AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1338240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338240 MtrunA17_Chr5g0408181 99.138 464 4 0 1 464 1 464 0.0 952
Msa1338240 MtrunA17_Chr8g0369791 83.906 466 73 1 1 464 1 466 0.0 813
Msa1338240 MtrunA17_Chr4g0044851 58.295 434 172 5 35 461 37 468 0.0 537
Msa1338240 MtrunA17_Chr1g0153371 55.022 458 194 5 13 461 13 467 0.0 528
Msa1338240 MtrunA17_Chr4g0044841 56.552 435 179 5 35 461 38 470 1.59e-178 508
Msa1338240 MtrunA17_Chr1g0164371 56.129 465 190 8 8 460 11 473 5.41e-174 496
Msa1338240 MtrunA17_Chr2g0293411 35.227 440 263 9 35 454 41 478 4.50e-83 264
Msa1338240 MtrunA17_Chr6g0455461 35.000 460 277 9 5 456 12 457 5.17e-83 263
Msa1338240 MtrunA17_Chr3g0078411 34.565 460 279 9 5 456 12 457 5.43e-82 261
Msa1338240 MtrunA17_Chr7g0219961 34.339 431 271 7 35 458 33 458 4.57e-81 258
Msa1338240 MtrunA17_Chr3g0113321 33.032 442 275 9 33 458 27 463 4.66e-81 259
Msa1338240 MtrunA17_Chr2g0293421 34.783 437 266 8 35 454 45 479 5.10e-81 259
Msa1338240 MtrunA17_Chr5g0443401 32.983 476 288 11 13 463 8 477 1.53e-79 255
Msa1338240 MtrunA17_Chr7g0226771 34.382 477 284 14 3 462 5 469 1.58e-79 254
Msa1338240 MtrunA17_Chr5g0403931 33.891 478 286 12 4 458 5 475 3.67e-79 254
Msa1338240 MtrunA17_Chr3g0107511 33.475 472 291 10 12 463 9 477 2.36e-78 252
Msa1338240 MtrunA17_Chr8g0381571 33.481 451 278 8 4 434 12 460 1.44e-77 249
Msa1338240 MtrunA17_Chr8g0381541 33.481 451 278 8 4 434 12 460 3.80e-77 249
Msa1338240 MtrunA17_Chr3g0107501 33.260 457 283 9 26 463 24 477 1.37e-76 247
Msa1338240 MtrunA17_Chr8g0388921 33.958 480 291 12 3 464 7 478 1.15e-75 244
Msa1338240 MtrunA17_Chr8g0380471 31.950 482 305 13 1 464 1 477 3.92e-75 243
Msa1338240 MtrunA17_Chr8g0341951 31.250 448 288 10 7 438 6 449 2.55e-74 241
Msa1338240 MtrunA17_Chr5g0443731 33.703 451 271 11 35 464 29 472 5.67e-73 238
Msa1338240 MtrunA17_Chr5g0400421 33.708 445 262 11 35 454 45 481 1.45e-72 237
Msa1338240 MtrunA17_Chr5g0400411 36.530 438 258 10 35 454 45 480 1.92e-72 236
Msa1338240 MtrunA17_Chr5g0397971 29.596 446 293 9 6 435 3 443 1.30e-71 234
Msa1338240 MtrunA17_Chr8g0372411 32.054 443 276 9 36 460 40 475 2.56e-71 233
Msa1338240 MtrunA17_Chr3g0089361 30.909 440 281 10 35 458 40 472 5.60e-69 227
Msa1338240 MtrunA17_Chr8g0373441 34.204 421 255 11 1 405 1 415 5.21e-68 223
Msa1338240 MtrunA17_Chr8g0339861 32.604 457 278 15 1 434 8 457 1.01e-66 221
Msa1338240 MtrunA17_Chr6g0478161 30.342 468 300 12 13 460 26 487 5.40e-66 220
Msa1338240 MtrunA17_Chr3g0089351 31.407 398 256 9 70 458 1 390 7.65e-66 216
Msa1338240 MtrunA17_Chr8g0380931 30.222 450 283 12 35 461 62 503 1.48e-65 219
Msa1338240 MtrunA17_Chr3g0141801 30.290 449 282 8 35 460 41 481 6.35e-65 217
Msa1338240 MtrunA17_Chr8g0372711 30.508 472 306 9 4 460 18 482 2.73e-64 215
Msa1338240 MtrunA17_Chr8g0381551 29.861 288 183 6 29 297 37 324 2.55e-36 137
Msa1338240 MtrunA17_Chr5g0404861 42.138 159 86 3 307 462 3 158 2.01e-35 129
Msa1338240 MtrunA17_Chr1g0161671 27.491 291 185 7 29 297 23 309 3.67e-32 125
Msa1338240 MtrunA17_Chr6g0463551 34.807 181 104 2 190 359 12 189 1.01e-31 120
Msa1338240 MtrunA17_Chr8g0334891 26.846 447 273 17 22 433 25 452 1.07e-26 112
Msa1338240 MtrunA17_Chr6g0463541 44.340 106 59 0 355 460 2 107 1.53e-26 103
Msa1338240 MtrunA17_Chr8g0381561 48.077 104 53 1 332 434 8 111 1.70e-26 103
Msa1338240 MtrunA17_Chr8g0339331 27.130 446 264 15 36 429 40 476 3.10e-26 111
Msa1338240 MtrunA17_Chr8g0382901 24.138 464 299 16 6 437 1 443 4.03e-26 112
Msa1338240 MtrunA17_Chr8g0382901 22.374 438 298 13 35 437 492 922 3.66e-22 100
Msa1338240 MtrunA17_Chr5g0437001 44.860 107 55 1 327 429 1 107 4.09e-26 103
Msa1338240 MtrunA17_Chr4g0035921 23.950 476 300 12 14 437 16 481 7.60e-26 110
Msa1338240 MtrunA17_Chr1g0151221 24.295 461 279 12 37 433 41 495 2.83e-25 108
Msa1338240 MtrunA17_Chr3g0101631 25.364 481 298 17 1 437 1 464 3.78e-25 108
Msa1338240 MtrunA17_Chr2g0286091 24.686 478 305 16 25 460 33 497 5.06e-25 107
Msa1338240 MtrunA17_Chr5g0405001 24.686 478 306 16 9 441 18 486 8.88e-25 107
Msa1338240 MtrunA17_Chr5g0403321 25.806 465 281 14 24 437 23 474 3.37e-24 105
Msa1338240 MtrunA17_Chr2g0310381 23.223 422 279 11 35 418 28 442 3.39e-24 105
Msa1338240 MtrunA17_Chr3g0101621 25.523 478 300 16 3 440 1 462 6.17e-24 104
Msa1338240 MtrunA17_Chr8g0334941 29.434 265 156 9 191 433 42 297 1.03e-23 101
Msa1338240 MtrunA17_Chr1g0162811 24.262 474 309 13 13 443 8 474 1.38e-23 103
Msa1338240 MtrunA17_Chr4g0000161 26.266 316 208 7 1 292 1 315 1.41e-23 101
Msa1338240 MtrunA17_Chr2g0310391 22.658 459 292 14 5 418 2 442 1.87e-23 102
Msa1338240 MtrunA17_Chr3g0101601 24.528 477 306 13 3 437 1 465 2.74e-23 102
Msa1338240 MtrunA17_Chr6g0458561 24.464 466 291 15 12 426 31 486 5.28e-23 101
Msa1338240 MtrunA17_Chr4g0000151 39.669 121 71 2 333 452 12 131 7.13e-23 94.4
Msa1338240 MtrunA17_Chr3g0116681 24.034 466 299 16 13 437 20 471 8.75e-23 100
Msa1338240 MtrunA17_Chr5g0431511 26.432 454 276 16 35 441 33 475 1.06e-22 100
Msa1338240 MtrunA17_Chr3g0135841 23.028 469 280 13 37 433 44 503 1.13e-22 100
Msa1338240 MtrunA17_Chr8g0372251 23.543 429 276 10 30 414 30 450 1.58e-22 100
Msa1338240 MtrunA17_Chr4g0000171 24.845 322 205 11 1 292 1 315 2.32e-22 97.8
Msa1338240 MtrunA17_Chr4g0013471 27.719 285 179 11 29 292 37 315 3.02e-22 98.6
Msa1338240 MtrunA17_Chr5g0445421 23.542 463 295 15 6 437 87 521 3.20e-22 99.8
Msa1338240 MtrunA17_Chr5g0445381 23.881 469 307 14 13 442 48 505 8.52e-22 98.2
Msa1338240 MtrunA17_Chr5g0404881 28.829 222 147 5 11 222 9 229 1.03e-21 94.0
Msa1338240 MtrunA17_Chr6g0451681 25.056 447 281 14 1 433 32 438 2.80e-21 96.3
Msa1338240 MtrunA17_Chr5g0436981 32.394 142 90 3 28 163 21 162 2.97e-21 91.3
Msa1338240 MtrunA17_Chr8g0346261 24.664 446 291 16 37 445 86 523 3.10e-21 96.7
Msa1338240 MtrunA17_Chr6g0451781 24.348 460 274 15 27 427 68 512 5.30e-21 95.9
Msa1338240 MtrunA17_Chr6g0451641 24.145 468 278 20 7 414 13 463 6.58e-21 95.5
Msa1338240 MtrunA17_Chr1g0162801 22.951 488 308 13 6 443 8 477 7.93e-21 95.1
Msa1338240 MtrunA17_Chr6g0457421 25.858 379 240 14 114 462 139 506 1.46e-20 94.4
Msa1338240 MtrunA17_Chr1g0160851 25.306 490 282 17 9 439 3 467 1.96e-20 94.0
Msa1338240 MtrunA17_Chr8g0362731 23.404 376 247 9 97 440 18 384 2.10e-20 93.2
Msa1338240 MtrunA17_Chr4g0004601 23.155 393 261 10 81 440 123 507 2.68e-20 93.6
Msa1338240 MtrunA17_Chr3g0082701 23.992 471 288 19 4 414 11 471 2.79e-20 93.6
Msa1338240 MtrunA17_Chr3g0101571 24.587 484 301 16 1 437 1 467 3.01e-20 93.2
Msa1338240 MtrunA17_Chr8g0336361 22.323 439 278 12 65 440 96 534 3.39e-20 93.6
Msa1338240 MtrunA17_Chr1g0198191 24.512 461 280 19 28 436 40 484 5.68e-20 92.4
Msa1338240 MtrunA17_Chr5g0431501 25.835 449 285 14 35 441 33 475 6.13e-20 92.4
Msa1338240 MtrunA17_Chr5g0431461 25.835 449 285 14 35 441 33 475 6.13e-20 92.4
Msa1338240 MtrunA17_Chr7g0215181 28.409 264 162 10 216 462 255 508 1.16e-19 91.7
Msa1338240 MtrunA17_Chr3g0089291 26.522 230 158 7 70 291 1 227 1.48e-19 87.4
Msa1338240 MtrunA17_Chr5g0445461 23.222 478 314 17 6 446 13 474 2.67e-19 90.5
Msa1338240 MtrunA17_Chr1g0161641 48.684 76 38 1 360 434 13 88 3.69e-19 82.0
Msa1338240 MtrunA17_Chr6g0466901 27.273 473 263 25 9 418 13 467 3.85e-19 90.1
Msa1338240 MtrunA17_Chr5g0445441 23.077 468 316 14 13 446 58 515 3.85e-19 90.1
Msa1338240 MtrunA17_Chr1g0205361 25.153 489 280 20 5 439 11 467 4.08e-19 89.7
Msa1338240 MtrunA17_Chr1g0174481 23.061 490 319 15 15 453 6 488 4.15e-19 89.7
Msa1338240 MtrunA17_Chr5g0403351 23.382 479 301 17 12 437 6 471 4.21e-19 89.7
Msa1338240 MtrunA17_Chr6g0466331 23.237 482 314 16 6 442 5 475 5.66e-19 89.4
Msa1338240 MtrunA17_Chr4g0076161 24.754 509 317 18 1 456 1 496 5.95e-19 89.4
Msa1338240 MtrunA17_Chr7g0235551 23.868 486 301 15 13 442 9 481 6.52e-19 89.4
Msa1338240 MtrunA17_Chr4g0052861 24.043 470 299 15 7 435 7 459 7.59e-19 89.0
Msa1338240 MtrunA17_Chr5g0445451 22.785 474 306 15 6 437 13 468 1.04e-18 88.6
Msa1338240 MtrunA17_Chr0c19g0493771 28.877 187 119 3 258 437 441 620 1.36e-18 89.0
Msa1338240 MtrunA17_Chr3g0101611 23.736 455 283 17 35 441 38 476 1.48e-18 88.2
Msa1338240 MtrunA17_Chr4g0030701 23.605 466 286 13 28 437 29 480 1.50e-18 88.2
Msa1338240 MtrunA17_Chr4g0046631 26.009 446 267 20 36 427 46 482 1.67e-18 88.2
Msa1338240 MtrunA17_Chr6g0451691 24.330 485 288 19 13 433 20 489 2.78e-18 87.4
Msa1338240 MtrunA17_Chr3g0089381 27.119 177 119 4 189 359 20 192 3.56e-18 83.2
Msa1338240 MtrunA17_Chr8g0364651 22.363 474 302 16 13 435 8 466 3.90e-18 87.0
Msa1338240 MtrunA17_Chr4g0024771 21.231 471 319 14 7 437 10 468 4.24e-18 86.7
Msa1338240 MtrunA17_Chr7g0258221 22.083 480 318 14 13 444 9 480 4.57e-18 86.7
Msa1338240 MtrunA17_Chr2g0280121 27.686 242 154 5 216 437 240 480 5.26e-18 86.7
Msa1338240 MtrunA17_Chr7g0235261 22.816 412 271 11 65 440 86 486 6.47e-18 86.3
Msa1338240 MtrunA17_Chr4g0011961 24.632 475 299 19 7 437 4 463 8.16e-18 85.9
Msa1338240 MtrunA17_Chr7g0265611 22.979 470 304 16 14 438 30 486 9.78e-18 85.9
Msa1338240 MtrunA17_Chr4g0058201 22.517 453 297 13 35 445 28 468 9.83e-18 85.5
Msa1338240 MtrunA17_Chr1g0205371 24.033 491 288 18 9 439 3 468 1.06e-17 85.5
Msa1338240 MtrunA17_Chr4g0074581 23.778 450 287 17 35 435 69 511 1.12e-17 85.5
Msa1338240 MtrunA17_Chr6g0466941 25.054 467 274 22 9 414 13 464 1.15e-17 85.5
Msa1338240 MtrunA17_Chr5g0395321 32.212 208 124 6 246 445 272 470 1.25e-17 85.5
Msa1338240 MtrunA17_Chr5g0395381 31.343 201 124 5 246 438 247 441 1.47e-17 85.1
Msa1338240 MtrunA17_Chr5g0401681 23.013 478 303 15 7 439 6 463 1.66e-17 84.7
Msa1338240 MtrunA17_Chr1g0174441 22.222 495 316 17 16 453 33 515 1.73e-17 85.1
Msa1338240 MtrunA17_Chr5g0431641 23.093 472 316 16 9 442 12 474 1.74e-17 84.7
Msa1338240 MtrunA17_Chr5g0401691 24.590 488 311 19 9 452 25 499 2.48e-17 84.3
Msa1338240 MtrunA17_Chr7g0218611 22.851 442 292 11 35 435 33 466 2.58e-17 84.3
Msa1338240 MtrunA17_Chr2g0280071 22.268 485 298 14 12 437 43 507 2.78e-17 84.7
Msa1338240 MtrunA17_Chr8g0387101 25.627 359 224 10 108 437 132 476 2.80e-17 84.3
Msa1338240 MtrunA17_Chr4g0011901 23.318 446 287 15 36 437 30 464 4.48e-17 83.6
Msa1338240 MtrunA17_Chr1g0174451 22.727 484 304 15 13 440 10 479 4.58e-17 83.6
Msa1338240 MtrunA17_Chr5g0446151 23.982 442 284 14 35 437 41 469 5.47e-17 83.2
Msa1338240 MtrunA17_Chr6g0463801 24.222 450 295 12 24 437 26 465 6.72e-17 83.2
Msa1338240 MtrunA17_Chr1g0156061 23.944 426 254 12 36 437 56 435 8.01e-17 82.8
Msa1338240 MtrunA17_Chr1g0200961 22.374 514 327 15 1 460 2 497 9.67e-17 82.4
Msa1338240 MtrunA17_Chr7g0218601 23.146 445 289 13 35 437 34 467 1.11e-16 82.4
Msa1338240 MtrunA17_Chr3g0128461 26.210 248 158 7 225 456 279 517 1.64e-16 82.0
Msa1338240 MtrunA17_Chr1g0156101 23.568 454 288 14 36 437 33 479 2.03e-16 81.6
Msa1338240 MtrunA17_Chr5g0395331 29.130 230 142 6 225 439 251 474 2.26e-16 81.3
Msa1338240 MtrunA17_Chr2g0280011 31.214 173 110 3 273 437 11 182 2.41e-16 77.8
Msa1338240 MtrunA17_Chr4g0052881 23.909 481 297 15 3 435 1 460 2.71e-16 81.3
Msa1338240 MtrunA17_Chr3g0101821 21.206 481 333 14 3 443 1 475 2.93e-16 81.3
Msa1338240 MtrunA17_Chr3g0086651 26.740 273 164 8 218 463 241 504 3.02e-16 81.3
Msa1338240 MtrunA17_Chr1g0167321 23.404 470 314 14 12 441 10 473 4.00e-16 80.5
Msa1338240 MtrunA17_Chr4g0061381 24.723 271 170 8 218 463 240 501 4.03e-16 80.5
Msa1338240 MtrunA17_Chr3g0086661 27.106 273 163 8 218 463 241 504 4.90e-16 80.5
Msa1338240 MtrunA17_Chr5g0403331 23.651 482 313 17 1 437 1 472 5.13e-16 80.5
Msa1338240 MtrunA17_Chr3g0101701 22.149 456 286 14 35 439 38 475 5.86e-16 80.1
Msa1338240 MtrunA17_Chr8g0354531 23.451 452 283 18 56 461 209 643 6.34e-16 80.5
Msa1338240 MtrunA17_Chr6g0484841 23.418 474 286 18 36 459 38 484 6.77e-16 80.1
Msa1338240 MtrunA17_Chr5g0431671 22.566 452 298 17 32 442 35 475 7.08e-16 79.7
Msa1338240 MtrunA17_Chr6g0451811 32.484 157 90 4 267 414 2 151 9.32e-16 76.3
Msa1338240 MtrunA17_Chr4g0046331 22.581 496 321 15 5 447 1 486 9.48e-16 79.7
Msa1338240 MtrunA17_Chr4g0058191 22.774 483 313 16 6 445 1 466 1.00e-15 79.3
Msa1338240 MtrunA17_Chr4g0046351 22.436 468 306 14 30 450 30 487 1.07e-15 79.3
Msa1338240 MtrunA17_Chr1g0164211 23.516 455 287 16 30 439 26 464 1.12e-15 79.3
Msa1338240 MtrunA17_Chr1g0161651 23.571 280 162 5 29 256 37 316 1.26e-15 77.8
Msa1338240 MtrunA17_Chr3g0101801 23.454 469 308 17 9 437 19 476 1.40e-15 79.0
Msa1338240 MtrunA17_Chr5g0413911 24.017 483 286 19 22 437 31 499 1.54e-15 79.0
Msa1338240 MtrunA17_Chr1g0174431 26.829 205 129 3 273 462 4 202 1.55e-15 75.5
Msa1338240 MtrunA17_Chr4g0053621 23.480 477 304 17 6 435 1 463 1.61e-15 79.0
Msa1338240 MtrunA17_Chr5g0409051 19.517 497 317 14 6 438 3 480 1.98e-15 78.6
Msa1338240 MtrunA17_Chr8g0362481 25.806 217 141 4 237 439 198 408 2.14e-15 78.2
Msa1338240 MtrunA17_Chr4g0011881 23.789 454 296 15 26 437 19 464 2.22e-15 78.2
Msa1338240 MtrunA17_Chr5g0396521 27.234 235 128 6 258 456 336 563 2.28e-15 78.6
Msa1338240 MtrunA17_Chr1g0160861 26.016 246 154 7 212 439 73 308 2.64e-15 77.0
Msa1338240 MtrunA17_Chr2g0313831 24.812 399 238 15 79 430 103 486 2.90e-15 78.2
Msa1338240 MtrunA17_Chr3g0101661 22.314 484 306 17 12 439 5 474 2.90e-15 78.2
Msa1338240 MtrunA17_Chr5g0445531 22.348 443 302 14 35 442 38 473 2.96e-15 77.8
Msa1338240 MtrunA17_Chr2g0280081 27.273 242 154 6 221 441 740 980 3.73e-15 78.2
Msa1338240 MtrunA17_Chr4g0011921 25.106 470 304 17 9 437 2 464 4.42e-15 77.4
Msa1338240 MtrunA17_Chr8g0339311 23.400 500 311 22 24 463 34 521 4.45e-15 77.4
Msa1338240 MtrunA17_Chr4g0063221 23.820 445 278 15 59 458 86 514 4.74e-15 77.4
Msa1338240 MtrunA17_Chr4g0052851 22.838 451 297 11 19 435 17 450 4.97e-15 77.4
Msa1338240 MtrunA17_Chr2g0296661 23.653 427 263 13 60 438 56 467 5.56e-15 77.0
Msa1338240 MtrunA17_Chr4g0046681 29.825 171 102 4 269 427 30 194 5.85e-15 74.3
Msa1338240 MtrunA17_Chr4g0008101 28.311 219 129 8 218 414 258 470 6.16e-15 77.0
Msa1338240 MtrunA17_Chr2g0280061 30.636 173 111 3 273 437 11 182 8.15e-15 73.6
Msa1338240 MtrunA17_Chr4g0039901 23.077 455 290 17 32 441 32 471 8.26e-15 76.6
Msa1338240 MtrunA17_Chr4g0030711 24.219 256 159 4 218 444 241 490 8.30e-15 76.6
Msa1338240 MtrunA17_Chr8g0344191 20.998 481 327 14 1 437 35 506 9.20e-15 76.6
Msa1338240 MtrunA17_Chr8g0356001 24.123 456 281 16 35 442 41 479 9.97e-15 76.3
Msa1338240 MtrunA17_Chr3g0101691 22.131 488 314 16 1 437 1 473 1.07e-14 76.3
Msa1338240 MtrunA17_Chr4g0026941 28.352 261 161 8 218 463 290 539 1.24e-14 76.3
Msa1338240 MtrunA17_Chr4g0058281 22.268 485 315 16 9 445 19 489 1.45e-14 75.9
Msa1338240 MtrunA17_Chr4g0058211 26.923 182 121 3 270 445 19 194 1.80e-14 72.4
Msa1338240 MtrunA17_Chr1g0207841 25.911 247 150 5 218 437 242 482 2.05e-14 75.5
Msa1338240 MtrunA17_Chr2g0314731 27.468 233 147 6 236 452 254 480 2.69e-14 75.1
Msa1338240 MtrunA17_Chr4g0039391 22.727 418 267 14 67 439 66 472 2.90e-14 74.7
Msa1338240 MtrunA17_Chr2g0296651 22.680 485 291 17 6 435 4 459 3.13e-14 74.7
Msa1338240 MtrunA17_Chr5g0430081 21.477 447 294 14 36 437 36 470 3.29e-14 74.7
Msa1338240 MtrunA17_Chr1g0179811 22.551 439 291 14 64 460 105 536 3.90e-14 74.7
Msa1338240 MtrunA17_Chr6g0463561 28.249 177 119 5 3 171 4 180 3.96e-14 70.9
Msa1338240 MtrunA17_Chr5g0419691 23.736 455 288 19 27 437 25 464 4.43e-14 74.3
Msa1338240 MtrunA17_Chr1g0203151 26.316 266 163 9 218 462 257 510 4.67e-14 74.3
Msa1338240 MtrunA17_Chr5g0436991 27.778 126 88 1 170 292 22 147 4.68e-14 69.7
Msa1338240 MtrunA17_Chr5g0430031 20.993 443 301 14 36 437 38 472 4.72e-14 74.3
Msa1338240 MtrunA17_Chr2g0310351 26.946 167 110 3 270 430 1 161 4.84e-14 70.9
Msa1338240 MtrunA17_Chr5g0430131 21.548 478 318 16 4 437 7 471 5.22e-14 73.9
Msa1338240 MtrunA17_Chr5g0400391 41.250 80 46 1 378 456 2 81 6.27e-14 67.8
Msa1338240 MtrunA17_Chr2g0280261 23.747 459 299 15 24 447 23 465 1.25e-13 72.8
Msa1338240 MtrunA17_Chr8g0344151 21.915 470 311 16 15 437 12 472 1.66e-13 72.4
Msa1338240 MtrunA17_Chr1g0203141 25.660 265 166 9 218 462 261 514 1.80e-13 72.4
Msa1338240 MtrunA17_Chr8g0362701 25.688 218 140 5 237 439 267 477 1.87e-13 72.4
Msa1338240 MtrunA17_Chr3g0101651 21.381 449 298 15 35 439 38 475 2.10e-13 72.4
Msa1338240 MtrunA17_Chr1g0156081 22.747 466 293 15 28 437 49 503 3.17e-13 71.6
Msa1338240 MtrunA17_Chr2g0313751 22.145 429 268 12 43 430 110 513 3.53e-13 71.6
Msa1338240 MtrunA17_Chr4g0011941 28.977 176 109 4 270 437 1 168 4.30e-13 68.2
Msa1338240 MtrunA17_Chr8g0351401 25.275 273 178 10 209 463 246 510 4.43e-13 71.2
Msa1338240 MtrunA17_Chr7g0248991 30.147 136 88 1 258 393 223 351 8.88e-13 69.7
Msa1338240 MtrunA17_Chr4g0011851 28.977 176 113 3 268 437 14 183 9.75e-13 67.4
Msa1338240 MtrunA17_Chr2g0313821 22.619 420 271 14 56 433 78 485 1.41e-12 69.7
Msa1338240 MtrunA17_Chr4g0038271 25.818 275 170 9 218 463 291 560 2.13e-12 69.3
Msa1338240 MtrunA17_Chr2g0314781 28.144 167 108 3 292 452 7 167 2.21e-12 65.5
Msa1338240 MtrunA17_Chr2g0307291 22.917 432 261 16 43 430 85 488 2.47e-12 68.9
Msa1338240 MtrunA17_Chr1g0184461 27.228 202 123 6 246 434 282 472 2.50e-12 68.9
Msa1338240 MtrunA17_Chr5g0406651 29.082 196 123 4 252 437 276 465 2.74e-12 68.6
Msa1338240 MtrunA17_Chr7g0258211 22.464 276 179 6 215 462 238 506 2.93e-12 68.6
Msa1338240 MtrunA17_Chr7g0246221 23.770 244 162 7 212 437 234 471 2.98e-12 68.6
Msa1338240 MtrunA17_Chr5g0430101 21.895 475 314 20 10 437 5 469 3.03e-12 68.6
Msa1338240 MtrunA17_Chr8g0357431 22.316 475 308 15 9 437 11 470 3.55e-12 68.6
Msa1338240 MtrunA17_Chr5g0446101 23.492 315 190 9 173 459 2 293 4.28e-12 67.0
Msa1338240 MtrunA17_Chr1g0161661 45.000 60 32 1 379 437 15 74 4.87e-12 62.4
Msa1338240 MtrunA17_Chr2g0313761 21.860 430 268 12 43 430 78 481 6.21e-12 67.8
Msa1338240 MtrunA17_Chr1g0174471 22.609 230 154 4 220 439 278 493 7.26e-12 67.4
Msa1338240 MtrunA17_Chr5g0430091 21.064 451 291 13 36 437 38 472 7.92e-12 67.4
Msa1338240 MtrunA17_Chr7g0246181 25.620 242 158 7 212 437 235 470 1.37e-11 66.6
Msa1338240 MtrunA17_Chr2g0313771 21.374 393 255 13 81 433 114 492 1.58e-11 66.2
Msa1338240 MtrunA17_Chr8g0354511 23.721 430 266 18 77 461 110 522 1.68e-11 66.2
Msa1338240 MtrunA17_Chr4g0017411 25.118 211 151 2 226 435 243 447 1.87e-11 66.2
Msa1338240 MtrunA17_Chr4g0011981 22.697 445 291 14 36 437 30 464 2.02e-11 65.9
Msa1338240 MtrunA17_Chr7g0224551 22.709 251 170 4 214 447 237 480 2.14e-11 65.9
Msa1338240 MtrunA17_Chr7g0260831 23.775 408 245 17 76 434 80 470 2.83e-11 65.5
Msa1338240 MtrunA17_Chr7g0262111 25.815 399 258 13 67 437 90 478 3.06e-11 65.5
Msa1338240 MtrunA17_Chr4g0046661 29.834 181 109 4 259 427 14 188 3.83e-11 63.2
Msa1338240 MtrunA17_Chr2g0313801 22.901 393 253 13 79 430 103 486 4.13e-11 65.1
Msa1338240 MtrunA17_Chr1g0184421 22.788 452 268 19 42 434 43 472 4.40e-11 65.1
Msa1338240 MtrunA17_Chr3g0101831 21.639 476 321 14 9 443 12 476 5.43e-11 64.7
Msa1338240 MtrunA17_Chr8g0354571 23.934 422 271 18 79 461 112 522 7.46e-11 64.3
Msa1338240 MtrunA17_Chr2g0280041 25.630 238 156 5 220 437 270 506 9.22e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338240 AT4G19230.1 75.166 451 104 3 18 463 15 462 0.0 717
Msa1338240 AT5G45340.1 73.961 457 115 2 5 460 6 459 0.0 716
Msa1338240 AT4G19230.2 71.179 458 118 5 12 458 4 458 0.0 674
Msa1338240 AT5G45340.2 74.246 431 107 3 5 434 6 433 0.0 672
Msa1338240 AT3G19270.2 58.590 454 179 6 13 460 13 463 0.0 550
Msa1338240 AT2G29090.2 60.633 442 163 6 29 462 43 481 0.0 535
Msa1338240 AT2G29090.1 60.633 442 163 6 29 462 43 481 0.0 535
Msa1338240 AT3G19270.1 58.275 429 170 6 13 435 13 438 0.0 514
Msa1338240 AT2G29090.3 60.154 389 144 6 82 462 1 386 9.45e-160 457
Msa1338240 AT2G29090.4 56.115 278 115 4 29 299 43 320 5.30e-99 301
Msa1338240 AT2G32440.2 36.422 464 268 12 13 454 20 478 3.57e-88 278
Msa1338240 AT2G32440.1 36.422 464 268 12 13 454 20 478 3.57e-88 278
Msa1338240 AT1G05160.2 34.100 478 279 12 3 454 14 481 4.79e-87 275
Msa1338240 AT1G05160.1 34.100 478 279 12 3 454 14 481 4.79e-87 275
Msa1338240 AT5G05690.1 35.388 438 264 9 35 458 31 463 3.46e-85 270
Msa1338240 AT5G36110.1 34.152 448 271 10 35 463 34 476 7.30e-76 245
Msa1338240 AT3G50660.1 32.211 475 265 11 35 458 39 507 1.46e-73 241
Msa1338240 AT5G05690.2 35.135 370 226 6 35 394 31 396 3.38e-71 231
Msa1338240 AT1G19630.1 33.482 448 274 10 29 458 29 470 6.86e-71 233
Msa1338240 AT5G38970.1 32.518 409 264 7 35 435 34 438 7.45e-71 232
Msa1338240 AT2G42850.1 31.839 446 280 11 35 463 45 483 1.94e-70 231
Msa1338240 AT1G12740.1 30.804 448 285 11 35 464 31 471 3.10e-70 231
Msa1338240 AT3G30180.1 31.403 449 279 11 3 439 11 442 2.87e-68 225
Msa1338240 AT1G12740.2 30.617 454 284 12 35 464 31 477 3.00e-68 226
Msa1338240 AT1G19630.3 33.962 424 257 10 29 435 29 446 9.77e-68 223
Msa1338240 AT1G12740.4 30.396 454 285 12 35 464 31 477 1.43e-67 224
Msa1338240 AT3G13730.1 32.373 451 277 12 28 458 44 486 1.87e-66 221
Msa1338240 AT4G36380.1 32.000 425 264 9 35 438 69 489 1.16e-65 220
Msa1338240 AT1G73340.1 29.583 480 300 12 6 460 11 477 2.30e-64 216
Msa1338240 AT3G13730.2 32.243 428 264 11 27 434 43 464 4.44e-64 214
Msa1338240 AT5G14400.2 32.215 447 251 15 40 464 1 417 1.02e-61 207
Msa1338240 AT5G14400.3 32.289 415 236 12 40 435 1 389 7.15e-59 198
Msa1338240 AT5G38970.3 31.781 365 239 6 35 393 34 394 7.28e-59 199
Msa1338240 AT3G50660.2 31.421 401 234 9 35 398 39 435 2.38e-58 199
Msa1338240 AT4G15300.3 29.186 442 287 11 14 438 4 436 8.71e-58 197
Msa1338240 AT4G15300.2 28.571 455 298 12 1 438 2 446 9.59e-58 198
Msa1338240 AT5G05690.3 33.621 348 217 7 120 458 2 344 1.12e-57 194
Msa1338240 AT3G44970.1 29.425 452 290 12 35 464 35 479 9.77e-56 192
Msa1338240 AT1G19630.2 32.474 388 238 10 29 399 29 409 6.50e-55 189
Msa1338240 AT1G65670.1 28.062 449 304 11 1 438 2 442 4.04e-54 188
Msa1338240 AT1G55940.2 29.577 426 274 13 35 437 45 467 6.37e-54 188
Msa1338240 AT1G55940.1 28.442 443 291 13 14 433 24 463 3.72e-53 186
Msa1338240 AT5G48000.2 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.4 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.7 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.6 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.5 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.3 28.251 446 293 13 35 460 35 473 1.52e-51 181
Msa1338240 AT5G48000.1 28.251 446 293 13 35 460 76 514 4.53e-51 181
Msa1338240 AT4G15300.1 27.586 464 288 12 14 438 4 458 7.93e-51 180
Msa1338240 AT4G15393.2 26.652 454 314 12 14 454 14 461 3.83e-50 177
Msa1338240 AT5G38970.2 29.692 357 240 6 87 435 4 357 9.84e-50 174
Msa1338240 AT5G38970.4 29.692 357 240 6 87 435 4 357 9.84e-50 174
Msa1338240 AT4G15396.1 27.460 437 292 13 35 454 35 463 1.00e-49 176
Msa1338240 AT5G14400.1 31.633 392 220 14 91 464 2 363 3.60e-48 169
Msa1338240 AT4G15396.3 27.818 417 276 13 35 434 35 443 2.32e-47 170
Msa1338240 AT5G36110.2 33.048 351 213 8 35 368 34 379 7.10e-47 167
Msa1338240 AT1G12740.3 28.446 341 225 8 35 361 31 366 9.30e-46 163
Msa1338240 AT1G78490.1 26.424 439 265 14 35 437 35 451 1.01e-45 166
Msa1338240 AT4G15310.1 28.979 421 275 13 35 438 36 449 1.29e-43 160
Msa1338240 AT4G15396.2 26.316 437 276 13 35 454 35 442 1.30e-42 157
Msa1338240 AT2G42850.2 29.231 390 237 13 5 368 12 388 2.13e-42 155
Msa1338240 AT3G30290.1 28.125 352 233 8 101 439 33 377 2.31e-41 152
Msa1338240 AT5G14400.4 31.065 338 207 10 40 359 1 330 9.73e-41 149
Msa1338240 AT4G15393.1 26.087 391 275 10 14 395 14 399 6.69e-38 142
Msa1338240 AT4G15396.4 26.738 374 254 11 35 395 35 401 4.10e-37 140
Msa1338240 AT4G36380.2 28.655 342 223 8 35 359 69 406 1.03e-36 140
Msa1338240 AT1G78490.2 25.635 394 238 13 35 395 35 406 2.93e-35 135
Msa1338240 AT4G15393.3 26.031 388 246 10 14 395 14 366 4.72e-33 129
Msa1338240 AT5G36140.1 29.181 281 183 7 35 301 33 311 8.47e-32 124
Msa1338240 AT5G36130.1 40.288 139 81 2 327 463 1 139 2.01e-31 118
Msa1338240 AT3G26300.1 24.681 470 307 13 12 441 8 470 3.77e-25 108
Msa1338240 AT3G44970.2 25.378 331 224 9 35 348 35 359 2.98e-24 104
Msa1338240 AT5G04330.1 25.053 471 267 19 34 442 31 477 1.70e-23 103
Msa1338240 AT2G25160.1 24.644 491 294 20 3 433 1 475 4.61e-23 102
Msa1338240 AT5G57220.1 23.799 458 296 14 14 435 12 452 4.82e-23 102
Msa1338240 AT2G26170.1 22.857 455 292 11 37 438 47 495 6.63e-23 102
Msa1338240 AT3G20940.1 22.318 466 312 12 19 441 26 484 1.17e-22 101
Msa1338240 AT5G25120.1 24.211 475 296 15 12 437 2 461 1.43e-22 100
Msa1338240 AT2G26710.1 23.918 439 282 13 59 459 87 511 1.94e-22 100
Msa1338240 AT3G10560.1 23.505 485 304 16 5 435 9 480 2.96e-22 99.8
Msa1338240 AT1G11680.1 23.454 469 290 19 6 433 14 454 4.35e-22 99.4
Msa1338240 AT3G20950.1 23.505 485 310 17 5 441 16 487 1.01e-21 98.2
Msa1338240 AT1G13080.1 26.446 484 301 17 3 441 1 474 1.16e-21 98.2
Msa1338240 AT2G46960.2 26.577 444 265 18 64 462 89 516 1.32e-21 97.8
Msa1338240 AT3G26310.1 23.760 484 306 16 15 448 9 479 1.50e-21 97.8
Msa1338240 AT1G11600.1 23.625 491 306 19 1 435 1 478 1.57e-21 97.8
Msa1338240 AT3G20110.1 23.567 471 316 15 5 441 13 473 5.21e-21 96.3
Msa1338240 AT5G25140.1 25.690 471 287 16 15 437 6 461 6.09e-21 95.9
Msa1338240 AT5G25180.1 24.717 441 286 14 35 437 29 461 1.18e-20 95.1
Msa1338240 AT5G52400.1 25.172 437 281 13 60 462 94 518 1.23e-20 95.1
Msa1338240 AT4G36220.1 23.651 482 309 13 10 441 16 488 2.26e-20 94.4
Msa1338240 AT4G31500.1 23.504 468 287 15 22 437 18 466 2.30e-20 94.0
Msa1338240 AT4G37370.1 23.567 471 314 14 12 447 9 468 2.41e-20 94.0
Msa1338240 AT3G26270.1 24.779 452 289 17 28 437 28 470 2.71e-20 94.0
Msa1338240 AT2G30750.1 26.608 451 280 16 35 445 33 472 4.01e-20 93.2
Msa1338240 AT2G46960.1 28.395 324 190 14 168 462 90 400 7.58e-20 91.7
Msa1338240 AT5G57260.1 23.179 453 298 13 28 437 23 468 7.67e-20 92.4
Msa1338240 AT4G37430.1 23.739 476 300 18 13 439 5 466 1.19e-19 92.0
Msa1338240 AT2G34490.1 23.663 486 314 19 16 460 20 489 1.22e-19 92.0
Msa1338240 AT1G64930.1 26.452 465 272 19 33 439 30 482 1.64e-19 91.7
Msa1338240 AT4G13770.1 25.607 453 269 19 16 418 14 448 2.86e-19 90.9
Msa1338240 AT3G61880.1 23.400 453 296 14 24 435 55 497 3.58e-19 90.5
Msa1338240 AT3G61880.2 23.400 453 296 14 24 435 55 497 4.67e-19 90.5
Msa1338240 AT5G25130.1 32.461 191 116 5 258 441 282 466 4.90e-19 90.1
Msa1338240 AT5G09970.1 23.767 446 293 17 37 441 71 510 5.51e-19 90.1
Msa1338240 AT4G37400.1 25.071 351 214 12 121 435 121 458 8.52e-19 89.4
Msa1338240 AT2G26170.2 22.751 378 237 8 111 438 40 412 1.02e-18 88.6
Msa1338240 AT3G26160.1 25.111 450 280 16 16 414 3 446 1.30e-18 88.6
Msa1338240 AT5G04630.1 23.503 451 285 15 35 436 38 477 1.74e-18 88.6
Msa1338240 AT5G67310.1 24.887 442 276 16 35 435 42 468 2.02e-18 88.2
Msa1338240 AT5G47990.1 22.717 427 275 15 66 447 73 489 2.22e-18 88.2
Msa1338240 AT1G11610.2 24.670 454 285 13 35 445 33 472 2.24e-18 88.2
Msa1338240 AT1G11610.1 24.289 457 283 13 35 445 33 472 2.31e-18 87.8
Msa1338240 AT2G34500.1 23.387 496 332 16 1 460 1 484 3.64e-18 87.4
Msa1338240 AT3G26290.1 23.841 453 286 14 29 437 28 465 5.86e-18 86.7
Msa1338240 AT3G26280.1 24.498 498 314 20 13 462 15 498 6.05e-18 86.7
Msa1338240 AT3G26290.2 23.841 453 286 14 29 437 41 478 6.69e-18 86.7
Msa1338240 AT4G31940.1 25.767 489 285 23 1 425 1 475 6.98e-18 86.7
Msa1338240 AT3G26280.2 24.498 498 314 20 13 462 32 515 6.98e-18 86.7
Msa1338240 AT4G31970.1 24.846 487 291 23 1 425 1 474 1.23e-17 85.9
Msa1338240 AT3G26180.1 24.473 474 305 17 7 437 6 469 1.52e-17 85.5
Msa1338240 AT3G25180.1 24.750 501 320 21 12 463 14 506 1.53e-17 85.5
Msa1338240 AT3G26230.1 25.678 479 300 16 3 437 1 467 2.02e-17 85.1
Msa1338240 AT2G27010.1 20.872 436 293 13 66 462 66 488 2.02e-17 85.1
Msa1338240 AT5G06905.1 22.358 492 317 14 10 445 5 487 3.84e-17 84.3
Msa1338240 AT3G20130.1 24.453 274 176 6 214 462 243 510 5.13e-17 84.0
Msa1338240 AT3G20130.2 24.453 274 176 6 214 462 215 482 6.10e-17 83.6
Msa1338240 AT2G27000.1 21.292 418 281 14 66 441 70 481 6.28e-17 83.6
Msa1338240 AT4G37360.1 24.792 480 288 16 4 435 3 457 7.32e-17 83.2
Msa1338240 AT3G20120.4 23.482 247 164 5 214 441 242 482 7.79e-17 83.2
Msa1338240 AT4G27710.1 24.944 449 282 17 56 462 81 516 8.09e-17 83.2
Msa1338240 AT4G31950.1 30.213 235 127 10 218 425 239 463 8.94e-17 83.2
Msa1338240 AT3G28740.1 28.571 182 115 3 259 435 294 465 9.52e-17 83.2
Msa1338240 AT5G24910.1 23.146 445 275 19 62 458 102 527 1.32e-16 82.8
Msa1338240 AT3G48320.1 23.567 471 312 18 1 437 1 457 1.41e-16 82.4
Msa1338240 AT4G37330.1 24.416 471 311 16 1 439 1 458 1.43e-16 82.4
Msa1338240 AT2G28860.1 22.650 468 311 15 29 460 33 485 1.73e-16 82.0
Msa1338240 AT4G13290.1 23.128 454 296 14 31 446 29 467 1.88e-16 82.0
Msa1338240 AT4G13310.1 22.958 453 298 13 35 446 32 474 2.23e-16 82.0
Msa1338240 AT4G37320.1 25.792 221 153 4 226 441 249 463 2.24e-16 82.0
Msa1338240 AT3G20120.2 23.482 247 164 5 214 441 106 346 2.28e-16 80.9
Msa1338240 AT3G20120.3 23.482 247 164 5 214 441 106 346 2.28e-16 80.9
Msa1338240 AT3G20120.1 23.482 247 164 5 214 441 106 346 2.28e-16 80.9
Msa1338240 AT4G37310.1 23.108 502 317 20 5 453 4 489 2.45e-16 81.6
Msa1338240 AT1G66540.2 26.316 247 162 5 218 452 70 308 2.58e-16 80.1
Msa1338240 AT3G52970.1 26.068 468 289 16 26 443 27 487 2.77e-16 81.6
Msa1338240 AT1G66540.1 25.506 247 166 4 218 452 127 367 4.37e-16 80.1
Msa1338240 AT5G07990.1 22.481 516 324 22 3 463 6 500 5.32e-16 80.9
Msa1338240 AT3G14690.1 25.316 395 242 17 65 421 90 469 5.45e-16 80.9
Msa1338240 AT2G28850.1 22.917 384 253 11 108 460 114 485 5.60e-16 80.5
Msa1338240 AT3G14690.2 25.316 395 242 17 65 421 125 504 5.66e-16 80.9
Msa1338240 AT4G37410.1 23.226 465 296 15 14 435 12 458 5.68e-16 80.5
Msa1338240 AT3G14650.1 22.273 440 282 15 64 461 89 510 5.80e-16 80.5
Msa1338240 AT1G31800.1 26.738 187 123 3 258 437 362 541 6.19e-16 80.9
Msa1338240 AT1G13080.2 27.500 240 153 6 218 441 122 356 6.68e-16 79.7
Msa1338240 AT5G06900.1 22.334 497 329 18 9 462 7 489 9.70e-16 80.1
Msa1338240 AT4G37340.1 24.946 465 292 16 12 435 9 457 1.14e-15 79.7
Msa1338240 AT1G50520.1 23.704 270 176 7 214 459 246 509 2.02e-15 79.0
Msa1338240 AT1G74110.1 22.414 406 254 14 81 435 112 507 2.20e-15 79.0
Msa1338240 AT5G04660.1 23.414 457 290 16 24 447 62 491 2.27e-15 79.0
Msa1338240 AT2G30770.1 23.725 451 293 14 35 445 33 472 2.33e-15 78.6
Msa1338240 AT1G64940.1 29.717 212 134 6 238 439 276 482 2.76e-15 78.6
Msa1338240 AT5G24900.2 27.536 207 128 6 263 458 210 405 2.84e-15 77.8
Msa1338240 AT3G26220.1 25.470 479 304 17 3 437 1 470 2.97e-15 78.6
Msa1338240 AT1G74550.1 23.060 464 300 15 13 436 3 449 4.46e-15 77.8
Msa1338240 AT1G64950.1 24.675 462 283 18 33 439 30 481 4.49e-15 77.8
Msa1338240 AT4G15360.1 24.400 250 165 5 214 445 241 484 4.55e-15 77.8
Msa1338240 AT3G32047.1 21.806 454 297 14 46 454 53 493 4.60e-15 77.8
Msa1338240 AT5G24900.1 27.273 209 130 6 263 460 327 524 5.32e-15 77.8
Msa1338240 AT1G13090.2 23.568 454 280 14 35 437 28 465 6.09e-15 77.4
Msa1338240 AT3G53130.1 24.515 412 247 15 64 426 105 501 6.21e-15 77.4
Msa1338240 AT3G10570.1 25.588 340 209 12 139 447 166 492 7.46e-15 77.0
Msa1338240 AT3G20935.1 25.824 182 119 2 270 441 134 309 9.35e-15 75.9
Msa1338240 AT3G26200.1 24.211 475 306 19 35 462 28 495 1.11e-14 76.6
Msa1338240 AT3G20100.1 22.826 276 181 7 214 463 242 511 1.31e-14 76.3
Msa1338240 AT4G15330.1 22.269 238 163 4 220 441 246 477 1.52e-14 76.3
Msa1338240 AT1G28430.1 21.774 248 170 4 218 447 246 487 1.78e-14 75.9
Msa1338240 AT2G23190.1 23.810 462 299 15 18 439 57 505 1.79e-14 76.3
Msa1338240 AT4G15110.1 25.676 222 124 4 258 445 344 558 1.94e-14 76.3
Msa1338240 AT4G15330.2 22.269 238 163 4 220 441 218 449 1.98e-14 75.9
Msa1338240 AT3G48310.1 22.551 439 301 16 29 437 28 457 2.72e-14 75.5
Msa1338240 AT2G45580.1 22.912 467 298 17 45 464 48 499 3.78e-14 75.1
Msa1338240 AT5G36220.1 24.034 233 158 5 217 440 246 468 3.90e-14 75.1
Msa1338240 AT3G26180.2 26.407 231 147 7 224 437 111 335 4.50e-14 73.9
Msa1338240 AT5G36220.2 24.138 232 157 5 217 439 100 321 4.53e-14 73.9
Msa1338240 AT3G48290.1 23.380 432 294 15 36 437 34 458 5.23e-14 74.3
Msa1338240 AT3G14680.1 25.412 425 251 20 79 463 104 502 1.03e-13 73.6
Msa1338240 AT2G45580.2 25.091 275 176 10 209 464 82 345 1.36e-13 72.4
Msa1338240 AT1G33730.1 27.928 222 141 8 227 437 126 339 1.50e-13 72.4
Msa1338240 AT1G33730.2 27.928 222 141 8 227 437 126 339 1.50e-13 72.4
Msa1338240 AT2G12190.1 24.416 471 286 18 29 439 23 483 2.10e-13 72.8
Msa1338240 AT3G53300.1 23.438 448 289 15 35 437 28 466 3.59e-13 72.0
Msa1338240 AT3G14660.1 22.799 443 276 18 64 461 89 510 3.94e-13 71.6
Msa1338240 AT3G14640.2 23.077 403 245 16 64 421 111 493 3.95e-13 72.0
Msa1338240 AT3G14640.1 23.077 403 245 16 64 421 89 471 3.99e-13 71.6
Msa1338240 AT3G26210.1 25.616 203 135 4 246 437 271 468 4.59e-13 71.6
Msa1338240 AT5G05260.2 21.503 479 308 15 26 445 31 500 4.65e-13 71.6
Msa1338240 AT4G15380.1 23.383 201 136 3 247 435 279 473 9.07e-13 70.9
Msa1338240 AT3G48520.1 24.576 236 149 7 217 433 243 468 1.16e-12 70.5
Msa1338240 AT3G14620.1 23.245 413 278 14 80 461 109 513 2.17e-12 69.3
Msa1338240 AT2G23220.1 22.063 349 232 11 121 439 138 476 2.17e-12 69.3
Msa1338240 AT2G02580.1 23.820 466 307 15 12 437 8 465 3.10e-12 68.9
Msa1338240 AT1G75130.1 23.559 399 258 11 67 433 89 472 4.67e-12 68.6
Msa1338240 AT3G03470.1 22.360 483 317 18 11 439 4 482 8.69e-12 67.8
Msa1338240 AT4G12330.1 26.749 243 154 8 215 441 252 486 1.06e-11 67.4
Msa1338240 AT5G24950.1 22.247 454 299 18 35 446 32 473 1.51e-11 66.6
Msa1338240 AT1G34540.1 27.805 205 136 5 245 439 270 472 1.59e-11 66.6
Msa1338240 AT5G52320.2 26.667 240 140 8 228 441 251 480 1.82e-11 66.6
Msa1338240 AT5G52320.1 26.667 240 140 8 228 441 251 480 1.89e-11 66.6
Msa1338240 AT2G45570.1 21.622 444 284 15 50 444 52 480 2.97e-11 65.9
Msa1338240 AT4G39500.2 24.740 384 227 15 123 460 146 513 3.28e-11 65.9
Msa1338240 AT4G39500.1 24.740 384 227 15 123 460 96 463 3.64e-11 65.5
Msa1338240 AT3G56630.1 28.571 224 143 7 232 441 254 474 5.42e-11 65.1
Msa1338240 AT3G26830.1 23.478 230 156 5 214 437 250 465 5.86e-11 65.1
Msa1338240 AT3G48300.1 23.043 447 288 16 27 435 24 452 6.43e-11 64.7
Msa1338240 AT3G48300.2 23.043 447 288 16 27 435 26 454 6.45e-11 64.7

Find 106 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATCATTGTTCTCAAAAT+TGG 0.143545 tig0001799:+5999 Msa1338240:three_prime_UTR
ATGTTATGGGCAATCCATTT+TGG 0.169494 tig0001799:-5885 Msa1338240:intergenic
CTTGAGAATAGAACAGAAAT+AGG 0.193026 tig0001799:+6125 Msa1338240:three_prime_UTR
GGAAAGTATTGCCATTATTT+AGG 0.206433 tig0001799:+4937 Msa1338240:CDS
GGGTTATTCAAGAGACTCTT+AGG 0.207268 tig0001799:+4733 Msa1338240:CDS
TGTTACTACACTCTAGAAAA+AGG 0.215205 tig0001799:+4192 Msa1338240:CDS
GTGAAGAAAAGGGTCTTAAT+TGG 0.228260 tig0001799:+4679 Msa1338240:CDS
CAAATAGCAGATAATGTAAT+TGG 0.241666 tig0001799:+4390 Msa1338240:CDS
TAAAATGATTCTATAGAATA+TGG 0.248030 tig0001799:-5957 Msa1338240:intergenic
TATGTTCAAGTCTCACATTT+TGG 0.249228 tig0001799:+3655 Msa1338240:CDS
TTGGGAAGATACAAAGAAAA+TGG 0.257764 tig0001799:+4698 Msa1338240:CDS
TCTGGATCTTTGAAGTTGTT+TGG 0.275156 tig0001799:-4975 Msa1338240:intergenic
TTTGATGCAAAGAAGACATT+AGG 0.280529 tig0001799:-3511 Msa1338240:intergenic
GGCAATACTTTCCACCCTTT+TGG 0.285833 tig0001799:-4927 Msa1338240:intergenic
CACTTACAATCACTGATTCT+AGG 0.312569 tig0001799:-4491 Msa1338240:intergenic
AGTGTTCCTGGAAGATTAAT+TGG 0.316188 tig0001799:-4228 Msa1338240:intergenic
ACAATATTTCTGATGGCTTC+TGG 0.317094 tig0001799:-3857 Msa1338240:intergenic
CAAGAATACAAAGATTTGTT+AGG 0.318246 tig0001799:+4330 Msa1338240:CDS
GCCACTCCCACCTGGTTCAA+TGG 0.321251 tig0001799:+3444 Msa1338240:CDS
TTCTTAGGATATAATGTTAT+GGG 0.322019 tig0001799:-5898 Msa1338240:intergenic
CCAAATGGCATAAAAGTATT+GGG 0.326964 tig0001799:-5143 Msa1338240:intergenic
CTTCTTAGGATATAATGTTA+TGG 0.333113 tig0001799:-5899 Msa1338240:intergenic
CATAGCAAGAGCAAATAGTT+TGG 0.340188 tig0001799:+6180 Msa1338240:three_prime_UTR
TGCAGTGATATCTACTTCTT+AGG 0.355012 tig0001799:-5913 Msa1338240:intergenic
TCCTTAGGAAACTTGTTAGT+TGG 0.362429 tig0001799:-6328 Msa1338240:intergenic
TTGAAGAGCAAAGAAGAAAA+TGG 0.364423 tig0001799:+4657 Msa1338240:CDS
TGATGTATATTCCTAAATAA+TGG 0.371085 tig0001799:-4948 Msa1338240:intergenic
TCAATGCCAATTAATCTTCC+AGG 0.372340 tig0001799:+4222 Msa1338240:CDS
CCACTCCCACCTGGTTCAAT+GGG 0.378139 tig0001799:+3445 Msa1338240:CDS
ACAAAGAATGGGATTCAATA+TGG 0.378418 tig0001799:+5847 Msa1338240:CDS
AGATTTGTTAGGTTCATTCA+TGG 0.383093 tig0001799:+4341 Msa1338240:CDS
AGAAGAAAATGGTGAAGAAA+AGG 0.387414 tig0001799:+4668 Msa1338240:CDS
CTATTCTCAAGAATACCCTT+TGG 0.394490 tig0001799:-6113 Msa1338240:intergenic
TTGATGCAAAGAAGACATTA+GGG 0.395128 tig0001799:-3510 Msa1338240:intergenic
TATTCTCAAGAATACCCTTT+GGG 0.398061 tig0001799:-6112 Msa1338240:intergenic
GCCAAATGGCATAAAAGTAT+TGG 0.401232 tig0001799:-5144 Msa1338240:intergenic
TGAAAAGTTTCTCCTATGTA+AGG 0.401439 tig0001799:-3472 Msa1338240:intergenic
TTAGGGTATCTTATACCAAA+AGG 0.407040 tig0001799:+4912 Msa1338240:intron
GTTTGATCCTTCAAGATTTG+AGG 0.407796 tig0001799:+5001 Msa1338240:CDS
ATAGCAAGAGCAAATAGTTT+GGG 0.408177 tig0001799:+6181 Msa1338240:three_prime_UTR
GCCTTGTGGAAGAGTGTTCC+TGG 0.408188 tig0001799:-4240 Msa1338240:intergenic
AACATCCTCTCTTTGCTAGC+TGG 0.408988 tig0001799:-3758 Msa1338240:intergenic
CAAATTATTTGTGGGTTACA+AGG 0.419490 tig0001799:-6302 Msa1338240:intergenic
AACACAAACTTAGCAGCTTC+AGG 0.424960 tig0001799:-3704 Msa1338240:intergenic
GTTTGTCAAGTGTATATAAG+AGG 0.435969 tig0001799:+6154 Msa1338240:three_prime_UTR
AATACCCTTTGGGTGTCTAT+AGG 0.438128 tig0001799:-6102 Msa1338240:intergenic
TCCCACCTGGTTCAATGGGT+TGG 0.438219 tig0001799:+3449 Msa1338240:CDS
TCTTTGCTAGCTGGGAATGT+TGG 0.447228 tig0001799:-3749 Msa1338240:intergenic
ATAATGACCTCAAATCTTGA+AGG 0.449666 tig0001799:-5008 Msa1338240:intergenic
CACTTTCCTTGAAATGAAAA+CGG 0.452936 tig0001799:+3940 Msa1338240:CDS
AGTGGGATCCACGCTTGTCC+TGG 0.453521 tig0001799:+5167 Msa1338240:CDS
TGAAGAAAAGGGTCTTAATT+GGG 0.460219 tig0001799:+4680 Msa1338240:CDS
AGAAAATGGTTATAACTTCA+AGG 0.460262 tig0001799:+4712 Msa1338240:CDS
AGTTGGACACAAATTATTTG+TGG 0.461788 tig0001799:-6311 Msa1338240:intergenic
TGTCTCTAACAAATGTCCTT+AGG 0.470748 tig0001799:-6343 Msa1338240:intergenic
CCCATTGAACCAGGTGGGAG+TGG 0.471644 tig0001799:-3445 Msa1338240:intergenic
TCAGCAATGGATTCAATGTC+AGG 0.474991 tig0001799:-3881 Msa1338240:intergenic
GTTGGACACAAATTATTTGT+GGG 0.476163 tig0001799:-6310 Msa1338240:intergenic
ATCTTGGCTAATTCGTTGCC+AGG 0.476672 tig0001799:-5185 Msa1338240:intergenic
TCTGTGGAGGGTACAAAGAA+TGG 0.482728 tig0001799:+5835 Msa1338240:CDS
TTGAGAATAGAACAGAAATA+GGG 0.490247 tig0001799:+6126 Msa1338240:three_prime_UTR
GCTAGCAAAGAGAGGATGTT+GGG 0.494280 tig0001799:+3761 Msa1338240:CDS
GAGGACTAAAATCTCCATCT+TGG 0.496631 tig0001799:-5201 Msa1338240:intergenic
ACATCCTCTCTTTGCTAGCT+GGG 0.501226 tig0001799:-3757 Msa1338240:intergenic
TGAAGATAGTCTTAAATCAA+TGG 0.503360 tig0001799:+3901 Msa1338240:CDS
GAAGAAAATGGTGAAGAAAA+GGG 0.507607 tig0001799:+4669 Msa1338240:CDS
CTAACTCTCTCAACAAAATG+AGG 0.515683 tig0001799:+6024 Msa1338240:three_prime_UTR
GTTGAAGATGTTGAATATCA+AGG 0.517370 tig0001799:+4792 Msa1338240:CDS
GTCAGGAACAATATTTCTGA+TGG 0.519311 tig0001799:-3864 Msa1338240:intergenic
TTTAAGACTATCTTCAGCAA+TGG 0.522589 tig0001799:-3894 Msa1338240:intergenic
TAGGGTATCTTATACCAAAA+GGG 0.525997 tig0001799:+4913 Msa1338240:intron
GCGTGGATCCCACTGCCAAA+TGG 0.526371 tig0001799:-5158 Msa1338240:intergenic
GAAAATGGTTATAACTTCAA+GGG 0.528921 tig0001799:+4713 Msa1338240:CDS
CTGTGGAGGGTACAAAGAAT+GGG 0.531268 tig0001799:+5836 Msa1338240:CDS
TTCTTGCTTTCATTGCCTTG+TGG 0.535813 tig0001799:-4254 Msa1338240:intergenic
TCAATGGGTTGGCCTTACAT+AGG 0.539375 tig0001799:+3460 Msa1338240:CDS
TTGTGGTCAGATGATGTAAG+AGG 0.541287 tig0001799:-5220 Msa1338240:intergenic
GGTTATTCAAGAGACTCTTA+GGG 0.547456 tig0001799:+4734 Msa1338240:CDS
CATGACTTGCCACTCCCACC+TGG 0.548174 tig0001799:+3436 Msa1338240:CDS
TGGCAACGAATTAGCCAAGA+TGG 0.550209 tig0001799:+5187 Msa1338240:CDS
ACGTGGATTGTTAAGTACCT+TGG 0.552887 tig0001799:+4453 Msa1338240:CDS
AAGTCCTCAAAAGATTGTAT+TGG 0.556242 tig0001799:+6251 Msa1338240:three_prime_UTR
TATTATGTGCAGGTGGTCTG+TGG 0.558495 tig0001799:+5819 Msa1338240:intron
TAGCTCAAATAATCTCAAGT+AGG 0.560265 tig0001799:+4295 Msa1338240:CDS
CCACAGCTAGTGTGCTTACG+TGG 0.560530 tig0001799:+4436 Msa1338240:CDS
TTTGGCCTATAGACACCCAA+AGG 0.567732 tig0001799:+6097 Msa1338240:three_prime_UTR
GAATAGAACAGAAATAGGGA+TGG 0.568847 tig0001799:+6130 Msa1338240:three_prime_UTR
TAAGGCCAACCCATTGAACC+AGG 0.575773 tig0001799:-3454 Msa1338240:intergenic
ATCATCTGACCACAAAGTAC+AGG 0.579729 tig0001799:+5228 Msa1338240:CDS
TCCAACTAACAAGTTTCCTA+AGG 0.581168 tig0001799:+6327 Msa1338240:three_prime_UTR
GATAGTCTTAAATCAATGGA+AGG 0.588851 tig0001799:+3905 Msa1338240:CDS
TATGTGCAGGTGGTCTGTGG+AGG 0.591922 tig0001799:+5822 Msa1338240:intron
AGCTAGCAAAGAGAGGATGT+TGG 0.594425 tig0001799:+3760 Msa1338240:CDS
TTGGCCTATAGACACCCAAA+GGG 0.595556 tig0001799:+6098 Msa1338240:three_prime_UTR
AAGATCAAGACAATGTTGCA+AGG 0.598545 tig0001799:+6048 Msa1338240:three_prime_UTR
AGATCAAGACAATGTTGCAA+GGG 0.611271 tig0001799:+6049 Msa1338240:three_prime_UTR
CCACGTAAGCACACTAGCTG+TGG 0.613780 tig0001799:-4436 Msa1338240:intergenic
ATGTGCAGGTGGTCTGTGGA+GGG 0.624444 tig0001799:+5823 Msa1338240:intron
GCCAACCCATTGAACCAGGT+GGG 0.633215 tig0001799:-3450 Msa1338240:intergenic
GGTATCTTATACCAAAAGGG+TGG 0.634001 tig0001799:+4916 Msa1338240:CDS
CATTCCCAGCTAGCAAAGAG+AGG 0.636592 tig0001799:+3753 Msa1338240:CDS
ATTCGTTGCCAGGACAAGCG+TGG 0.640010 tig0001799:-5175 Msa1338240:intergenic
GGACTTGAAATCATCACACA+TGG 0.650213 tig0001799:-3683 Msa1338240:intergenic
TCCAGGAACACTCTTCCACA+AGG 0.650772 tig0001799:+4239 Msa1338240:CDS
GGCCAACCCATTGAACCAGG+TGG 0.651527 tig0001799:-3451 Msa1338230:intergenic
TGATTCTATAGAATATGGTG+TGG 0.751973 tig0001799:-5952 Msa1338230:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTTTCTTATATATTTT+AGG + tig0001799:3624-3643 Msa1338240:intron 10.0%
!! TTAAAAAATGATTAAACTAA+TGG + tig0001799:4028-4047 Msa1338240:intron 10.0%
!! TAAAAAATGATTAAACTAAT+GGG + tig0001799:4029-4048 Msa1338240:intron 10.0%
!! TAAAAACATAAACATAAACA+TGG + tig0001799:3327-3346 Msa1338240:exon 15.0%
!!! TTTCTTATATATTTTAGGTA+TGG + tig0001799:3629-3648 Msa1338240:intron 15.0%
!!! AAATTTAAGGTATTAAGATT+TGG - tig0001799:4829-4848 Msa1338240:intergenic 15.0%
!! TAAAATGATTCTATAGAATA+TGG - tig0001799:5960-5979 Msa1338240:intergenic 15.0%
!!! CTATAGAATCATTTTAAATA+TGG + tig0001799:5964-5983 Msa1338240:three_prime_UTR 15.0%
!!! TTTTTTTCTTTTCAATTTTG+AGG + tig0001799:6226-6245 Msa1338240:three_prime_UTR 15.0%
!! GTAATTAAAAATATTCAATC+AGG - tig0001799:6369-6388 Msa1338240:intergenic 15.0%
!!! TTTCGCTAATTTTCAATTTT+TGG + tig0001799:4087-4106 Msa1338240:intron 20.0%
!!! TTCGCTAATTTTCAATTTTT+GGG + tig0001799:4088-4107 Msa1338240:intron 20.0%
!!! TTTTACAAAACAATGATTGA+AGG - tig0001799:4536-4555 Msa1338240:intergenic 20.0%
!! CTTGAAAAATTTGTATAGTT+TGG + tig0001799:4585-4604 Msa1338240:intron 20.0%
!!! TTGTTTTGACATGTTTTAAT+AGG + tig0001799:4617-4636 Msa1338240:intron 20.0%
!! TGATGTATATTCCTAAATAA+TGG - tig0001799:4951-4970 Msa1338240:intergenic 20.0%
!!! TTTTGTATTAACACATGAAT+AGG - tig0001799:5072-5091 Msa1338240:intergenic 20.0%
!! ATTATGTAGAATTGATTGTT+TGG + tig0001799:5418-5437 Msa1338240:intron 20.0%
!! CTAATTGATAGAATTGATAA+AGG + tig0001799:5486-5505 Msa1338240:intron 20.0%
!!! TGTTTATAATTGATTCTACT+AGG + tig0001799:5531-5550 Msa1338240:intron 20.0%
!! TTCTTAGGATATAATGTTAT+GGG - tig0001799:5901-5920 Msa1338240:intergenic 20.0%
!! CAAAATAAGTTGAACATATG+AGG - tig0001799:3252-3271 Msa0633830:intergenic 25.0%
! TCTTTGCATCAAAAATCAAA+AGG + tig0001799:3521-3540 Msa1338240:CDS 25.0%
! ATCAAAAATCAAAAGGTTGA+TGG + tig0001799:3528-3547 Msa1338240:intron 25.0%
!!! CAAGCTATATTTTTTCATCA+AGG + tig0001799:3788-3807 Msa1338240:CDS 25.0%
!! TGAAGATAGTCTTAAATCAA+TGG + tig0001799:3901-3920 Msa1338240:CDS 25.0%
!! CAAGAATACAAAGATTTGTT+AGG + tig0001799:4330-4349 Msa1338240:CDS 25.0%
! CAAATAGCAGATAATGTAAT+TGG + tig0001799:4390-4409 Msa1338240:CDS 25.0%
! AAACAATGATTGAAGGATAA+AGG - tig0001799:4529-4548 Msa1338240:intergenic 25.0%
!!! TTTTGACATGTTTTAATAGG+AGG + tig0001799:4620-4639 Msa1338240:intron 25.0%
! AGAAAATGGTTATAACTTCA+AGG + tig0001799:4712-4731 Msa1338240:CDS 25.0%
! GAAAATGGTTATAACTTCAA+GGG + tig0001799:4713-4732 Msa1338240:CDS 25.0%
! CATAGAATCTATAAGTCTAA+AGG - tig0001799:4872-4891 Msa1338240:intergenic 25.0%
! AGACTTATAGATTCTATGTT+TGG + tig0001799:4874-4893 Msa1338240:intron 25.0%
! AATAGAATCTATCAAACTCT+TGG - tig0001799:5098-5117 Msa1338240:intergenic 25.0%
! TTTCACTCAAATTTAGTGTT+TGG + tig0001799:5279-5298 Msa1338240:intron 25.0%
!! TCTGAGAATTGATTTATGTT+TGG + tig0001799:5390-5409 Msa1338240:intron 25.0%
! AGAATTGATAAAGGACTAAT+AGG + tig0001799:5495-5514 Msa1338240:intron 25.0%
! CTTCTTAGGATATAATGTTA+TGG - tig0001799:5902-5921 Msa1338240:intergenic 25.0%
! CTTATCATTGTTCTCAAAAT+TGG + tig0001799:5999-6018 Msa1338240:three_prime_UTR 25.0%
! TTGAGAATAGAACAGAAATA+GGG + tig0001799:6126-6145 Msa1338240:three_prime_UTR 25.0%
ATTGTTATAAGAGAGAGAGA+AGG - tig0001799:3282-3301 Msa0633830:intergenic 30.0%
TGAAAAGTTTCTCCTATGTA+AGG - tig0001799:3475-3494 Msa1338240:intergenic 30.0%
TTGATGCAAAGAAGACATTA+GGG - tig0001799:3513-3532 Msa1338240:intergenic 30.0%
TTTGATGCAAAGAAGACATT+AGG - tig0001799:3514-3533 Msa1338240:intergenic 30.0%
TGGTTGAATATGGATAAGAT+TGG - tig0001799:3570-3589 Msa1338240:intergenic 30.0%
!! CATATTCAACCACTTTTCAT+GGG + tig0001799:3578-3597 Msa1338240:intron 30.0%
! TGAAATTTTCCCATGAAAAG+TGG - tig0001799:3590-3609 Msa1338240:intergenic 30.0%
! TATGTTCAAGTCTCACATTT+TGG + tig0001799:3655-3674 Msa1338240:CDS 30.0%
! ATGTTCAAGTCTCACATTTT+GGG + tig0001799:3656-3675 Msa1338240:CDS 30.0%
! TTTAAGACTATCTTCAGCAA+TGG - tig0001799:3897-3916 Msa1338240:intergenic 30.0%
! GATAGTCTTAAATCAATGGA+AGG + tig0001799:3905-3924 Msa1338240:CDS 30.0%
CACTTTCCTTGAAATGAAAA+CGG + tig0001799:3940-3959 Msa1338240:CDS 30.0%
! GTTGCTCTACTTTCAATTTT+TGG + tig0001799:4132-4151 Msa1338240:CDS 30.0%
! TGTTACTACACTCTAGAAAA+AGG + tig0001799:4192-4211 Msa1338240:CDS 30.0%
! GTTACTACACTCTAGAAAAA+GGG + tig0001799:4193-4212 Msa1338240:CDS 30.0%
TAGCTCAAATAATCTCAAGT+AGG + tig0001799:4295-4314 Msa1338240:CDS 30.0%
!! AGATTTGTTAGGTTCATTCA+TGG + tig0001799:4341-4360 Msa1338240:CDS 30.0%
TCATTCATGGATGAAAAATC+AGG + tig0001799:4354-4373 Msa1338240:CDS 30.0%
ATCAGTGATTGTAAGTGTTT+AGG + tig0001799:4497-4516 Msa1338240:intron 30.0%
TCAGTGATTGTAAGTGTTTA+GGG + tig0001799:4498-4517 Msa1338240:intron 30.0%
AATGATTGAAGGATAAAGGT+AGG - tig0001799:4525-4544 Msa1338240:intergenic 30.0%
TTGAAGAGCAAAGAAGAAAA+TGG + tig0001799:4657-4676 Msa1338240:CDS 30.0%
AGAAGAAAATGGTGAAGAAA+AGG + tig0001799:4668-4687 Msa1338240:CDS 30.0%
GAAGAAAATGGTGAAGAAAA+GGG + tig0001799:4669-4688 Msa1338240:CDS 30.0%
TGAAGAAAAGGGTCTTAATT+GGG + tig0001799:4680-4699 Msa1338240:CDS 30.0%
TTGGGAAGATACAAAGAAAA+TGG + tig0001799:4698-4717 Msa1338240:CDS 30.0%
GTTGAAGATGTTGAATATCA+AGG + tig0001799:4792-4811 Msa1338240:CDS 30.0%
TCTATAAGTCTAAAGGCAAA+GGG - tig0001799:4865-4884 Msa1338240:intergenic 30.0%
ATCTATAAGTCTAAAGGCAA+AGG - tig0001799:4866-4885 Msa1338240:intergenic 30.0%
! TGGTGTTTTTCTTCTTCTTT+AGG + tig0001799:4894-4913 Msa1338240:intron 30.0%
! GGTGTTTTTCTTCTTCTTTA+GGG + tig0001799:4895-4914 Msa1338240:intron 30.0%
! TTAGGGTATCTTATACCAAA+AGG + tig0001799:4912-4931 Msa1338240:intron 30.0%
! TAGGGTATCTTATACCAAAA+GGG + tig0001799:4913-4932 Msa1338240:intron 30.0%
!! GGAAAGTATTGCCATTATTT+AGG + tig0001799:4937-4956 Msa1338240:CDS 30.0%
ATAATGACCTCAAATCTTGA+AGG - tig0001799:5011-5030 Msa1338240:intergenic 30.0%
GAAATCACACAACAAAACTA+TGG - tig0001799:5050-5069 Msa1338240:intergenic 30.0%
GATTCTATTAATCATTTGCC+AGG + tig0001799:5109-5128 Msa1338240:intron 30.0%
!!! CATAAAAGTATTGGGTTTTG+TGG - tig0001799:5138-5157 Msa1338240:intergenic 30.0%
!! CCAAATGGCATAAAAGTATT+GGG - tig0001799:5146-5165 Msa1338240:intergenic 30.0%
!!! GAAAAGTTTGCTAGAACTTT+TGG + tig0001799:5586-5605 Msa1338240:intron 30.0%
ATCTAAACATGCACTAAGTT+TGG + tig0001799:5745-5764 Msa1338240:intron 30.0%
TTGTTTGCATTATTATGTGC+AGG + tig0001799:5809-5828 Msa1338240:intron 30.0%
ACAAAGAATGGGATTCAATA+TGG + tig0001799:5847-5866 Msa1338240:CDS 30.0%
TGATTCTATAGAATATGGTG+TGG - tig0001799:5955-5974 Msa1338240:intergenic 30.0%
! ATCAACTCTTGCTTTCTTTT+TGG + tig0001799:6079-6098 Msa1338240:three_prime_UTR 30.0%
TATTCTCAAGAATACCCTTT+GGG - tig0001799:6115-6134 Msa1338240:intergenic 30.0%
CTTGAGAATAGAACAGAAAT+AGG + tig0001799:6125-6144 Msa1338240:three_prime_UTR 30.0%
GTTTGTCAAGTGTATATAAG+AGG + tig0001799:6154-6173 Msa1338240:three_prime_UTR 30.0%
ATAGCAAGAGCAAATAGTTT+GGG + tig0001799:6181-6200 Msa1338240:three_prime_UTR 30.0%
AAGTCCTCAAAAGATTGTAT+TGG + tig0001799:6251-6270 Msa1338240:three_prime_UTR 30.0%
! ACTACCAATACAATCTTTTG+AGG - tig0001799:6258-6277 Msa1338240:intergenic 30.0%
! CAAATTATTTGTGGGTTACA+AGG - tig0001799:6305-6324 Msa1338240:intergenic 30.0%
GTTGGACACAAATTATTTGT+GGG - tig0001799:6313-6332 Msa1338240:intergenic 30.0%
AGTTGGACACAAATTATTTG+TGG - tig0001799:6314-6333 Msa1338240:intergenic 30.0%
!!! GTCATGTCTTTTTGAGACAA+AGG - tig0001799:3422-3441 Msa1338240:intergenic 35.0%
CCATGAAAAGTGGTTGAATA+TGG - tig0001799:3580-3599 Msa1338240:intergenic 35.0%
!! CCATATTCAACCACTTTTCA+TGG + tig0001799:3577-3596 Msa1338240:intron 35.0%
! ACAATATTTCTGATGGCTTC+TGG - tig0001799:3860-3879 Msa1338240:intergenic 35.0%
! GTCAGGAACAATATTTCTGA+TGG - tig0001799:3867-3886 Msa1338240:intergenic 35.0%
! CGTTTTCATTTCAAGGAAAG+TGG - tig0001799:3942-3961 Msa1338240:intergenic 35.0%
TCAATGCCAATTAATCTTCC+AGG + tig0001799:4222-4241 Msa1338240:CDS 35.0%
AGTGTTCCTGGAAGATTAAT+TGG - tig0001799:4231-4250 Msa1338240:intergenic 35.0%
! GGACATTGATATTTTCACCA+AGG - tig0001799:4473-4492 Msa1338240:intergenic 35.0%
!! CACTTACAATCACTGATTCT+AGG - tig0001799:4494-4513 Msa1338240:intergenic 35.0%
GTGAAGAAAAGGGTCTTAAT+TGG + tig0001799:4679-4698 Msa1338240:CDS 35.0%
GGTTATTCAAGAGACTCTTA+GGG + tig0001799:4734-4753 Msa1338240:CDS 35.0%
!! TCTGGATCTTTGAAGTTGTT+TGG - tig0001799:4978-4997 Msa1338240:intergenic 35.0%
! CTTGAAGGATCAAACTTTTC+TGG - tig0001799:4996-5015 Msa1338240:intergenic 35.0%
GTTTGATCCTTCAAGATTTG+AGG + tig0001799:5001-5020 Msa1338240:CDS 35.0%
! CCCAATACTTTTATGCCATT+TGG + tig0001799:5143-5162 Msa1338240:CDS 35.0%
! GCCAAATGGCATAAAAGTAT+TGG - tig0001799:5147-5166 Msa1338240:intergenic 35.0%
! TTTTACCAACCTGTACTTTG+TGG - tig0001799:5240-5259 Msa1338240:intergenic 35.0%
TTTGCATTATTATGTGCAGG+TGG + tig0001799:5812-5831 Msa1338240:intron 35.0%
! TGTTATGGGCAATCCATTTT+GGG - tig0001799:5887-5906 Msa1338240:intergenic 35.0%
! ATGTTATGGGCAATCCATTT+TGG - tig0001799:5888-5907 Msa1338240:intergenic 35.0%
TGCAGTGATATCTACTTCTT+AGG - tig0001799:5916-5935 Msa1338240:intergenic 35.0%
CTAACTCTCTCAACAAAATG+AGG + tig0001799:6024-6043 Msa1338240:three_prime_UTR 35.0%
AAGATCAAGACAATGTTGCA+AGG + tig0001799:6048-6067 Msa1338240:three_prime_UTR 35.0%
AGATCAAGACAATGTTGCAA+GGG + tig0001799:6049-6068 Msa1338240:three_prime_UTR 35.0%
CTATTCTCAAGAATACCCTT+TGG - tig0001799:6116-6135 Msa1338240:intergenic 35.0%
GAATAGAACAGAAATAGGGA+TGG + tig0001799:6130-6149 Msa1338240:three_prime_UTR 35.0%
CATAGCAAGAGCAAATAGTT+TGG + tig0001799:6180-6199 Msa1338240:three_prime_UTR 35.0%
TCCAACTAACAAGTTTCCTA+AGG + tig0001799:6327-6346 Msa1338240:three_prime_UTR 35.0%
!! TCCTTAGGAAACTTGTTAGT+TGG - tig0001799:6331-6350 Msa1338240:intergenic 35.0%
TGTCTCTAACAAATGTCCTT+AGG - tig0001799:6346-6365 Msa1338240:intergenic 35.0%
GGACTTGAAATCATCACACA+TGG - tig0001799:3686-3705 Msa1338240:intergenic 40.0%
AACACAAACTTAGCAGCTTC+AGG - tig0001799:3707-3726 Msa1338240:intergenic 40.0%
! TCAGCAATGGATTCAATGTC+AGG - tig0001799:3884-3903 Msa1338240:intergenic 40.0%
! GACTCACCGTTTTCATTTCA+AGG - tig0001799:3949-3968 Msa1338240:intergenic 40.0%
TTCTTGCTTTCATTGCCTTG+TGG - tig0001799:4257-4276 Msa1338240:intergenic 40.0%
! ACGTGGATTGTTAAGTACCT+TGG + tig0001799:4453-4472 Msa1338240:CDS 40.0%
GGGTTATTCAAGAGACTCTT+AGG + tig0001799:4733-4752 Msa1338240:CDS 40.0%
GGTATCTTATACCAAAAGGG+TGG + tig0001799:4916-4935 Msa1338240:CDS 40.0%
!! ACTTTTATGCCATTTGGCAG+TGG + tig0001799:5149-5168 Msa1338240:CDS 40.0%
!! CTTTTATGCCATTTGGCAGT+GGG + tig0001799:5150-5169 Msa1338240:CDS 40.0%
GAGGACTAAAATCTCCATCT+TGG - tig0001799:5204-5223 Msa1338240:intergenic 40.0%
TTGTGGTCAGATGATGTAAG+AGG - tig0001799:5223-5242 Msa1338240:intergenic 40.0%
ATCATCTGACCACAAAGTAC+AGG + tig0001799:5228-5247 Msa1338240:CDS 40.0%
TGAACCAAACACACACTTAG+AGG - tig0001799:5307-5326 Msa1338240:intergenic 40.0%
!! CATTTTGGGGAAGAGCAAAA+GGG - tig0001799:5873-5892 Msa1338240:intergenic 40.0%
! GTTATGGGCAATCCATTTTG+GGG - tig0001799:5886-5905 Msa1338240:intergenic 40.0%
AATACCCTTTGGGTGTCTAT+AGG - tig0001799:6105-6124 Msa1338240:intergenic 40.0%
!! TCAATGGGTTGGCCTTACAT+AGG + tig0001799:3460-3479 Msa1338240:CDS 45.0%
TCTTTGCTAGCTGGGAATGT+TGG - tig0001799:3752-3771 Msa1338240:intergenic 45.0%
ACATCCTCTCTTTGCTAGCT+GGG - tig0001799:3760-3779 Msa1338240:intergenic 45.0%
AACATCCTCTCTTTGCTAGC+TGG - tig0001799:3761-3780 Msa1338240:intergenic 45.0%
AGCTAGCAAAGAGAGGATGT+TGG + tig0001799:3760-3779 Msa1338240:CDS 45.0%
GCTAGCAAAGAGAGGATGTT+GGG + tig0001799:3761-3780 Msa1338240:CDS 45.0%
! GGCAATACTTTCCACCCTTT+TGG - tig0001799:4930-4949 Msa1338240:intergenic 45.0%
ATCTTGGCTAATTCGTTGCC+AGG - tig0001799:5188-5207 Msa1338240:intergenic 45.0%
TGGCAACGAATTAGCCAAGA+TGG + tig0001799:5187-5206 Msa1338240:CDS 45.0%
TCTGACCACAAAGTACAGGT+TGG + tig0001799:5232-5251 Msa1338240:intron 45.0%
GGATCCTCTAAGTGTGTGTT+TGG + tig0001799:5300-5319 Msa1338240:intron 45.0%
TATTATGTGCAGGTGGTCTG+TGG + tig0001799:5819-5838 Msa1338240:intron 45.0%
! TCTGTGGAGGGTACAAAGAA+TGG + tig0001799:5835-5854 Msa1338240:CDS 45.0%
! CTGTGGAGGGTACAAAGAAT+GGG + tig0001799:5836-5855 Msa1338240:CDS 45.0%
!! CCATTTTGGGGAAGAGCAAA+AGG - tig0001799:5874-5893 Msa1338240:intergenic 45.0%
! CCTTTTGCTCTTCCCCAAAA+TGG + tig0001799:5871-5890 Msa1338240:CDS 45.0%
TTTGGCCTATAGACACCCAA+AGG + tig0001799:6097-6116 Msa1338240:three_prime_UTR 45.0%
TTGGCCTATAGACACCCAAA+GGG + tig0001799:6098-6117 Msa1338240:three_prime_UTR 45.0%
!! TTAATTTACAAAATAAATAA+TGG + tig0001799:4062-4081 Msa1338240:intron 5.0%
!! TAATTTACAAAATAAATAAT+GGG + tig0001799:4063-4082 Msa1338240:intron 5.0%
!!! ATATATTTATTATTTTTTAG+TGG + tig0001799:4562-4581 Msa1338240:intron 5.0%
!! AAAAAAAAAATGAAAATTTA+AGG - tig0001799:4842-4861 Msa1338240:intergenic 5.0%
TAAGGCCAACCCATTGAACC+AGG - tig0001799:3457-3476 Msa1338240:intergenic 50.0%
CATTCCCAGCTAGCAAAGAG+AGG + tig0001799:3753-3772 Msa1338240:CDS 50.0%
TCCAGGAACACTCTTCCACA+AGG + tig0001799:4239-4258 Msa1338240:CDS 50.0%
!! TATTGGGTTTTGTGGCAGCC+TGG - tig0001799:5130-5149 Msa1338240:intergenic 50.0%
CCACTCCCACCTGGTTCAAT+GGG + tig0001799:3445-3464 Msa1338240:CDS 55.0%
TCCCACCTGGTTCAATGGGT+TGG + tig0001799:3449-3468 Msa1338240:CDS 55.0%
GCCAACCCATTGAACCAGGT+GGG - tig0001799:3453-3472 Msa1338240:intergenic 55.0%
!! GCCTTGTGGAAGAGTGTTCC+TGG - tig0001799:4243-4262 Msa1338240:intergenic 55.0%
CCACGTAAGCACACTAGCTG+TGG - tig0001799:4439-4458 Msa1338240:intergenic 55.0%
CCACAGCTAGTGTGCTTACG+TGG + tig0001799:4436-4455 Msa1338240:CDS 55.0%
ATTCGTTGCCAGGACAAGCG+TGG - tig0001799:5178-5197 Msa1338240:intergenic 55.0%
TATGTGCAGGTGGTCTGTGG+AGG + tig0001799:5822-5841 Msa1338240:intron 55.0%
ATGTGCAGGTGGTCTGTGGA+GGG + tig0001799:5823-5842 Msa1338240:intron 55.0%
! CATGACTTGCCACTCCCACC+TGG + tig0001799:3436-3455 Msa1338240:CDS 60.0%
GCCACTCCCACCTGGTTCAA+TGG + tig0001799:3444-3463 Msa1338240:CDS 60.0%
CCCATTGAACCAGGTGGGAG+TGG - tig0001799:3448-3467 Msa1338240:intergenic 60.0%
GGCCAACCCATTGAACCAGG+TGG - tig0001799:3454-3473 Msa1338240:intergenic 60.0%
GCGTGGATCCCACTGCCAAA+TGG - tig0001799:5161-5180 Msa1338240:intergenic 60.0%
AGTGGGATCCACGCTTGTCC+TGG + tig0001799:5167-5186 Msa1338240:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0001799 gene 3191 6408 3191 ID=Msa1338240;Name=Msa1338240
tig0001799 mRNA 3191 6408 3191 ID=Msa1338240-mRNA-1;Parent=Msa1338240;Name=Msa1338240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=75|1|1|1|0.85|0.75|8|484|464
tig0001799 exon 3191 3215 3191 ID=Msa1338240-mRNA-1:exon:1553;Parent=Msa1338240-mRNA-1
tig0001799 exon 3296 3542 3296 ID=Msa1338240-mRNA-1:exon:1554;Parent=Msa1338240-mRNA-1
tig0001799 exon 3646 3961 3646 ID=Msa1338240-mRNA-1:exon:1555;Parent=Msa1338240-mRNA-1
tig0001799 exon 4120 4506 4120 ID=Msa1338240-mRNA-1:exon:1556;Parent=Msa1338240-mRNA-1
tig0001799 exon 4639 4813 4639 ID=Msa1338240-mRNA-1:exon:1557;Parent=Msa1338240-mRNA-1
tig0001799 exon 4916 5022 4916 ID=Msa1338240-mRNA-1:exon:1558;Parent=Msa1338240-mRNA-1
tig0001799 exon 5131 5249 5131 ID=Msa1338240-mRNA-1:exon:1559;Parent=Msa1338240-mRNA-1
tig0001799 exon 5831 6408 5831 ID=Msa1338240-mRNA-1:exon:1560;Parent=Msa1338240-mRNA-1
tig0001799 five_prime_UTR 3191 3215 3191 ID=Msa1338240-mRNA-1:five_prime_utr;Parent=Msa1338240-mRNA-1
tig0001799 five_prime_UTR 3296 3345 3296 ID=Msa1338240-mRNA-1:five_prime_utr;Parent=Msa1338240-mRNA-1
tig0001799 CDS 3346 3542 3346 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 3646 3961 3646 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 4120 4506 4120 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 4639 4813 4639 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 4916 5022 4916 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 5131 5249 5131 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 CDS 5831 5924 5831 ID=Msa1338240-mRNA-1:cds;Parent=Msa1338240-mRNA-1
tig0001799 three_prime_UTR 5925 6408 5925 ID=Msa1338240-mRNA-1:three_prime_utr;Parent=Msa1338240-mRNA-1
Gene Sequence

>Msa1338240

ATGGAACTAAGTATCATGTTATGTTTCTCTACTTCTATTCTCTTCATTGTTCTGTTCAGAATATTCATCAAATCCTTTGTCTCAAAAAGACATGACTTGCCACTCCCACCTGGTTCAATGGGTTGGCCTTACATAGGAGAAACTTTTCAACTTTATTCTCAAGACCCTAATGTCTTCTTTGCATCAAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTGGGATGTCCATGTGTGATGATTTCAAGTCCTGAAGCTGCTAAGTTTGTGTTGAATAAAGCTCAACTTTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATATTTTTTCATCAAGGAGAGTATCATGCTAATTTAAGAAGACTTGTTCTTCGTACTTTCATGCCAGAAGCCATCAGAAATATTGTTCCTGACATTGAATCCATTGCTGAAGATAGTCTTAAATCAATGGAAGGACGTTTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAACGTTGCTCTACTTTCAATTTTTGGAAAAGATGAAATTCACTATAGAGAGCAATTAAAACAATGTTACTACACTCTAGAAAAAGGGTACAATTCAATGCCAATTAATCTTCCAGGAACACTCTTCCACAAGGCAATGAAAGCAAGAAAAGAACTTGCACAGATCTTAGCTCAAATAATCTCAAGTAGGAGAGAGAAGAAACAAGAATACAAAGATTTGTTAGGTTCATTCATGGATGAAAAATCAGGACTAAGTGATGAACAAATAGCAGATAATGTAATTGGAGTTATTTTTGCAGCTCGTGATACCACAGCTAGTGTGCTTACGTGGATTGTTAAGTACCTTGGTGAAAATATCAATGTCCTAGAATCAGTGATTGAGGAACAAGAATCTATATTGAAGAGCAAAGAAGAAAATGGTGAAGAAAAGGGTCTTAATTGGGAAGATACAAAGAAAATGGTTATAACTTCAAGGGTTATTCAAGAGACTCTTAGGGTTGCTTCAATTTTGTCTTTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTGCCATTATTTAGGAATATACATCATAGTCCAAACAACTTCAAAGATCCAGAAAAGTTTGATCCTTCAAGATTTGAGGCTGCCACAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCTGGCAACGAATTAGCCAAGATGGAGATTTTAGTCCTCTTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGAGGGTACAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGATTGCCCATAACATTATATCCTAAGAAGTAG
Protein sequence

>Msa1338240

MELSIMLCFSTSILFIVLFRIFIKSFVSKRHDLPLPPGSMGWPYIGETFQLYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIRNIVPDIESIAEDSLKSMEGRLITTFLEMKTFTFNVALLSIFGKDEIHYREQLKQCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAQIISSRREKKQEYKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWIVKYLGENINVLESVIEEQESILKSKEENGEEKGLNWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEAATKPNTFMPFGSGIHACPGNELAKMEILVLLHHLTTKYRWSVEGTKNGIQYGPFALPQNGLPITLYPKK*