AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1337550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337550 MtrunA17_Chr4g0072761 96.476 454 16 0 1 454 1 454 0.0 903
Msa1337550 MtrunA17_Chr4g0072771 76.586 457 104 1 1 454 11 467 0.0 719
Msa1337550 MtrunA17_Chr8g0377921 29.498 478 279 16 15 452 4 463 2.04e-53 186
Msa1337550 MtrunA17_Chr6g0454401 29.939 491 294 14 1 452 1 480 5.08e-53 185
Msa1337550 MtrunA17_Chr5g0414331 29.512 471 289 13 7 454 5 455 7.26e-53 184
Msa1337550 MtrunA17_Chr3g0118671 27.848 474 296 12 14 449 5 470 2.20e-52 183
Msa1337550 MtrunA17_Chr7g0232411 29.701 468 285 12 14 448 5 461 1.42e-51 181
Msa1337550 MtrunA17_Chr8g0366391 30.550 491 278 14 11 454 5 479 1.49e-51 181
Msa1337550 MtrunA17_Chr6g0464881 28.942 463 287 14 11 449 7 451 1.74e-51 180
Msa1337550 MtrunA17_Chr7g0232391 30.556 468 281 13 14 448 5 461 2.13e-51 180
Msa1337550 MtrunA17_Chr3g0112761 28.821 458 297 11 7 449 3 446 5.55e-51 179
Msa1337550 MtrunA17_Chr3g0092641 31.106 479 282 17 12 452 9 477 1.05e-50 179
Msa1337550 MtrunA17_Chr5g0414321 29.515 454 285 9 7 441 3 440 1.63e-50 177
Msa1337550 MtrunA17_Chr3g0118691 26.789 489 314 12 1 452 1 482 1.69e-50 178
Msa1337550 MtrunA17_Chr4g0044511 30.864 486 283 13 9 454 34 506 1.84e-50 179
Msa1337550 MtrunA17_Chr7g0232331 30.128 468 282 14 15 448 6 462 2.83e-50 177
Msa1337550 MtrunA17_Chr5g0426431 29.668 482 285 15 12 452 9 477 5.00e-50 177
Msa1337550 MtrunA17_Chr3g0112771 27.133 457 299 8 16 454 13 453 1.97e-49 175
Msa1337550 MtrunA17_Chr7g0232341 30.277 469 280 14 15 448 6 462 1.97e-49 175
Msa1337550 MtrunA17_Chr3g0118711 27.557 479 295 14 15 452 13 480 3.59e-49 174
Msa1337550 MtrunA17_Chr7g0250001 29.158 463 282 12 12 449 3 444 5.15e-49 174
Msa1337550 MtrunA17_Chr6g0453961 28.810 479 292 14 15 452 19 489 5.67e-49 174
Msa1337550 MtrunA17_Chr5g0423981 28.266 467 274 13 15 452 10 444 6.30e-49 173
Msa1337550 MtrunA17_Chr3g0118771 27.824 478 291 15 15 450 21 486 1.58e-48 173
Msa1337550 MtrunA17_Chr3g0118701 27.941 476 297 14 15 452 15 482 2.16e-48 172
Msa1337550 MtrunA17_Chr6g0454121 30.115 435 262 11 55 452 49 478 3.57e-48 172
Msa1337550 MtrunA17_Chr6g0454191 28.151 476 299 12 15 452 10 480 1.71e-47 170
Msa1337550 MtrunA17_Chr6g0454261 29.814 483 281 17 15 452 10 479 2.09e-47 170
Msa1337550 MtrunA17_Chr6g0454181 28.810 479 291 14 15 452 10 479 2.22e-47 170
Msa1337550 MtrunA17_Chr6g0464871 28.512 477 279 17 11 453 19 467 3.37e-47 169
Msa1337550 MtrunA17_Chr8g0373301 27.549 461 300 11 15 448 9 462 6.41e-47 168
Msa1337550 MtrunA17_Chr7g0217881 28.387 465 293 12 15 452 10 461 3.48e-46 166
Msa1337550 MtrunA17_Chr6g0464921 26.522 460 303 11 15 453 11 456 4.51e-46 166
Msa1337550 MtrunA17_Chr6g0454141 27.975 479 295 14 15 452 10 479 4.68e-46 166
Msa1337550 MtrunA17_Chr6g0452771 31.282 390 239 9 89 452 93 479 7.20e-46 166
Msa1337550 MtrunA17_Chr7g0232401 28.233 464 289 12 14 443 5 458 1.07e-45 165
Msa1337550 MtrunA17_Chr8g0334851 28.782 476 281 14 15 448 6 465 1.31e-45 165
Msa1337550 MtrunA17_Chr8g0334861 27.601 471 289 16 15 449 6 460 2.95e-45 164
Msa1337550 MtrunA17_Chr6g0454131 30.093 432 260 11 58 452 52 478 3.03e-45 164
Msa1337550 MtrunA17_Chr6g0462531 30.702 456 279 17 26 451 15 463 3.31e-45 163
Msa1337550 MtrunA17_Chr6g0454321 28.601 486 290 15 10 453 5 475 3.37e-45 166
Msa1337550 MtrunA17_Chr8g0380531 27.815 453 287 13 14 441 9 446 3.99e-45 163
Msa1337550 MtrunA17_Chr2g0278711 27.273 473 302 12 15 452 11 476 7.00e-45 163
Msa1337550 MtrunA17_Chr6g0454361 28.310 491 278 15 15 452 11 480 7.90e-45 163
Msa1337550 MtrunA17_Chr4g0053501 26.293 464 302 11 14 449 10 461 8.05e-45 163
Msa1337550 MtrunA17_Chr6g0462551 33.231 325 193 8 144 448 140 460 1.24e-44 162
Msa1337550 MtrunA17_Chr6g0462571 38.276 290 153 9 179 448 174 457 1.35e-44 162
Msa1337550 MtrunA17_Chr6g0464861 29.039 458 276 13 11 441 7 442 1.37e-44 161
Msa1337550 MtrunA17_Chr8g0339461 29.228 479 273 18 15 446 6 465 1.56e-44 162
Msa1337550 MtrunA17_Chr8g0359821 28.330 473 299 11 15 452 10 477 1.57e-44 162
Msa1337550 MtrunA17_Chr8g0336331 27.893 484 296 13 10 452 5 476 1.88e-44 162
Msa1337550 MtrunA17_Chr6g0454151 29.009 424 253 12 73 452 58 477 2.06e-44 162
Msa1337550 MtrunA17_Chr1g0207981 30.362 359 217 10 115 449 120 469 2.15e-44 161
Msa1337550 MtrunA17_Chr8g0336731 33.051 354 208 10 121 449 138 487 2.28e-44 162
Msa1337550 MtrunA17_Chr6g0454301 28.125 480 291 13 15 452 263 730 2.39e-44 165
Msa1337550 MtrunA17_Chr6g0454301 37.245 196 118 2 259 450 33 227 5.57e-32 129
Msa1337550 MtrunA17_Chr6g0453951 27.708 480 295 14 15 452 57 526 3.40e-44 162
Msa1337550 MtrunA17_Chr6g0454331 29.375 480 289 16 15 452 7 478 4.51e-44 160
Msa1337550 MtrunA17_Chr6g0464841 28.726 463 276 15 9 441 5 443 6.04e-44 160
Msa1337550 MtrunA17_Chr7g0249931 27.813 471 283 18 14 454 39 482 1.68e-43 159
Msa1337550 MtrunA17_Chr3g0098111 27.101 476 292 13 14 450 8 467 1.86e-43 159
Msa1337550 MtrunA17_Chr8g0339451 34.160 363 196 13 114 441 98 452 2.19e-43 159
Msa1337550 MtrunA17_Chr8g0336741 31.503 346 206 9 121 440 119 459 4.02e-43 158
Msa1337550 MtrunA17_Chr4g0044501 29.854 479 284 15 12 450 7 473 4.27e-43 158
Msa1337550 MtrunA17_Chr8g0339631 32.153 367 205 13 114 446 106 462 4.38e-43 158
Msa1337550 MtrunA17_Chr8g0339601 35.948 306 160 9 167 440 17 318 1.12e-42 153
Msa1337550 MtrunA17_Chr1g0207971 27.753 454 284 11 14 441 7 442 2.22e-42 155
Msa1337550 MtrunA17_Chr6g0449931 34.069 317 171 9 163 448 154 463 3.02e-42 155
Msa1337550 MtrunA17_Chr7g0265151 29.545 484 284 18 14 450 8 481 3.59e-42 155
Msa1337550 MtrunA17_Chr6g0454341 27.158 475 302 14 15 452 10 477 3.62e-42 155
Msa1337550 MtrunA17_Chr7g0275681 30.453 486 281 19 9 450 6 478 4.83e-42 155
Msa1337550 MtrunA17_Chr3g0118661 28.067 481 285 16 15 450 13 477 6.43e-42 155
Msa1337550 MtrunA17_Chr6g0454211 27.737 411 259 9 78 452 358 766 6.83e-42 158
Msa1337550 MtrunA17_Chr6g0454211 31.556 225 106 10 163 371 46 238 6.43e-19 89.7
Msa1337550 MtrunA17_Chr5g0393591 26.327 471 286 12 1 449 1 432 8.27e-42 154
Msa1337550 MtrunA17_Chr6g0454201 28.744 414 251 10 78 452 72 480 2.08e-41 153
Msa1337550 MtrunA17_Chr8g0377941 27.902 448 294 11 15 439 7 448 2.08e-41 153
Msa1337550 MtrunA17_Chr8g0336691 28.692 474 283 16 14 448 918 1375 2.59e-41 157
Msa1337550 MtrunA17_Chr8g0336691 29.399 466 290 13 14 448 12 469 7.83e-41 156
Msa1337550 MtrunA17_Chr8g0336691 30.612 441 275 15 14 441 479 901 1.18e-40 155
Msa1337550 MtrunA17_Chr3g0078841 27.176 471 303 12 15 450 10 475 2.68e-41 153
Msa1337550 MtrunA17_Chr7g0249981 26.190 462 304 12 12 454 22 465 7.27e-41 152
Msa1337550 MtrunA17_Chr8g0347281 26.898 461 298 11 16 448 19 468 7.76e-41 152
Msa1337550 MtrunA17_Chr4g0032331 28.764 445 279 14 22 444 15 443 1.20e-40 150
Msa1337550 MtrunA17_Chr6g0454291 28.780 410 256 9 78 452 68 476 1.27e-40 151
Msa1337550 MtrunA17_Chr8g0336651 29.194 459 288 15 14 441 780 1232 1.49e-40 155
Msa1337550 MtrunA17_Chr8g0336651 27.966 472 287 14 14 448 5 460 1.52e-37 146
Msa1337550 MtrunA17_Chr8g0336651 32.510 243 143 6 213 448 542 770 3.09e-30 124
Msa1337550 MtrunA17_Chr3g0118721 33.462 260 146 5 215 452 35 289 1.50e-40 147
Msa1337550 MtrunA17_Chr6g0454221 40.816 196 111 2 259 450 34 228 1.55e-40 147
Msa1337550 MtrunA17_Chr5g0426401 33.000 300 174 7 175 452 16 310 1.94e-40 147
Msa1337550 MtrunA17_Chr3g0121991 27.083 480 289 14 15 449 79 542 2.58e-40 151
Msa1337550 MtrunA17_Chr6g0459311 34.247 292 169 7 179 448 177 467 2.77e-40 150
Msa1337550 MtrunA17_Chr4g0014061 30.040 496 263 17 14 454 8 474 2.84e-40 150
Msa1337550 MtrunA17_Chr6g0462541 31.988 322 197 6 145 448 142 459 3.74e-40 150
Msa1337550 MtrunA17_Chr4g0050341 25.833 480 300 14 15 449 19 487 5.04e-40 150
Msa1337550 MtrunA17_Chr1g0153451 27.332 461 303 11 14 448 5 459 5.26e-40 149
Msa1337550 MtrunA17_Chr1g0179901 27.383 493 300 14 8 450 7 491 5.72e-40 150
Msa1337550 MtrunA17_Chr7g0265041 30.505 495 272 18 12 450 8 486 6.76e-40 149
Msa1337550 MtrunA17_Chr4g0053321 25.862 464 304 11 14 449 25 476 1.02e-39 149
Msa1337550 MtrunA17_Chr8g0361371 27.083 480 284 12 16 449 8 467 1.49e-39 148
Msa1337550 MtrunA17_Chr1g0207951 25.949 474 315 13 5 452 645 1108 1.54e-39 152
Msa1337550 MtrunA17_Chr1g0207951 26.115 471 308 9 5 450 113 568 4.46e-38 147
Msa1337550 MtrunA17_Chr3g0079731 29.000 400 231 12 93 450 90 478 4.90e-39 147
Msa1337550 MtrunA17_Chr5g0419771 27.033 492 302 15 8 450 27 510 4.98e-39 147
Msa1337550 MtrunA17_Chr7g0218821 26.362 459 300 14 15 450 5 448 6.07e-39 146
Msa1337550 MtrunA17_Chr7g0218791 26.350 463 282 15 15 445 5 440 6.38e-39 146
Msa1337550 MtrunA17_Chr6g0462521 28.289 456 276 15 26 451 15 449 6.48e-39 146
Msa1337550 MtrunA17_Chr6g0486251 40.777 206 102 4 263 448 255 460 1.16e-38 145
Msa1337550 MtrunA17_Chr6g0486201 40.777 206 102 4 263 448 255 460 1.16e-38 145
Msa1337550 MtrunA17_Chr7g0243781 27.686 484 293 14 14 454 8 477 1.44e-38 145
Msa1337550 MtrunA17_Chr1g0207861 25.684 475 306 12 15 454 8 470 1.52e-38 145
Msa1337550 MtrunA17_Chr6g0454351 27.660 470 303 12 9 452 6 464 5.18e-38 144
Msa1337550 MtrunA17_Chr3g0122001 26.639 488 287 14 15 452 486 952 1.27e-37 146
Msa1337550 MtrunA17_Chr3g0122001 26.860 484 292 16 15 452 6 473 8.36e-36 140
Msa1337550 MtrunA17_Chr8g0339441 37.712 236 123 4 230 441 183 418 1.38e-37 142
Msa1337550 MtrunA17_Chr1g0159551 36.681 229 125 6 245 453 232 460 2.06e-37 142
Msa1337550 MtrunA17_Chr8g0335141 33.922 283 158 7 195 448 182 464 2.14e-37 142
Msa1337550 MtrunA17_Chr7g0218811 26.681 476 287 16 2 449 5 446 3.61e-37 141
Msa1337550 MtrunA17_Chr8g0365811 27.666 347 217 7 108 426 109 449 4.33e-37 144
Msa1337550 MtrunA17_Chr8g0365811 24.744 489 297 16 14 454 494 959 7.12e-34 135
Msa1337550 MtrunA17_Chr5g0412111 29.282 362 230 11 115 454 106 463 4.94e-37 141
Msa1337550 MtrunA17_Chr5g0440421 27.573 515 267 21 15 451 10 496 5.41e-37 141
Msa1337550 MtrunA17_Chr7g0265141 30.383 418 242 14 74 450 74 483 7.70e-37 141
Msa1337550 MtrunA17_Chr1g0173121 36.842 228 125 6 245 453 236 463 9.47e-37 140
Msa1337550 MtrunA17_Chr8g0347271 25.602 457 309 9 16 448 20 469 1.13e-36 140
Msa1337550 MtrunA17_Chr5g0412131 26.305 479 301 16 12 454 9 471 1.17e-36 140
Msa1337550 MtrunA17_Chr8g0355221 26.430 507 301 16 1 454 1 488 1.29e-36 140
Msa1337550 MtrunA17_Chr7g0265051 36.604 265 136 10 218 450 218 482 1.35e-36 140
Msa1337550 MtrunA17_Chr5g0442491 26.250 480 300 15 16 452 6 474 1.47e-36 140
Msa1337550 MtrunA17_Chr1g0153461 35.437 206 113 3 263 448 3 208 1.63e-36 134
Msa1337550 MtrunA17_Chr5g0442561 27.670 412 255 13 78 452 67 472 2.24e-36 139
Msa1337550 MtrunA17_Chr8g0334831 26.585 489 284 13 16 449 7 475 2.97e-36 139
Msa1337550 MtrunA17_Chr7g0243631 27.126 494 289 18 11 452 9 483 3.78e-36 139
Msa1337550 MtrunA17_Chr1g0161351 27.178 482 284 15 14 450 36 495 4.32e-36 139
Msa1337550 MtrunA17_Chr8g0335161 32.384 281 169 5 189 448 182 462 4.91e-36 138
Msa1337550 MtrunA17_Chr5g0412101 26.050 476 301 16 15 454 12 472 7.12e-36 138
Msa1337550 MtrunA17_Chr1g0207931 35.784 204 120 2 258 450 292 495 7.70e-36 138
Msa1337550 MtrunA17_Chr7g0232311 35.047 214 118 3 259 451 249 462 7.82e-36 138
Msa1337550 MtrunA17_Chr4g0066171 28.358 469 264 18 26 449 32 473 1.14e-35 137
Msa1337550 MtrunA17_Chr8g0382021 33.740 246 139 5 230 453 246 489 1.53e-35 137
Msa1337550 MtrunA17_Chr3g0118751 25.949 474 276 17 15 450 6 442 2.29e-35 136
Msa1337550 MtrunA17_Chr7g0265101 26.694 487 297 18 14 450 8 484 3.39e-35 137
Msa1337550 MtrunA17_Chr5g0403641 29.237 472 252 16 14 441 58 491 3.93e-35 136
Msa1337550 MtrunA17_Chr8g0361411 27.174 460 295 12 15 450 8 451 4.59e-35 135
Msa1337550 MtrunA17_Chr7g0275511 26.170 470 296 13 16 448 16 471 4.62e-35 136
Msa1337550 MtrunA17_Chr5g0442601 25.845 414 262 12 78 452 468 875 7.87e-35 138
Msa1337550 MtrunA17_Chr5g0442601 27.356 329 194 8 88 392 26 333 1.06e-23 104
Msa1337550 MtrunA17_Chr4g0066221 27.593 482 279 19 19 449 15 477 7.95e-35 135
Msa1337550 MtrunA17_Chr4g0066151 27.349 479 262 20 26 449 29 476 1.05e-34 135
Msa1337550 MtrunA17_Chr6g0454271 32.016 253 156 4 215 452 35 286 1.25e-34 130
Msa1337550 MtrunA17_Chr4g0011051 29.147 422 237 17 77 450 78 485 1.55e-34 134
Msa1337550 MtrunA17_Chr7g0243931 26.358 497 293 18 9 452 11 487 2.04e-34 134
Msa1337550 MtrunA17_Chr7g0243681 28.310 491 282 21 11 452 7 476 2.24e-34 134
Msa1337550 MtrunA17_Chr6g0454171 33.083 266 142 7 206 452 61 309 2.26e-34 130
Msa1337550 MtrunA17_Chr5g0442521 23.859 482 314 15 16 454 6 477 2.31e-34 134
Msa1337550 MtrunA17_Chr4g0044521 36.226 265 138 7 221 454 204 468 3.24e-34 133
Msa1337550 MtrunA17_Chr1g0207831 27.596 366 224 8 112 450 110 461 4.00e-34 133
Msa1337550 MtrunA17_Chr4g0066261 28.482 481 263 20 26 449 22 478 4.33e-34 133
Msa1337550 MtrunA17_Chr5g0442581 24.587 484 305 12 16 452 6 476 4.91e-34 134
Msa1337550 MtrunA17_Chr7g0243801 36.073 219 117 6 254 452 258 473 8.55e-34 132
Msa1337550 MtrunA17_Chr2g0329111 29.231 390 231 14 91 442 84 466 1.38e-33 132
Msa1337550 MtrunA17_Chr7g0249961 35.385 195 119 3 263 454 68 258 1.51e-33 127
Msa1337550 MtrunA17_Chr6g0463861 32.534 292 154 10 202 453 186 474 1.74e-33 131
Msa1337550 MtrunA17_Chr5g0448521 27.885 416 247 17 78 452 64 467 1.88e-33 131
Msa1337550 MtrunA17_Chr7g0218841 25.828 453 301 15 13 449 4 437 3.25e-33 130
Msa1337550 MtrunA17_Chr4g0066131 26.514 479 266 18 26 449 24 471 7.49e-33 130
Msa1337550 MtrunA17_Chr8g0374931 31.267 371 203 14 120 449 119 478 9.59e-33 129
Msa1337550 MtrunA17_Chr7g0243871 33.858 254 142 8 222 452 219 469 9.81e-33 129
Msa1337550 MtrunA17_Chr5g0420801 26.882 465 304 15 11 450 3 456 1.02e-32 129
Msa1337550 MtrunA17_Chr7g0232351 30.909 385 226 13 14 369 5 378 1.20e-32 127
Msa1337550 MtrunA17_Chr5g0442541 24.268 478 305 16 15 452 5 465 1.36e-32 129
Msa1337550 MtrunA17_Chr6g0463891 26.113 494 294 18 14 454 11 486 1.41e-32 129
Msa1337550 MtrunA17_Chr7g0218831 26.211 454 297 17 13 449 4 436 5.90e-32 126
Msa1337550 MtrunA17_Chr1g0165701 26.535 505 300 17 1 454 1 485 6.48e-32 127
Msa1337550 MtrunA17_Chr7g0243861 26.626 492 294 19 11 452 10 484 6.73e-32 127
Msa1337550 MtrunA17_Chr7g0218311 38.605 215 107 5 260 449 266 480 8.05e-32 127
Msa1337550 MtrunA17_Chr6g0463851 33.218 289 150 9 202 450 195 480 8.70e-32 127
Msa1337550 MtrunA17_Chr7g0243951 25.506 494 296 18 11 452 7 480 9.34e-32 127
Msa1337550 MtrunA17_Chr4g0066201 30.894 369 198 14 120 449 121 471 9.61e-32 126
Msa1337550 MtrunA17_Chr8g0374941 36.744 215 110 6 261 449 1200 1414 1.88e-31 128
Msa1337550 MtrunA17_Chr8g0374941 35.961 203 104 6 261 437 262 464 8.81e-29 120
Msa1337550 MtrunA17_Chr8g0374941 35.859 198 101 5 263 434 729 926 5.90e-25 108
Msa1337550 MtrunA17_Chr8g0374901 36.036 222 110 6 257 449 257 475 2.00e-31 125
Msa1337550 MtrunA17_Chr4g0066281 27.386 482 265 19 19 449 16 463 2.44e-31 125
Msa1337550 MtrunA17_Chr7g0243771 35.160 219 119 6 254 452 257 472 3.04e-31 125
Msa1337550 MtrunA17_Chr7g0243711 35.945 217 116 6 256 452 100 313 3.89e-31 122
Msa1337550 MtrunA17_Chr4g0044481 28.571 406 227 12 18 394 28 399 4.00e-31 124
Msa1337550 MtrunA17_Chr5g0401721 27.247 356 232 10 120 452 119 470 5.88e-31 124
Msa1337550 MtrunA17_Chr7g0235051 35.047 214 119 5 256 449 237 450 1.32e-30 123
Msa1337550 MtrunA17_Chr5g0401851 26.157 497 281 17 19 454 14 485 1.40e-30 123
Msa1337550 MtrunA17_Chr8g0374971 35.185 216 114 5 261 450 263 478 2.05e-30 123
Msa1337550 MtrunA17_Chr3g0079711 35.870 184 95 3 290 450 3 186 2.18e-30 116
Msa1337550 MtrunA17_Chr4g0060511 35.160 219 119 6 254 452 269 484 3.07e-30 122
Msa1337550 MtrunA17_Chr2g0294941 30.484 351 193 14 120 432 17 354 6.22e-30 120
Msa1337550 MtrunA17_Chr5g0419761 27.143 490 293 19 12 450 7 483 1.00e-29 121
Msa1337550 MtrunA17_Chr5g0410941 28.074 488 276 19 14 449 22 486 1.35e-29 120
Msa1337550 MtrunA17_Chr8g0367221 36.872 179 103 4 261 429 1543 1721 1.58e-29 122
Msa1337550 MtrunA17_Chr8g0367221 37.143 175 98 5 266 429 1058 1231 1.56e-27 116
Msa1337550 MtrunA17_Chr8g0367221 36.782 174 100 5 266 429 271 444 1.00e-26 114
Msa1337550 MtrunA17_Chr8g0355011 29.191 346 198 9 118 449 46 358 1.83e-29 118
Msa1337550 MtrunA17_Chr5g0429711 29.811 265 163 8 207 453 203 462 1.88e-29 120
Msa1337550 MtrunA17_Chr7g0243851 35.616 219 118 5 254 452 224 439 2.07e-29 119
Msa1337550 MtrunA17_Chr7g0241801 33.617 235 135 7 230 454 207 430 2.47e-29 119
Msa1337550 MtrunA17_Chr7g0243911 34.951 206 114 5 251 436 9 214 2.52e-29 114
Msa1337550 MtrunA17_Chr2g0307961 36.364 187 117 2 266 450 280 466 3.00e-29 119
Msa1337550 MtrunA17_Chr7g0265111 26.453 499 294 18 12 454 36 517 3.57e-29 120
Msa1337550 MtrunA17_Chr5g0448551 35.897 234 129 8 176 395 168 394 5.14e-29 118
Msa1337550 MtrunA17_Chr5g0429681 29.431 299 178 10 179 452 209 499 5.78e-29 119
Msa1337550 MtrunA17_Chr8g0350881 35.616 219 115 5 257 449 259 477 6.37e-29 119
Msa1337550 MtrunA17_Chr6g0454251 25.000 392 253 11 15 369 7 394 9.06e-29 117
Msa1337550 MtrunA17_Chr5g0416741 25.498 502 300 19 6 454 5 485 1.17e-28 118
Msa1337550 MtrunA17_Chr2g0294921 28.877 374 210 14 120 450 268 628 1.33e-28 119
Msa1337550 MtrunA17_Chr5g0428081 37.963 216 109 6 260 450 262 477 1.81e-28 117
Msa1337550 MtrunA17_Chr2g0302991 27.757 263 159 7 218 453 205 463 6.57e-28 115
Msa1337550 MtrunA17_Chr7g0241781 35.106 188 110 4 245 423 216 400 7.88e-28 115
Msa1337550 MtrunA17_Chr5g0442511 28.676 272 160 5 213 452 224 493 8.56e-28 115
Msa1337550 MtrunA17_Chr8g0370941 25.963 493 298 16 15 452 8 488 9.17e-28 115
Msa1337550 MtrunA17_Chr6g0454371 37.870 169 100 2 288 452 3 170 9.81e-28 108
Msa1337550 MtrunA17_Chr5g0409591 30.909 275 135 7 212 433 206 478 1.65e-27 114
Msa1337550 MtrunA17_Chr5g0431441 22.538 457 304 14 15 441 18 454 3.50e-27 113
Msa1337550 MtrunA17_Chr2g0279741 55.556 81 36 0 259 339 29 109 5.01e-27 105
Msa1337550 MtrunA17_Chr5g0431401 21.915 470 320 12 9 454 4 450 8.38e-27 112
Msa1337550 MtrunA17_Chr2g0294931 31.786 280 152 9 209 449 199 478 1.13e-26 112
Msa1337550 MtrunA17_Chr4g0069611 38.415 164 95 3 265 422 268 431 1.50e-26 111
Msa1337550 MtrunA17_Chr2g0302961 24.217 479 308 16 14 453 4 466 1.52e-26 111
Msa1337550 MtrunA17_Chr7g0243611 41.781 146 78 3 256 394 128 273 1.76e-26 108
Msa1337550 MtrunA17_Chr8g0369341 25.684 475 311 16 11 452 3 468 3.02e-26 110
Msa1337550 MtrunA17_Chr5g0416821 27.807 374 214 13 117 454 122 475 3.03e-26 110
Msa1337550 MtrunA17_Chr5g0431361 21.459 466 330 11 9 454 6 455 6.77e-26 109
Msa1337550 MtrunA17_Chr3g0106231 23.026 456 307 14 15 450 18 449 1.13e-25 109
Msa1337550 MtrunA17_Chr7g0243761 41.304 138 74 2 264 394 275 412 1.50e-25 108
Msa1337550 MtrunA17_Chr5g0431421 23.176 466 319 15 9 454 4 450 1.79e-25 108
Msa1337550 MtrunA17_Chr3g0092031 36.810 163 97 3 265 421 5 167 2.16e-25 103
Msa1337550 MtrunA17_Chr4g0039881 28.472 288 168 7 200 450 149 435 3.58e-25 107
Msa1337550 MtrunA17_Chr2g0302851 37.805 164 96 3 265 422 269 432 5.96e-25 107
Msa1337550 MtrunA17_Chr1g0196851 34.419 215 123 6 240 438 273 485 8.94e-25 106
Msa1337550 MtrunA17_Chr2g0278721 37.696 191 106 4 245 422 757 947 1.55e-24 107
Msa1337550 MtrunA17_Chr2g0278721 29.545 264 150 8 200 427 178 441 1.52e-22 101
Msa1337550 MtrunA17_Chr6g0466831 29.455 275 150 8 191 421 159 433 2.20e-24 105
Msa1337550 MtrunA17_Chr6g0454231 31.174 247 127 6 216 452 5 218 3.12e-24 105
Msa1337550 MtrunA17_Chr6g0466841 29.455 275 150 8 191 421 159 433 5.67e-24 103
Msa1337550 MtrunA17_Chr5g0431371 21.684 475 315 14 9 454 4 450 7.48e-24 103
Msa1337550 MtrunA17_Chr2g0278741 29.963 267 145 6 200 427 260 523 1.01e-23 103
Msa1337550 MtrunA17_Chr4g0042891 26.952 397 239 16 90 450 82 463 3.00e-23 102
Msa1337550 MtrunA17_Chr7g0243811 35.263 190 112 3 222 400 194 383 1.69e-22 99.0
Msa1337550 MtrunA17_Chr4g0042931 24.109 477 307 18 11 450 3 461 1.79e-22 99.8
Msa1337550 MtrunA17_Chr4g0040691 31.489 235 147 7 208 429 202 435 2.78e-22 99.0
Msa1337550 MtrunA17_Chr4g0029131 35.450 189 106 4 266 438 257 445 3.45e-22 99.8
Msa1337550 MtrunA17_Chr2g0283041 23.973 438 275 14 12 415 4 417 1.67e-21 96.7
Msa1337550 MtrunA17_Chr8g0336321 32.243 214 124 6 231 423 223 436 2.18e-21 96.3
Msa1337550 MtrunA17_Chr8g0336251 32.243 214 124 6 231 423 223 436 2.22e-21 96.3
Msa1337550 MtrunA17_Chr8g0337381 38.017 121 70 2 331 448 3 121 2.72e-21 89.7
Msa1337550 MtrunA17_Chr8g0336261 37.879 132 77 2 288 415 3 133 3.00e-21 89.4
Msa1337550 MtrunA17_Chr4g0040711 30.638 235 149 7 208 429 202 435 6.52e-21 95.1
Msa1337550 MtrunA17_Chr4g0029151 33.862 189 109 4 266 438 265 453 1.28e-20 94.0
Msa1337550 MtrunA17_Chr6g0464091 31.414 191 124 4 266 450 279 468 1.50e-20 94.0
Msa1337550 MtrunA17_Chr5g0427571 30.973 226 128 7 231 431 53 275 2.39e-20 91.3
Msa1337550 MtrunA17_Chr1g0207881 34.848 132 81 1 324 450 251 382 2.63e-20 92.4
Msa1337550 MtrunA17_Chr6g0482061 25.879 313 195 10 157 440 163 467 4.11e-20 92.8
Msa1337550 MtrunA17_Chr3g0106251 26.295 251 163 8 215 450 48 291 4.26e-20 90.9
Msa1337550 MtrunA17_Chr2g0319761 26.636 428 273 17 14 415 7 419 5.54e-20 92.0
Msa1337550 MtrunA17_Chr4g0066141 36.478 159 85 4 312 454 195 353 9.37e-20 90.5
Msa1337550 MtrunA17_Chr2g0319791 25.822 426 279 17 14 415 7 419 1.40e-19 90.9
Msa1337550 MtrunA17_Chr2g0319751 26.168 428 263 19 8 415 1 395 4.01e-19 90.5
Msa1337550 MtrunA17_Chr2g0319751 32.159 227 138 7 216 428 687 911 1.25e-17 85.9
Msa1337550 MtrunA17_Chr7g0250021 25.513 341 219 12 5 326 2 326 4.65e-19 87.8
Msa1337550 MtrunA17_Chr7g0231631 30.038 263 140 8 222 454 13 261 4.89e-19 87.0
Msa1337550 MtrunA17_Chr2g0319731 26.279 430 284 16 8 415 18 436 1.09e-18 88.2
Msa1337550 MtrunA17_Chr8g0357361 30.653 199 124 5 211 396 56 253 4.92e-18 84.0
Msa1337550 MtrunA17_Chr5g0431431 26.250 240 152 9 174 402 111 336 2.68e-17 83.2
Msa1337550 MtrunA17_Chr5g0432731 26.016 246 162 8 224 452 54 296 3.11e-17 82.0
Msa1337550 MtrunA17_Chr2g0319801 26.389 432 281 17 8 415 1 419 2.05e-16 81.3
Msa1337550 MtrunA17_Chr2g0321331 30.667 150 85 3 272 415 92 228 8.76e-13 68.6
Msa1337550 MtrunA17_Chr6g0453981 29.375 160 86 5 172 312 55 206 9.97e-13 67.8
Msa1337550 MtrunA17_Chr7g0243731 44.444 72 39 1 324 394 2 73 9.75e-12 60.8
Msa1337550 MtrunA17_Chr6g0454391 35.714 98 58 2 346 443 13 105 5.85e-11 60.1
Msa1337550 MtrunA17_Chr5g0442551 21.875 288 179 10 78 339 27 294 9.06e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337550 AT5G17050.1 51.230 447 211 4 15 454 12 458 1.99e-162 466
Msa1337550 AT5G17030.1 45.312 448 235 6 15 454 12 457 6.04e-136 399
Msa1337550 AT1G30530.1 45.682 440 232 5 15 450 12 448 1.18e-134 395
Msa1337550 AT5G17040.1 44.595 444 231 7 15 452 5 439 1.01e-132 390
Msa1337550 AT5G17040.2 44.481 308 166 3 150 452 30 337 7.63e-88 272
Msa1337550 AT5G59580.1 27.876 452 300 10 15 454 9 446 4.52e-53 184
Msa1337550 AT1G22400.1 27.883 477 291 13 15 449 13 478 2.10e-52 184
Msa1337550 AT3G46680.1 29.360 453 290 12 15 452 9 446 2.14e-51 180
Msa1337550 AT5G59590.1 26.682 446 307 9 15 449 10 446 6.03e-51 179
Msa1337550 AT3G46700.1 30.130 385 253 9 78 450 62 442 3.30e-50 177
Msa1337550 AT1G22360.1 28.000 475 298 12 15 452 10 477 1.56e-49 176
Msa1337550 AT5G05880.1 27.646 463 306 10 8 454 1 450 8.09e-49 173
Msa1337550 AT3G46660.1 26.638 458 302 9 16 454 15 457 1.53e-48 172
Msa1337550 AT1G22380.1 28.870 478 290 14 15 452 13 480 1.53e-48 173
Msa1337550 AT2G31790.1 26.395 466 300 13 15 453 8 457 1.92e-48 172
Msa1337550 AT1G05675.1 27.778 468 285 13 15 451 6 451 2.87e-47 169
Msa1337550 AT3G11340.1 31.034 348 223 7 119 454 104 446 6.92e-47 168
Msa1337550 AT1G22360.2 27.579 475 288 12 15 452 10 465 1.40e-46 167
Msa1337550 AT3G46670.1 27.626 438 297 9 15 441 9 437 2.82e-46 166
Msa1337550 AT1G05680.1 26.809 470 287 13 15 451 6 451 8.90e-46 165
Msa1337550 AT2G43820.1 28.416 461 290 14 15 454 7 448 1.43e-45 164
Msa1337550 AT2G36770.1 30.453 486 277 20 14 450 13 486 2.23e-45 165
Msa1337550 AT3G46650.1 27.586 435 282 10 15 440 10 420 3.05e-45 163
Msa1337550 AT3G16520.3 30.312 353 218 10 118 450 113 457 1.39e-44 162
Msa1337550 AT2G31750.1 27.556 450 289 14 15 441 8 443 1.44e-44 162
Msa1337550 AT1G78270.1 29.079 478 289 18 15 452 13 480 1.87e-44 162
Msa1337550 AT2G31750.2 27.371 464 299 15 15 454 8 457 2.30e-44 162
Msa1337550 AT3G46690.1 27.252 444 296 10 26 454 20 451 2.42e-44 161
Msa1337550 AT3G55700.1 30.688 378 241 11 92 454 81 452 5.07e-44 160
Msa1337550 AT5G05870.1 27.409 467 306 11 8 453 1 455 6.82e-44 160
Msa1337550 AT3G46720.1 27.578 446 297 10 15 450 9 438 1.31e-43 159
Msa1337550 AT2G15480.1 29.774 487 289 16 8 450 1 478 1.57e-43 159
Msa1337550 AT1G01420.2 29.462 465 291 14 6 441 2 458 2.93e-43 159
Msa1337550 AT1G01420.1 29.590 463 289 14 8 441 1 455 3.66e-43 159
Msa1337550 AT4G34131.1 28.980 490 282 16 14 454 9 481 5.02e-43 158
Msa1337550 AT2G43840.1 27.447 470 280 16 15 451 7 448 7.85e-43 157
Msa1337550 AT5G05860.1 27.790 457 293 12 11 448 5 443 9.13e-43 157
Msa1337550 AT2G15490.3 29.253 482 290 13 12 450 2 475 9.22e-43 157
Msa1337550 AT4G01070.1 29.873 472 263 16 15 441 8 456 1.12e-42 157
Msa1337550 AT1G22370.2 27.368 475 296 15 15 452 13 475 1.14e-42 157
Msa1337550 AT2G23260.1 26.395 466 295 14 15 453 10 454 1.48e-42 156
Msa1337550 AT2G36970.1 25.536 466 314 12 15 452 10 470 1.52e-42 157
Msa1337550 AT3G53160.1 28.367 490 294 17 8 450 1 480 1.59e-42 157
Msa1337550 AT2G23250.1 27.009 448 295 10 18 449 1 432 2.71e-42 155
Msa1337550 AT2G36780.1 29.938 481 286 17 14 450 13 486 3.20e-42 156
Msa1337550 AT1G22340.1 27.083 480 297 14 15 452 13 481 5.31e-42 155
Msa1337550 AT2G15480.2 29.376 497 288 16 8 450 1 488 5.31e-42 155
Msa1337550 AT2G15490.1 29.072 485 290 13 12 450 2 478 6.19e-42 155
Msa1337550 AT2G43840.2 27.234 470 281 16 15 451 7 448 6.88e-42 154
Msa1337550 AT3G16520.1 29.275 345 216 10 118 442 113 449 5.61e-41 152
Msa1337550 AT5G66690.1 29.476 458 278 14 15 439 7 452 5.97e-41 152
Msa1337550 AT3G16520.2 29.940 334 206 10 118 431 113 438 7.56e-41 151
Msa1337550 AT5G05890.1 27.426 474 297 16 8 454 1 454 1.64e-40 151
Msa1337550 AT5G05900.1 26.981 467 301 12 8 453 1 448 2.30e-40 150
Msa1337550 AT2G26480.1 25.821 457 301 12 15 452 8 445 5.19e-40 149
Msa1337550 AT1G01390.1 28.211 475 289 11 8 445 1 460 9.21e-40 149
Msa1337550 AT1G01390.2 28.211 475 289 11 8 445 18 477 1.20e-39 149
Msa1337550 AT5G38040.1 25.114 438 304 9 26 450 21 447 3.08e-39 147
Msa1337550 AT5G26310.1 28.105 459 283 13 15 439 7 452 9.14e-39 146
Msa1337550 AT3G50740.1 30.638 470 270 17 15 442 7 462 1.55e-38 146
Msa1337550 AT2G36800.1 28.455 492 284 19 14 452 11 487 1.56e-38 146
Msa1337550 AT2G28080.1 28.132 455 280 14 19 442 22 460 8.82e-38 144
Msa1337550 AT1G07240.1 30.671 313 179 11 163 450 174 473 9.47e-38 144
Msa1337550 AT4G15550.1 27.174 460 292 16 15 441 13 462 1.17e-37 143
Msa1337550 AT2G36760.1 27.500 480 299 14 14 450 13 486 2.50e-37 143
Msa1337550 AT2G36790.1 27.495 491 285 16 14 450 12 485 3.86e-37 142
Msa1337550 AT4G15490.1 26.170 470 312 12 8 449 1 463 5.98e-37 141
Msa1337550 AT2G36750.1 28.310 491 284 18 14 452 9 483 7.72e-37 141
Msa1337550 AT4G34135.1 27.593 482 300 12 14 454 10 483 8.70e-37 141
Msa1337550 AT4G15480.1 28.025 471 297 13 12 450 16 476 1.34e-36 140
Msa1337550 AT3G55710.1 27.155 464 313 11 8 454 1 456 5.12e-36 139
Msa1337550 AT2G29730.1 25.862 348 238 9 110 441 108 451 6.27e-36 138
Msa1337550 AT1G24100.1 27.079 469 286 16 15 450 11 456 2.99e-35 136
Msa1337550 AT3G21560.1 25.673 483 288 14 15 450 12 470 7.44e-35 136
Msa1337550 AT4G34138.1 27.216 485 285 16 19 453 13 479 8.96e-35 135
Msa1337550 AT2G29710.1 24.099 444 301 12 26 441 16 451 1.25e-34 135
Msa1337550 AT5G38010.1 24.729 461 303 11 15 450 10 451 1.41e-34 134
Msa1337550 AT1G05560.1 25.966 466 294 16 15 450 5 449 1.83e-34 134
Msa1337550 AT4G36770.1 37.500 208 109 3 260 446 250 457 1.97e-34 134
Msa1337550 AT4G15500.1 27.557 479 283 17 11 449 5 459 2.23e-34 134
Msa1337550 AT1G05560.2 25.966 466 294 16 15 450 55 499 2.66e-34 134
Msa1337550 AT2G30140.1 26.115 471 305 15 6 454 4 453 3.20e-34 133
Msa1337550 AT2G30140.2 25.745 470 307 14 6 454 4 452 4.34e-34 133
Msa1337550 AT3G02100.1 25.316 474 295 16 15 454 13 461 4.60e-34 133
Msa1337550 AT4G14090.1 28.384 458 289 18 15 450 13 453 5.49e-34 133
Msa1337550 AT1G07250.1 31.765 255 149 7 216 449 219 469 7.15e-34 133
Msa1337550 AT1G05530.1 24.459 462 309 12 15 450 5 452 3.84e-33 130
Msa1337550 AT1G07260.1 32.157 255 141 7 212 441 213 460 4.17e-33 130
Msa1337550 AT3G53150.1 32.710 321 167 9 179 452 191 509 6.15e-33 130
Msa1337550 AT2G29740.1 30.315 254 153 6 208 441 214 463 1.23e-32 129
Msa1337550 AT3G22250.1 35.652 230 130 8 231 448 233 456 1.85e-32 129
Msa1337550 AT2G30150.2 25.439 456 308 14 15 453 13 453 3.08e-32 128
Msa1337550 AT1G22370.1 30.132 302 179 9 176 452 11 305 3.66e-32 125
Msa1337550 AT3G21760.1 25.061 411 234 10 95 453 93 481 4.95e-32 128
Msa1337550 AT2G16890.2 27.505 469 297 18 15 450 7 465 5.67e-32 127
Msa1337550 AT2G29750.1 27.972 286 182 9 174 444 182 458 5.70e-32 127
Msa1337550 AT1G73880.1 26.763 482 300 17 7 454 6 468 8.46e-32 127
Msa1337550 AT2G18570.1 28.682 387 236 14 87 441 77 455 5.12e-31 125
Msa1337550 AT2G30150.1 25.221 452 306 14 19 453 1 437 8.07e-31 124
Msa1337550 AT3G21800.1 27.249 389 236 11 104 453 96 476 3.10e-30 122
Msa1337550 AT3G21790.1 27.882 373 227 9 117 453 113 479 3.71e-30 122
Msa1337550 AT2G18560.1 28.710 310 187 10 161 441 61 365 8.98e-30 120
Msa1337550 AT5G14860.1 25.732 478 302 15 15 450 7 473 2.77e-29 120
Msa1337550 AT2G16890.3 28.333 420 259 17 15 402 7 416 9.23e-29 117
Msa1337550 AT2G22590.1 28.041 485 253 21 1 428 1 446 1.81e-28 117
Msa1337550 AT3G21750.1 22.864 433 290 9 60 453 42 469 1.90e-28 117
Msa1337550 AT1G10400.1 24.736 473 304 17 13 449 3 459 2.05e-28 117
Msa1337550 AT4G15260.1 32.258 217 115 5 264 452 142 354 2.76e-28 115
Msa1337550 AT4G15280.1 24.570 407 259 12 84 452 77 473 8.47e-28 115
Msa1337550 AT4G15280.2 24.570 407 259 12 84 452 109 505 9.58e-28 115
Msa1337550 AT5G65550.1 32.911 237 144 6 208 432 209 442 1.88e-27 114
Msa1337550 AT1G06000.1 33.846 260 138 7 218 449 177 430 1.14e-26 112
Msa1337550 AT5G49690.1 37.853 177 103 4 266 438 267 440 1.90e-26 111
Msa1337550 AT3G21780.1 30.126 239 133 5 242 453 238 469 2.94e-25 108
Msa1337550 AT5G12890.1 26.975 367 231 12 97 435 105 462 4.34e-24 105
Msa1337550 AT5G37950.2 26.014 296 191 8 91 369 53 337 2.50e-23 100
Msa1337550 AT5G37950.1 25.256 293 203 6 91 369 53 343 4.62e-23 100
Msa1337550 AT5G53990.1 25.404 433 272 15 21 429 13 418 1.23e-22 100
Msa1337550 AT1G64910.1 26.218 431 271 15 21 429 13 418 1.71e-22 100
Msa1337550 AT5G03490.1 33.333 192 119 5 264 450 273 460 1.57e-21 97.4
Msa1337550 AT5G54010.1 25.682 440 276 18 21 433 13 428 2.61e-21 96.7
Msa1337550 AT1G51210.1 37.857 140 83 2 259 397 264 400 7.94e-21 94.7
Msa1337550 AT3G29630.1 32.234 273 157 11 180 430 156 422 4.47e-20 92.8
Msa1337550 AT2G22930.1 25.463 432 275 19 21 430 13 419 7.99e-20 92.0
Msa1337550 AT4G27570.1 30.833 240 151 8 205 431 189 426 1.03e-19 91.7
Msa1337550 AT1G50580.1 35.047 214 122 8 230 430 211 420 1.28e-19 91.3
Msa1337550 AT3G29630.2 35.593 177 102 5 266 430 220 396 1.03e-18 88.6
Msa1337550 AT4G27560.1 30.126 239 152 8 205 430 189 425 1.08e-18 88.6
Msa1337550 AT4G09500.2 25.761 427 278 17 21 429 13 418 1.15e-17 85.5
Msa1337550 AT1G64920.1 24.886 438 274 16 21 430 13 423 1.95e-16 81.6
Msa1337550 AT4G09500.1 35.329 167 97 5 274 429 227 393 5.62e-16 80.1
Msa1337550 AT4G01070.2 26.503 366 212 13 8 336 1 346 5.28e-13 70.5
Msa1337550 AT5G54060.1 30.409 171 107 5 266 426 268 436 8.05e-13 70.5

Find 108 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAACAATGTTACACAAAA+TGG 0.094461 tig0001526:-205685 Msa1337550:CDS
TTCCATTTATTTGGTCCTTT+AGG 0.142761 tig0001526:-205383 Msa1337550:CDS
CACCAACTGATGAGTGTTTA+AGG 0.162555 tig0001526:+205271 None:intergenic
TCCATTTATTTGGTCCTTTA+GGG 0.197862 tig0001526:-205382 Msa1337550:CDS
TATTGAAGCAAATGAGTTTA+TGG 0.246503 tig0001526:+205632 None:intergenic
CCTTGAGTTTCACAATCTTT+TGG 0.254936 tig0001526:+205028 None:intergenic
CCCCTAAAGGACCAAATAAA+TGG 0.265046 tig0001526:+205381 None:intergenic
AATGTGGATTTCCATTTATT+TGG 0.269480 tig0001526:-205392 Msa1337550:CDS
TTTAACTCATTCTCAATAAG+AGG 0.274886 tig0001526:+205606 None:intergenic
ATGCCAAATGGGTTCCTCTT+TGG 0.313159 tig0001526:-210200 Msa1337550:CDS
TTCAAAGCTGTTGAACAAAA+TGG 0.331388 tig0001526:-204997 Msa1337550:CDS
CTTGTTACATGTGGCTGTTT+TGG 0.331493 tig0001526:-210577 Msa1337550:CDS
AATACTTATAGAAAGTGTTT+TGG 0.331772 tig0001526:-205148 Msa1337550:CDS
AACAATTTGTGTACCTTCCT+TGG 0.350944 tig0001526:+210113 None:intergenic
AAAATACATAAGGGTGTTCA+TGG 0.355834 tig0001526:-204917 Msa1337550:three_prime_UTR
CCAGAAGGTTACGTACCTTC+TGG 0.361010 tig0001526:-210378 Msa1337550:CDS
AAGAATGAAAATGTAACTTT+AGG 0.369656 tig0001526:+210489 None:intergenic
TGGGTTCCTCTTTGGACTGC+AGG 0.370371 tig0001526:-210192 Msa1337550:CDS
TGGAAATCCACATTCCTCTA+AGG 0.370941 tig0001526:+205401 None:intergenic
ACATTATAATGCTTTATGTT+AGG 0.373608 tig0001526:+210414 None:intergenic
AAAAGTATCGATGCTCTTCC+TGG 0.374785 tig0001526:-205771 Msa1337550:CDS
AGAATCTACTAAGAAAGCTT+TGG 0.385242 tig0001526:-205088 Msa1337550:CDS
CAATATAAAGGAGAAGAAAA+TGG 0.390780 tig0001526:+210700 None:intergenic
GCAACTCATCTGGAAATGTT+TGG 0.392354 tig0001526:-204865 Msa1337550:three_prime_UTR
ACTCAATAACGCAACTCATC+TGG 0.392766 tig0001526:-204875 Msa1337550:three_prime_UTR
GCAACAATGTTACACAAAAT+GGG 0.395935 tig0001526:-205684 Msa1337550:CDS
TCATCTGGAAATGTTTGGTT+TGG 0.396033 tig0001526:-204860 Msa1337550:three_prime_UTR
AGTTGCGTTATTGAGTTGAT+TGG 0.402349 tig0001526:+204882 None:intergenic
CCAGAAGGTACGTAACCTTC+TGG 0.404812 tig0001526:+210378 None:intergenic
AGTTGGAAAGCACAATATAA+AGG 0.416448 tig0001526:+210688 None:intergenic
TCAGTGGTGTATATAAGCTT+TGG 0.422010 tig0001526:-205471 Msa1337550:CDS
GATGAAGCTGTGGCAGAGAC+AGG 0.424404 tig0001526:-210291 Msa1337550:CDS
CTGAGGAAATGCATGCCAAA+TGG 0.429903 tig0001526:-210212 Msa1337550:CDS
TGCATTGGCAGAGTCCTTAG+AGG 0.431105 tig0001526:-205415 Msa1337550:CDS
CCCTCCTTTCTCACTTGACA+TGG 0.441918 tig0001526:+205059 None:intergenic
CAGAAGGTTACGTACCTTCT+GGG 0.444962 tig0001526:-210377 Msa1337550:CDS
ATTTAGTAGCAATTTGAACT+TGG 0.447933 tig0001526:+205581 None:intergenic
AAGCATTATAATGTTCATGA+TGG 0.449928 tig0001526:-210405 Msa1337550:CDS
TTCCTCAGGATCACCCCTAA+AGG 0.463691 tig0001526:+205368 None:intergenic
GCCTTTAGCTCGGGAAAACC+AGG 0.481777 tig0001526:+205753 None:intergenic
TGAGTTTATGGCAACTGCAT+TGG 0.482638 tig0001526:+205644 None:intergenic
TTGTGTAACATTGTTGCAAA+TGG 0.485442 tig0001526:+205690 None:intergenic
TGAGGAAATGCATGCCAAAT+GGG 0.490298 tig0001526:-210211 Msa1337550:CDS
TTCAAATTGCTACTAAATGT+TGG 0.493383 tig0001526:-205576 Msa1337550:CDS
AGTCCAAAGAGGAACCCATT+TGG 0.494298 tig0001526:+210197 None:intergenic
AAAAGGTAAAATTGTTGCAT+GGG 0.495249 tig0001526:-205310 Msa1337550:CDS
GGGTTCCTCTTTGGACTGCA+GGG 0.506293 tig0001526:-210191 Msa1337550:CDS
ACCTCATGAGCTCACTGCAT+TGG 0.506888 tig0001526:-205430 Msa1337550:CDS
CTTGACAACACCACAGCGTA+AGG 0.511923 tig0001526:-205544 Msa1337550:CDS
TTAACCATGTCAAGTGAGAA+AGG 0.512542 tig0001526:-205063 Msa1337550:CDS
CAAAAGGTAAAATTGTTGCA+TGG 0.512626 tig0001526:-205311 Msa1337550:CDS
TCTGTGTTGGAATGCATTGT+CGG 0.519338 tig0001526:-205222 Msa1337550:CDS
GGAGCAGCATGTGTGCCAAA+TGG 0.522528 tig0001526:+210549 None:intergenic
GAAGAAAATGGCAGGACAGT+GGG 0.524050 tig0001526:+210712 None:intergenic
TGCTAAGCACCCGTGTTCAT+CGG 0.526621 tig0001526:+205518 None:intergenic
ATGCTTAAAGTTCTCTTGCA+TGG 0.530855 tig0001526:+210320 None:intergenic
AAATCAGAAGCCTTTAGCTC+GGG 0.531108 tig0001526:+205744 None:intergenic
GTCCTTTAGGGGTGATCCTG+AGG 0.536130 tig0001526:-205370 Msa1337550:CDS
ATGCAGTGAGCTCATGAGGT+GGG 0.537832 tig0001526:+205433 None:intergenic
AAATAAAGTATCATTTGTTG+TGG 0.541251 tig0001526:+210458 None:intergenic
CCATTTATTTGGTCCTTTAG+GGG 0.543071 tig0001526:-205381 Msa1337550:CDS
GAGCAGCATGTGTGCCAAAT+GGG 0.544907 tig0001526:+210550 None:intergenic
ATTGGTGTGGGTGTTGACAA+TGG 0.545588 tig0001526:-205123 Msa1337550:CDS
TTCTGGGTGGAATTCTGTGT+TGG 0.547328 tig0001526:-205235 Msa1337550:CDS
AGCATTATAATGTTCATGAT+GGG 0.553951 tig0001526:-210404 Msa1337550:CDS
GACCGGGTTTCCAAGTTCGA+TGG 0.555296 tig0001526:+204810 None:intergenic
CAAATCAGAAGCCTTTAGCT+CGG 0.556483 tig0001526:+205743 None:intergenic
TTAACTCATTCTCAATAAGA+GGG 0.560380 tig0001526:+205607 None:intergenic
AGAAATTGAGAGAAGAGAAG+AGG 0.562780 tig0001526:+210643 None:intergenic
CCATGTCAAGTGAGAAAGGA+GGG 0.563799 tig0001526:-205059 Msa1337550:CDS
GCCAATGCAGTGAGCTCATG+AGG 0.564169 tig0001526:+205429 None:intergenic
ATCCTTAAACACTCATCAGT+TGG 0.566039 tig0001526:-205273 Msa1337550:CDS
ACAAAATGGTACCTCTGCAA+TGG 0.571024 tig0001526:-204983 Msa1337550:CDS
TGCAGTGAGCTCATGAGGTG+GGG 0.571241 tig0001526:+205434 None:intergenic
AACCATCGAACTTGGAAACC+CGG 0.571606 tig0001526:-204812 Msa1337550:three_prime_UTR
CAGAGAAAAGACTGGCTCCA+AGG 0.573763 tig0001526:-210130 Msa1337550:CDS
TGTGGTGTTGTCAAGTTGAA+TGG 0.574430 tig0001526:+205552 None:intergenic
ATAAAGGAGAAGAAAATGGC+AGG 0.576931 tig0001526:+210704 None:intergenic
AAGGCTTCTGATTTGCCTGA+GGG 0.579054 tig0001526:-205735 Msa1337550:CDS
GTATATAAGCTTTGGAAGTG+TGG 0.580031 tig0001526:-205463 Msa1337550:CDS
GATCTTATCAGAGAAAAGAC+TGG 0.581356 tig0001526:-210138 Msa1337550:CDS
ATGGCAACTGCATTGGCTCG+TGG 0.586348 tig0001526:+205651 None:intergenic
GAAAAGACTGGCTCCAAGGA+AGG 0.586393 tig0001526:-210126 Msa1337550:intron
GCAGAGTCCTTAGAGGAATG+TGG 0.588171 tig0001526:-205408 Msa1337550:CDS
CGTAAGGTTTCCGATGAACA+CGG 0.589774 tig0001526:-205528 Msa1337550:CDS
ATGAACACGGGTGCTTAGCA+TGG 0.590839 tig0001526:-205515 Msa1337550:CDS
CCAAAAGATTGTGAAACTCA+AGG 0.593571 tig0001526:-205028 Msa1337550:CDS
AAATACATAAGGGTGTTCAT+GGG 0.601481 tig0001526:-204916 Msa1337550:three_prime_UTR
GTTCATGATGGGTTACCAGA+AGG 0.601738 tig0001526:-210393 Msa1337550:CDS
TGTTTAAGGATTTCAACTTG+AGG 0.610755 tig0001526:+205285 None:intergenic
AAAGGCTTCTGATTTGCCTG+AGG 0.612284 tig0001526:-205736 Msa1337550:CDS
CCACTGAAGAATTCTCATGT+TGG 0.621777 tig0001526:+205487 None:intergenic
GTTTGGTGCGGATCTAGCTG+AGG 0.622919 tig0001526:-210229 Msa1337550:CDS
ATGAAGCTGTGGCAGAGACA+GGG 0.623701 tig0001526:-210290 Msa1337550:CDS
GCAGTGAGCTCATGAGGTGG+GGG 0.627099 tig0001526:+205435 None:intergenic
TGAGGCCCTGCAGTCCAAAG+AGG 0.631764 tig0001526:+210186 None:intergenic
AATGCAGTGAGCTCATGAGG+TGG 0.632823 tig0001526:+205432 None:intergenic
GGTTCACGTGGATTCCCAGA+AGG 0.638759 tig0001526:+210363 None:intergenic
AGAAGAAAATGGCAGGACAG+TGG 0.641508 tig0001526:+210711 None:intergenic
ACCATGTCAAGTGAGAAAGG+AGG 0.644406 tig0001526:-205060 Msa1337550:CDS
GTAAGGTTTCCGATGAACAC+GGG 0.650703 tig0001526:-205527 Msa1337550:CDS
AGTAGTGAAATCCATTGCAG+AGG 0.654416 tig0001526:+204972 None:intergenic
GCATGTTATTGATGAAGCTG+TGG 0.657226 tig0001526:-210301 Msa1337550:CDS
ACATGTGTAAGAAGAGAGTG+AGG 0.678080 tig0001526:+210168 None:intergenic
GTGTTGGAATGCATTGTCGG+TGG 0.680590 tig0001526:-205219 Msa1337550:CDS
TGGTAACAACTTGTTACATG+TGG 0.688455 tig0001526:-210586 Msa1337550:CDS
CCAACATGAGAATTCTTCAG+TGG 0.690370 tig0001526:-205487 Msa1337550:CDS
TCATCGGAAACCTTACGCTG+TGG 0.690406 tig0001526:+205534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAAAAAAAAATAAAGT+TGG + tig0001526:204783-204802 None:intergenic 10.0%
!!! ATTTTGTTAATTAAAGTTAT+TGG - tig0001526:205384-205403 Msa1337550:CDS 10.0%
!! AAATTAAAATTAGACATATA+TGG - tig0001526:205430-205449 Msa1337550:CDS 10.0%
!!! AAGTTTTTTATATAACAAAT+TGG - tig0001526:206538-206557 Msa1337550:intron 10.0%
!!! TCAAAAAATTAAAATTTTGT+AGG - tig0001526:207855-207874 Msa1337550:intron 10.0%
!!! AAAAGTACTTTTTTTTATAA+GGG + tig0001526:208350-208369 None:intergenic 10.0%
!!! AAAAAGTACTTTTTTTTATA+AGG + tig0001526:208351-208370 None:intergenic 10.0%
!!! TTTGTTACTTATAATTTTAA+AGG + tig0001526:208570-208589 None:intergenic 10.0%
!!! TAAAAAACCTTTAAAATTTT+GGG - tig0001526:208806-208825 Msa1337550:intron 10.0%
!!! AAAAAATTCTGAATTATTTT+TGG - tig0001526:209282-209301 Msa1337550:intron 10.0%
!!! AAGTTTTAAAAAATACATAA+GGG - tig0001526:210525-210544 Msa1337550:CDS 10.0%
!!! AAATTCAAATTTTATTTCAA+CGG + tig0001526:210666-210685 None:intergenic 10.0%
!! ACTAAAAGAAAAGATAAATT+AGG + tig0001526:205495-205514 None:intergenic 15.0%
!!! TTTTTGTTTATGATAATGAT+CGG - tig0001526:206229-206248 Msa1337550:intron 15.0%
!! GATAACATATAAAATATTGT+TGG - tig0001526:206374-206393 Msa1337550:intron 15.0%
!! GTAAAATTGGAAAAAAAATA+GGG + tig0001526:206755-206774 None:intergenic 15.0%
!!! TTTTAATTTTTTGAAGAGAA+TGG + tig0001526:207849-207868 None:intergenic 15.0%
!!! TCAAATGTTTTTAGTTTTTT+AGG - tig0001526:208066-208085 Msa1337550:intron 15.0%
!!! CAAATGTTTTTAGTTTTTTA+GGG - tig0001526:208067-208086 Msa1337550:intron 15.0%
!!! AAATGTTTTTAGTTTTTTAG+GGG - tig0001526:208068-208087 Msa1337550:intron 15.0%
!!! AAATGATCTACATAATTTTT+AGG - tig0001526:208694-208713 Msa1337550:intron 15.0%
!!! ATTTTTTTATGTAGATTAAG+CGG - tig0001526:208717-208736 Msa1337550:intron 15.0%
!!! CTAAAAAACCTTTAAAATTT+TGG - tig0001526:208805-208824 Msa1337550:intron 15.0%
!!! ATTTAACCCTATTTTTTTTA+GGG + tig0001526:208991-209010 None:intergenic 15.0%
!!! TATTTAACCCTATTTTTTTT+AGG + tig0001526:208992-209011 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+TGG + tig0001526:209085-209104 None:intergenic 15.0%
!!! TGAAGATTGAAAATTTTATA+GGG - tig0001526:209398-209417 Msa1337550:intron 15.0%
!!! TAATGAGGTATTATTTTTTT+GGG + tig0001526:209501-209520 None:intergenic 15.0%
!!! TTAATGAGGTATTATTTTTT+TGG + tig0001526:209502-209521 None:intergenic 15.0%
!! CTATATTTCTCTTATATAAA+AGG - tig0001526:209523-209542 Msa1337550:intron 15.0%
!!! GAAGTTTTAAAAAATACATA+AGG - tig0001526:210524-210543 Msa1337550:CDS 15.0%
!! AAGAATGAAAATGTAACTTT+AGG + tig0001526:204965-204984 None:intergenic 20.0%
!!! AAATAAAGTATCATTTGTTG+TGG + tig0001526:204996-205015 None:intergenic 20.0%
!!! CAAATGATACTTTATTTTCT+AGG - tig0001526:204999-205018 Msa1337550:CDS 20.0%
!! ACATTATAATGCTTTATGTT+AGG + tig0001526:205040-205059 None:intergenic 20.0%
!!! TACAATTTTATGTGACTATT+TGG + tig0001526:205586-205605 None:intergenic 20.0%
!!! TAATGAATGAATCTAAAATG+TGG - tig0001526:205796-205815 Msa1337550:intron 20.0%
!!! TGTTGAATAACACATTTTAA+CGG + tig0001526:206613-206632 None:intergenic 20.0%
!!! TATATTTTAACACGACTTTT+TGG + tig0001526:206681-206700 None:intergenic 20.0%
!! GGTAAAATTGGAAAAAAAAT+AGG + tig0001526:206756-206775 None:intergenic 20.0%
!! AAAATACAAACAATTCATTC+CGG + tig0001526:206799-206818 None:intergenic 20.0%
!! ATGAGATTAGAAATAGATTT+AGG + tig0001526:207024-207043 None:intergenic 20.0%
!!! ATATTCATATCGTTTTTGTT+CGG - tig0001526:207998-208017 Msa1337550:intron 20.0%
!!! GTTATTTTTGGAATTTTTAC+AGG - tig0001526:208238-208257 Msa1337550:intron 20.0%
!!! ACACATAAGAAATTTTTTAG+TGG + tig0001526:208416-208435 None:intergenic 20.0%
!! TAGATCAATTACATATGATA+TGG - tig0001526:208522-208541 Msa1337550:intron 20.0%
!!! TTTTTTTATGTAGATTAAGC+GGG - tig0001526:208718-208737 Msa1337550:intron 20.0%
!!! TTTTATTAACTCTCGTAAAA+AGG + tig0001526:208927-208946 None:intergenic 20.0%
!! TAATCTTCCCTAAAAAAAAT+AGG - tig0001526:208981-209000 Msa1337550:intron 20.0%
!! AATCTTCCCTAAAAAAAATA+GGG - tig0001526:208982-209001 Msa1337550:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + tig0001526:209458-209477 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - tig0001526:209089-209108 Msa1337550:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - tig0001526:209366-209385 Msa1337550:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - tig0001526:209367-209386 Msa1337550:intron 20.0%
!!! AAATTTTCAATCTTCACTTT+TGG + tig0001526:209394-209413 None:intergenic 20.0%
!!! GTGAAGATTGAAAATTTTAT+AGG - tig0001526:209397-209416 Msa1337550:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG - tig0001526:209458-209477 Msa1337550:intron 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG + tig0001526:209485-209504 None:intergenic 20.0%
!! AAGAGAAATATAGATTAATG+AGG + tig0001526:209516-209535 None:intergenic 20.0%
!! AACAATCAAATCAAATTCTT+AGG + tig0001526:209637-209656 None:intergenic 20.0%
!!! AATACTTATAGAAAGTGTTT+TGG - tig0001526:210303-210322 Msa1337550:CDS 20.0%
! CAATATAAAGGAGAAGAAAA+TGG + tig0001526:204754-204773 None:intergenic 25.0%
! AGCTTCAAAAATGAAATGAA+TGG - tig0001526:204845-204864 Msa1337550:three_prime_UTR 25.0%
! AAGCATTATAATGTTCATGA+TGG - tig0001526:205046-205065 Msa1337550:CDS 25.0%
! AGCATTATAATGTTCATGAT+GGG - tig0001526:205047-205066 Msa1337550:CDS 25.0%
! GTCTTAATGAAGAGAAAAAT+TGG + tig0001526:205112-205131 None:intergenic 25.0%
!!! TGATTACTGATGCATTTTTT+TGG - tig0001526:205200-205219 Msa1337550:CDS 25.0%
! ATATATGGAATTCCAAACTT+GGG - tig0001526:205445-205464 Msa1337550:CDS 25.0%
! AGGAAGAAAAAATTACTTCA+CGG + tig0001526:205475-205494 None:intergenic 25.0%
! AATTTATACCCCTAAAAGAA+TGG + tig0001526:205555-205574 None:intergenic 25.0%
!!! ATTTTAGTACTATCATCACT+AGG - tig0001526:205635-205654 Msa1337550:CDS 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + tig0001526:205820-205839 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG - tig0001526:205746-205765 Msa1337550:CDS 25.0%
! CATTCATTAAATGATGTATG+TGG + tig0001526:205746-205765 None:intergenic 25.0%
!! GATTTCAAATTTTCAACCAT+TGG - tig0001526:205969-205988 Msa1337550:intron 25.0%
! ACATTCATCAAATATATGTG+AGG - tig0001526:206075-206094 Msa1337550:intron 25.0%
!!! ATCAACAATGCTACTTATTT+TGG - tig0001526:206495-206514 Msa1337550:intron 25.0%
!!! TCAACAATGCTACTTATTTT+GGG - tig0001526:206496-206515 Msa1337550:intron 25.0%
! TAACGGAATTGAATGAAAAA+AGG + tig0001526:206596-206615 None:intergenic 25.0%
! ATAAAGCTCAAAATTCGTTA+CGG + tig0001526:206649-206668 None:intergenic 25.0%
!!! AATTTTGAGCTTTATCTAAC+AGG - tig0001526:206654-206673 Msa1337550:intron 25.0%
!!! ATTTTGAGCTTTATCTAACA+GGG - tig0001526:206655-206674 Msa1337550:intron 25.0%
!!! TTGTATTTTTCAGATGATTC+CGG - tig0001526:206810-206829 Msa1337550:intron 25.0%
!! TTAATTCGGAAAGTATATTC+CGG + tig0001526:207588-207607 None:intergenic 25.0%
! ATTGACTGTATTAATGACTT+AGG - tig0001526:207752-207771 Msa1337550:intron 25.0%
!!! ACTTGTTTTAGGCTATAAAT+AGG - tig0001526:207775-207794 Msa1337550:intron 25.0%
!!! TTTGTTCGGATTTAATTTTC+CGG - tig0001526:208012-208031 Msa1337550:intron 25.0%
! AAAAATTCCAAAAATAACCC+TGG + tig0001526:208236-208255 None:intergenic 25.0%
! CTTTATCAATCAACTAAGTA+AGG - tig0001526:208662-208681 Msa1337550:intron 25.0%
!! TAGTTAGCCCAAAATTTTAA+AGG + tig0001526:208816-208835 None:intergenic 25.0%
!! AATTTTGGGCTAACTATTTA+AGG - tig0001526:208820-208839 Msa1337550:intron 25.0%
! TATAAGATAGAGTTGTCAAA+AGG + tig0001526:208893-208912 None:intergenic 25.0%
! AATAAAAGTTGTGTATTTCG+TGG - tig0001526:208940-208959 Msa1337550:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG + tig0001526:209457-209476 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - tig0001526:209426-209445 Msa1337550:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - tig0001526:209427-209446 Msa1337550:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG - tig0001526:209457-209476 Msa1337550:intron 25.0%
! TCAAATCAAATTCTTAGGAA+CGG + tig0001526:209632-209651 None:intergenic 25.0%
! TATTGAAGCAAATGAGTTTA+TGG + tig0001526:209822-209841 None:intergenic 25.0%
! TTAACTCATTCTCAATAAGA+GGG + tig0001526:209847-209866 None:intergenic 25.0%
! TTTAACTCATTCTCAATAAG+AGG + tig0001526:209848-209867 None:intergenic 25.0%
! ATTTAGTAGCAATTTGAACT+TGG + tig0001526:209873-209892 None:intergenic 25.0%
! TTCAAATTGCTACTAAATGT+TGG - tig0001526:209875-209894 Msa1337550:intron 25.0%
! AATGTGGATTTCCATTTATT+TGG - tig0001526:210059-210078 Msa1337550:intron 25.0%
! AAAAGGTAAAATTGTTGCAT+GGG - tig0001526:210141-210160 Msa1337550:CDS 25.0%
! AAAAAAGGTCTACTAATCAT+TGG + tig0001526:210262-210281 None:intergenic 25.0%
!!! ATGATTAGTAGACCTTTTTT+CGG - tig0001526:210262-210281 Msa1337550:CDS 25.0%
! AGTTGGAAAGCACAATATAA+AGG + tig0001526:204766-204785 None:intergenic 30.0%
!!! ACTGATGCATTTTTTTGGTT+TGG - tig0001526:205205-205224 Msa1337550:CDS 30.0%
CATATATGGAATTCCAAACT+TGG - tig0001526:205444-205463 Msa1337550:CDS 30.0%
! TCAGTTTTCACCATTCTTTT+AGG - tig0001526:205542-205561 Msa1337550:CDS 30.0%
! CAGTTTTCACCATTCTTTTA+GGG - tig0001526:205543-205562 Msa1337550:CDS 30.0%
! AGTTTTCACCATTCTTTTAG+GGG - tig0001526:205544-205563 Msa1337550:CDS 30.0%
AATAAAAACTACATCCTCTC+TGG + tig0001526:205842-205861 None:intergenic 30.0%
AACAGAAAAAGAATTCCTCT+TGG - tig0001526:205865-205884 Msa1337550:intron 30.0%
CTTCTATTATTGTTTCCAAG+AGG + tig0001526:205883-205902 None:intergenic 30.0%
CTCTTGGAAACAATAATAGA+AGG - tig0001526:205881-205900 Msa1337550:intron 30.0%
GTGCATTAATCACAAAATTC+AGG - tig0001526:205942-205961 Msa1337550:intron 30.0%
! TGGTTGAAAATTTGAAATCG+TGG + tig0001526:205968-205987 None:intergenic 30.0%
ATCCGGTGCAAATAAAATAA+AGG - tig0001526:206041-206060 Msa1337550:intron 30.0%
TCCGGTGCAAATAAAATAAA+GGG - tig0001526:206042-206061 Msa1337550:intron 30.0%
!!! ACCCTTTATTTTATTTGCAC+CGG + tig0001526:206046-206065 None:intergenic 30.0%
! TTGTTTATGATAATGATCGG+AGG - tig0001526:206232-206251 Msa1337550:intron 30.0%
! TGTTTATGATAATGATCGGA+GGG - tig0001526:206233-206252 Msa1337550:intron 30.0%
ATCGCTTATATTAAGACAGA+GGG + tig0001526:206283-206302 None:intergenic 30.0%
! TGTGTTATTCAACACGTTTA+AGG - tig0001526:206619-206638 Msa1337550:intron 30.0%
! GTGTTATTCAACACGTTTAA+GGG - tig0001526:206620-206639 Msa1337550:intron 30.0%
!!! TTTTTTTCCAATTTTACCCC+TGG - tig0001526:206758-206777 Msa1337550:intron 30.0%
!!! TGATTCCGGATTTTAAAATC+CGG - tig0001526:206824-206843 Msa1337550:intron 30.0%
!!! CTATTCCGGATTTTAAAATC+CGG + tig0001526:206832-206851 None:intergenic 30.0%
GTTCTGCTAAAATACTATTC+CGG + tig0001526:206846-206865 None:intergenic 30.0%
TTGGAAGGATATTTATAGAG+AGG - tig0001526:207413-207432 Msa1337550:intron 30.0%
TGGAAGGATATTTATAGAGA+GGG - tig0001526:207414-207433 Msa1337550:intron 30.0%
AAAAGTTGGCACTTATTTGT+AGG - tig0001526:207629-207648 Msa1337550:intron 30.0%
AAAGTTGGCACTTATTTGTA+GGG - tig0001526:207630-207649 Msa1337550:intron 30.0%
!! TCAAAAGTGTTGAATCATTC+CGG + tig0001526:207681-207700 None:intergenic 30.0%
!! AATGACTTAGGACTTGTTTT+AGG - tig0001526:207764-207783 Msa1337550:intron 30.0%
!! ATGAAGGTATTTGTTGAAGA+TGG + tig0001526:207804-207823 None:intergenic 30.0%
!!! AAATTTTGTAGGAGTGTTTG+TGG - tig0001526:207866-207885 Msa1337550:intron 30.0%
AAAAGAGATGAAGAGATTTC+CGG + tig0001526:208034-208053 None:intergenic 30.0%
!!! TTTTAGTTTTTTAGGGGTGT+CGG - tig0001526:208074-208093 Msa1337550:intron 30.0%
AAGTAACTAACAATCTGGTT+CGG - tig0001526:208195-208214 Msa1337550:intron 30.0%
!!! GTACTTTTTTTTATAAGGGC+CGG + tig0001526:208346-208365 None:intergenic 30.0%
!!! TTTTTTAGGGAAGATTAACG+AGG + tig0001526:208978-208997 None:intergenic 30.0%
! AGTCGAAGGAAAATTTTAGA+GGG + tig0001526:209056-209075 None:intergenic 30.0%
! AAGTCGAAGGAAAATTTTAG+AGG + tig0001526:209057-209076 None:intergenic 30.0%
! TTATATGGACTAAAAGTCGA+AGG + tig0001526:209070-209089 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - tig0001526:209413-209432 Msa1337550:intron 30.0%
TCTCTTATATAAAAGGCCAA+AGG - tig0001526:209530-209549 Msa1337550:intron 30.0%
AGAAATATAGACACTTCCTT+TGG + tig0001526:209549-209568 None:intergenic 30.0%
TAAAAGTTACTTGACAAGCT+GGG - tig0001526:209595-209614 Msa1337550:intron 30.0%
! ATATCTTTTATTACTCCCTC+AGG + tig0001526:209734-209753 None:intergenic 30.0%
TTGTGTAACATTGTTGCAAA+TGG + tig0001526:209764-209783 None:intergenic 30.0%
TGCAACAATGTTACACAAAA+TGG - tig0001526:209766-209785 Msa1337550:intron 30.0%
GCAACAATGTTACACAAAAT+GGG - tig0001526:209767-209786 Msa1337550:intron 30.0%
TTCCATTTATTTGGTCCTTT+AGG - tig0001526:210068-210087 Msa1337550:intron 30.0%
TCCATTTATTTGGTCCTTTA+GGG - tig0001526:210069-210088 Msa1337550:intron 30.0%
! AAAATTGCCAAAAGGGTTTT+TGG - tig0001526:210105-210124 Msa1337550:intron 30.0%
TTGGAAAGGACAAAAACAAA+AGG - tig0001526:210124-210143 Msa1337550:intron 30.0%
CAAAAGGTAAAATTGTTGCA+TGG - tig0001526:210140-210159 Msa1337550:CDS 30.0%
TGTTTAAGGATTTCAACTTG+AGG + tig0001526:210169-210188 None:intergenic 30.0%
!!! ATAGAAAGTGTTTTGGAGAT+TGG - tig0001526:210310-210329 Msa1337550:CDS 30.0%
AGAATCTACTAAGAAAGCTT+TGG - tig0001526:210363-210382 Msa1337550:CDS 30.0%
TTCAAAGCTGTTGAACAAAA+TGG - tig0001526:210454-210473 Msa1337550:CDS 30.0%
!! AAAATACATAAGGGTGTTCA+TGG - tig0001526:210534-210553 Msa1337550:CDS 30.0%
!! AAATACATAAGGGTGTTCAT+GGG - tig0001526:210535-210554 Msa1337550:CDS 30.0%
!! AAATTTTATTTCAACGGACC+GGG + tig0001526:210660-210679 None:intergenic 30.0%
!! CAAATTTTATTTCAACGGAC+CGG + tig0001526:210661-210680 None:intergenic 30.0%
ATAAAGGAGAAGAAAATGGC+AGG + tig0001526:204750-204769 None:intergenic 35.0%
AGAAATTGAGAGAAGAGAAG+AGG + tig0001526:204811-204830 None:intergenic 35.0%
!! TGGTAACAACTTGTTACATG+TGG - tig0001526:204865-204884 Msa1337550:three_prime_UTR 35.0%
! CAATTCTTTTCACTAGGCTA+AGG + tig0001526:204931-204950 None:intergenic 35.0%
! CTGTAGCAATTCTTTTCACT+AGG + tig0001526:204937-204956 None:intergenic 35.0%
! AAGAGAAAAATTGGTTCACG+TGG + tig0001526:205103-205122 None:intergenic 35.0%
ATGCTTAAAGTTCTCTTGCA+TGG + tig0001526:205134-205153 None:intergenic 35.0%
!!! TGCATTTTTTTGGTTTGGTG+CGG - tig0001526:205210-205229 Msa1337550:CDS 35.0%
GATCTTATCAGAGAAAAGAC+TGG - tig0001526:205313-205332 Msa1337550:CDS 35.0%
AACAATTTGTGTACCTTCCT+TGG + tig0001526:205341-205360 None:intergenic 35.0%
GATCGCTTATATTAAGACAG+AGG + tig0001526:206284-206303 None:intergenic 35.0%
!!! CAATGCTACTTATTTTGGGA+CGG - tig0001526:206500-206519 Msa1337550:intron 35.0%
TTATTCAACACGTTTAAGGG+CGG - tig0001526:206623-206642 Msa1337550:intron 35.0%
TCATTCCGGAATATGAAATC+CGG + tig0001526:206785-206804 None:intergenic 35.0%
GCTCTTAGGAGATTAGAATT+AGG + tig0001526:207052-207071 None:intergenic 35.0%
ACTTTCAGGGTTTGTATGAA+CGG + tig0001526:207293-207312 None:intergenic 35.0%
GAAAACCATATGGTTGTAGA+AGG - tig0001526:207350-207369 Msa1337550:intron 35.0%
TTCTTCCTTCTACAACCATA+TGG + tig0001526:207358-207377 None:intergenic 35.0%
GGAAGGATATTTATAGAGAG+GGG - tig0001526:207415-207434 Msa1337550:intron 35.0%
! GTTTTACGTGACTGCATTTA+TGG + tig0001526:207463-207482 None:intergenic 35.0%
! GTATTCCGGATTGTATTTTC+CGG + tig0001526:207554-207573 None:intergenic 35.0%
AAGTATATTCCGGAAACCAA+AGG + tig0001526:207578-207597 None:intergenic 35.0%
TTTCCGAATTAATGCGATTG+TGG - tig0001526:207596-207615 Msa1337550:intron 35.0%
TCACCACAATCGCATTAATT+CGG + tig0001526:207602-207621 None:intergenic 35.0%
ACATTCCGGAATGTATAATC+CGG - tig0001526:207659-207678 Msa1337550:intron 35.0%
TCATTCCGGATTATACATTC+CGG + tig0001526:207667-207686 None:intergenic 35.0%
AGTCAATGAAAACGTGTTAG+TGG + tig0001526:207739-207758 None:intergenic 35.0%
TGAAGAGAATGGAAGAAAAG+AGG + tig0001526:207838-207857 None:intergenic 35.0%
AATTGCAGGGTTTATAGGAA+CGG + tig0001526:207910-207929 None:intergenic 35.0%
AATGCAATTGCAGGGTTTAT+AGG + tig0001526:207915-207934 None:intergenic 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + tig0001526:207975-207994 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + tig0001526:207976-207995 None:intergenic 35.0%
GTGTCTTTCTTTGATGTCAA+AGG + tig0001526:207975-207994 None:intergenic 35.0%
TACTTCCGGAACATAAAATC+CGG + tig0001526:208180-208199 None:intergenic 35.0%
ACCAGATTGTTAGTTACTTC+CGG + tig0001526:208194-208213 None:intergenic 35.0%
TTCCCCTAAAAAAAACTACC+CGG - tig0001526:208294-208313 Msa1337550:intron 35.0%
!! AAAAAGCTCAGTACCGATTT+GGG + tig0001526:208776-208795 None:intergenic 35.0%
!! TAAAAAGCTCAGTACCGATT+TGG + tig0001526:208777-208796 None:intergenic 35.0%
!! AATCGGTACTGAGCTTTTTA+AGG - tig0001526:208777-208796 Msa1337550:intron 35.0%
AAGATAGAGTTGTCAAAAGG+AGG + tig0001526:208890-208909 None:intergenic 35.0%
CTCTCGTAAAAAGGACAAAA+AGG + tig0001526:208918-208937 None:intergenic 35.0%
CTAAAAGTTACTTGACAAGC+TGG - tig0001526:209594-209613 Msa1337550:intron 35.0%
! CATCGATACTTTTGACATCA+TGG + tig0001526:209673-209692 None:intergenic 35.0%
TCAGTGGTGTATATAAGCTT+TGG - tig0001526:209980-209999 Msa1337550:intron 35.0%
!! GTATATAAGCTTTGGAAGTG+TGG - tig0001526:209988-210007 Msa1337550:intron 35.0%
CCATTTATTTGGTCCTTTAG+GGG - tig0001526:210070-210089 Msa1337550:intron 35.0%
CTGAGGAAAAATTGCCAAAA+GGG - tig0001526:210098-210117 Msa1337550:intron 35.0%
ATCCTTAAACACTCATCAGT+TGG - tig0001526:210178-210197 Msa1337550:CDS 35.0%
TTAACCATGTCAAGTGAGAA+AGG - tig0001526:210388-210407 Msa1337550:CDS 35.0%
! CCTTGAGTTTCACAATCTTT+TGG + tig0001526:210426-210445 None:intergenic 35.0%
CCAAAAGATTGTGAAACTCA+AGG - tig0001526:210423-210442 Msa1337550:CDS 35.0%
!! AGTTGCGTTATTGAGTTGAT+TGG + tig0001526:210572-210591 None:intergenic 35.0%
TCATCTGGAAATGTTTGGTT+TGG - tig0001526:210591-210610 Msa1337550:CDS 35.0%
! TGATTTTGAACCATCGAACT+TGG - tig0001526:210631-210650 Msa1337550:exon 35.0%
! CTTGTTACATGTGGCTGTTT+TGG - tig0001526:204874-204893 Msa1337550:three_prime_UTR 40.0%
GCATGTTATTGATGAAGCTG+TGG - tig0001526:205150-205169 Msa1337550:CDS 40.0%
TGAGGAAATGCATGCCAAAT+GGG - tig0001526:205240-205259 Msa1337550:CDS 40.0%
ACATGTGTAAGAAGAGAGTG+AGG + tig0001526:205286-205305 None:intergenic 40.0%
ATCATAAACCATACACCCTC+CGG - tig0001526:205689-205708 Msa1337550:CDS 40.0%
TGCTTATAATAGTGACCGGA+GGG + tig0001526:205707-205726 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + tig0001526:205708-205727 None:intergenic 40.0%
GCTTATAATAGTGACCAGAG+AGG - tig0001526:205825-205844 Msa1337550:intron 40.0%
! TAACGTGCCTATGTGACTTT+TGG + tig0001526:206000-206019 None:intergenic 40.0%
TAGTCCAGTCTAGTAGTCTT+TGG - tig0001526:206018-206037 Msa1337550:intron 40.0%
AGTCTAGTAGTCTTTGGATC+CGG - tig0001526:206024-206043 Msa1337550:intron 40.0%
TATGTCCTATCACATAGCAG+TGG + tig0001526:207079-207098 None:intergenic 40.0%
GTTTGTATGAACGGTCAATG+AGG + tig0001526:207284-207303 None:intergenic 40.0%
! AACCCTGAAAGTTTTCAACG+AGG - tig0001526:207301-207320 Msa1337550:intron 40.0%
!! CGTTGGCCTTTCATAGATAA+GGG + tig0001526:207327-207346 None:intergenic 40.0%
!! TCGTTGGCCTTTCATAGATA+AGG + tig0001526:207328-207347 None:intergenic 40.0%
TATCTATGAAAGGCCAACGA+TGG - tig0001526:207328-207347 Msa1337550:intron 40.0%
! ACCATATGGTTTTCCATCGT+TGG + tig0001526:207344-207363 None:intergenic 40.0%
ATGGTTGTAGAAGGAAGAAG+AGG - tig0001526:207359-207378 Msa1337550:intron 40.0%
AGGATATTTATAGAGAGGGG+CGG - tig0001526:207418-207437 Msa1337550:intron 40.0%
TACAATCCGGAATACACCTT+TGG - tig0001526:207559-207578 Msa1337550:intron 40.0%
TTGAAAGAGAGCCATCAATG+TGG - tig0001526:207697-207716 Msa1337550:intron 40.0%
TGAAAGAGAGCCATCAATGT+GGG - tig0001526:207698-207717 Msa1337550:intron 40.0%
AGAGGTGAAGTGAAGAATGA+AGG + tig0001526:207820-207839 None:intergenic 40.0%
AATTGCATTGCAGCTTGTGT+GGG - tig0001526:207926-207945 Msa1337550:intron 40.0%
TGTCAAAGGTCTCTGTTGAA+CGG + tig0001526:208121-208140 None:intergenic 40.0%
! ACAAAAAAGCGCACAACATC+TGG - tig0001526:208153-208172 Msa1337550:intron 40.0%
TCCGGAAGTAACTAACAATC+TGG - tig0001526:208190-208209 Msa1337550:intron 40.0%
!! CTGGTTCGGAAAACATAATC+CGG - tig0001526:208209-208228 Msa1337550:intron 40.0%
TTCCAAAAATAACCCTGGTC+CGG + tig0001526:208231-208250 None:intergenic 40.0%
TCCCCTAAAAAAAACTACCC+GGG - tig0001526:208295-208314 Msa1337550:intron 40.0%
!!! AGCCCGGGTAGTTTTTTTTA+GGG + tig0001526:208300-208319 None:intergenic 40.0%
! CCTATATGGGCTAAATGAAC+CGG - tig0001526:208324-208343 Msa1337550:intron 40.0%
! CGATTTGGGCTAACTTGTAT+GGG + tig0001526:208762-208781 None:intergenic 40.0%
CCATACAAGTTAGCCCAAAT+CGG - tig0001526:208760-208779 Msa1337550:intron 40.0%
!!! GGTACTGAGCTTTTTAAGGT+CGG - tig0001526:208781-208800 Msa1337550:intron 40.0%
!!! GTACTGAGCTTTTTAAGGTC+GGG - tig0001526:208782-208801 Msa1337550:intron 40.0%
ATAGAGTTGTCAAAAGGAGG+TGG + tig0001526:208887-208906 None:intergenic 40.0%
!! AAAAGTATCGATGCTCTTCC+TGG - tig0001526:209680-209699 Msa1337550:intron 40.0%
TGAGTTTATGGCAACTGCAT+TGG + tig0001526:209810-209829 None:intergenic 40.0%
!! TGTGGTGTTGTCAAGTTGAA+TGG + tig0001526:209902-209921 None:intergenic 40.0%
CCACTGAAGAATTCTCATGT+TGG + tig0001526:209967-209986 None:intergenic 40.0%
CCAACATGAGAATTCTTCAG+TGG - tig0001526:209964-209983 Msa1337550:intron 40.0%
TGGAAATCCACATTCCTCTA+AGG + tig0001526:210053-210072 None:intergenic 40.0%
CCCCTAAAGGACCAAATAAA+TGG + tig0001526:210073-210092 None:intergenic 40.0%
! CCTTTTGGCAATTTTTCCTC+AGG + tig0001526:210100-210119 None:intergenic 40.0%
CCTGAGGAAAAATTGCCAAA+AGG - tig0001526:210097-210116 Msa1337550:intron 40.0%
!! TGCCAAAAGGGTTTTTGGAA+AGG - tig0001526:210110-210129 Msa1337550:intron 40.0%
! GTCCTTTCCAAAAACCCTTT+TGG + tig0001526:210115-210134 None:intergenic 40.0%
CACCAACTGATGAGTGTTTA+AGG + tig0001526:210183-210202 None:intergenic 40.0%
!! GTGTGTTTTTGACGCATTCT+GGG - tig0001526:210200-210219 Msa1337550:CDS 40.0%
TCTGTGTTGGAATGCATTGT+CGG - tig0001526:210229-210248 Msa1337550:CDS 40.0%
!!! AGACCTTTTTTCGGAGATCA+AGG - tig0001526:210271-210290 Msa1337550:CDS 40.0%
!!! GACCTTTTTTCGGAGATCAA+GGG - tig0001526:210272-210291 Msa1337550:CDS 40.0%
AACCCTTGATCTCCGAAAAA+AGG + tig0001526:210277-210296 None:intergenic 40.0%
!!! AAGTGTTTTGGAGATTGGTG+TGG - tig0001526:210315-210334 Msa1337550:CDS 40.0%
!!! AGTGTTTTGGAGATTGGTGT+GGG - tig0001526:210316-210335 Msa1337550:CDS 40.0%
ACAAAATGGTACCTCTGCAA+TGG - tig0001526:210468-210487 Msa1337550:CDS 40.0%
AGTAGTGAAATCCATTGCAG+AGG + tig0001526:210482-210501 None:intergenic 40.0%
ACTCAATAACGCAACTCATC+TGG - tig0001526:210576-210595 Msa1337550:CDS 40.0%
GCAACTCATCTGGAAATGTT+TGG - tig0001526:210586-210605 Msa1337550:CDS 40.0%
GAAGAAAATGGCAGGACAGT+GGG + tig0001526:204742-204761 None:intergenic 45.0%
AGAAGAAAATGGCAGGACAG+TGG + tig0001526:204743-204762 None:intergenic 45.0%
!!! GCTGTTTTGGCATTCCCATT+TGG - tig0001526:204887-204906 Msa1337550:three_prime_UTR 45.0%
! CTTTTCACTAGGCTAAGGAG+TGG + tig0001526:204926-204945 None:intergenic 45.0%
!! GTTCATGATGGGTTACCAGA+AGG - tig0001526:205058-205077 Msa1337550:CDS 45.0%
CAGAAGGTTACGTACCTTCT+GGG - tig0001526:205074-205093 Msa1337550:CDS 45.0%
CTGAGGAAATGCATGCCAAA+TGG - tig0001526:205239-205258 Msa1337550:CDS 45.0%
! ATGCCAAATGGGTTCCTCTT+TGG - tig0001526:205251-205270 Msa1337550:CDS 45.0%
AGTCCAAAGAGGAACCCATT+TGG + tig0001526:205257-205276 None:intergenic 45.0%
GGATCCAAAGACTACTAGAC+TGG + tig0001526:206025-206044 None:intergenic 45.0%
!!! GCTACTTATTTTGGGACGGA+TGG - tig0001526:206504-206523 Msa1337550:intron 45.0%
! TTCCAATTTTACCCCTGGTC+CGG - tig0001526:206763-206782 Msa1337550:intron 45.0%
GAATATGAAATCCGGACCAG+GGG + tig0001526:206777-206796 None:intergenic 45.0%
GGAATATGAAATCCGGACCA+GGG + tig0001526:206778-206797 None:intergenic 45.0%
CTGGTCCGGATTTCATATTC+CGG - tig0001526:206777-206796 Msa1337550:intron 45.0%
ATAGCAGTGGTTAGGCTCTT+AGG + tig0001526:207066-207085 None:intergenic 45.0%
CCTATCACATAGCAGTGGTT+AGG + tig0001526:207074-207093 None:intergenic 45.0%
CCTAACCACTGCTATGTGAT+AGG - tig0001526:207071-207090 Msa1337550:intron 45.0%
GATAGGACATAGCAGTAGCT+TGG - tig0001526:207088-207107 Msa1337550:intron 45.0%
CATAGCAGTAGCTTGGCTAT+TGG - tig0001526:207095-207114 Msa1337550:intron 45.0%
CTTGGCTATTGGAGGAAAAC+CGG - tig0001526:207106-207125 Msa1337550:intron 45.0%
AGAAGAAACAAATGCCCCTG+AGG - tig0001526:207154-207173 Msa1337550:intron 45.0%
GAAGAAACAAATGCCCCTGA+GGG - tig0001526:207155-207174 Msa1337550:intron 45.0%
GGTTAATCTGAGGGTCATGT+GGG + tig0001526:207236-207255 None:intergenic 45.0%
GTATGAACGGTCAATGAGGA+TGG + tig0001526:207280-207299 None:intergenic 45.0%
GGCCTCGTTGAAAACTTTCA+GGG + tig0001526:207306-207325 None:intergenic 45.0%
ACGAGGCCCTTATCTATGAA+AGG - tig0001526:207318-207337 Msa1337550:intron 45.0%
GCCAACGATGGAAAACCATA+TGG - tig0001526:207340-207359 Msa1337550:intron 45.0%
GTTGTAGAAGGAAGAAGAGG+AGG - tig0001526:207362-207381 Msa1337550:intron 45.0%
GGATATTTATAGAGAGGGGC+GGG - tig0001526:207419-207438 Msa1337550:intron 45.0%
TGACCACTGTCAAAAACGTG+TGG - tig0001526:207497-207516 Msa1337550:intron 45.0%
! CGGAAACCAAAGGTGTATTC+CGG + tig0001526:207568-207587 None:intergenic 45.0%
! CGGAATACACCTTTGGTTTC+CGG - tig0001526:207566-207585 Msa1337550:intron 45.0%
TAATGCGATTGTGGTGAACG+AGG - tig0001526:207605-207624 Msa1337550:intron 45.0%
AATGCGATTGTGGTGAACGA+GGG - tig0001526:207606-207625 Msa1337550:intron 45.0%
GGCACTTATTTGTAGGGCTA+AGG - tig0001526:207636-207655 Msa1337550:intron 45.0%
TTGTAGGGCTAAGGACATTC+CGG - tig0001526:207645-207664 Msa1337550:intron 45.0%
!! TAGGAGTGTTTGTGGTGTCA+TGG - tig0001526:207874-207893 Msa1337550:intron 45.0%
CAAGCTGCAATGCAATTGCA+GGG + tig0001526:207923-207942 None:intergenic 45.0%
ACAAGCTGCAATGCAATTGC+AGG + tig0001526:207924-207943 None:intergenic 45.0%
CAATTGCATTGCAGCTTGTG+TGG - tig0001526:207925-207944 Msa1337550:intron 45.0%
ATTGCATTGCAGCTTGTGTG+GGG - tig0001526:207927-207946 Msa1337550:intron 45.0%
!!! TAGTTTTTTAGGGGTGTCGG+TGG - tig0001526:208077-208096 Msa1337550:intron 45.0%
! CTGGTCCGGATTTTATGTTC+CGG - tig0001526:208172-208191 Msa1337550:intron 45.0%
GGAAAACATAATCCGGACCA+GGG - tig0001526:208216-208235 Msa1337550:intron 45.0%
!! ATCCGGACCAGGGTTATTTT+TGG - tig0001526:208226-208245 Msa1337550:intron 45.0%
!!! GCCCGGGTAGTTTTTTTTAG+GGG + tig0001526:208299-208318 None:intergenic 45.0%
!!! GAGCCCGGGTAGTTTTTTTT+AGG + tig0001526:208301-208320 None:intergenic 45.0%
CCGGTTCATTTAGCCCATAT+AGG + tig0001526:208327-208346 None:intergenic 45.0%
!! CCGATTTGGGCTAACTTGTA+TGG + tig0001526:208763-208782 None:intergenic 45.0%
CGTAAGGTTTCCGATGAACA+CGG - tig0001526:209923-209942 Msa1337550:intron 45.0%
GTAAGGTTTCCGATGAACAC+GGG - tig0001526:209924-209943 Msa1337550:intron 45.0%
!! GGTGTGTTTTTGACGCATTC+TGG - tig0001526:210199-210218 Msa1337550:CDS 45.0%
!! TGTTTTTGACGCATTCTGGG+TGG - tig0001526:210203-210222 Msa1337550:CDS 45.0%
TTCTGGGTGGAATTCTGTGT+TGG - tig0001526:210216-210235 Msa1337550:CDS 45.0%
!! ATTGGTGTGGGTGTTGACAA+TGG - tig0001526:210328-210347 Msa1337550:CDS 45.0%
ACCATGTCAAGTGAGAAAGG+AGG - tig0001526:210391-210410 Msa1337550:CDS 45.0%
CCATGTCAAGTGAGAAAGGA+GGG - tig0001526:210392-210411 Msa1337550:CDS 45.0%
AACCATCGAACTTGGAAACC+CGG - tig0001526:210639-210658 Msa1337550:five_prime_UTR 45.0%
!! CAAAAATTAAATTAAAAATA+GGG + tig0001526:209116-209135 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG + tig0001526:209117-209136 None:intergenic 5.0%
!!! TAAAAAATTCTATTTTTTTT+AGG + tig0001526:209190-209209 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG + tig0001526:209243-209262 None:intergenic 5.0%
!!! AAATAAAATTTGAATTTTTT+AGG - tig0001526:210669-210688 Msa1337550:five_prime_UTR 5.0%
GAGCAGCATGTGTGCCAAAT+GGG + tig0001526:204904-204923 None:intergenic 50.0%
! CCAGAAGGTACGTAACCTTC+TGG + tig0001526:205076-205095 None:intergenic 50.0%
CCAGAAGGTTACGTACCTTC+TGG - tig0001526:205073-205092 Msa1337550:CDS 50.0%
ATGAAGCTGTGGCAGAGACA+GGG - tig0001526:205161-205180 Msa1337550:CDS 50.0%
! CAGAGAAAAGACTGGCTCCA+AGG - tig0001526:205321-205340 Msa1337550:CDS 50.0%
! GAAAAGACTGGCTCCAAGGA+AGG - tig0001526:205325-205344 Msa1337550:CDS 50.0%
CTTCACGGTACACCCAAGTT+TGG + tig0001526:205460-205479 None:intergenic 50.0%
! AATAGTGACCGGAGGGTGTA+TGG + tig0001526:205700-205719 None:intergenic 50.0%
! GTGACTTTTGGCAGCACCAA+TGG + tig0001526:205988-206007 None:intergenic 50.0%
! GGTGCTGCCAAAAGTCACAT+AGG - tig0001526:205990-206009 Msa1337550:intron 50.0%
GAAAAAAAATAGGGCGCGCG+AGG + tig0001526:206746-206765 None:intergenic 50.0%
ATCCGGACCAGGGGTAAAAT+TGG + tig0001526:206768-206787 None:intergenic 50.0%
CGGAATATGAAATCCGGACC+AGG + tig0001526:206779-206798 None:intergenic 50.0%
AGCAGTAGCTTGGCTATTGG+AGG - tig0001526:207098-207117 Msa1337550:intron 50.0%
TATTGGAGGAAAACCGGAGG+AGG - tig0001526:207112-207131 Msa1337550:intron 50.0%
CGGTTAATCTGAGGGTCATG+TGG + tig0001526:207237-207256 None:intergenic 50.0%
ACGAAGGGCGGTTAATCTGA+GGG + tig0001526:207245-207264 None:intergenic 50.0%
AACGAAGGGCGGTTAATCTG+AGG + tig0001526:207246-207265 None:intergenic 50.0%
GGGCCTCGTTGAAAACTTTC+AGG + tig0001526:207307-207326 None:intergenic 50.0%
AGAAGGAAGAAGAGGAGGAG+AGG - tig0001526:207367-207386 Msa1337550:intron 50.0%
GAAGGAAGAAGAGGAGGAGA+GGG - tig0001526:207368-207387 Msa1337550:intron 50.0%
GAGAGGGATGGTGTGAGAAA+TGG - tig0001526:207384-207403 Msa1337550:intron 50.0%
AGGGATGGTGTGAGAAATGG+TGG - tig0001526:207387-207406 Msa1337550:intron 50.0%
GGGATGGTGTGAGAAATGGT+GGG - tig0001526:207388-207407 Msa1337550:intron 50.0%
GGATGGTGTGAGAAATGGTG+GGG - tig0001526:207389-207408 Msa1337550:intron 50.0%
! GTGTGAGAAATGGTGGGGTT+TGG - tig0001526:207394-207413 Msa1337550:intron 50.0%
! GAGAAATGGTGGGGTTTGGA+AGG - tig0001526:207398-207417 Msa1337550:intron 50.0%
! GCACCACACGTTTTTGACAG+TGG + tig0001526:207503-207522 None:intergenic 50.0%
GCGGTCCGGAAAATACAATC+CGG - tig0001526:207546-207565 Msa1337550:intron 50.0%
GTGGTGAACGAGGGAAAAGT+TGG - tig0001526:207615-207634 Msa1337550:intron 50.0%
GAGAGCCATCAATGTGGGTT+TGG - tig0001526:207703-207722 Msa1337550:intron 50.0%
GCCATCAATGTGGGTTTGGA+CGG - tig0001526:207707-207726 Msa1337550:intron 50.0%
ACCGTCCAAACCCACATTGA+TGG + tig0001526:207711-207730 None:intergenic 50.0%
AAAGCGCACAACATCTGGTC+CGG - tig0001526:208158-208177 Msa1337550:intron 50.0%
CGGAAAACATAATCCGGACC+AGG - tig0001526:208215-208234 Msa1337550:intron 50.0%
! TTTTTACAGGACGCGCGAGA+AGG - tig0001526:208251-208270 Msa1337550:intron 50.0%
TACCCGGGCTCAATCCTATA+TGG - tig0001526:208310-208329 Msa1337550:intron 50.0%
ACCCGGGCTCAATCCTATAT+GGG - tig0001526:208311-208330 Msa1337550:intron 50.0%
AGCCCATATAGGATTGAGCC+CGG + tig0001526:208316-208335 None:intergenic 50.0%
! GGGCTAACTTGTATGGGTTG+CGG + tig0001526:208756-208775 None:intergenic 50.0%
TCAAAAGGAGGTGGTCCACA+TGG + tig0001526:208878-208897 None:intergenic 50.0%
CTTGACAACACCACAGCGTA+AGG - tig0001526:209907-209926 Msa1337550:intron 50.0%
TCATCGGAAACCTTACGCTG+TGG + tig0001526:209920-209939 None:intergenic 50.0%
TGCTAAGCACCCGTGTTCAT+CGG + tig0001526:209936-209955 None:intergenic 50.0%
ATGAACACGGGTGCTTAGCA+TGG - tig0001526:209936-209955 Msa1337550:intron 50.0%
ATGCAGTGAGCTCATGAGGT+GGG + tig0001526:210021-210040 None:intergenic 50.0%
AATGCAGTGAGCTCATGAGG+TGG + tig0001526:210022-210041 None:intergenic 50.0%
ACCTCATGAGCTCACTGCAT+TGG - tig0001526:210021-210040 Msa1337550:intron 50.0%
! TGCATTGGCAGAGTCCTTAG+AGG - tig0001526:210036-210055 Msa1337550:intron 50.0%
GCAGAGTCCTTAGAGGAATG+TGG - tig0001526:210043-210062 Msa1337550:intron 50.0%
TTCCTCAGGATCACCCCTAA+AGG + tig0001526:210086-210105 None:intergenic 50.0%
GTGTTGGAATGCATTGTCGG+TGG - tig0001526:210232-210251 Msa1337550:CDS 50.0%
CCCTCCTTTCTCACTTGACA+TGG + tig0001526:210395-210414 None:intergenic 50.0%
GGAGCAGCATGTGTGCCAAA+TGG + tig0001526:204905-204924 None:intergenic 55.0%
GGTTCACGTGGATTCCCAGA+AGG + tig0001526:205091-205110 None:intergenic 55.0%
GATGAAGCTGTGGCAGAGAC+AGG - tig0001526:205160-205179 Msa1337550:CDS 55.0%
!! GTTTGGTGCGGATCTAGCTG+AGG - tig0001526:205222-205241 Msa1337550:CDS 55.0%
TGGGTTCCTCTTTGGACTGC+AGG - tig0001526:205259-205278 Msa1337550:CDS 55.0%
GGGTTCCTCTTTGGACTGCA+GGG - tig0001526:205260-205279 Msa1337550:CDS 55.0%
AAAATAGGGCGCGCGAGGAA+AGG + tig0001526:206741-206760 None:intergenic 55.0%
GGCTATTGGAGGAAAACCGG+AGG - tig0001526:207109-207128 Msa1337550:intron 55.0%
GAAACAAATGCCCCTGAGGG+AGG - tig0001526:207158-207177 Msa1337550:intron 55.0%
GTTCTTAGCTTCGCCCAGCT+GGG + tig0001526:207205-207224 None:intergenic 55.0%
GAAGAAGAGGAGGAGAGGGA+TGG - tig0001526:207372-207391 Msa1337550:intron 55.0%
AGAGAGGGGCGGGTGAAAAA+TGG - tig0001526:207429-207448 Msa1337550:intron 55.0%
AGGGGCGGGTGAAAAATGGT+TGG - tig0001526:207433-207452 Msa1337550:intron 55.0%
GGGGCGGGTGAAAAATGGTT+GGG - tig0001526:207434-207453 Msa1337550:intron 55.0%
GCCCATATAGGATTGAGCCC+GGG + tig0001526:208315-208334 None:intergenic 55.0%
AGATTAAGCGGGATACCCGC+AGG - tig0001526:208729-208748 Msa1337550:intron 55.0%
GATTAAGCGGGATACCCGCA+GGG - tig0001526:208730-208749 Msa1337550:intron 55.0%
TTAAGGCCCAACCCTACCAC+CGG - tig0001526:208837-208856 Msa1337550:intron 55.0%
TCAAACCCGGTGGTAGGGTT+GGG + tig0001526:208846-208865 None:intergenic 55.0%
ATCAAACCCGGTGGTAGGGT+TGG + tig0001526:208847-208866 None:intergenic 55.0%
ACCCTACCACCGGGTTTGAT+AGG - tig0001526:208847-208866 Msa1337550:intron 55.0%
GCCTATCAAACCCGGTGGTA+GGG + tig0001526:208851-208870 None:intergenic 55.0%
TACCACCGGGTTTGATAGGC+CGG - tig0001526:208851-208870 Msa1337550:intron 55.0%
ATGGACCGGCCTATCAAACC+CGG + tig0001526:208859-208878 None:intergenic 55.0%
GTTTGATAGGCCGGTCCATG+TGG - tig0001526:208860-208879 Msa1337550:intron 55.0%
!! ATGGCAACTGCATTGGCTCG+TGG + tig0001526:209803-209822 None:intergenic 55.0%
TGCAGTGAGCTCATGAGGTG+GGG + tig0001526:210020-210039 None:intergenic 55.0%
GCCAATGCAGTGAGCTCATG+AGG + tig0001526:210025-210044 None:intergenic 55.0%
! GTCCTTTAGGGGTGATCCTG+AGG - tig0001526:210081-210100 Msa1337550:intron 55.0%
GACCGGGTTTCCAAGTTCGA+TGG + tig0001526:210644-210663 None:intergenic 55.0%
TGAGGCCCTGCAGTCCAAAG+AGG + tig0001526:205268-205287 None:intergenic 60.0%
TGGAGGAAAACCGGAGGAGG+AGG - tig0001526:207115-207134 Msa1337550:intron 60.0%
GGAGGAAAACCGGAGGAGGA+GGG - tig0001526:207116-207135 Msa1337550:intron 60.0%
CCTCATCTTCCCTCCTCCTC+CGG + tig0001526:207128-207147 None:intergenic 60.0%
CGGAGGAGGAGGGAAGATGA+GGG - tig0001526:207126-207145 Msa1337550:intron 60.0%
AGGAGGAGGGAAGATGAGGG+CGG - tig0001526:207129-207148 Msa1337550:intron 60.0%
ACAAATGCCCCTGAGGGAGG+TGG - tig0001526:207161-207180 Msa1337550:intron 60.0%
CAAATGCCCCTGAGGGAGGT+GGG - tig0001526:207162-207181 Msa1337550:intron 60.0%
AAATGCCCCTGAGGGAGGTG+GGG - tig0001526:207163-207182 Msa1337550:intron 60.0%
TGCTCAGACTTACGCCCAGC+TGG - tig0001526:207188-207207 Msa1337550:intron 60.0%
GCTCAGACTTACGCCCAGCT+GGG - tig0001526:207189-207208 Msa1337550:intron 60.0%
GGTTCTTAGCTTCGCCCAGC+TGG + tig0001526:207206-207225 None:intergenic 60.0%
GAGGGTCATGTGGGTCAGTG+TGG + tig0001526:207227-207246 None:intergenic 60.0%
TGGAACCGCGCTGCAACGAA+GGG + tig0001526:207260-207279 None:intergenic 60.0%
ATGGAACCGCGCTGCAACGA+AGG + tig0001526:207261-207280 None:intergenic 60.0%
!! TAGGGGTGTCGGTGGTGTCA+TGG - tig0001526:208085-208104 Msa1337550:intron 60.0%
! TTGTATGGGTTGCGGCCCTG+CGG + tig0001526:208748-208767 None:intergenic 60.0%
TAAGGCCCAACCCTACCACC+GGG - tig0001526:208838-208857 Msa1337550:intron 60.0%
GGCCTATCAAACCCGGTGGT+AGG + tig0001526:208852-208871 None:intergenic 60.0%
AGGAGGTGGTCCACATGGAC+CGG + tig0001526:208873-208892 None:intergenic 60.0%
GCAGTGAGCTCATGAGGTGG+GGG + tig0001526:210019-210038 None:intergenic 60.0%
! CGCGAGGAAAGGCGTAGGGT+GGG + tig0001526:206730-206749 None:intergenic 65.0%
CCGGAGGAGGAGGGAAGATG+AGG - tig0001526:207125-207144 Msa1337550:intron 65.0%
GGAGGAGGGAAGATGAGGGC+GGG - tig0001526:207130-207149 Msa1337550:intron 65.0%
AATGCCCCTGAGGGAGGTGG+GGG - tig0001526:207164-207183 Msa1337550:intron 65.0%
AACCGCCCTTCGTTGCAGCG+CGG - tig0001526:207252-207271 Msa1337550:intron 65.0%
AACCGCGCTGCAACGAAGGG+CGG + tig0001526:207257-207276 None:intergenic 65.0%
TGTGGTGCAGACCACCGACC+AGG - tig0001526:207515-207534 Msa1337550:intron 65.0%
CACCGACCAGGACACTGACG+CGG - tig0001526:207527-207546 Msa1337550:intron 65.0%
GACCGCGTCAGTGTCCTGGT+CGG + tig0001526:207532-207551 None:intergenic 65.0%
ACCAGGACACTGACGCGGTC+CGG - tig0001526:207532-207551 Msa1337550:intron 65.0%
AGGACGCGCGAGAAGGCAGT+AGG - tig0001526:208258-208277 Msa1337550:intron 65.0%
GGACGCGCGAGAAGGCAGTA+GGG - tig0001526:208259-208278 Msa1337550:intron 65.0%
GCGCGAGAAGGCAGTAGGGT+GGG - tig0001526:208263-208282 Msa1337550:intron 65.0%
! TGTATGGGTTGCGGCCCTGC+GGG + tig0001526:208747-208766 None:intergenic 65.0%
GACCGGCCTATCAAACCCGG+TGG + tig0001526:208856-208875 None:intergenic 65.0%
! GCGCGAGGAAAGGCGTAGGG+TGG + tig0001526:206731-206750 None:intergenic 70.0%
! GGCGCGCGAGGAAAGGCGTA+GGG + tig0001526:206734-206753 None:intergenic 70.0%
ATGCCCCTGAGGGAGGTGGG+GGG - tig0001526:207165-207184 Msa1337550:intron 70.0%
AGCACCCCCCACCTCCCTCA+GGG + tig0001526:207172-207191 None:intergenic 70.0%
CGCGTCAGTGTCCTGGTCGG+TGG + tig0001526:207529-207548 None:intergenic 70.0%
TCCGGACCGCGTCAGTGTCC+TGG + tig0001526:207536-207555 None:intergenic 70.0%
CGCGCGAGAAGGCAGTAGGG+TGG - tig0001526:208262-208281 Msa1337550:intron 70.0%
! GGGCGCGCGAGGAAAGGCGT+AGG + tig0001526:206735-206754 None:intergenic 75.0%
GCACCCCCCACCTCCCTCAG+GGG + tig0001526:207171-207190 None:intergenic 75.0%
GAGCACCCCCCACCTCCCTC+AGG + tig0001526:207173-207192 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0001526 gene 204718 210755 204718 ID=Msa1337550;Name=Msa1337550
tig0001526 mRNA 204718 210755 204718 ID=Msa1337550-mRNA-1;Parent=Msa1337550;Name=Msa1337550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=121|1|1|1|1|1|2|230|454
tig0001526 exon 204718 205804 204718 ID=Msa1337550-mRNA-1:exon:1228;Parent=Msa1337550-mRNA-1
tig0001526 exon 210127 210755 210127 ID=Msa1337550-mRNA-1:exon:1227;Parent=Msa1337550-mRNA-1
tig0001526 five_prime_UTR 210635 210755 210635 ID=Msa1337550-mRNA-1:five_prime_utr;Parent=Msa1337550-mRNA-1
tig0001526 CDS 210127 210634 210127 ID=Msa1337550-mRNA-1:cds;Parent=Msa1337550-mRNA-1
tig0001526 CDS 204948 205804 204948 ID=Msa1337550-mRNA-1:cds;Parent=Msa1337550-mRNA-1
tig0001526 three_prime_UTR 204718 204947 204718 ID=Msa1337550-mRNA-1:three_prime_utr;Parent=Msa1337550-mRNA-1
Gene Sequence

>Msa1337550

ATGTCTAGCTTCAAAAATGAAATGAATGGTAACAACTTGTTACATGTGGCTGTTTTGGCATTCCCATTTGGCACACATGCTGCTCCACTCCTTAGCCTAGTGAAAAGAATTGCTACAGAGTCTCCTAAAGTTACATTTTCATTCTTCTGCACAACCACAACAAATGATACTTTATTTTCTAGGTCAAATGAGTTTCTTCCTAACATAAAGCATTATAATGTTCATGATGGGTTACCAGAAGGTTACGTACCTTCTGGGAATCCACGTGAACCAATTTTTCTCTTCATTAAGACCATGCAAGAGAACTTTAAGCATGTTATTGATGAAGCTGTGGCAGAGACAGGGAAGAAAATTACTTGTTTGATTACTGATGCATTTTTTTGGTTTGGTGCGGATCTAGCTGAGGAAATGCATGCCAAATGGGTTCCTCTTTGGACTGCAGGGCCTCACTCTCTTCTTACACATGTTTACACAGATCTTATCAGAGAAAAGACTGGCTCCAAGGAAGTCCATGATGTCAAAAGTATCGATGCTCTTCCTGGTTTTCCCGAGCTAAAGGCTTCTGATTTGCCTGAGGGAGTAATAAAAGATATAGATGTACCATTTGCAACAATGTTACACAAAATGGGACTAGAGTTACCACGAGCCAATGCAGTTGCCATAAACTCATTTGCTTCAATACACCCTCTTATTGAGAATGAGTTAAATTCCAAGTTCAAATTGCTACTAAATGTTGGTCCATTCAACTTGACAACACCACAGCGTAAGGTTTCCGATGAACACGGGTGCTTAGCATGGTTGAACCAACATGAGAATTCTTCAGTGGTGTATATAAGCTTTGGAAGTGTGGTAACACCCCCACCTCATGAGCTCACTGCATTGGCAGAGTCCTTAGAGGAATGTGGATTTCCATTTATTTGGTCCTTTAGGGGTGATCCTGAGGAAAAATTGCCAAAAGGGTTTTTGGAAAGGACAAAAACAAAAGGTAAAATTGTTGCATGGGCTCCTCAAGTTGAAATCCTTAAACACTCATCAGTTGGTGTGTTTTTGACGCATTCTGGGTGGAATTCTGTGTTGGAATGCATTGTCGGTGGTGTGCCAATGATTAGTAGACCTTTTTTCGGAGATCAAGGGTTGAATACAATACTTATAGAAAGTGTTTTGGAGATTGGTGTGGGTGTTGACAATGGAGTTTTGACTAAAGAATCTACTAAGAAAGCTTTGGAATTAACCATGTCAAGTGAGAAAGGAGGGATAATGCGCCAAAAGATTGTGAAACTCAAGGAGTCAGCATTCAAAGCTGTTGAACAAAATGGTACCTCTGCAATGGATTTCACTACTTTGATACAAATTGTCACTAGTTGA
Protein sequence

>Msa1337550

MSSFKNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKRIATESPKVTFSFFCTTTTNDTLFSRSNEFLPNIKHYNVHDGLPEGYVPSGNPREPIFLFIKTMQENFKHVIDEAVAETGKKITCLITDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDALPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFASIHPLIENELNSKFKLLLNVGPFNLTTPQRKVSDEHGCLAWLNQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPEEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILIESVLEIGVGVDNGVLTKESTKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS*