+CGG + tig0000788:60132-60151 None:intergenic 45.0%
CACAAGACGACCATGCTATT+CGG + tig0000788:60662-60681 None:intergenic 45.0%
!! TGTCTGTTTCTGATGACCGT+AGG - tig0000788:60694-60713 Msa1335980:intron 45.0%
TATAATGCAGCGCACGTGTA+TGG - tig0000788:60795-60814 Msa1335980:intron 45.0%
ATAATGCAGCGCACGTGTAT+GGG - tig0000788:60796-60815 Msa1335980:intron 45.0%
! TATGGGCTGTTCCTACTGAA+AGG - tig0000788:60813-60832 Msa1335980:intron 45.0%
! ATGGGCTGTTCCTACTGAAA+GGG - tig0000788:60814-60833 Msa1335980:intron 45.0%
! CCCATTGCCCTTGTCTTATT+TGG - tig0000788:60857-60876 Msa1335980:intron 45.0%
!! TGAGTCAGGTCTTTTAAGGG+GGG + tig0000788:62055-62074 None:intergenic 45.0%
! TGTACAGAGGTAGGGGTATA+TGG - tig0000788:62390-62409 Msa1335980:intron 45.0%
TGGGTTTGACTCTGCTATCA+AGG - tig0000788:62454-62473 Msa1335980:intron 45.0%
ACTCTGCTATCAAGGTGCAT+AGG - tig0000788:62462-62481 Msa1335980:intron 45.0%
AAACATCTCTGTTCTTCCGG+GGG + tig0000788:62531-62550 None:intergenic 45.0%
AAGGCCAGTCAACATGGATA+TGG + tig0000788:62701-62720 None:intergenic 45.0%
GCTAAATTATGTGAGGCTGG+AGG - tig0000788:62825-62844 Msa1335980:intron 45.0%
! TGAACAAGGATGTGGTGATG+AGG - tig0000788:62926-62945 Msa1335980:intron 45.0%
! AAGGATGTGGTGATGAGGAT+TGG - tig0000788:62931-62950 Msa1335980:intron 45.0%
GATGAGGATTGGATTGCCAT+CGG - tig0000788:62942-62961 Msa1335980:intron 45.0%
ATTGCCATCGGAGATGGTAA+AGG - tig0000788:62954-62973 Msa1335980:intron 45.0%
TGAAATGGAGAGGCAGCTAT+TGG - tig0000788:63049-63068 Msa1335980:intron 45.0%
GAAATGGAGAGGCAGCTATT+GGG - tig0000788:63050-63069 Msa1335980:intron 45.0%
GGCAGCTATTGGGTACTTAT+TGG - tig0000788:63060-63079 Msa1335980:intron 45.0%
!! GGTGCAAATCTTTGGGATCT+AGG - tig0000788:63081-63100 Msa1335980:intron 45.0%
CACACCATTATGAGACTCCT+GGG - tig0000788:63297-63316 Msa1335980:CDS 45.0%
ACACCATTATGAGACTCCTG+GGG - tig0000788:63298-63317 Msa1335980:CDS 45.0%
TTTCCCCAGGAGTCTCATAA+TGG + tig0000788:63304-63323 None:intergenic 45.0%
! GTATCCTGTGGTGGTGAATT+GGG + tig0000788:63626-63645 None:intergenic 45.0%
! AGTATCCTGTGGTGGTGAAT+TGG + tig0000788:63627-63646 None:intergenic 45.0%
TCAGCCCAAAAGAGCTCAAA+GGG + tig0000788:64122-64141 None:intergenic 45.0%
GTGTGTTTGGATGGCGTAAT+TGG - tig0000788:64619-64638 Msa1335980:intron 45.0%
AGAGTTTCAATCCTCCTCTG+GGG + tig0000788:65109-65128 None:intergenic 45.0%
CAGAGTTTCAATCCTCCTCT+GGG + tig0000788:65110-65129 None:intergenic 45.0%
GTGTTTGGATGCATGTTTGG+AGG - tig0000788:65229-65248 Msa1335980:intron 45.0%
TCATCAAGAAGCTATGCAGC+AGG - tig0000788:66033-66052 Msa1335980:intron 45.0%
CAGGTGGTGAAAATTCCATG+TGG - tig0000788:66207-66226 Msa1335980:intron 45.0%
GTGGTGAAAATTCCATGTGG+TGG - tig0000788:66210-66229 Msa1335980:intron 45.0%
TGAAAATTCCATGTGGTGGC+TGG - tig0000788:66214-66233 Msa1335980:intron 45.0%
TCCGGTCTATCCCCATTATT+AGG + tig0000788:66541-66560 None:intergenic 45.0%
! AGGATTTGGCTCCTCTATAG+TGG - tig0000788:66575-66594 Msa1335980:CDS 45.0%
! GGATTTGGCTCCTCTATAGT+GGG - tig0000788:66576-66595 Msa1335980:CDS 45.0%
! GATTTGGCTCCTCTATAGTG+GGG - tig0000788:66577-66596 Msa1335980:CDS 45.0%
!! GTCTAAATCTGTTTCTGCCG+TGG - tig0000788:66832-66851 Msa1335980:intron 45.0%
TCCCCATGGATATGTATGGA+TGG + tig0000788:66977-66996 None:intergenic 45.0%
CAGATCCCCATGGATATGTA+TGG + tig0000788:66981-67000 None:intergenic 45.0%
CACCCACAAGAAAATAGGAC+TGG + tig0000788:67190-67209 None:intergenic 45.0%
! CAGTCCTATTTTCTTGTGGG+TGG - tig0000788:67188-67207 Msa1335980:intron 45.0%
AGGAATGTATCTCTCTCCCA+TGG + tig0000788:67360-67379 None:intergenic 45.0%
TTGCAACTGGATGTGAAGAC+GGG - tig0000788:67452-67471 Msa1335980:intron 45.0%
CTACACGCAGCAGAGAATAA+TGG + tig0000788:67501-67520 None:intergenic 45.0%
!! CTCCCCAAGCAATTTTGACA+TGG + tig0000788:67604-67623 None:intergenic 45.0%
! AAATTGCTTGGGGAGCATGT+TGG - tig0000788:67609-67628 Msa1335980:intron 45.0%
ATGTTGGAGGATCAGCTGTA+AGG - tig0000788:67625-67644 Msa1335980:intron 45.0%
! GGTACATTGGTTGTAGCTGA+TGG + tig0000788:67684-67703 None:intergenic 45.0%
CAACCAATGTACCTGATGAG+AGG - tig0000788:67691-67710 Msa1335980:intron 45.0%
TTAAGTTCGCTCCTCTCATC+AGG + tig0000788:67705-67724 None:intergenic 45.0%
CGTCATTGAAGAAGACATGC+TGG + tig0000788:67889-67908 None:intergenic 45.0%
CTTCTTCAATGACGTTCCAG+TGG - tig0000788:67895-67914 Msa1335980:intron 45.0%
! GCTGGATCACTGTTTTCTGA+AGG - tig0000788:68032-68051 Msa1335980:intron 45.0%
!! GGATCACTGTTTTCTGAAGG+GGG - tig0000788:68035-68054 Msa1335980:intron 45.0%
!! GATCACTGTTTTCTGAAGGG+GGG - tig0000788:68036-68055 Msa1335980:intron 45.0%
GATGCCTAACATTTGCGTCT+TGG - tig0000788:68154-68173 Msa1335980:intron 45.0%
GGAACCAAGACGCAAATGTT+AGG + tig0000788:68161-68180 None:intergenic 45.0%
! GTGATTAGCGGATCTACTGA+TGG - tig0000788:69023-69042 Msa1335980:intron 45.0%
TGGAGGAGATCTTTAAGCAG+TGG - tig0000788:69179-69198 Msa1335980:intron 45.0%
GGAGGAGATCTTTAAGCAGT+GGG - tig0000788:69180-69199 Msa1335980:intron 45.0%
GGAAAGACAAGGCAACAATC+AGG - tig0000788:69211-69230 Msa1335980:intron 45.0%
!!! GATGCTTTCGGCCTTGTTTT+TGG + tig0000788:69249-69268 None:intergenic 45.0%
TCAGCCTTAGTTTCCAACAC+GGG + tig0000788:69359-69378 None:intergenic 45.0%
TAAGGCTGATGATTCCTCAG+CGG - tig0000788:69370-69389 Msa1335980:intron 45.0%
ACTAACTATGCTGTACACGC+AGG + tig0000788:69501-69520 None:intergenic 45.0%
TGCGTGTACAGCATAGTTAG+TGG - tig0000788:69500-69519 Msa1335980:CDS 45.0%
GCGTGTACAGCATAGTTAGT+GGG - tig0000788:69501-69520 Msa1335980:CDS 45.0%
CGTGTACAGCATAGTTAGTG+GGG - tig0000788:69502-69521 Msa1335980:CDS 45.0%
GTGTACAGCATAGTTAGTGG+GGG - tig0000788:69503-69522 Msa1335980:CDS 45.0%
AACCCCAGATGTAGCACATT+TGG - tig0000788:69598-69617 Msa1335980:intron 45.0%
GACCAAATGTGCTACATCTG+GGG + tig0000788:69603-69622 None:intergenic 45.0%
GTGACCAAATGTGCTACATC+TGG + tig0000788:69605-69624 None:intergenic 45.0%
ACCTTTCACAGAAGAGCTGT+GGG + tig0000788:69717-69736 None:intergenic 45.0%
TACCTTTCACAGAAGAGCTG+TGG + tig0000788:69718-69737 None:intergenic 45.0%
TCAGTCCTATCGGGAATGAT+AGG + tig0000788:69907-69926 None:intergenic 45.0%
! GGATCTTGGGTGTTTTCAAC+TGG - tig0000788:70111-70130 Msa1335980:intron 45.0%
TTCAACTGGACTTGATCAGC+GGG - tig0000788:70125-70144 Msa1335980:intron 45.0%
TCTGGTGAAGATGCCAACAT+CGG + tig0000788:70152-70171 None:intergenic 45.0%
ATAGGAGTGAATGACTGGGT+TGG - tig0000788:70257-70276 Msa1335980:CDS 45.0%
TAGGAGTGAATGACTGGGTT+GGG - tig0000788:70258-70277 Msa1335980:CDS 45.0%
!! CTGATAATGGTTCCTGCGTA+AGG + tig0000788:70324-70343 None:intergenic 45.0%
! AGATTGCTGTTGCTGGAAGA+GGG - tig0000788:70342-70361 Msa1335980:CDS 45.0%
TGGAAGAGGGATGCAAATAG+TGG - tig0000788:70355-70374 Msa1335980:CDS 45.0%
! CCCAACAATTTTCAGAGGCA+TGG + tig0000788:70564-70583 None:intergenic 45.0%
GACGCCATTCGATTAAGCGT+CGG + tig0000788:58937-58956 None:intergenic 50.0%
CTGAGATGTCGCCAAGGTAA+GGG + tig0000788:58970-58989 None:intergenic 50.0%
! GAGATACCGGCTAGTAGAAG+AGG + tig0000788:59028-59047 None:intergenic 50.0%
TCGATGGAATTCGTGTGCAC+GGG - tig0000788:59192-59211 Msa1335980:intron 50.0%
! CGACTTGCCACTTGGTAGTA+GGG - tig0000788:59725-59744 Msa1335980:intron 50.0%
TCCAGAAGACCATGACTGTC+AGG - tig0000788:60554-60573 Msa1335980:intron 50.0%
CCAGAAGACCATGACTGTCA+GGG - tig0000788:60555-60574 Msa1335980:intron 50.0%
CGAATAGCATGGTCGTCTTG+TGG - tig0000788:60660-60679 Msa1335980:intron 50.0%
GCCTCATTCTTGTCTGTCCA+GGG - tig0000788:62484-62503 Msa1335980:intron 50.0%
CCTCATTCTTGTCTGTCCAG+GGG - tig0000788:62485-62504 Msa1335980:intron 50.0%
TTCTTGTCTGTCCAGGGGTT+TGG - tig0000788:62490-62509 Msa1335980:intron 50.0%
GGCAAAAAGGCCAGTCAACA+TGG + tig0000788:62707-62726 None:intergenic 50.0%
TCGTTGGAATCAGCTTGTCC+AGG - tig0000788:62851-62870 Msa1335980:intron 50.0%
CGGGGCACAAATTATCTGCA+TGG - tig0000788:62881-62900 Msa1335980:intron 50.0%
GATTGGATTGCCATCGGAGA+TGG - tig0000788:62948-62967 Msa1335980:intron 50.0%
CTTGGCAAGCTGAAATGGAG+AGG - tig0000788:63039-63058 Msa1335980:intron 50.0%
CAGGACAGTTATCAGGCAGT+GGG + tig0000788:63228-63247 None:intergenic 50.0%
ACAGGACAGTTATCAGGCAG+TGG + tig0000788:63229-63248 None:intergenic 50.0%
GTGAGGACAGGACAGTTATC+AGG + tig0000788:63235-63254 None:intergenic 50.0%
CCAGGAGTCTCATAATGGTG+TGG + tig0000788:63299-63318 None:intergenic 50.0%
CCACACCATTATGAGACTCC+TGG - tig0000788:63296-63315 Msa1335980:CDS 50.0%
GGATGTCGTGCTGTATAGCA+CGG + tig0000788:63384-63403 None:intergenic 50.0%
TACTGTCGTGCTTGTCGTGT+GGG + tig0000788:63410-63429 None:intergenic 50.0%
TTACTGTCGTGCTTGTCGTG+TGG + tig0000788:63411-63430 None:intergenic 50.0%
CAGCCCAAAAGAGCTCAAAG+GGG + tig0000788:64121-64140 None:intergenic 50.0%
GTCAGCCCAAAAGAGCTCAA+AGG + tig0000788:64123-64142 None:intergenic 50.0%
GTCTTTACAACTGACCCCAG+AGG - tig0000788:65092-65111 Msa1335980:intron 50.0%
TTTACAACTGACCCCAGAGG+AGG - tig0000788:65095-65114 Msa1335980:intron 50.0%
CCAGAGTTTCAATCCTCCTC+TGG + tig0000788:65111-65130 None:intergenic 50.0%
CCAGAGGAGGATTGAAACTC+TGG - tig0000788:65108-65127 Msa1335980:intron 50.0%
GAGGAGGATTGAAACTCTGG+AGG - tig0000788:65111-65130 Msa1335980:intron 50.0%
GGATGCATGTTTGGAGGAAG+AGG - tig0000788:65235-65254 Msa1335980:intron 50.0%
TATTTGCAGGTCCTAGCGTG+TGG - tig0000788:65520-65539 Msa1335980:intron 50.0%
CATGTTCAGACTGGAGCAGA+TGG - tig0000788:65889-65908 Msa1335980:intron 50.0%
AAATTCCATGTGGTGGCTGG+CGG - tig0000788:66217-66236 Msa1335980:intron 50.0%
ACGGGACTGTGAGATTGACT+TGG - tig0000788:67470-67489 Msa1335980:intron 50.0%
GCTCCTCTCATCAGGTACAT+TGG + tig0000788:67697-67716 None:intergenic 50.0%
CGAACTTAATGCTGCTGCTG+AGG - tig0000788:67716-67735 Msa1335980:intron 50.0%
TGAAGGGGGGACAATGAACT+TGG - tig0000788:68049-68068 Msa1335980:intron 50.0%
!! ATGTGCTGGTTCCAGGTTAG+AGG - tig0000788:68130-68149 Msa1335980:intron 50.0%
GTTAGGCATCTCCTCTAACC+TGG + tig0000788:68144-68163 None:intergenic 50.0%
AAGCTTCCACACTGTCAGTC+AGG + tig0000788:69067-69086 None:intergenic 50.0%
TGTCAAAAACGACCACGCAC+AGG - tig0000788:69131-69150 Msa1335980:intron 50.0%
GTCAAAAACGACCACGCACA+GGG - tig0000788:69132-69151 Msa1335980:intron 50.0%
TTCCCCCGTGTTGGAAACTA+AGG - tig0000788:69352-69371 Msa1335980:intron 50.0%
AGCCTTAGTTTCCAACACGG+GGG + tig0000788:69357-69376 None:intergenic 50.0%
CAGCCTTAGTTTCCAACACG+GGG + tig0000788:69358-69377 None:intergenic 50.0%
GGAGACAGTTGACACCAGAT+TGG + tig0000788:69439-69458 None:intergenic 50.0%
!! TATGAAGGTGTCTGGACGGA+TGG - tig0000788:70090-70109 Msa1335980:intron 50.0%
TGTCTGGACGGATGGATCTT+GGG - tig0000788:70098-70117 Msa1335980:intron 50.0%
! AGCCTGAAGCGTTATCTGCT+AGG - tig0000788:70214-70233 Msa1335980:CDS 50.0%
! GCCTGAAGCGTTATCTGCTA+GGG - tig0000788:70215-70234 Msa1335980:CDS 50.0%
TATCTGCTAGGGCATGTAGC+AGG - tig0000788:70226-70245 Msa1335980:CDS 50.0%
! CAGATTGCTGTTGCTGGAAG+AGG - tig0000788:70341-70360 Msa1335980:CDS 50.0%
ATCGAATGGCGTCTGCATCG+TGG - tig0000788:58944-58963 Msa1335980:three_prime_UTR 55.0%
GCTGAGATGTCGCCAAGGTA+AGG + tig0000788:58971-58990 None:intergenic 55.0%
AGAGAGCTGAGATGTCGCCA+AGG + tig0000788:58976-58995 None:intergenic 55.0%
GTTGCTTGCGACTTGCCACT+TGG - tig0000788:59717-59736 Msa1335980:intron 55.0%
! GCGACTTGCCACTTGGTAGT+AGG - tig0000788:59724-59743 Msa1335980:intron 55.0%
GGTTCGGGCAGATTGTCGTT+TGG - tig0000788:60496-60515 Msa1335980:CDS 55.0%
CCCTGACAGTCATGGTCTTC+TGG + tig0000788:60558-60577 None:intergenic 55.0%
GGCCTCATTCTTGTCTGTCC+AGG - tig0000788:62483-62502 Msa1335980:intron 55.0%
CCCCTGGACAGACAAGAATG+AGG + tig0000788:62488-62507 None:intergenic 55.0%
GCAGCAGCACAATTATCCCC+CGG - tig0000788:62512-62531 Msa1335980:intron 55.0%
CAGCTTGTCCAGGTCAGCAA+CGG - tig0000788:62861-62880 Msa1335980:intron 55.0%
AGCTTGTCCAGGTCAGCAAC+GGG - tig0000788:62862-62881 Msa1335980:intron 55.0%
TCGTGCTTGTCGTGTGGGAA+GGG + tig0000788:63405-63424 None:intergenic 55.0%
GATGCCCAATTCACCACCAC+AGG - tig0000788:63619-63638 Msa1335980:CDS 55.0%
CACGTAGATCTCCACACGCT+AGG + tig0000788:65534-65553 None:intergenic 55.0%
CTAGCGTGTGGAGATCTACG+TGG - tig0000788:65532-65551 Msa1335980:intron 55.0%
ACGTGCGTCCACCAAAAGCT+AGG + tig0000788:66814-66833 None:intergenic 55.0%
! TTGCTTGGGGAGCATGTTGG+AGG - tig0000788:67612-67631 Msa1335980:intron 55.0%
GCATGTCAGTGGAAAGCCAC+TGG + tig0000788:67914-67933 None:intergenic 55.0%
GGTGGAGACAGGCACTAAAG+AGG + tig0000788:68817-68836 None:intergenic 55.0%
CTGAGGAACAAGGTGGAGAC+AGG + tig0000788:68828-68847 None:intergenic 55.0%
TTGGGACCTGACTGACAGTG+TGG - tig0000788:69058-69077 Msa1335980:intron 55.0%
GAGGAAGTCAGGGTGGTAGA+CGG - tig0000788:69156-69175 Msa1335980:intron 55.0%
ACATACAGCTTCCCCCGTGT+TGG - tig0000788:69343-69362 Msa1335980:intron 55.0%
GCCCACAGCTCTTCTGTGAA+AGG - tig0000788:69713-69732 Msa1335980:CDS 55.0%
AACAGTCGGCAAGGCATGAC+AGG - tig0000788:69790-69809 Msa1335980:intron 55.0%
GTGTCTGGACGGATGGATCT+TGG - tig0000788:70097-70116 Msa1335980:intron 55.0%
TTGATCAGCGGGTCCGATGT+TGG - tig0000788:70136-70155 Msa1335980:intron 55.0%
GCAGATAACGCTTCAGGCTC+CGG + tig0000788:70213-70232 None:intergenic 55.0%
GCCCTAGCAGATAACGCTTC+AGG + tig0000788:70219-70238 None:intergenic 55.0%
CCTCGCATCATTCATCGTGC+TGG + tig0000788:70394-70413 None:intergenic 55.0%
CCAGCACGATGAATGATGCG+AGG - tig0000788:70391-70410 Msa1335980:CDS 55.0%
CTGCATCGTGGCCCTTACCT+TGG - tig0000788:58956-58975 Msa1335980:three_prime_UTR 60.0%
! TTGTGCTGCTGCCAAACCCC+TGG + tig0000788:62504-62523 None:intergenic 60.0%
GCTTGTCCAGGTCAGCAACG+GGG - tig0000788:62863-62882 Msa1335980:intron 60.0%
TTTGTGCCCCGTTGCTGACC+TGG + tig0000788:62872-62891 None:intergenic 60.0%
GTCGTGCTTGTCGTGTGGGA+AGG + tig0000788:63406-63425 None:intergenic 60.0%
AAACGACCACGCACAGGGAG+AGG - tig0000788:69137-69156 Msa1335980:intron 60.0%
TGACTTCCTCTCCCTGTGCG+TGG + tig0000788:69146-69165 None:intergenic 60.0%
ACGCACAGGGAGAGGAAGTC+AGG - tig0000788:69145-69164 Msa1335980:intron 60.0%
CGCACAGGGAGAGGAAGTCA+GGG - tig0000788:69146-69165 Msa1335980:intron 60.0%
ACAGGGAGAGGAAGTCAGGG+TGG - tig0000788:69149-69168 Msa1335980:intron 60.0%
GAAGTCAGGGTGGTAGACGG+TGG - tig0000788:69159-69178 Msa1335980:intron 60.0%
CACGGGGGAAGCTGTATGTC+TGG + tig0000788:69342-69361 None:intergenic 60.0%
ACAGAAGAGCTGTGGGCCGA+AGG + tig0000788:69710-69729 None:intergenic 60.0%
! CACTTGCTGGTCCCTTACGC+AGG - tig0000788:70309-70328 Msa1335980:CDS 60.0%
!! GTGAGGCTGGAGGTGCTCGT+TGG - tig0000788:62835-62854 Msa1335980:intron 65.0%
GTCAGGGTGGTAGACGGTGG+AGG - tig0000788:69162-69181 Msa1335980:intron 65.0%
GGACGCCGCCAGCCACCACA+TGG + tig0000788:66225-66244 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0000788 gene 58887 70651 58887 ID=Msa1335980;Name=Msa1335980
tig0000788 mRNA 58887 70651 58887 ID=Msa1335980-mRNA-1;Parent=Msa1335980;Name=Msa1335980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=30|1|1|1|1|1|20|245|1374
tig0000788 exon 58887 59207 58887 ID=Msa1335980-mRNA-1:exon:511;Parent=Msa1335980-mRNA-1
tig0000788 exon 59291 59441 59291 ID=Msa1335980-mRNA-1:exon:510;Parent=Msa1335980-mRNA-1
tig0000788 exon 59804 60544 59804 ID=Msa1335980-mRNA-1:exon:509;Parent=Msa1335980-mRNA-1
tig0000788 exon 61042 61127 61042 ID=Msa1335980-mRNA-1:exon:508;Parent=Msa1335980-mRNA-1
tig0000788 exon 61229 61309 61229 ID=Msa1335980-mRNA-1:exon:507;Parent=Msa1335980-mRNA-1
tig0000788 exon 61394 61963 61394 ID=Msa1335980-mRNA-1:exon:506;Parent=Msa1335980-mRNA-1
tig0000788 exon 62047 62261 62047 ID=Msa1335980-mRNA-1:exon:505;Parent=Msa1335980-mRNA-1
tig0000788 exon 63236 63328 63236 ID=Msa1335980-mRNA-1:exon:504;Parent=Msa1335980-mRNA-1
tig0000788 exon 63434 63640 63434 ID=Msa1335980-mRNA-1:exon:503;Parent=Msa1335980-mRNA-1
tig0000788 exon 63818 64009 63818 ID=Msa1335980-mRNA-1:exon:502;Parent=Msa1335980-mRNA-1
tig0000788 exon 64282 64450 64282 ID=Msa1335980-mRNA-1:exon:501;Parent=Msa1335980-mRNA-1
tig0000788 exon 66436 66795 66436 ID=Msa1335980-mRNA-1:exon:500;Parent=Msa1335980-mRNA-1
tig0000788 exon 66941 67141 66941 ID=Msa1335980-mRNA-1:exon:499;Parent=Msa1335980-mRNA-1
tig0000788 exon 67717 67799 67717 ID=Msa1335980-mRNA-1:exon:498;Parent=Msa1335980-mRNA-1
tig0000788 exon 68619 68733 68619 ID=Msa1335980-mRNA-1:exon:497;Parent=Msa1335980-mRNA-1
tig0000788 exon 68823 69031 68823 ID=Msa1335980-mRNA-1:exon:496;Parent=Msa1335980-mRNA-1
tig0000788 exon 69494 69576 69494 ID=Msa1335980-mRNA-1:exon:495;Parent=Msa1335980-mRNA-1
tig0000788 exon 69675 69792 69675 ID=Msa1335980-mRNA-1:exon:494;Parent=Msa1335980-mRNA-1
tig0000788 exon 70162 70412 70162 ID=Msa1335980-mRNA-1:exon:493;Parent=Msa1335980-mRNA-1
tig0000788 exon 70498 70651 70498 ID=Msa1335980-mRNA-1:exon:492;Parent=Msa1335980-mRNA-1
tig0000788 five_prime_UTR 70622 70651 70622 ID=Msa1335980-mRNA-1:five_prime_utr;Parent=Msa1335980-mRNA-1
tig0000788 CDS 70498 70621 70498 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 70162 70412 70162 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 69675 69792 69675 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 69494 69576 69494 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 68823 69031 68823 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 68619 68733 68619 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 67717 67799 67717 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 66941 67141 66941 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 66436 66795 66436 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 64282 64450 64282 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 63818 64009 63818 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 63434 63640 63434 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 63236 63328 63236 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 62047 62261 62047 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 61394 61963 61394 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 61229 61309 61229 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 61042 61127 61042 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 59804 60544 59804 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 59291 59441 59291 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 CDS 59132 59207 59132 ID=Msa1335980-mRNA-1:cds;Parent=Msa1335980-mRNA-1
tig0000788 three_prime_UTR 58887 59131 58887 ID=Msa1335980-mRNA-1:three_prime_utr;Parent=Msa1335980-mRNA-1
Gene Sequence

>Msa1335980

ATGGCGACGGAAGAAGACCGACGCTTAATCGAATGGCGTCTGCATCGTGGCCCTTACCTTGGCGACATCTCAGCTCTCTGCTTTCTTCATCTTCCCAATCACTCTCTTCCTCTTCTACTAGCCGGTTTGGGTTCGGAGATTTTGTTGTACGACTTAGAATTTGGGAAGATAATGAAATCGTTTTCGGTTTTCGATGGAATTCGTGTGCACGGGATTGCTTCTAGTTTTGAATCTGTGATTGTAGTGTTTGGAGAGAAAAGAGTGAAAATGTTTCGGTTTTCGTTTGAAAATGACGAGTTTGGGAGTCCACAGTTAACATTGATCCATTTGTTGCCCAAGTTTGGTCATTGGGTTTTGGATGTTTGCTTCCTCAAGGGCTGTTTACCTTGTTCGAATGTGGAGAGTGATTTTCTTGCTATAGGATGTAGTGACAATTCAGTTTGCATATGGGACATTTCCAATTCTAATGCGGTTCTTAAGGTTCAATCACCAGTACGATGCCTTTTGTACTCAATGCGGTTATGGGGTCACAATCTTGAAGTTCTCCATATTGCATCCGGTACAATATTTAACGAGATTGTCGTTTGGAAAGTATCCCCTCAACATGATAAATCTTCAACAACTCCAGAAGACCATGACTGTCAGGGATCTAATTGCAGCTCACTAAAAGATAATATATATGAGGCTGTTCACGTATGTAAACTTGTGGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGATCTAAACTTCTGTCTGTTTCTGATGACCGTAGCGCACGTGTATGGGCTGTTCCTACTGAAAGGGAAGATTCATTGTACAATGATCCCATTGCCCTTGTCTTATTTGGACATAATGCTCGAGTTTGGGATTGTTGTATTTCTGATCATTTTATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAATTGATGGCGAACAGCTGCAAGTCATTAGAGAGCACATAGGTAGGGGTATATGGAGATGTTTGTATGACCCAAATTTGTCACTTCTTATAACTGCTGGGTTTGACTCTGCTATCAAGGTGCATAGGCCTCATTCTTGTCTGTCCAGGGGTTTGGCAGCAGCACAATTATCCCCCGGAAGAACAGAGATGTTTTCCATTTGCATCCCTAATATGTTGGAGCATATTGGATTGACAGACAGCAAGAGTGAATACGTTCGTTGTTTGCGTTTTTCATCTCAGGATTCTCTTTTTGTTGCTACCAATCACGGTTATCTCTACCATGCTAAATTATGTGAGGCTGGAGGTGCTCGTTGGAATCAGCTTGTCCAGGTCAGCAACGGGGCACAAATTATCTGCATGGATTTATTGTCCAAGGACTCATTTGAACAAGGATGTGGTGATGAGGATTGGATTGCCATCGGAGATGGTAAAGGAAATATGACAGTTGTTGTAGTTACTAACAATGATTGTGCTCCTACAGTTAGATTGAGCTTTACTTGGCAAGCTGAAATGGAGAGGCAGCTATTGGGTACTTATTGGTGCAAATCTTTGGGATCTAGGTATGTCTTTACAACTGACCCCAGAGGAGGATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATCTAATAGTCAGAACTCCATGAGGGATATTGTGTCACATGCAGCAGAATTCATATCAAGTTATGGAATGCGGATAATGTGTTTGGATGCATGTTTGGAGGAAGAGGTCCTAGCGTGTGGAGATCTACGTGGAAATATGGTTTTGTTTCCTTTGCTAAAGAATCTGGTGCTTGGTACATCTGTTGCACAAGAGATGAAAATACCGCCAGTAAATCATTTTAAAGGTGTTCACGGGATTTCAAGTGTCTCCAGCGTTGTTGTAACTAAGCTTGGTTATAATCAAATTGAGATACGCTCAACTGGAGCAGATGGTTGTATATGCTATCTGGAATATGATGGGGAAATGCAGAATTTGCAATTTACGGGAATGAAACAAGTGAAAGAGTTGTCTTCGATTGAGCATGTTTCTGTTGATAACAACTCGGAAGATACATCATCAAGAAGCTATGCAGCAGGTTTTGCATCTGTAGATTTCATAGTATGGAATTTAGTCAATGAGAATAAGGTGGTGAAAATTCCATGTGGTGGCTGGCGGCGTCCTCATTCCTATTTTCTAGGTGATGTACCAGAGATGAAGAACTGTTTTGCTTTTGTTAAGGATGAAATAATATATATACATAGACACTGGATTAATAATAACGTTGGGAAGATATACCCTCTAAGTTTGCATATGCAATTCCATGGGAGAGAGATACATTCCTTGTGCTTTATACACGAAGATATGCTTCTAGGAGATTATTGTAAACGTGCATCATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAAGACGGGACTGTGAGATTGACTTGGTACTCTCCAGGTATTGAGAATTGGTCCATGTCAAAATTGCTTGGGGAGCATGTTGGAGGATCAGCTGTAAGGTCAATTTGTTGTGTTTCGAAACTACACATCATTCCATCAGCTACAACCAATGTACCTGATGAGAGGAGCGAACTTAATGCTGCTGCTGAGGACAAAGATAATCCAACTTTACTGATTTCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGCTACTTAAAAGCAGGAAACTGGATAACAAAACTAACTTCCGAACTGATAAGCAGCATGATGCAAAGGAACTTGATGATCAATTTTTGTCCAGCATGTCTTCTTCAATGACGTTCCAGTGGCTTTCCACTGACATGCCAACCAAATATTCAAGTACACACAGATATACAGAAAATAATGTGGGGAAAGCAGTTGATGTTGCTGAAAATGGTTCTAAAATAAAAATTGATGCTGAGGCTGGATCACTGTTTTCTGAAGGGGGGACAATGAACTTGGTCAGAGATAAACATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGATATCTGTCTGTTTTGTTGTCGTTGCTTGTTCAGATGCTACAGTTATGTTACGGGCTTTAATTTTACCCTTTCGCTTATGGTTTGACGTTGCATTACTTGTTCCTTTATTGGCACCTGTTTTGTCATTGCAGCATATCATCTTTCCCTTACGTAAGCCTTATAAAGATAACATCAAAGTTGGAAATGTTTACATTGTGATTAGCGGATCTACTGATGGGAGTGTTACATTTTGGGACCTGACTGACAGTGTGGAAGCTTTTATGCAGAGCGTTTCAGTTTGTGATGTAGAGAAGCTTTTTGATTGTCAAAAACGACCACGCACAGGGAGAGGAAGTCAGGGTGGTAGACGGTGGAGGAGATCTTTAAGCAGTGGGTTATCAAAGGAAAGACAAGGCAACAATCAGGTGACTTCAAAAGCCAAAAACAAGGCCGAAAGCATCAATTCTACTACACATGGGACCTCTTCAGTGCCAAATAAATCTGAAGACAACAATATGGTTTGTTCTCAAACCAGACATACAGCTTCCCCCGTGTTGGAAACTAAGGCTGATGATTCCTCAGCGGAAATATGTGAAATACAACCTCTACACCTTTTGAAAAATGTTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAAGCCGGGCAAACTAATGATAGTTCCTGCGTGTACAGCATAGTTAGTGGGGGAGATGATCAGTCAATTCATCATCTCGTGGTTGAGTTATCAACTAAAACAATAAATATCGATTATGGGGTTTTAACCCCAGATGTAGCACATTTGGTCACTGAACCTGAATACTTGAAGGACACCAATTTTCAAAATCATAGCAGAAACTACGAGATCAGATTCTTAAATTCTGAAAAATTTCCTTCGGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACGGATGGATCTTGGGTGTTTTCAACTGGACTTGATCAGCGGGTCCGATGTTGGCATCTTCACCAGAGTAAACTAATAGAACGTGCACACTTAATAGTTAGTGTGCCGGAGCCTGAAGCGTTATCTGCTAGGGCATGTAGCAGGAACCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAGTGGACTTCTCAGGATGCCAGCACGATGAATGA
Protein sequence

>Msa1335980

MATEEDRRLIEWRLHRGPYLGDISALCFLHLPNHSLPLLLAGLGSEILLYDLEFGKIMKSFSVFDGIRVHGIASSFESVIVVFGEKRVKMFRFSFENDEFGSPQLTLIHLLPKFGHWVLDVCFLKGCLPCSNVESDFLAIGCSDNSVCIWDISNSNAVLKVQSPVRCLLYSMRLWGHNLEVLHIASGTIFNEIVVWKVSPQHDKSSTTPEDHDCQGSNCSSLKDNIYEAVHVCKLVGHEGSIFRIAWSSCGSKLLSVSDDRSARVWAVPTEREDSLYNDPIALVLFGHNARVWDCCISDHFIVTVSEDCTCRIWGIDGEQLQVIREHIGRGIWRCLYDPNLSLLITAGFDSAIKVHRPHSCLSRGLAAAQLSPGRTEMFSICIPNMLEHIGLTDSKSEYVRCLRFSSQDSLFVATNHGYLYHAKLCEAGGARWNQLVQVSNGAQIICMDLLSKDSFEQGCGDEDWIAIGDGKGNMTVVVVTNNDCAPTVRLSFTWQAEMERQLLGTYWCKSLGSRYVFTTDPRGGLKLWRLPDPSQSNSQNSMRDIVSHAAEFISSYGMRIMCLDACLEEEVLACGDLRGNMVLFPLLKNLVLGTSVAQEMKIPPVNHFKGVHGISSVSSVVVTKLGYNQIEIRSTGADGCICYLEYDGEMQNLQFTGMKQVKELSSIEHVSVDNNSEDTSSRSYAAGFASVDFIVWNLVNENKVVKIPCGGWRRPHSYFLGDVPEMKNCFAFVKDEIIYIHRHWINNNVGKIYPLSLHMQFHGREIHSLCFIHEDMLLGDYCKRASFSKSSWIATGCEDGTVRLTWYSPGIENWSMSKLLGEHVGGSAVRSICCVSKLHIIPSATTNVPDERSELNAAAEDKDNPTLLISVGAKRVLTSWLLKSRKLDNKTNFRTDKQHDAKELDDQFLSSMSSSMTFQWLSTDMPTKYSSTHRYTENNVGKAVDVAENGSKIKIDAEAGSLFSEGGTMNLVRDKHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATVMLRALILPFRLWFDVALLVPLLAPVLSLQHIIFPLRKPYKDNIKVGNVYIVISGSTDGSVTFWDLTDSVEAFMQSVSVCDVEKLFDCQKRPRTGRGSQGGRRWRRSLSSGLSKERQGNNQVTSKAKNKAESINSTTHGTSSVPNKSEDNNMVCSQTRHTASPVLETKADDSSAEICEIQPLHLLKNVHQSGVNCLHVSEIKAGQTNDSSCVYSIVSGGDDQSIHHLVVELSTKTINIDYGVLTPDVAHLVTEPEYLKDTNFQNHSRNYEIRFLNSEKFPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLHQSKLIERAHLIVSVPEPEALSARACSRNHYQIAVAGRGMQIVDFSGCQHDE*