AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265230 MtrunA17_Chr4g0072761 96.476 454 16 0 1 454 1 454 0.0 904
Msa1265230 MtrunA17_Chr4g0072771 76.149 457 106 1 1 454 11 467 0.0 719
Msa1265230 MtrunA17_Chr6g0454401 29.939 491 294 14 1 452 1 480 3.57e-53 186
Msa1265230 MtrunA17_Chr5g0414331 28.842 475 295 12 7 458 5 459 7.36e-53 185
Msa1265230 MtrunA17_Chr8g0377921 29.079 478 281 16 15 452 4 463 2.74e-52 183
Msa1265230 MtrunA17_Chr3g0118671 27.848 474 296 12 14 449 5 470 3.50e-52 183
Msa1265230 MtrunA17_Chr8g0366391 30.924 498 281 15 11 461 5 486 2.42e-51 181
Msa1265230 MtrunA17_Chr4g0044511 31.288 489 283 14 9 457 34 509 2.45e-51 182
Msa1265230 MtrunA17_Chr6g0464881 28.998 469 297 13 11 458 7 460 2.63e-51 181
Msa1265230 MtrunA17_Chr3g0092641 31.027 477 285 16 12 452 9 477 5.44e-51 180
Msa1265230 MtrunA17_Chr3g0118691 27.403 489 311 13 1 452 1 482 9.50e-51 179
Msa1265230 MtrunA17_Chr5g0426431 29.876 482 284 15 12 452 9 477 2.47e-50 178
Msa1265230 MtrunA17_Chr5g0423981 28.602 472 276 13 15 457 10 449 2.68e-50 177
Msa1265230 MtrunA17_Chr5g0414321 30.088 452 285 9 7 441 3 440 3.26e-50 177
Msa1265230 MtrunA17_Chr6g0453961 28.926 484 295 14 15 457 19 494 1.13e-49 177
Msa1265230 MtrunA17_Chr3g0112761 29.787 470 294 14 7 457 3 455 1.82e-49 176
Msa1265230 MtrunA17_Chr7g0232411 29.487 468 286 12 14 448 5 461 2.05e-49 176
Msa1265230 MtrunA17_Chr7g0232391 30.342 468 282 13 14 448 5 461 3.12e-49 175
Msa1265230 MtrunA17_Chr3g0118711 27.521 476 299 13 15 452 13 480 3.61e-49 175
Msa1265230 MtrunA17_Chr3g0118701 28.163 490 306 15 1 452 1 482 6.25e-49 175
Msa1265230 MtrunA17_Chr7g0250001 28.571 462 286 12 12 449 3 444 1.18e-48 173
Msa1265230 MtrunA17_Chr3g0118771 27.824 478 291 15 15 450 21 486 1.59e-48 174
Msa1265230 MtrunA17_Chr3g0112771 26.829 451 308 7 16 454 13 453 1.82e-48 173
Msa1265230 MtrunA17_Chr7g0232331 29.915 468 283 14 15 448 6 462 5.18e-48 172
Msa1265230 MtrunA17_Chr6g0454121 30.115 435 262 11 55 452 49 478 1.32e-47 171
Msa1265230 MtrunA17_Chr6g0454261 29.814 483 281 17 15 452 10 479 1.44e-47 171
Msa1265230 MtrunA17_Chr6g0454191 28.151 476 299 12 15 452 10 480 1.88e-47 171
Msa1265230 MtrunA17_Chr7g0232341 30.064 469 281 14 15 448 6 462 2.26e-47 170
Msa1265230 MtrunA17_Chr6g0454181 28.810 479 291 14 15 452 10 479 2.63e-47 170
Msa1265230 MtrunA17_Chr6g0464871 28.298 470 289 14 11 453 19 467 8.85e-47 169
Msa1265230 MtrunA17_Chr8g0373301 27.766 461 299 13 15 448 9 462 2.53e-46 167
Msa1265230 MtrunA17_Chr7g0217881 28.541 473 295 13 15 460 10 466 4.56e-46 166
Msa1265230 MtrunA17_Chr6g0454141 27.975 479 295 14 15 452 10 479 4.72e-46 167
Msa1265230 MtrunA17_Chr6g0454321 28.601 486 290 15 10 453 5 475 5.80e-46 169
Msa1265230 MtrunA17_Chr6g0464921 26.522 460 303 11 15 453 11 456 8.69e-46 166
Msa1265230 MtrunA17_Chr6g0452771 30.886 395 244 9 89 457 93 484 1.62e-45 165
Msa1265230 MtrunA17_Chr7g0232401 28.448 464 288 12 14 443 5 458 1.89e-45 165
Msa1265230 MtrunA17_Chr8g0336331 27.893 484 296 13 10 452 5 476 4.10e-45 164
Msa1265230 MtrunA17_Chr8g0334851 28.782 476 281 14 15 448 6 465 4.82e-45 164
Msa1265230 MtrunA17_Chr6g0454301 28.125 480 291 13 15 452 263 730 5.90e-45 167
Msa1265230 MtrunA17_Chr6g0454301 34.802 227 132 4 239 450 2 227 8.27e-32 129
Msa1265230 MtrunA17_Chr8g0359821 28.542 480 289 12 15 452 10 477 7.72e-45 164
Msa1265230 MtrunA17_Chr6g0462531 30.769 468 280 19 18 451 6 463 9.01e-45 163
Msa1265230 MtrunA17_Chr6g0454131 30.023 443 260 12 58 459 52 485 9.52e-45 163
Msa1265230 MtrunA17_Chr8g0334861 28.025 471 287 16 15 449 6 460 1.08e-44 163
Msa1265230 MtrunA17_Chr6g0453951 27.629 485 299 14 15 457 57 531 1.36e-44 164
Msa1265230 MtrunA17_Chr6g0454361 28.163 490 290 15 15 457 11 485 1.37e-44 163
Msa1265230 MtrunA17_Chr8g0339461 28.661 478 277 17 15 446 6 465 1.67e-44 162
Msa1265230 MtrunA17_Chr6g0454151 28.671 429 258 11 73 457 58 482 2.04e-44 162
Msa1265230 MtrunA17_Chr6g0462551 34.154 325 188 9 145 448 141 460 2.54e-44 162
Msa1265230 MtrunA17_Chr6g0454331 29.375 480 289 16 15 452 7 478 3.74e-44 162
Msa1265230 MtrunA17_Chr4g0053501 26.293 464 302 10 14 449 10 461 3.93e-44 162
Msa1265230 MtrunA17_Chr2g0278711 27.447 470 305 11 15 452 11 476 5.51e-44 161
Msa1265230 MtrunA17_Chr6g0462571 37.931 290 154 9 179 448 174 457 6.86e-44 161
Msa1265230 MtrunA17_Chr8g0380531 27.373 453 289 13 14 441 9 446 1.08e-43 160
Msa1265230 MtrunA17_Chr8g0336731 33.239 355 206 11 121 449 138 487 1.26e-43 160
Msa1265230 MtrunA17_Chr1g0207981 29.692 357 222 9 115 449 120 469 1.49e-43 160
Msa1265230 MtrunA17_Chr6g0464841 28.200 461 281 15 9 441 5 443 1.74e-43 159
Msa1265230 MtrunA17_Chr3g0098111 26.819 481 297 13 14 455 8 472 1.77e-43 160
Msa1265230 MtrunA17_Chr7g0249931 27.948 458 276 17 14 441 39 472 2.19e-43 159
Msa1265230 MtrunA17_Chr6g0464861 28.603 458 278 13 11 441 7 442 2.53e-43 159
Msa1265230 MtrunA17_Chr8g0336741 31.214 346 207 9 121 440 119 459 3.30e-43 159
Msa1265230 MtrunA17_Chr8g0339451 33.978 362 198 13 114 441 98 452 4.34e-43 158
Msa1265230 MtrunA17_Chr6g0454341 27.158 475 302 14 15 452 10 477 6.89e-43 158
Msa1265230 MtrunA17_Chr5g0393591 26.415 477 296 12 1 458 1 441 1.02e-42 157
Msa1265230 MtrunA17_Chr1g0207971 28.035 453 284 11 14 441 7 442 1.97e-42 156
Msa1265230 MtrunA17_Chr7g0265151 28.717 491 291 18 14 456 8 487 3.17e-42 156
Msa1265230 MtrunA17_Chr6g0449931 34.185 313 176 8 163 448 154 463 3.72e-42 156
Msa1265230 MtrunA17_Chr8g0339601 36.275 306 159 9 167 440 17 318 3.82e-42 152
Msa1265230 MtrunA17_Chr4g0044501 29.592 490 293 15 12 461 7 484 4.28e-42 156
Msa1265230 MtrunA17_Chr6g0454221 38.496 226 131 3 259 480 34 255 6.09e-42 151
Msa1265230 MtrunA17_Chr3g0078841 26.964 471 304 12 15 450 10 475 6.33e-42 155
Msa1265230 MtrunA17_Chr8g0339631 32.153 367 205 13 114 446 106 462 6.51e-42 155
Msa1265230 MtrunA17_Chr6g0454211 28.329 413 254 9 78 452 358 766 1.08e-41 158
Msa1265230 MtrunA17_Chr6g0454211 31.556 225 106 10 163 371 46 238 1.38e-18 89.0
Msa1265230 MtrunA17_Chr3g0118661 27.893 484 282 16 15 450 13 477 2.34e-41 154
Msa1265230 MtrunA17_Chr6g0462541 30.387 362 229 7 105 448 103 459 3.11e-41 154
Msa1265230 MtrunA17_Chr7g0275681 30.162 494 282 20 9 455 6 483 4.86e-41 153
Msa1265230 MtrunA17_Chr8g0361371 27.061 473 293 11 16 449 8 467 5.59e-41 153
Msa1265230 MtrunA17_Chr6g0454201 28.243 478 295 14 15 452 11 480 6.25e-41 153
Msa1265230 MtrunA17_Chr8g0336691 28.692 474 283 16 14 448 918 1375 1.22e-40 156
Msa1265230 MtrunA17_Chr8g0336691 28.400 500 302 18 14 482 479 953 2.96e-40 155
Msa1265230 MtrunA17_Chr8g0336691 27.789 511 319 14 14 482 12 514 2.87e-39 152
Msa1265230 MtrunA17_Chr5g0426401 33.333 300 173 7 175 452 16 310 1.54e-40 148
Msa1265230 MtrunA17_Chr8g0377941 28.000 450 291 12 15 439 7 448 1.73e-40 151
Msa1265230 MtrunA17_Chr3g0118721 33.463 257 150 4 215 452 35 289 1.88e-40 147
Msa1265230 MtrunA17_Chr6g0459311 34.247 292 169 7 179 448 177 467 2.62e-40 151
Msa1265230 MtrunA17_Chr1g0207951 25.786 477 318 12 5 455 645 1111 3.90e-40 154
Msa1265230 MtrunA17_Chr1g0207951 27.176 471 303 11 5 450 113 568 3.79e-38 149
Msa1265230 MtrunA17_Chr6g0454291 28.780 410 256 9 78 452 68 476 4.27e-40 150
Msa1265230 MtrunA17_Chr7g0249981 26.237 465 300 13 12 454 22 465 5.08e-40 150
Msa1265230 MtrunA17_Chr8g0336651 29.194 459 288 15 14 441 780 1232 6.31e-40 154
Msa1265230 MtrunA17_Chr8g0336651 30.618 356 212 10 121 448 112 460 1.09e-36 144
Msa1265230 MtrunA17_Chr8g0336651 30.070 286 166 8 216 482 545 815 2.80e-30 125
Msa1265230 MtrunA17_Chr6g0462521 30.541 370 222 11 102 451 95 449 9.48e-40 149
Msa1265230 MtrunA17_Chr4g0032331 28.764 445 279 14 22 444 15 443 1.09e-39 149
Msa1265230 MtrunA17_Chr1g0207861 25.786 477 307 12 15 456 8 472 1.21e-39 149
Msa1265230 MtrunA17_Chr4g0050341 26.250 480 298 14 15 449 19 487 1.36e-39 149
Msa1265230 MtrunA17_Chr1g0153451 27.015 459 307 10 14 448 5 459 1.37e-39 149
Msa1265230 MtrunA17_Chr4g0053321 26.452 465 300 12 14 449 25 476 1.54e-39 149
Msa1265230 MtrunA17_Chr5g0419771 27.846 492 298 16 8 450 27 510 1.70e-39 149
Msa1265230 MtrunA17_Chr7g0218821 26.638 458 298 14 15 449 5 447 1.94e-39 148
Msa1265230 MtrunA17_Chr8g0347281 26.681 461 299 11 16 448 19 468 2.03e-39 149
Msa1265230 MtrunA17_Chr7g0265041 33.422 377 203 13 119 456 125 492 2.65e-39 149
Msa1265230 MtrunA17_Chr4g0014061 28.685 502 280 15 14 463 8 483 2.90e-39 148
Msa1265230 MtrunA17_Chr1g0179901 28.041 485 293 14 14 450 15 491 3.70e-39 148
Msa1265230 MtrunA17_Chr7g0243781 27.789 493 295 15 14 459 8 486 5.35e-39 147
Msa1265230 MtrunA17_Chr1g0207931 26.371 474 257 11 7 450 84 495 6.54e-39 147
Msa1265230 MtrunA17_Chr6g0454351 27.859 481 301 15 9 460 6 469 7.87e-39 147
Msa1265230 MtrunA17_Chr3g0079731 28.715 397 236 11 93 450 90 478 1.14e-38 147
Msa1265230 MtrunA17_Chr6g0486251 36.759 253 138 6 217 448 209 460 1.18e-38 146
Msa1265230 MtrunA17_Chr6g0486201 36.759 253 138 6 217 448 209 460 1.18e-38 146
Msa1265230 MtrunA17_Chr3g0121991 26.971 482 287 15 15 449 79 542 1.36e-38 147
Msa1265230 MtrunA17_Chr5g0440421 28.155 515 264 21 15 451 10 496 3.87e-38 145
Msa1265230 MtrunA17_Chr7g0218791 26.134 463 283 15 15 445 5 440 5.07e-38 144
Msa1265230 MtrunA17_Chr8g0365811 27.461 386 245 8 108 465 109 487 1.05e-37 147
Msa1265230 MtrunA17_Chr8g0365811 25.455 495 297 17 14 460 494 964 6.18e-36 142
Msa1265230 MtrunA17_Chr8g0335141 33.922 283 158 7 195 448 182 464 2.01e-37 143
Msa1265230 MtrunA17_Chr8g0339441 38.136 236 122 4 230 441 183 418 3.29e-37 142
Msa1265230 MtrunA17_Chr1g0159551 35.808 229 127 5 245 453 232 460 3.61e-37 142
Msa1265230 MtrunA17_Chr8g0334831 26.789 489 283 13 16 449 7 475 4.99e-37 142
Msa1265230 MtrunA17_Chr8g0355221 26.367 512 305 16 1 459 1 493 5.08e-37 142
Msa1265230 MtrunA17_Chr7g0218811 26.931 479 282 17 2 449 5 446 5.32e-37 141
Msa1265230 MtrunA17_Chr1g0161351 27.386 482 283 15 14 450 36 495 7.91e-37 142
Msa1265230 MtrunA17_Chr7g0265141 30.383 418 242 14 74 450 74 483 9.40e-37 141
Msa1265230 MtrunA17_Chr7g0243631 27.579 504 289 20 11 459 9 491 9.68e-37 141
Msa1265230 MtrunA17_Chr1g0173121 35.965 228 127 5 245 453 236 463 1.52e-36 140
Msa1265230 MtrunA17_Chr7g0265051 35.793 271 142 10 218 456 218 488 1.55e-36 141
Msa1265230 MtrunA17_Chr5g0442491 26.633 398 249 10 95 455 86 477 1.60e-36 140
Msa1265230 MtrunA17_Chr5g0412111 26.539 471 307 15 15 456 5 465 1.72e-36 140
Msa1265230 MtrunA17_Chr5g0412131 26.403 481 302 16 12 456 9 473 1.86e-36 140
Msa1265230 MtrunA17_Chr1g0153461 35.437 206 113 3 263 448 3 208 2.30e-36 134
Msa1265230 MtrunA17_Chr4g0066171 28.274 481 273 18 14 449 20 473 3.23e-36 140
Msa1265230 MtrunA17_Chr5g0442561 27.470 415 258 13 78 455 67 475 3.60e-36 139
Msa1265230 MtrunA17_Chr8g0335161 32.384 281 169 5 189 448 182 462 4.18e-36 139
Msa1265230 MtrunA17_Chr3g0122001 26.434 488 288 14 15 452 486 952 5.57e-36 142
Msa1265230 MtrunA17_Chr3g0122001 26.132 486 293 14 15 452 6 473 1.02e-33 135
Msa1265230 MtrunA17_Chr8g0347271 26.966 356 237 5 114 448 116 469 8.72e-36 138
Msa1265230 MtrunA17_Chr5g0412101 25.941 478 303 16 15 456 12 474 9.26e-36 138
Msa1265230 MtrunA17_Chr7g0232311 35.047 214 118 3 259 451 249 462 1.51e-35 137
Msa1265230 MtrunA17_Chr8g0382021 33.740 246 139 5 230 453 246 489 1.57e-35 138
Msa1265230 MtrunA17_Chr7g0265101 33.088 272 149 8 218 456 219 490 1.57e-35 138
Msa1265230 MtrunA17_Chr4g0066151 27.699 491 266 22 26 458 29 488 1.96e-35 137
Msa1265230 MtrunA17_Chr7g0243931 26.733 505 296 19 9 459 11 495 3.05e-35 137
Msa1265230 MtrunA17_Chr3g0118751 25.949 474 276 17 15 450 6 442 3.28e-35 136
Msa1265230 MtrunA17_Chr7g0243681 28.657 499 285 22 11 459 7 484 5.35e-35 136
Msa1265230 MtrunA17_Chr5g0403641 34.182 275 140 8 206 441 219 491 5.40e-35 137
Msa1265230 MtrunA17_Chr4g0011051 28.979 421 239 16 77 450 78 485 7.04e-35 136
Msa1265230 MtrunA17_Chr5g0442601 25.180 417 267 11 78 455 468 878 1.04e-34 138
Msa1265230 MtrunA17_Chr5g0442601 26.426 333 198 9 83 392 25 333 4.79e-23 103
Msa1265230 MtrunA17_Chr7g0275511 26.458 480 298 14 16 456 16 479 1.04e-34 135
Msa1265230 MtrunA17_Chr4g0044521 36.604 265 137 7 221 454 204 468 1.53e-34 135
Msa1265230 MtrunA17_Chr1g0207831 27.419 372 229 8 112 456 110 467 1.96e-34 134
Msa1265230 MtrunA17_Chr6g0454271 32.016 253 156 4 215 452 35 286 2.53e-34 130
Msa1265230 MtrunA17_Chr7g0243801 26.367 512 298 18 14 471 6 492 2.87e-34 134
Msa1265230 MtrunA17_Chr6g0454171 33.212 274 144 8 206 460 61 314 2.95e-34 130
Msa1265230 MtrunA17_Chr5g0442521 23.701 481 318 14 16 455 6 478 4.47e-34 134
Msa1265230 MtrunA17_Chr5g0442581 24.536 485 306 13 15 452 5 476 9.52e-34 133
Msa1265230 MtrunA17_Chr4g0066221 27.386 482 280 19 19 449 15 477 1.09e-33 132
Msa1265230 MtrunA17_Chr8g0361411 26.739 460 297 12 15 450 8 451 1.10e-33 132
Msa1265230 MtrunA17_Chr6g0463861 27.801 482 280 19 26 462 22 480 1.18e-33 132
Msa1265230 MtrunA17_Chr4g0066131 26.722 479 265 18 26 449 24 471 1.38e-33 132
Msa1265230 MtrunA17_Chr7g0243861 27.146 501 297 20 11 460 10 493 1.46e-33 132
Msa1265230 MtrunA17_Chr7g0218841 25.828 453 301 15 13 449 4 437 1.70e-33 131
Msa1265230 MtrunA17_Chr7g0249961 32.099 243 143 5 230 454 20 258 2.11e-33 127
Msa1265230 MtrunA17_Chr2g0329111 28.647 377 230 12 98 442 97 466 2.24e-33 132
Msa1265230 MtrunA17_Chr8g0374931 31.806 371 201 14 120 449 119 478 2.97e-33 131
Msa1265230 MtrunA17_Chr4g0066261 28.482 481 263 20 26 449 22 478 4.56e-33 131
Msa1265230 MtrunA17_Chr7g0243951 25.896 502 299 19 11 459 7 488 4.83e-33 131
Msa1265230 MtrunA17_Chr1g0165701 26.367 512 306 17 1 461 1 492 7.69e-33 130
Msa1265230 MtrunA17_Chr4g0066201 31.608 367 200 14 120 450 121 472 1.41e-32 129
Msa1265230 MtrunA17_Chr5g0420801 26.371 474 313 15 11 459 3 465 2.05e-32 129
Msa1265230 MtrunA17_Chr5g0448521 27.644 416 248 17 78 452 64 467 2.33e-32 129
Msa1265230 MtrunA17_Chr7g0218831 26.432 454 296 17 13 449 4 436 2.86e-32 128
Msa1265230 MtrunA17_Chr5g0419761 26.854 499 301 19 14 460 8 494 3.16e-32 129
Msa1265230 MtrunA17_Chr5g0442541 25.485 412 257 13 78 452 67 465 3.55e-32 128
Msa1265230 MtrunA17_Chr6g0463891 25.852 499 301 18 14 460 11 492 4.35e-32 128
Msa1265230 MtrunA17_Chr7g0218311 38.356 219 110 5 257 450 263 481 5.01e-32 128
Msa1265230 MtrunA17_Chr7g0243871 33.858 254 142 8 222 452 219 469 5.81e-32 128
Msa1265230 MtrunA17_Chr6g0463851 33.218 289 150 9 202 450 195 480 9.58e-32 127
Msa1265230 MtrunA17_Chr7g0243771 34.454 238 133 6 254 471 257 491 1.18e-31 127
Msa1265230 MtrunA17_Chr5g0401851 26.078 510 275 18 19 459 14 490 1.77e-31 126
Msa1265230 MtrunA17_Chr7g0243711 36.652 221 116 7 260 459 104 321 2.29e-31 123
Msa1265230 MtrunA17_Chr8g0374941 36.744 215 110 6 261 449 1200 1414 3.86e-31 128
Msa1265230 MtrunA17_Chr8g0374941 35.961 203 104 6 261 437 262 464 1.52e-28 120
Msa1265230 MtrunA17_Chr8g0374941 35.859 198 101 5 263 434 729 926 1.04e-24 108
Msa1265230 MtrunA17_Chr8g0374901 36.073 219 108 6 261 450 261 476 4.09e-31 125
Msa1265230 MtrunA17_Chr4g0044481 28.571 406 227 12 18 394 28 399 5.28e-31 124
Msa1265230 MtrunA17_Chr4g0066281 27.386 482 265 19 19 449 16 463 1.47e-30 124
Msa1265230 MtrunA17_Chr5g0410941 28.400 500 280 20 6 450 11 487 1.99e-30 123
Msa1265230 MtrunA17_Chr2g0294941 31.339 351 190 15 120 432 17 354 2.24e-30 121
Msa1265230 MtrunA17_Chr3g0079711 35.870 184 95 3 290 450 3 186 3.30e-30 116
Msa1265230 MtrunA17_Chr8g0374971 35.185 216 114 5 261 450 263 478 3.60e-30 122
Msa1265230 MtrunA17_Chr5g0401721 26.667 360 237 10 116 452 115 470 3.78e-30 122
Msa1265230 MtrunA17_Chr7g0232351 30.311 386 227 13 14 369 5 378 4.96e-30 120
Msa1265230 MtrunA17_Chr7g0235051 35.714 210 115 5 260 449 241 450 5.17e-30 122
Msa1265230 MtrunA17_Chr4g0060511 34.802 227 124 7 254 459 269 492 9.82e-30 121
Msa1265230 MtrunA17_Chr5g0429711 29.811 265 163 8 207 453 203 462 1.26e-29 120
Msa1265230 MtrunA17_Chr7g0243851 33.692 279 148 9 215 459 172 447 1.85e-29 120
Msa1265230 MtrunA17_Chr2g0294921 29.600 375 206 15 120 450 268 628 2.00e-29 122
Msa1265230 MtrunA17_Chr8g0370941 25.703 498 303 16 15 457 8 493 2.03e-29 120
Msa1265230 MtrunA17_Chr8g0367221 36.872 179 103 4 261 429 1543 1721 3.05e-29 122
Msa1265230 MtrunA17_Chr8g0367221 37.143 175 98 5 266 429 1058 1231 2.79e-27 116
Msa1265230 MtrunA17_Chr8g0367221 36.782 174 100 5 266 429 271 444 1.61e-26 114
Msa1265230 MtrunA17_Chr7g0265111 25.743 505 290 17 12 454 36 517 3.60e-29 120
Msa1265230 MtrunA17_Chr5g0429681 29.333 300 179 10 178 452 208 499 3.87e-29 120
Msa1265230 MtrunA17_Chr5g0416741 24.303 502 316 16 6 459 5 490 4.52e-29 119
Msa1265230 MtrunA17_Chr2g0307961 36.508 189 114 3 266 450 280 466 4.77e-29 119
Msa1265230 MtrunA17_Chr8g0355011 29.191 346 198 9 118 449 46 358 5.81e-29 117
Msa1265230 MtrunA17_Chr6g0454251 25.000 392 253 11 15 369 7 394 1.44e-28 117
Msa1265230 MtrunA17_Chr5g0448551 34.866 261 142 11 149 395 148 394 1.46e-28 117
Msa1265230 MtrunA17_Chr8g0350881 35.814 215 112 5 261 449 263 477 1.77e-28 117
Msa1265230 MtrunA17_Chr7g0243911 36.649 191 101 5 266 436 24 214 1.92e-28 112
Msa1265230 MtrunA17_Chr7g0241801 33.617 235 135 7 230 454 207 430 2.15e-28 117
Msa1265230 MtrunA17_Chr5g0442511 28.676 272 160 5 213 452 224 493 2.45e-28 117
Msa1265230 MtrunA17_Chr5g0428081 37.759 241 116 9 244 450 237 477 3.13e-28 117
Msa1265230 MtrunA17_Chr2g0294931 28.313 498 287 21 14 459 10 489 4.05e-28 117
Msa1265230 MtrunA17_Chr2g0302991 27.757 263 159 7 218 453 205 463 8.17e-28 115
Msa1265230 MtrunA17_Chr6g0454371 37.870 169 100 2 288 452 3 170 1.23e-27 108
Msa1265230 MtrunA17_Chr5g0431441 22.976 457 302 14 15 441 18 454 1.55e-27 115
Msa1265230 MtrunA17_Chr5g0409591 30.909 275 135 7 212 433 206 478 1.91e-27 115
Msa1265230 MtrunA17_Chr2g0279741 47.706 109 53 1 235 339 1 109 4.31e-27 106
Msa1265230 MtrunA17_Chr7g0241781 37.423 163 96 3 264 423 241 400 5.34e-27 112
Msa1265230 MtrunA17_Chr8g0369341 26.240 484 311 18 11 459 3 475 1.16e-26 112
Msa1265230 MtrunA17_Chr5g0416821 26.562 384 228 11 118 466 123 487 1.48e-26 112
Msa1265230 MtrunA17_Chr4g0069611 38.415 164 95 3 265 422 268 431 1.91e-26 111
Msa1265230 MtrunA17_Chr2g0302961 27.969 261 161 7 218 453 208 466 2.53e-26 111
Msa1265230 MtrunA17_Chr7g0243611 42.958 142 74 3 260 394 132 273 2.90e-26 108
Msa1265230 MtrunA17_Chr5g0431401 21.915 470 320 12 9 454 4 450 3.70e-26 110
Msa1265230 MtrunA17_Chr5g0431361 22.103 466 327 12 9 454 6 455 2.42e-25 108
Msa1265230 MtrunA17_Chr3g0092031 36.810 163 97 3 265 421 5 167 2.60e-25 103
Msa1265230 MtrunA17_Chr7g0243761 41.304 138 74 2 264 394 275 412 2.81e-25 108
Msa1265230 MtrunA17_Chr3g0106231 23.026 456 307 14 15 450 18 449 4.70e-25 107
Msa1265230 MtrunA17_Chr5g0431421 23.605 466 317 16 9 454 4 450 9.13e-25 106
Msa1265230 MtrunA17_Chr2g0302851 37.805 164 96 3 265 422 269 432 9.16e-25 106
Msa1265230 MtrunA17_Chr2g0278721 37.696 191 106 4 245 422 757 947 1.99e-24 107
Msa1265230 MtrunA17_Chr2g0278721 35.503 169 103 4 265 427 273 441 3.54e-22 100
Msa1265230 MtrunA17_Chr4g0039881 34.010 197 123 4 265 455 245 440 2.32e-24 105
Msa1265230 MtrunA17_Chr1g0196851 33.953 215 124 6 240 438 273 485 3.68e-24 105
Msa1265230 MtrunA17_Chr6g0454231 30.315 254 136 5 216 460 5 226 4.15e-24 105
Msa1265230 MtrunA17_Chr4g0042891 29.003 331 192 13 151 450 145 463 5.25e-24 104
Msa1265230 MtrunA17_Chr6g0466831 29.455 275 150 8 191 421 159 433 1.31e-23 103
Msa1265230 MtrunA17_Chr6g0466841 29.455 275 150 8 191 421 159 433 2.47e-23 102
Msa1265230 MtrunA17_Chr5g0431371 21.895 475 314 15 9 454 4 450 6.11e-23 101
Msa1265230 MtrunA17_Chr2g0278741 29.963 267 145 6 200 427 260 523 7.16e-23 101
Msa1265230 MtrunA17_Chr7g0243811 35.263 190 112 3 222 400 194 383 1.93e-22 99.0
Msa1265230 MtrunA17_Chr4g0029131 32.618 233 126 6 266 482 257 474 3.28e-22 100
Msa1265230 MtrunA17_Chr4g0042931 28.417 278 164 9 202 450 190 461 4.17e-22 99.0
Msa1265230 MtrunA17_Chr4g0040691 35.429 175 102 4 266 429 261 435 6.09e-22 98.2
Msa1265230 MtrunA17_Chr2g0283041 24.201 438 274 14 12 415 4 417 1.41e-21 97.4
Msa1265230 MtrunA17_Chr8g0337381 38.017 121 70 2 331 448 3 121 2.52e-21 89.7
Msa1265230 MtrunA17_Chr8g0336261 37.879 132 77 2 288 415 3 133 3.46e-21 89.7
Msa1265230 MtrunA17_Chr1g0207881 34.307 137 85 1 324 455 251 387 4.53e-21 95.1
Msa1265230 MtrunA17_Chr8g0336251 32.243 214 124 6 231 423 223 436 4.87e-21 95.9
Msa1265230 MtrunA17_Chr8g0336321 32.243 214 124 6 231 423 223 436 5.15e-21 95.5
Msa1265230 MtrunA17_Chr4g0029151 33.862 189 109 4 266 438 265 453 1.66e-20 94.0
Msa1265230 MtrunA17_Chr4g0040711 34.286 175 104 4 266 429 261 435 1.78e-20 94.0
Msa1265230 MtrunA17_Chr6g0464091 32.461 191 122 5 266 450 279 468 2.53e-20 93.6
Msa1265230 MtrunA17_Chr2g0319751 26.291 426 265 17 8 415 1 395 3.04e-20 94.4
Msa1265230 MtrunA17_Chr2g0319751 32.599 227 137 7 216 428 687 911 5.69e-18 87.4
Msa1265230 MtrunA17_Chr2g0319791 25.926 432 283 17 8 415 1 419 3.86e-20 92.8
Msa1265230 MtrunA17_Chr5g0427571 30.973 226 128 7 231 431 53 275 5.11e-20 90.5
Msa1265230 MtrunA17_Chr3g0106251 26.295 251 163 8 215 450 48 291 5.98e-20 90.5
Msa1265230 MtrunA17_Chr2g0319761 25.917 436 266 16 14 415 7 419 8.77e-20 91.7
Msa1265230 MtrunA17_Chr4g0066141 36.478 159 85 4 312 454 195 353 1.10e-19 90.5
Msa1265230 MtrunA17_Chr6g0482061 25.641 312 197 9 157 440 163 467 1.11e-19 91.7
Msa1265230 MtrunA17_Chr7g0231631 29.478 268 145 8 222 459 13 266 2.44e-19 87.8
Msa1265230 MtrunA17_Chr7g0250021 25.220 341 220 12 5 326 2 326 2.10e-18 86.3
Msa1265230 MtrunA17_Chr8g0357361 30.653 199 124 5 211 396 56 253 5.19e-18 84.0
Msa1265230 MtrunA17_Chr2g0319731 25.814 430 286 15 8 415 18 436 8.64e-18 85.9
Msa1265230 MtrunA17_Chr5g0432731 26.016 246 162 8 224 452 54 296 1.89e-17 82.8
Msa1265230 MtrunA17_Chr5g0431431 26.360 239 153 8 174 402 111 336 4.09e-17 82.8
Msa1265230 MtrunA17_Chr2g0319801 25.977 435 279 17 8 415 1 419 2.59e-15 78.2
Msa1265230 MtrunA17_Chr2g0321331 30.667 150 85 3 272 415 92 228 9.25e-13 68.6
Msa1265230 MtrunA17_Chr6g0453981 29.375 160 86 5 172 312 55 206 2.01e-12 67.0
Msa1265230 MtrunA17_Chr7g0243731 44.444 72 39 1 324 394 2 73 8.78e-12 60.8
Msa1265230 MtrunA17_Chr6g0454391 35.714 98 58 2 346 443 13 105 5.42e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265230 AT5G17050.1 50.783 447 213 4 15 454 12 458 3.25e-160 462
Msa1265230 AT5G17030.1 44.843 446 236 6 15 452 12 455 3.85e-134 395
Msa1265230 AT1G30530.1 45.227 440 234 5 15 450 12 448 1.09e-132 392
Msa1265230 AT5G17040.1 44.595 444 231 7 15 452 5 439 3.43e-131 387
Msa1265230 AT5G17040.2 44.805 308 165 3 150 452 30 337 1.03e-87 272
Msa1265230 AT5G59580.1 28.097 452 299 10 15 454 9 446 1.23e-52 184
Msa1265230 AT1G22400.1 28.033 478 289 13 15 449 13 478 4.66e-52 184
Msa1265230 AT3G46680.1 29.139 453 291 12 15 452 9 446 6.91e-52 182
Msa1265230 AT5G59590.1 27.130 446 305 9 15 449 10 446 4.50e-51 180
Msa1265230 AT3G46700.1 28.667 450 291 13 15 450 9 442 7.53e-51 179
Msa1265230 AT1G22360.1 28.000 475 298 12 15 452 10 477 2.66e-49 176
Msa1265230 AT3G46660.1 27.640 445 288 9 16 441 15 444 4.72e-49 175
Msa1265230 AT1G22380.1 28.870 478 290 14 15 452 13 480 1.13e-48 174
Msa1265230 AT5G05880.1 27.646 463 306 10 8 454 1 450 3.34e-48 172
Msa1265230 AT2G31790.1 26.180 466 301 13 15 453 8 457 2.36e-47 170
Msa1265230 AT3G46670.1 27.854 438 296 9 15 441 9 437 9.09e-47 168
Msa1265230 AT1G22360.2 27.579 475 288 12 15 452 10 465 2.40e-46 167
Msa1265230 AT3G11340.1 31.034 348 223 7 119 454 104 446 2.70e-46 167
Msa1265230 AT2G36770.1 30.346 491 281 20 14 455 13 491 8.72e-46 167
Msa1265230 AT1G05675.1 27.564 468 286 13 15 451 6 451 9.75e-46 166
Msa1265230 AT2G43820.1 27.802 464 291 16 15 455 7 449 1.05e-45 166
Msa1265230 AT3G16520.3 30.508 354 218 10 117 450 112 457 1.43e-45 166
Msa1265230 AT2G15480.1 30.550 491 290 16 8 455 1 483 4.83e-45 164
Msa1265230 AT3G46650.1 27.126 435 284 8 15 440 10 420 1.75e-44 162
Msa1265230 AT3G46720.1 27.578 446 297 10 15 450 9 438 2.12e-44 162
Msa1265230 AT1G05680.1 27.434 452 287 12 15 441 6 441 2.28e-44 162
Msa1265230 AT3G46690.1 27.477 444 295 10 26 454 20 451 3.61e-44 161
Msa1265230 AT1G78270.1 29.436 479 286 18 15 452 13 480 4.61e-44 162
Msa1265230 AT2G31750.2 26.866 469 305 15 15 460 8 461 5.51e-44 162
Msa1265230 AT2G15490.3 30.247 486 290 14 12 455 2 480 9.90e-44 161
Msa1265230 AT2G31750.1 27.333 450 290 14 15 441 8 443 1.02e-43 160
Msa1265230 AT3G55700.1 30.688 378 241 11 92 454 81 452 1.07e-43 160
Msa1265230 AT2G15480.2 30.140 501 289 16 8 455 1 493 2.00e-43 160
Msa1265230 AT5G05870.1 27.623 467 305 12 8 453 1 455 3.65e-43 159
Msa1265230 AT2G15490.1 30.061 489 290 14 12 455 2 483 5.00e-43 159
Msa1265230 AT4G01070.1 29.474 475 275 16 8 441 1 456 5.38e-43 159
Msa1265230 AT4G34131.1 29.388 490 280 17 14 454 9 481 7.12e-43 159
Msa1265230 AT1G01420.2 29.032 465 293 14 6 441 2 458 7.87e-43 158
Msa1265230 AT1G01420.1 29.158 463 291 14 8 441 1 455 1.03e-42 158
Msa1265230 AT5G05860.1 27.790 457 293 12 11 448 5 443 1.85e-42 157
Msa1265230 AT2G36780.1 30.204 490 290 18 14 458 13 495 2.17e-42 157
Msa1265230 AT2G36970.1 25.732 478 320 13 15 463 10 481 2.91e-42 157
Msa1265230 AT2G23260.1 26.180 466 296 14 15 453 10 454 5.45e-42 155
Msa1265230 AT3G16520.1 29.480 346 216 10 117 442 112 449 5.81e-42 155
Msa1265230 AT1G22370.2 27.941 476 292 16 15 452 13 475 6.53e-42 156
Msa1265230 AT3G16520.2 30.149 335 206 10 117 431 112 438 8.20e-42 155
Msa1265230 AT2G43840.1 27.234 470 281 16 15 451 7 448 8.57e-42 155
Msa1265230 AT3G53160.1 27.800 500 304 17 8 460 1 490 9.84e-42 155
Msa1265230 AT2G23250.1 26.786 448 296 10 18 449 1 432 1.95e-41 154
Msa1265230 AT1G22340.1 27.292 480 296 15 15 452 13 481 3.04e-41 154
Msa1265230 AT2G43840.2 27.021 470 282 16 15 451 7 448 8.50e-41 152
Msa1265230 AT5G05890.1 27.061 473 300 15 8 454 1 454 6.14e-40 150
Msa1265230 AT5G05900.1 26.981 467 301 12 8 453 1 448 1.03e-39 149
Msa1265230 AT5G26310.1 28.322 459 282 13 15 439 7 452 1.27e-39 149
Msa1265230 AT5G66690.1 28.821 458 281 14 15 439 7 452 3.83e-39 148
Msa1265230 AT2G26480.1 25.821 457 301 12 15 452 8 445 7.26e-39 147
Msa1265230 AT1G01390.1 28.211 475 289 11 8 445 1 460 3.25e-38 145
Msa1265230 AT5G38040.1 25.114 438 304 9 26 450 21 447 3.33e-38 145
Msa1265230 AT3G50740.1 30.573 471 269 17 15 442 7 462 3.60e-38 145
Msa1265230 AT1G01390.2 28.211 475 289 11 8 445 18 477 4.11e-38 145
Msa1265230 AT2G36800.1 28.200 500 291 19 6 452 3 487 4.45e-38 145
Msa1265230 AT2G28080.1 28.665 457 275 15 19 442 22 460 5.23e-38 145
Msa1265230 AT1G07240.1 30.000 320 186 11 163 457 174 480 1.28e-37 144
Msa1265230 AT4G15550.1 26.754 456 299 15 15 441 13 462 2.03e-37 143
Msa1265230 AT2G36760.1 27.216 485 304 14 14 455 13 491 2.04e-37 144
Msa1265230 AT2G36790.1 26.939 490 289 15 14 450 12 485 5.30e-37 142
Msa1265230 AT4G15490.1 25.840 476 318 12 8 455 1 469 6.12e-37 142
Msa1265230 AT2G36750.1 36.466 266 138 9 218 452 218 483 2.25e-36 140
Msa1265230 AT4G34135.1 28.008 482 298 13 14 454 10 483 2.97e-36 140
Msa1265230 AT4G15480.1 27.966 472 296 13 12 450 16 476 3.43e-36 140
Msa1265230 AT3G55710.1 27.155 464 313 11 8 454 1 456 3.91e-36 139
Msa1265230 AT5G38010.1 25.380 461 300 12 15 450 10 451 4.24e-35 136
Msa1265230 AT3G21560.1 25.440 511 297 16 15 478 12 485 6.54e-35 137
Msa1265230 AT4G34138.1 33.459 266 150 8 218 459 223 485 7.63e-35 136
Msa1265230 AT3G02100.1 25.263 475 296 16 15 455 13 462 9.24e-35 135
Msa1265230 AT4G15500.1 26.810 511 290 19 11 477 5 475 1.41e-34 135
Msa1265230 AT1G07250.1 32.530 249 143 7 216 443 219 463 2.00e-34 135
Msa1265230 AT1G05560.1 25.581 473 301 15 15 457 5 456 2.45e-34 134
Msa1265230 AT4G36770.1 37.500 208 109 3 260 446 250 457 3.02e-34 134
Msa1265230 AT2G29730.1 25.575 348 239 9 110 441 108 451 3.49e-34 134
Msa1265230 AT1G05560.2 25.581 473 301 15 15 457 55 506 4.61e-34 134
Msa1265230 AT4G14090.1 28.384 458 289 18 15 450 13 453 4.86e-34 134
Msa1265230 AT1G24100.1 27.253 466 289 16 15 450 11 456 9.36e-34 133
Msa1265230 AT2G29710.1 23.579 475 315 13 22 468 12 466 1.55e-33 132
Msa1265230 AT1G07260.1 32.549 255 140 7 212 441 213 460 1.64e-33 132
Msa1265230 AT2G30140.1 25.847 472 305 15 6 454 4 453 1.83e-33 132
Msa1265230 AT2G30140.2 25.478 471 307 14 6 454 4 452 2.94e-33 131
Msa1265230 AT3G53150.1 33.022 321 166 9 179 452 191 509 4.28e-33 132
Msa1265230 AT2G29750.1 28.322 286 181 9 174 444 182 458 5.48e-33 131
Msa1265230 AT3G21760.1 25.304 411 233 10 95 453 93 481 1.85e-32 129
Msa1265230 AT2G29740.1 30.709 254 152 6 208 441 214 463 1.87e-32 129
Msa1265230 AT1G73880.1 26.025 488 306 17 7 459 6 473 5.40e-32 128
Msa1265230 AT3G22250.1 38.144 194 110 6 259 448 269 456 8.95e-32 127
Msa1265230 AT1G05530.1 24.242 462 310 12 15 450 5 452 9.14e-32 127
Msa1265230 AT1G22370.1 30.565 301 179 9 176 452 11 305 1.36e-31 124
Msa1265230 AT2G30150.2 25.328 458 306 14 15 453 13 453 3.38e-31 125
Msa1265230 AT2G16890.2 27.292 469 298 18 15 450 7 465 7.10e-31 125
Msa1265230 AT3G21800.1 27.708 397 235 12 104 461 96 479 7.19e-31 125
Msa1265230 AT2G30150.1 24.945 453 306 14 19 453 1 437 8.17e-30 121
Msa1265230 AT2G18570.1 27.907 387 239 14 87 441 77 455 6.77e-29 119
Msa1265230 AT3G21790.1 27.614 373 228 10 117 453 113 479 9.95e-29 119
Msa1265230 AT2G18560.1 28.754 313 183 11 161 441 61 365 1.36e-28 117
Msa1265230 AT4G15260.1 28.938 273 160 7 210 452 86 354 1.59e-28 116
Msa1265230 AT2G22590.1 27.362 508 278 23 1 455 1 470 2.32e-28 117
Msa1265230 AT5G14860.1 25.314 478 304 14 15 450 7 473 2.44e-28 118
Msa1265230 AT5G65550.1 33.333 237 143 6 208 432 209 442 5.17e-28 116
Msa1265230 AT3G21750.1 23.702 443 272 12 60 452 42 468 5.28e-28 116
Msa1265230 AT2G16890.3 28.095 420 260 17 15 402 7 416 9.56e-28 115
Msa1265230 AT1G10400.1 24.947 473 303 18 13 449 3 459 1.34e-27 115
Msa1265230 AT4G15280.1 24.524 420 243 13 84 452 77 473 1.46e-27 115
Msa1265230 AT4G15280.2 24.524 420 243 13 84 452 109 505 1.84e-27 115
Msa1265230 AT1G06000.1 33.852 257 142 7 218 449 177 430 1.54e-26 112
Msa1265230 AT5G49690.1 37.853 177 103 4 266 438 267 440 3.04e-26 111
Msa1265230 AT3G21780.1 30.126 239 133 5 242 453 238 469 1.91e-25 109
Msa1265230 AT5G12890.1 26.703 367 232 12 97 435 105 462 2.35e-23 103
Msa1265230 AT5G37950.2 27.027 296 188 9 91 369 53 337 3.73e-23 100
Msa1265230 AT5G53990.1 26.279 430 272 15 21 429 13 418 4.06e-23 102
Msa1265230 AT5G37950.1 26.280 293 200 7 91 369 53 343 5.88e-23 100
Msa1265230 AT1G64910.1 26.218 431 271 16 21 429 13 418 1.43e-22 100
Msa1265230 AT5G03490.1 33.333 192 119 5 264 450 273 460 1.94e-21 97.4
Msa1265230 AT5G54010.1 25.455 440 277 17 21 433 13 428 3.03e-21 96.7
Msa1265230 AT1G51210.1 37.857 140 83 2 259 397 264 400 1.06e-20 94.7
Msa1265230 AT3G29630.1 32.234 273 157 11 180 430 156 422 2.16e-20 94.0
Msa1265230 AT1G50580.1 35.047 214 122 8 230 430 211 420 5.59e-20 92.8
Msa1265230 AT4G27570.1 30.833 240 151 8 205 431 189 426 8.70e-20 92.0
Msa1265230 AT2G22930.1 27.715 267 174 9 180 430 156 419 1.10e-19 91.7
Msa1265230 AT4G27560.1 30.126 239 152 8 205 430 189 425 6.59e-19 89.7
Msa1265230 AT3G29630.2 35.593 177 102 5 266 430 220 396 1.27e-18 88.6
Msa1265230 AT4G09500.2 28.030 264 175 8 180 429 156 418 1.51e-17 85.5
Msa1265230 AT1G64920.1 24.516 465 296 16 21 457 13 450 1.69e-16 82.0
Msa1265230 AT4G09500.1 35.329 167 97 5 274 429 227 393 6.75e-16 80.1
Msa1265230 AT4G01070.2 26.243 362 218 13 8 336 1 346 2.44e-13 71.6
Msa1265230 AT5G54060.1 30.409 171 107 5 266 426 268 436 1.26e-12 70.1

Find 107 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAACAATGTTACACAAAA+TGG 0.094461 8_2:+69391058 Msa1265230:CDS
TTCCATTTATTTGGTCCTTT+AGG 0.142761 8_2:+69391360 Msa1265230:CDS
CACCAACTGATGAGTGTTTA+AGG 0.162555 8_2:-69391472 None:intergenic
TCCATTTATTTGGTCCTTTA+GGG 0.197862 8_2:+69391361 Msa1265230:CDS
CTTATTACATGTGGCTGTTT+TGG 0.204921 8_2:+69388903 Msa1265230:CDS
TATTGAAGCAAATGAGTTTA+TGG 0.246503 8_2:-69391111 None:intergenic
CCTTGAGTTTCACAATCTTT+TGG 0.254936 8_2:-69391715 None:intergenic
CCCCTAAAGGACCAAATAAA+TGG 0.265046 8_2:-69391362 None:intergenic
AATGTGGATTTCCATTTATT+TGG 0.269480 8_2:+69391351 Msa1265230:CDS
TTTAACTCATTCTCAATAAG+AGG 0.274886 8_2:-69391137 None:intergenic
ATGCCAAATGGGTTCCTCTT+TGG 0.313159 8_2:+69389280 Msa1265230:CDS
TTCAAAGCTGTTGAACAAAA+TGG 0.331388 8_2:+69391746 Msa1265230:CDS
AATACTTATAGAAAGTGTTT+TGG 0.331772 8_2:+69391595 Msa1265230:CDS
CCAGAAGGTTACGTACCTTC+TGG 0.338949 8_2:+69389102 Msa1265230:CDS
AAAATACATAAGGGTGTTCA+TGG 0.355834 8_2:+69391826 Msa1265230:CDS
AAAAGTATCGATGTTCTTCC+TGG 0.366322 8_2:+69390972 Msa1265230:CDS
AAGAATGAAAATGTAACTTT+AGG 0.369656 8_2:-69388991 None:intergenic
TGGGTTCCTCTTTGGACTGC+AGG 0.370371 8_2:+69389288 Msa1265230:CDS
TGGAAATCCACATTCCTCTA+AGG 0.370941 8_2:-69391342 None:intergenic
ACATTATAATGCTTTATGTT+AGG 0.373608 8_2:-69389066 None:intergenic
AGAATCTACTAAGAAAGCTT+TGG 0.385242 8_2:+69391655 Msa1265230:CDS
CAATATAAAGGAGAAGAAAA+TGG 0.390780 8_2:-69388780 None:intergenic
GCAACTCATCTGGAAATGTT+TGG 0.392354 8_2:+69391878 Msa1265230:CDS
ACTCAATAACGCAACTCATC+TGG 0.392766 8_2:+69391868 Msa1265230:CDS
GCAACAATGTTACACAAAAT+GGG 0.395935 8_2:+69391059 Msa1265230:CDS
TCATCTGGAAATGTTTGGTT+TGG 0.396033 8_2:+69391883 Msa1265230:CDS
CCAGAAGGTACGTAACCTTC+TGG 0.398953 8_2:-69389102 None:intergenic
TTAACAATGTGTACCTTCCT+TGG 0.405770 8_2:-69389367 None:intergenic
AGTTGCGTTATTGAGTTGAT+TGG 0.410560 8_2:-69391861 None:intergenic
AGTTGGAAAGCACAATATAA+AGG 0.416448 8_2:-69388792 None:intergenic
TCAGTGGTGTATATAAGCTT+TGG 0.422010 8_2:+69391272 Msa1265230:CDS
GATGAAGCTGTGGCAGAGAC+AGG 0.424404 8_2:+69389189 Msa1265230:CDS
CAGAAGGTTACGTACCTTCT+GGG 0.427356 8_2:+69389103 Msa1265230:CDS
TGCATTGGCAGAGTCCTTAG+AGG 0.431105 8_2:+69391328 Msa1265230:CDS
CCCTCCTTTCTCACTTGACA+TGG 0.441918 8_2:-69391684 None:intergenic
ATTTAGTAGCAATTTGAACT+TGG 0.447933 8_2:-69391162 None:intergenic
TTCCTCAGGATCACCCCTAA+AGG 0.463691 8_2:-69391375 None:intergenic
CTGAGGAAATGCATGCCAAA+TGG 0.473273 8_2:+69389268 Msa1265230:CDS
TTCTGGGTGGAATTCTGTGT+TGG 0.473653 8_2:+69391508 Msa1265230:CDS
AAGCATTATAATGTTCATGA+TGG 0.478393 8_2:+69389075 Msa1265230:CDS
GAGCAGCATGTGAGCCAAAT+GGG 0.481696 8_2:-69388930 None:intergenic
GCCTTTAGCTCGGGAAAACC+AGG 0.481777 8_2:-69390990 None:intergenic
TGAGTTTATGGCAACTGCAT+TGG 0.482638 8_2:-69391099 None:intergenic
TTGTGTAACATTGTTGCAAA+TGG 0.485442 8_2:-69391053 None:intergenic
GGAGCAGCATGTGAGCCAAA+TGG 0.492066 8_2:-69388931 None:intergenic
TTCAAATTGCTACTAAATGT+TGG 0.493383 8_2:+69391167 Msa1265230:CDS
AGTCCAAAGAGGAACCCATT+TGG 0.494298 8_2:-69389283 None:intergenic
AAAAGGTAAAATTGTTGCAT+GGG 0.495249 8_2:+69391433 Msa1265230:CDS
AACCATCGAACTTGGGAACC+CGG 0.496487 8_2:+69391931 Msa1265230:three_prime_UTR
GGGTTCCTCTTTGGACTGCA+GGG 0.506293 8_2:+69389289 Msa1265230:CDS
ACCTCATGAGCTCACTGCAT+TGG 0.506888 8_2:+69391313 Msa1265230:CDS
TTAACCATGTCAAGTGAGAA+AGG 0.512542 8_2:+69391680 Msa1265230:CDS
CAAAAGGTAAAATTGTTGCA+TGG 0.512626 8_2:+69391432 Msa1265230:CDS
TCTGTGTTGGAATGCATTGT+CGG 0.519338 8_2:+69391521 Msa1265230:CDS
GAAGAAAATGGCAGGACAGT+GGG 0.524050 8_2:-69388768 None:intergenic
TGCTAAGCACCCGTGTTCAT+CGG 0.530272 8_2:-69391225 None:intergenic
TGAGGAAATGCATGCCAAAT+GGG 0.530461 8_2:+69389269 Msa1265230:CDS
ATGCTTAAAGTTCTCTTGCA+TGG 0.530855 8_2:-69389160 None:intergenic
AAATCAGAAGCCTTTAGCTC+GGG 0.531108 8_2:-69390999 None:intergenic
CTTGTCAACACCACAGCGTA+AGG 0.535270 8_2:+69391199 Msa1265230:CDS
GTCCTTTAGGGGTGATCCTG+AGG 0.536130 8_2:+69391373 Msa1265230:CDS
ATGCAGTGAGCTCATGAGGT+GGG 0.537832 8_2:-69391310 None:intergenic
AAATAAAGTATCATTTGTTG+TGG 0.541251 8_2:-69389022 None:intergenic
CCATTTATTTGGTCCTTTAG+GGG 0.543071 8_2:+69391362 Msa1265230:CDS
ATTGGTGTGGGTGTTGACAA+TGG 0.545588 8_2:+69391620 Msa1265230:CDS
CAAATCAGAAGCCTTTAGCT+CGG 0.556483 8_2:-69391000 None:intergenic
TTAACTCATTCTCAATAAGA+GGG 0.560380 8_2:-69391136 None:intergenic
AGAAATTGAGAGAAGAGAAG+AGG 0.562780 8_2:-69388837 None:intergenic
CCATGTCAAGTGAGAAAGGA+GGG 0.563799 8_2:+69391684 Msa1265230:CDS
GCCAATGCAGTGAGCTCATG+AGG 0.564169 8_2:-69391314 None:intergenic
GACCGGGTTCCCAAGTTCGA+TGG 0.564811 8_2:-69391933 None:intergenic
ATCCTTAAACACTCATCAGT+TGG 0.566039 8_2:+69391470 Msa1265230:CDS
ACAAAATGGTACCTCTGCAA+TGG 0.571024 8_2:+69391760 Msa1265230:CDS
TGCAGTGAGCTCATGAGGTG+GGG 0.571241 8_2:-69391309 None:intergenic
CAGAGAAAAGACTGGCTCCA+AGG 0.573763 8_2:+69389350 Msa1265230:CDS
ATAAAGGAGAAGAAAATGGC+AGG 0.576931 8_2:-69388776 None:intergenic
AAGGCTTCTGATTTGCCTGA+GGG 0.579054 8_2:+69391008 Msa1265230:CDS
GTATATAAGCTTTGGAAGTG+TGG 0.580031 8_2:+69391280 Msa1265230:CDS
GATCTTATCAGAGAAAAGAC+TGG 0.581356 8_2:+69389342 Msa1265230:CDS
ATGGCAACTGCATTGGCTCG+TGG 0.586348 8_2:-69391092 None:intergenic
GAAAAGACTGGCTCCAAGGA+AGG 0.586393 8_2:+69389354 Msa1265230:CDS
GCAGAGTCCTTAGAGGAATG+TGG 0.588171 8_2:+69391335 Msa1265230:CDS
CGTAAGGCTTCCGATGAACA+CGG 0.589774 8_2:+69391215 Msa1265230:CDS
ATGAACACGGGTGCTTAGCA+TGG 0.590839 8_2:+69391228 Msa1265230:CDS
CCAAAAGATTGTGAAACTCA+AGG 0.593571 8_2:+69391715 Msa1265230:CDS
AAATACATAAGGGTGTTCAT+GGG 0.601481 8_2:+69391827 Msa1265230:CDS
TGTTTAAGGATTTCAACTTG+AGG 0.610755 8_2:-69391458 None:intergenic
AAAGGCTTCTGATTTGCCTG+AGG 0.612284 8_2:+69391007 Msa1265230:CDS
GTTCATGATGGATTGCCAGA+AGG 0.614560 8_2:+69389087 Msa1265230:CDS
CCACTGAAGAATTCTCATGT+TGG 0.621777 8_2:-69391256 None:intergenic
ATGAAGCTGTGGCAGAGACA+GGG 0.623701 8_2:+69389190 Msa1265230:CDS
TGTGGTGTTGACAAGTTGAA+TGG 0.623930 8_2:-69391191 None:intergenic
GCAGTGAGCTCATGAGGTGG+GGG 0.627099 8_2:-69391308 None:intergenic
TGAGGCCCTGCAGTCCAAAG+AGG 0.631764 8_2:-69389294 None:intergenic
AATGCAGTGAGCTCATGAGG+TGG 0.632823 8_2:-69391311 None:intergenic
GTTTGGTGCGGATCTTGCTG+AGG 0.633911 8_2:+69389251 Msa1265230:CDS
GGTTCACGTGGATTCCCAGA+AGG 0.638759 8_2:-69389117 None:intergenic
AGAAGAAAATGGCAGGACAG+TGG 0.641508 8_2:-69388769 None:intergenic
ACCATGTCAAGTGAGAAAGG+AGG 0.644406 8_2:+69391683 Msa1265230:CDS
GTAAGGCTTCCGATGAACAC+GGG 0.650703 8_2:+69391216 Msa1265230:CDS
AGTAGTGAAATCCATTGCAG+AGG 0.654416 8_2:-69391771 None:intergenic
GCATGTTATTGATGAAGCTG+TGG 0.657226 8_2:+69389179 Msa1265230:CDS
TGGTAACAACTTATTACATG+TGG 0.676074 8_2:+69388894 Msa1265230:CDS
ACATGTGTAAGAAGAGAGTG+AGG 0.678080 8_2:-69389312 None:intergenic
GTGTTGGAATGCATTGTCGG+TGG 0.680590 8_2:+69391524 Msa1265230:CDS
TCATCGGAAGCCTTACGCTG+TGG 0.685683 8_2:-69391209 None:intergenic
CCAACATGAGAATTCTTCAG+TGG 0.690370 8_2:+69391256 Msa1265230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTATTATTATTTTAA+GGG - chr8_2:69390798-69390817 None:intergenic 0.0%
!!! AAATTATTATTATTATTTTA+AGG - chr8_2:69390799-69390818 None:intergenic 0.0%
!! ATAAGAAAAAAAAATAAAGT+TGG - chr8_2:69388812-69388831 None:intergenic 10.0%
!!! ATTTTGTTAATTAAAGTTAT+TGG + chr8_2:69389411-69389430 Msa1265230:intron 10.0%
!! AAATTAAAATTAGACATATA+TGG + chr8_2:69389457-69389476 Msa1265230:intron 10.0%
!!! TATTTTGAAACAAATTTTTT+TGG - chr8_2:69389926-69389945 None:intergenic 10.0%
!! TTAAAGAAAAAATAATACTT+TGG - chr8_2:69390030-69390049 None:intergenic 10.0%
!!! AAGTTTTAAAAAATACATAA+GGG + chr8_2:69391817-69391836 Msa1265230:CDS 10.0%
!!! AAATTCAAATTTTATTTCAA+CGG - chr8_2:69391958-69391977 None:intergenic 10.0%
!! TTATAAGTACTTAAAAATTT+AGG + chr8_2:69392042-69392061 Msa1265230:three_prime_UTR 10.0%
!! ACTAAAAGAAAAGATAAATT+AGG - chr8_2:69389522-69389541 None:intergenic 15.0%
!! TTCAATTTATACTAAAAGAA+TGG - chr8_2:69389557-69389576 None:intergenic 15.0%
!!! TTTTTAATATTAAAAGACTG+CGG - chr8_2:69390347-69390366 None:intergenic 15.0%
!!! CTACTTTTATCTTTTAATAA+GGG - chr8_2:69390674-69390693 None:intergenic 15.0%
!!! ACTACTTTTATCTTTTAATA+AGG - chr8_2:69390675-69390694 None:intergenic 15.0%
!! TAATTTACTGTACAAATTAA+TGG + chr8_2:69390813-69390832 Msa1265230:intron 15.0%
!!! GAAGTTTTAAAAAATACATA+AGG + chr8_2:69391816-69391835 Msa1265230:CDS 15.0%
!! AAGAATGAAAATGTAACTTT+AGG - chr8_2:69388994-69389013 None:intergenic 20.0%
!!! AAATAAAGTATCATTTGTTG+TGG - chr8_2:69389025-69389044 None:intergenic 20.0%
!!! CAAATGATACTTTATTTTCT+AGG + chr8_2:69389028-69389047 Msa1265230:CDS 20.0%
!! ACATTATAATGCTTTATGTT+AGG - chr8_2:69389069-69389088 None:intergenic 20.0%
!!! TACAATTTTATGTGACTATT+TGG - chr8_2:69389585-69389604 None:intergenic 20.0%
!! GAGTTTAAAAGAAAAAGAAT+TGG + chr8_2:69389656-69389675 Msa1265230:intron 20.0%
!! TGCAAATAAAACTTAACAAA+GGG + chr8_2:69389833-69389852 Msa1265230:intron 20.0%
!!! TTCAAAATAAATGTCACTTT+CGG + chr8_2:69389937-69389956 Msa1265230:intron 20.0%
!! GTAACATAGTATTAATTGAA+GGG - chr8_2:69390000-69390019 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG - chr8_2:69390001-69390020 None:intergenic 20.0%
!! AAACAAACTAATAGTTGATT+AGG + chr8_2:69390054-69390073 Msa1265230:intron 20.0%
!! AATAGTTGATTAGGATAATT+TGG + chr8_2:69390063-69390082 Msa1265230:intron 20.0%
!!! GGAGTAACTTTTTATTAAAA+GGG + chr8_2:69390171-69390190 Msa1265230:intron 20.0%
!!! TTTTAATATTAAAAGACTGC+GGG - chr8_2:69390346-69390365 None:intergenic 20.0%
!!! AATACTTATAGAAAGTGTTT+TGG + chr8_2:69391595-69391614 Msa1265230:CDS 20.0%
! CAATATAAAGGAGAAGAAAA+TGG - chr8_2:69388783-69388802 None:intergenic 25.0%
! AGCTTCAAAAATGAAATGAA+TGG + chr8_2:69388874-69388893 Msa1265230:CDS 25.0%
!!! CTATAGCAATTTTTTTCACT+AGG - chr8_2:69388966-69388985 None:intergenic 25.0%
! AGTGAAAAAAATTGCTATAG+AGG + chr8_2:69388966-69388985 Msa1265230:CDS 25.0%
! AAGCATTATAATGTTCATGA+TGG + chr8_2:69389075-69389094 Msa1265230:CDS 25.0%
! GTCTTAATGAAGAGAAAAAT+TGG - chr8_2:69389141-69389160 None:intergenic 25.0%
! ATATATGGAATTCCAAACTT+GGG + chr8_2:69389472-69389491 Msa1265230:intron 25.0%
! AGGAAGAAAAAATTACTTCA+CGG - chr8_2:69389502-69389521 None:intergenic 25.0%
!!! ATTTTAGTACTATCATCACT+AGG + chr8_2:69389634-69389653 Msa1265230:intron 25.0%
! GAATTGGAAACAATAATAGA+AGG + chr8_2:69389672-69389691 Msa1265230:intron 25.0%
!! GATTTCAAATTTTCAACCAT+TGG + chr8_2:69389760-69389779 Msa1265230:intron 25.0%
!!! TTGTTAAGTTTTATTTGCAC+CGG - chr8_2:69389832-69389851 None:intergenic 25.0%
! GTGCAAATAAAACTTAACAA+AGG + chr8_2:69389832-69389851 Msa1265230:intron 25.0%
!! GGGAGTAACTTTTTATTAAA+AGG + chr8_2:69390170-69390189 Msa1265230:intron 25.0%
!! AGTTATTGATAGTTGATTAG+TGG + chr8_2:69390387-69390406 Msa1265230:intron 25.0%
!! GTTATTGATAGTTGATTAGT+GGG + chr8_2:69390388-69390407 Msa1265230:intron 25.0%
! TAAAAGTTATTTAACCAGCT+AGG + chr8_2:69390887-69390906 Msa1265230:intron 25.0%
! TATTGAAGCAAATGAGTTTA+TGG - chr8_2:69391114-69391133 None:intergenic 25.0%
! TTAACTCATTCTCAATAAGA+GGG - chr8_2:69391139-69391158 None:intergenic 25.0%
! TTTAACTCATTCTCAATAAG+AGG - chr8_2:69391140-69391159 None:intergenic 25.0%
! ATTTAGTAGCAATTTGAACT+TGG - chr8_2:69391165-69391184 None:intergenic 25.0%
! TTCAAATTGCTACTAAATGT+TGG + chr8_2:69391167-69391186 Msa1265230:CDS 25.0%
! AATGTGGATTTCCATTTATT+TGG + chr8_2:69391351-69391370 Msa1265230:CDS 25.0%
! AAAAGGTAAAATTGTTGCAT+GGG + chr8_2:69391433-69391452 Msa1265230:CDS 25.0%
! AAAAAAGGTCTACTAATCAT+TGG - chr8_2:69391554-69391573 None:intergenic 25.0%
!!! ATGATTAGTAGACCTTTTTT+CGG + chr8_2:69391554-69391573 Msa1265230:CDS 25.0%
! AGTTGGAAAGCACAATATAA+AGG - chr8_2:69388795-69388814 None:intergenic 30.0%
TGGTAACAACTTATTACATG+TGG + chr8_2:69388894-69388913 Msa1265230:CDS 30.0%
!!! CAATTTTTTTCACTAGGCTA+AGG - chr8_2:69388960-69388979 None:intergenic 30.0%
!!! TGATTACTGACGCATTTTTT+TGG + chr8_2:69389229-69389248 Msa1265230:CDS 30.0%
CATATATGGAATTCCAAACT+TGG + chr8_2:69389471-69389490 Msa1265230:intron 30.0%
! TGGTTGAAAATTTGAAATCG+TGG - chr8_2:69389759-69389778 None:intergenic 30.0%
! TTTAAGACCATGTACCTATT+AGG + chr8_2:69390243-69390262 Msa1265230:intron 30.0%
TAAGAACTTTATGTGAGATC+TGG + chr8_2:69390418-69390437 Msa1265230:intron 30.0%
AAGAACTTTATGTGAGATCT+GGG + chr8_2:69390419-69390438 Msa1265230:intron 30.0%
!!! CCATTTTTGGGTTCTTAAAT+GGG - chr8_2:69390515-69390534 None:intergenic 30.0%
CCATTTAAGAACCCAAAAAT+GGG + chr8_2:69390513-69390532 Msa1265230:intron 30.0%
TTGAAGATTAATTACCTAGC+TGG - chr8_2:69390904-69390923 None:intergenic 30.0%
! ATATCTTTTATTACTCCCTC+AGG - chr8_2:69391026-69391045 None:intergenic 30.0%
TTGTGTAACATTGTTGCAAA+TGG - chr8_2:69391056-69391075 None:intergenic 30.0%
TGCAACAATGTTACACAAAA+TGG + chr8_2:69391058-69391077 Msa1265230:CDS 30.0%
GCAACAATGTTACACAAAAT+GGG + chr8_2:69391059-69391078 Msa1265230:CDS 30.0%
TTCCATTTATTTGGTCCTTT+AGG + chr8_2:69391360-69391379 Msa1265230:CDS 30.0%
TCCATTTATTTGGTCCTTTA+GGG + chr8_2:69391361-69391380 Msa1265230:CDS 30.0%
! AAAATTGCCAAAAGGGTTTT+TGG + chr8_2:69391397-69391416 Msa1265230:CDS 30.0%
TTGGAAAGGACAAAAACAAA+AGG + chr8_2:69391416-69391435 Msa1265230:CDS 30.0%
CAAAAGGTAAAATTGTTGCA+TGG + chr8_2:69391432-69391451 Msa1265230:CDS 30.0%
TGTTTAAGGATTTCAACTTG+AGG - chr8_2:69391461-69391480 None:intergenic 30.0%
!!! ATAGAAAGTGTTTTGGAGAT+TGG + chr8_2:69391602-69391621 Msa1265230:CDS 30.0%
AGAATCTACTAAGAAAGCTT+TGG + chr8_2:69391655-69391674 Msa1265230:CDS 30.0%
TTCAAAGCTGTTGAACAAAA+TGG + chr8_2:69391746-69391765 Msa1265230:CDS 30.0%
!! AAAATACATAAGGGTGTTCA+TGG + chr8_2:69391826-69391845 Msa1265230:CDS 30.0%
!! AAATACATAAGGGTGTTCAT+GGG + chr8_2:69391827-69391846 Msa1265230:CDS 30.0%
!! AAATTTTATTTCAACGGACC+GGG - chr8_2:69391952-69391971 None:intergenic 30.0%
!! CAAATTTTATTTCAACGGAC+CGG - chr8_2:69391953-69391972 None:intergenic 30.0%
ATAAAGGAGAAGAAAATGGC+AGG - chr8_2:69388779-69388798 None:intergenic 35.0%
AGAAATTGAGAGAAGAGAAG+AGG - chr8_2:69388840-69388859 None:intergenic 35.0%
! CTTATTACATGTGGCTGTTT+TGG + chr8_2:69388903-69388922 Msa1265230:CDS 35.0%
! AAGAGAAAAATTGGTTCACG+TGG - chr8_2:69389132-69389151 None:intergenic 35.0%
ATGCTTAAAGTTCTCTTGCA+TGG - chr8_2:69389163-69389182 None:intergenic 35.0%
!!! ACTGACGCATTTTTTTGGTT+TGG + chr8_2:69389234-69389253 Msa1265230:CDS 35.0%
GATCTTATCAGAGAAAAGAC+TGG + chr8_2:69389342-69389361 Msa1265230:CDS 35.0%
TTAACAATGTGTACCTTCCT+TGG - chr8_2:69389370-69389389 None:intergenic 35.0%
GTGCATTAATCACAAACTTC+AGG + chr8_2:69389733-69389752 Msa1265230:intron 35.0%
! AAAACTTAACAAAGGGTGTG+CGG + chr8_2:69389840-69389859 Msa1265230:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr8_2:69390146-69390165 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_2:69390146-69390165 Msa1265230:intron 35.0%
! TAGAGTACCTAATAGGTACA+TGG - chr8_2:69390253-69390272 None:intergenic 35.0%
TACCTATTAGGTACTCTAGT+GGG + chr8_2:69390255-69390274 Msa1265230:intron 35.0%
!! TTAAGACCCTCACTTTTAAG+CGG + chr8_2:69390318-69390337 Msa1265230:intron 35.0%
GGAGTGATTGAGTGTTTATT+AGG + chr8_2:69390444-69390463 Msa1265230:intron 35.0%
CCCATTTAAGAACCCAAAAA+TGG + chr8_2:69390512-69390531 Msa1265230:intron 35.0%
!!! CCCATTTTTGGGTTCTTAAA+TGG - chr8_2:69390516-69390535 None:intergenic 35.0%
! TATGCTAACCAAAGCACTTA+GGG - chr8_2:69390650-69390669 None:intergenic 35.0%
! TTATGCTAACCAAAGCACTT+AGG - chr8_2:69390651-69390670 None:intergenic 35.0%
ATTCCTTAACAATTGCCCTA+AGG + chr8_2:69390756-69390775 Msa1265230:intron 35.0%
TTCCTTAACAATTGCCCTAA+GGG + chr8_2:69390757-69390776 Msa1265230:intron 35.0%
! CATCGATACTTTTGACATCA+TGG - chr8_2:69390965-69390984 None:intergenic 35.0%
!! AAAAGTATCGATGTTCTTCC+TGG + chr8_2:69390972-69390991 Msa1265230:CDS 35.0%
TCAGTGGTGTATATAAGCTT+TGG + chr8_2:69391272-69391291 Msa1265230:CDS 35.0%
!! GTATATAAGCTTTGGAAGTG+TGG + chr8_2:69391280-69391299 Msa1265230:CDS 35.0%
CCATTTATTTGGTCCTTTAG+GGG + chr8_2:69391362-69391381 Msa1265230:CDS 35.0%
CTGAGGAAAAATTGCCAAAA+GGG + chr8_2:69391390-69391409 Msa1265230:CDS 35.0%
ATCCTTAAACACTCATCAGT+TGG + chr8_2:69391470-69391489 Msa1265230:CDS 35.0%
!! GTGTGTTTTTGACTCATTCT+GGG + chr8_2:69391492-69391511 Msa1265230:CDS 35.0%
TTAACCATGTCAAGTGAGAA+AGG + chr8_2:69391680-69391699 Msa1265230:CDS 35.0%
! CCTTGAGTTTCACAATCTTT+TGG - chr8_2:69391718-69391737 None:intergenic 35.0%
CCAAAAGATTGTGAAACTCA+AGG + chr8_2:69391715-69391734 Msa1265230:CDS 35.0%
!! AGTTGCGTTATTGAGTTGAT+TGG - chr8_2:69391864-69391883 None:intergenic 35.0%
TCATCTGGAAATGTTTGGTT+TGG + chr8_2:69391883-69391902 Msa1265230:CDS 35.0%
! TGATTTTGAACCATCGAACT+TGG + chr8_2:69391923-69391942 Msa1265230:three_prime_UTR 35.0%
! GATTTTGAACCATCGAACTT+GGG + chr8_2:69391924-69391943 Msa1265230:three_prime_UTR 35.0%
! TTTTTCACTAGGCTAAGGAG+TGG - chr8_2:69388955-69388974 None:intergenic 40.0%
GCATGTTATTGATGAAGCTG+TGG + chr8_2:69389179-69389198 Msa1265230:CDS 40.0%
!!! CGCATTTTTTTGGTTTGGTG+CGG + chr8_2:69389239-69389258 Msa1265230:CDS 40.0%
TGAGGAAATGCATGCCAAAT+GGG + chr8_2:69389269-69389288 Msa1265230:CDS 40.0%
ACATGTGTAAGAAGAGAGTG+AGG - chr8_2:69389315-69389334 None:intergenic 40.0%
TAACGTGCCTATGTGACATT+TGG - chr8_2:69389791-69389810 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+AGG - chr8_2:69390150-69390169 None:intergenic 40.0%
TTCCTCAATCTGTGTGCAAT+TGG + chr8_2:69390120-69390139 Msa1265230:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_2:69390150-69390169 Msa1265230:intron 40.0%
TGTCTTAGACCATCTCCATT+GGG + chr8_2:69390207-69390226 Msa1265230:intron 40.0%
AATAGTTTAGACCCTCCCAA+TGG - chr8_2:69390225-69390244 None:intergenic 40.0%
GTACCTATTAGGTACTCTAG+TGG + chr8_2:69390254-69390273 Msa1265230:intron 40.0%
! TTCCCACTAGAGTACCTAAT+AGG - chr8_2:69390260-69390279 None:intergenic 40.0%
! TAGTGGGAAGAATCTTTTCC+AGG + chr8_2:69390271-69390290 Msa1265230:intron 40.0%
! AGTGGGAAGAATCTTTTCCA+GGG + chr8_2:69390272-69390291 Msa1265230:intron 40.0%
! TTCCAGGGTCTTATAAGACA+CGG + chr8_2:69390287-69390306 Msa1265230:intron 40.0%
!! TAAGACCCTCACTTTTAAGC+GGG + chr8_2:69390319-69390338 Msa1265230:intron 40.0%
ACTTTATGTGAGATCTGGGT+TGG + chr8_2:69390423-69390442 Msa1265230:intron 40.0%
TAAGAACCCAAAAATGGGTG+TGG + chr8_2:69390518-69390537 Msa1265230:intron 40.0%
AACTAATGCCCTAAGTGCTT+TGG + chr8_2:69390639-69390658 Msa1265230:intron 40.0%
! AAATCAGAAGCCTTTAGCTC+GGG - chr8_2:69391002-69391021 None:intergenic 40.0%
CAAATCAGAAGCCTTTAGCT+CGG - chr8_2:69391003-69391022 None:intergenic 40.0%
TGAGTTTATGGCAACTGCAT+TGG - chr8_2:69391102-69391121 None:intergenic 40.0%
!! TGTGGTGTTGACAAGTTGAA+TGG - chr8_2:69391194-69391213 None:intergenic 40.0%
CCACTGAAGAATTCTCATGT+TGG - chr8_2:69391259-69391278 None:intergenic 40.0%
CCAACATGAGAATTCTTCAG+TGG + chr8_2:69391256-69391275 Msa1265230:CDS 40.0%
TGGAAATCCACATTCCTCTA+AGG - chr8_2:69391345-69391364 None:intergenic 40.0%
CCCCTAAAGGACCAAATAAA+TGG - chr8_2:69391365-69391384 None:intergenic 40.0%
! CCTTTTGGCAATTTTTCCTC+AGG - chr8_2:69391392-69391411 None:intergenic 40.0%
CCTGAGGAAAAATTGCCAAA+AGG + chr8_2:69391389-69391408 Msa1265230:CDS 40.0%
!! TGCCAAAAGGGTTTTTGGAA+AGG + chr8_2:69391402-69391421 Msa1265230:CDS 40.0%
! GTCCTTTCCAAAAACCCTTT+TGG - chr8_2:69391407-69391426 None:intergenic 40.0%
CACCAACTGATGAGTGTTTA+AGG - chr8_2:69391475-69391494 None:intergenic 40.0%
!! GGTGTGTTTTTGACTCATTC+TGG + chr8_2:69391491-69391510 Msa1265230:CDS 40.0%
!! TGTTTTTGACTCATTCTGGG+TGG + chr8_2:69391495-69391514 Msa1265230:CDS 40.0%
TCTGTGTTGGAATGCATTGT+CGG + chr8_2:69391521-69391540 Msa1265230:CDS 40.0%
!!! AGACCTTTTTTCGGAGATCA+AGG + chr8_2:69391563-69391582 Msa1265230:CDS 40.0%
!!! GACCTTTTTTCGGAGATCAA+GGG + chr8_2:69391564-69391583 Msa1265230:CDS 40.0%
AACCCTTGATCTCCGAAAAA+AGG - chr8_2:69391569-69391588 None:intergenic 40.0%
!!! AAGTGTTTTGGAGATTGGTG+TGG + chr8_2:69391607-69391626 Msa1265230:CDS 40.0%
!!! AGTGTTTTGGAGATTGGTGT+GGG + chr8_2:69391608-69391627 Msa1265230:CDS 40.0%
ACAAAATGGTACCTCTGCAA+TGG + chr8_2:69391760-69391779 Msa1265230:CDS 40.0%
AGTAGTGAAATCCATTGCAG+AGG - chr8_2:69391774-69391793 None:intergenic 40.0%
ACTCAATAACGCAACTCATC+TGG + chr8_2:69391868-69391887 Msa1265230:CDS 40.0%
GCAACTCATCTGGAAATGTT+TGG + chr8_2:69391878-69391897 Msa1265230:CDS 40.0%
GAAGAAAATGGCAGGACAGT+GGG - chr8_2:69388771-69388790 None:intergenic 45.0%
AGAAGAAAATGGCAGGACAG+TGG - chr8_2:69388772-69388791 None:intergenic 45.0%
!!! GCTGTTTTGGCATTCCCATT+TGG + chr8_2:69388916-69388935 Msa1265230:CDS 45.0%
!! GTTCATGATGGATTGCCAGA+AGG + chr8_2:69389087-69389106 Msa1265230:CDS 45.0%
CAGAAGGTTACGTACCTTCT+GGG + chr8_2:69389103-69389122 Msa1265230:CDS 45.0%
CTGAGGAAATGCATGCCAAA+TGG + chr8_2:69389268-69389287 Msa1265230:CDS 45.0%
! ATGCCAAATGGGTTCCTCTT+TGG + chr8_2:69389280-69389299 Msa1265230:CDS 45.0%
AGTCCAAAGAGGAACCCATT+TGG - chr8_2:69389286-69389305 None:intergenic 45.0%
GTGACATTTGGCAGTACCAA+TGG - chr8_2:69389779-69389798 None:intergenic 45.0%
GGTACTGCCAAATGTCACAT+AGG + chr8_2:69389781-69389800 Msa1265230:intron 45.0%
AGCCAATTGCACACAGATTG+AGG - chr8_2:69390125-69390144 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_2:69390149-69390168 Msa1265230:intron 45.0%
GTGTCTTAGACCATCTCCAT+TGG + chr8_2:69390206-69390225 Msa1265230:intron 45.0%
TTAGACCATCTCCATTGGGA+GGG + chr8_2:69390211-69390230 Msa1265230:intron 45.0%
! TCCAGGGTCTTATAAGACAC+GGG + chr8_2:69390288-69390307 Msa1265230:intron 45.0%
!! GAGCATCCACACCCATTTTT+GGG - chr8_2:69390527-69390546 None:intergenic 45.0%
!! AGAGCATCCACACCCATTTT+TGG - chr8_2:69390528-69390547 None:intergenic 45.0%
TGCCCTTAGGGCAATTGTTA+AGG - chr8_2:69390762-69390781 None:intergenic 45.0%
TTTGCTAACCAGTGCCCTTA+GGG - chr8_2:69390774-69390793 None:intergenic 45.0%
! TTTTGCTAACCAGTGCCCTT+AGG - chr8_2:69390775-69390794 None:intergenic 45.0%
! AAAGGCTTCTGATTTGCCTG+AGG + chr8_2:69391007-69391026 Msa1265230:CDS 45.0%
! AAGGCTTCTGATTTGCCTGA+GGG + chr8_2:69391008-69391027 Msa1265230:CDS 45.0%
TTCTGGGTGGAATTCTGTGT+TGG + chr8_2:69391508-69391527 Msa1265230:CDS 45.0%
!! ATTGGTGTGGGTGTTGACAA+TGG + chr8_2:69391620-69391639 Msa1265230:CDS 45.0%
ACCATGTCAAGTGAGAAAGG+AGG + chr8_2:69391683-69391702 Msa1265230:CDS 45.0%
CCATGTCAAGTGAGAAAGGA+GGG + chr8_2:69391684-69391703 Msa1265230:CDS 45.0%
!!! AAATAAAATTTGAATTTTTT+AGG + chr8_2:69391961-69391980 Msa1265230:three_prime_UTR 5.0%
GAGCAGCATGTGAGCCAAAT+GGG - chr8_2:69388933-69388952 None:intergenic 50.0%
! CCAGAAGGTACGTAACCTTC+TGG - chr8_2:69389105-69389124 None:intergenic 50.0%
CCAGAAGGTTACGTACCTTC+TGG + chr8_2:69389102-69389121 Msa1265230:CDS 50.0%
ATGAAGCTGTGGCAGAGACA+GGG + chr8_2:69389190-69389209 Msa1265230:CDS 50.0%
! CAGAGAAAAGACTGGCTCCA+AGG + chr8_2:69389350-69389369 Msa1265230:CDS 50.0%
! GAAAAGACTGGCTCCAAGGA+AGG + chr8_2:69389354-69389373 Msa1265230:CDS 50.0%
CTTCACGGTACACCCAAGTT+TGG - chr8_2:69389487-69389506 None:intergenic 50.0%
GTCACATAGGCACGTTAGTC+CGG + chr8_2:69389794-69389813 Msa1265230:intron 50.0%
CACGTTAGTCCGGTAGTCTT+TGG + chr8_2:69389804-69389823 Msa1265230:intron 50.0%
AGTCCGGTAGTCTTTGGATC+CGG + chr8_2:69389810-69389829 Msa1265230:intron 50.0%
CTTAGACCATCTCCATTGGG+AGG + chr8_2:69390210-69390229 Msa1265230:intron 50.0%
TTAGACCCTCCCAATGGAGA+TGG - chr8_2:69390219-69390238 None:intergenic 50.0%
! CCAGGGTCTTATAAGACACG+GGG + chr8_2:69390289-69390308 Msa1265230:intron 50.0%
TGGGTGTGGATGCTCTTCTT+AGG + chr8_2:69390532-69390551 Msa1265230:intron 50.0%
GGGTGTGGATGCTCTTCTTA+GGG + chr8_2:69390533-69390552 Msa1265230:intron 50.0%
! AACAATTGCCCTAAGGGCAC+TGG + chr8_2:69390763-69390782 Msa1265230:intron 50.0%
!! TCCTGGTTTTCCCGAGCTAA+AGG + chr8_2:69390989-69391008 Msa1265230:CDS 50.0%
CTTGTCAACACCACAGCGTA+AGG + chr8_2:69391199-69391218 Msa1265230:CDS 50.0%
CGTAAGGCTTCCGATGAACA+CGG + chr8_2:69391215-69391234 Msa1265230:CDS 50.0%
GTAAGGCTTCCGATGAACAC+GGG + chr8_2:69391216-69391235 Msa1265230:CDS 50.0%
TGCTAAGCACCCGTGTTCAT+CGG - chr8_2:69391228-69391247 None:intergenic 50.0%
ATGAACACGGGTGCTTAGCA+TGG + chr8_2:69391228-69391247 Msa1265230:CDS 50.0%
ATGCAGTGAGCTCATGAGGT+GGG - chr8_2:69391313-69391332 None:intergenic 50.0%
AATGCAGTGAGCTCATGAGG+TGG - chr8_2:69391314-69391333 None:intergenic 50.0%
ACCTCATGAGCTCACTGCAT+TGG + chr8_2:69391313-69391332 Msa1265230:CDS 50.0%
! TGCATTGGCAGAGTCCTTAG+AGG + chr8_2:69391328-69391347 Msa1265230:CDS 50.0%
GCAGAGTCCTTAGAGGAATG+TGG + chr8_2:69391335-69391354 Msa1265230:CDS 50.0%
TTCCTCAGGATCACCCCTAA+AGG - chr8_2:69391378-69391397 None:intergenic 50.0%
GTGTTGGAATGCATTGTCGG+TGG + chr8_2:69391524-69391543 Msa1265230:CDS 50.0%
CCCTCCTTTCTCACTTGACA+TGG - chr8_2:69391687-69391706 None:intergenic 50.0%
AACCATCGAACTTGGGAACC+CGG + chr8_2:69391931-69391950 Msa1265230:three_prime_UTR 50.0%
GGAGCAGCATGTGAGCCAAA+TGG - chr8_2:69388934-69388953 None:intergenic 55.0%
GGTTCACGTGGATTCCCAGA+AGG - chr8_2:69389120-69389139 None:intergenic 55.0%
GATGAAGCTGTGGCAGAGAC+AGG + chr8_2:69389189-69389208 Msa1265230:CDS 55.0%
!! GTTTGGTGCGGATCTTGCTG+AGG + chr8_2:69389251-69389270 Msa1265230:CDS 55.0%
TGGGTTCCTCTTTGGACTGC+AGG + chr8_2:69389288-69389307 Msa1265230:CDS 55.0%
GGGTTCCTCTTTGGACTGCA+GGG + chr8_2:69389289-69389308 Msa1265230:CDS 55.0%
GCACCGGATCCAAAGACTAC+CGG - chr8_2:69389816-69389835 None:intergenic 55.0%
CCCCGTGTCTTATAAGACCC+TGG - chr8_2:69390292-69390311 None:intergenic 55.0%
CGGGTCCCGCTTAAAAGTGA+GGG - chr8_2:69390327-69390346 None:intergenic 55.0%
! GCCTTTAGCTCGGGAAAACC+AGG - chr8_2:69390993-69391012 None:intergenic 55.0%
!! ATGGCAACTGCATTGGCTCG+TGG - chr8_2:69391095-69391114 None:intergenic 55.0%
TCATCGGAAGCCTTACGCTG+TGG - chr8_2:69391212-69391231 None:intergenic 55.0%
TGCAGTGAGCTCATGAGGTG+GGG - chr8_2:69391312-69391331 None:intergenic 55.0%
GCCAATGCAGTGAGCTCATG+AGG - chr8_2:69391317-69391336 None:intergenic 55.0%
! GTCCTTTAGGGGTGATCCTG+AGG + chr8_2:69391373-69391392 Msa1265230:CDS 55.0%
TGAGGCCCTGCAGTCCAAAG+AGG - chr8_2:69389297-69389316 None:intergenic 60.0%
GCGGGTCCCGCTTAAAAGTG+AGG - chr8_2:69390328-69390347 None:intergenic 60.0%
GCAGTGAGCTCATGAGGTGG+GGG - chr8_2:69391311-69391330 None:intergenic 60.0%
GACCGGGTTCCCAAGTTCGA+TGG - chr8_2:69391936-69391955 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 69388747 69392099 69388747 ID=Msa1265230;Name=Msa1265230
chr8_2 mRNA 69388747 69392099 69388747 ID=Msa1265230-mRNA-1;Parent=Msa1265230;Name=Msa1265230-mRNA-1;_AED=0.23;_eAED=0.23;_QI=121|1|1|1|1|1|2|189|485
chr8_2 exon 69388747 69389375 69388747 ID=Msa1265230-mRNA-1:exon:22952;Parent=Msa1265230-mRNA-1
chr8_2 exon 69390961 69392099 69390961 ID=Msa1265230-mRNA-1:exon:22953;Parent=Msa1265230-mRNA-1
chr8_2 five_prime_UTR 69388747 69388867 69388747 ID=Msa1265230-mRNA-1:five_prime_utr;Parent=Msa1265230-mRNA-1
chr8_2 CDS 69388868 69389375 69388868 ID=Msa1265230-mRNA-1:cds;Parent=Msa1265230-mRNA-1
chr8_2 CDS 69390961 69391910 69390961 ID=Msa1265230-mRNA-1:cds;Parent=Msa1265230-mRNA-1
chr8_2 three_prime_UTR 69391911 69392099 69391911 ID=Msa1265230-mRNA-1:three_prime_utr;Parent=Msa1265230-mRNA-1
Gene Sequence

>Msa1265230

ATGTCTAGCTTCAAAAATGAAATGAATGGTAACAACTTATTACATGTGGCTGTTTTGGCATTCCCATTTGGCTCACATGCTGCTCCACTCCTTAGCCTAGTGAAAAAAATTGCTATAGAGGCTCCTAAAGTTACATTTTCATTCTTCTGCACAACCACAACAAATGATACTTTATTTTCTAGGTCAAATGAGTTTCTTCCTAACATAAAGCATTATAATGTTCATGATGGATTGCCAGAAGGTTACGTACCTTCTGGGAATCCACGTGAACCAATTTTTCTCTTCATTAAGACCATGCAAGAGAACTTTAAGCATGTTATTGATGAAGCTGTGGCAGAGACAGGGAAGAACATTACTTGTTTGATTACTGACGCATTTTTTTGGTTTGGTGCGGATCTTGCTGAGGAAATGCATGCCAAATGGGTTCCTCTTTGGACTGCAGGGCCTCACTCTCTTCTTACACATGTTTACACAGATCTTATCAGAGAAAAGACTGGCTCCAAGGAAGTCCATGATGTCAAAAGTATCGATGTTCTTCCTGGTTTTCCCGAGCTAAAGGCTTCTGATTTGCCTGAGGGAGTAATAAAAGATATAGATGTACCATTTGCAACAATGTTACACAAAATGGGACTAGAGTTACCACGAGCCAATGCAGTTGCCATAAACTCATTTGCTTCAATACACCCTCTTATTGAGAATGAGTTAAATTCCAAGTTCAAATTGCTACTAAATGTTGGTCCATTCAACTTGTCAACACCACAGCGTAAGGCTTCCGATGAACACGGGTGCTTAGCATGGTTGAACCAACATGAGAATTCTTCAGTGGTGTATATAAGCTTTGGAAGTGTGGTAACACCCCCACCTCATGAGCTCACTGCATTGGCAGAGTCCTTAGAGGAATGTGGATTTCCATTTATTTGGTCCTTTAGGGGTGATCCTGAGGAAAAATTGCCAAAAGGGTTTTTGGAAAGGACAAAAACAAAAGGTAAAATTGTTGCATGGGCTCCTCAAGTTGAAATCCTTAAACACTCATCAGTTGGTGTGTTTTTGACTCATTCTGGGTGGAATTCTGTGTTGGAATGCATTGTCGGTGGTGTGCCAATGATTAGTAGACCTTTTTTCGGAGATCAAGGGTTGAATACAATACTTATAGAAAGTGTTTTGGAGATTGGTGTGGGTGTTGACAATGGAGTTTTGACTAAAGAATCTACTAAGAAAGCTTTGGAATTAACCATGTCAAGTGAGAAAGGAGGGATAATGCGCCAAAAGATTGTGAAACTCAAGGAGTCAGCATTCAAAGCTGTTGAACAAAATGGTACCTCTGCAATGGATTTCACTACTTTGATACAAATTGTCACTAGTAGAAGTTTTAAAAAATACATAAGGGTGTTCATGGGTACGAGAGCATCCAATCAACTCAATAACGCAACTCATCTGGAAATGTTTGGTTTGGTTTGA
Protein sequence

>Msa1265230

MSSFKNEMNGNNLLHVAVLAFPFGSHAAPLLSLVKKIAIEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKHYNVHDGLPEGYVPSGNPREPIFLFIKTMQENFKHVIDEAVAETGKNITCLITDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFASIHPLIENELNSKFKLLLNVGPFNLSTPQRKASDEHGCLAWLNQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPEEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILIESVLEIGVGVDNGVLTKESTKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTSRSFKKYIRVFMGTRASNQLNNATHLEMFGLV*