Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345930 | XP_024630929.1 | 80.409 | 342 | 21 | 2 | 34 | 334 | 1 | 337 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345930 | sp|P23923|HBP1B_WHEAT | 56.609 | 348 | 87 | 10 | 34 | 333 | 1 | 332 | 6.75e-114 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345930 | A0A072VS38 | 76.737 | 331 | 35 | 3 | 34 | 327 | 1 | 326 | 4.21e-156 | 463 |
| Msa1345930 | A0A072VS38 | 79.070 | 387 | 23 | 4 | 1 | 334 | 327 | 708 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1345930 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035030 | Msa1345930 | 0.883729 | 3.504933e-71 | -8.615850e-47 |
| Msa0090160 | Msa1345930 | 0.803950 | 2.728871e-49 | -8.615850e-47 |
| Msa0137790 | Msa1345930 | 0.897080 | 1.988213e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345930 | MtrunA17_Chr1g0210151 | 79.480 | 346 | 21 | 3 | 34 | 334 | 1 | 341 | 0.0 | 514 |
| Msa1345930 | MtrunA17_Chr8g0353501 | 56.936 | 346 | 89 | 9 | 34 | 333 | 135 | 466 | 1.96e-117 | 347 |
| Msa1345930 | MtrunA17_Chr5g0422771 | 50.614 | 407 | 118 | 12 | 5 | 333 | 63 | 464 | 3.39e-116 | 343 |
| Msa1345930 | MtrunA17_Chr7g0256211 | 48.974 | 390 | 139 | 7 | 2 | 333 | 65 | 452 | 1.74e-114 | 339 |
| Msa1345930 | MtrunA17_Chr7g0258321 | 46.130 | 323 | 116 | 7 | 69 | 333 | 141 | 463 | 6.68e-88 | 271 |
| Msa1345930 | MtrunA17_Chr1g0174701 | 42.222 | 360 | 156 | 5 | 23 | 333 | 150 | 506 | 2.02e-87 | 271 |
| Msa1345930 | MtrunA17_Chr3g0093451 | 69.000 | 200 | 10 | 4 | 57 | 204 | 10 | 209 | 5.60e-86 | 258 |
| Msa1345930 | MtrunA17_Chr2g0321431 | 46.643 | 283 | 103 | 3 | 92 | 333 | 194 | 469 | 1.12e-81 | 256 |
| Msa1345930 | MtrunA17_Chr3g0124601 | 48.601 | 286 | 100 | 5 | 92 | 333 | 79 | 361 | 2.12e-81 | 251 |
| Msa1345930 | MtrunA17_Chr4g0026401 | 46.048 | 291 | 116 | 5 | 79 | 333 | 176 | 461 | 1.81e-78 | 248 |
| Msa1345930 | MtrunA17_Chr8g0382861 | 43.007 | 286 | 117 | 4 | 91 | 333 | 74 | 356 | 1.05e-71 | 226 |
| Msa1345930 | MtrunA17_Chr3g0115371 | 40.594 | 303 | 127 | 5 | 77 | 331 | 50 | 347 | 1.59e-65 | 210 |
| Msa1345930 | MtrunA17_Chr5g0424861 | 42.807 | 285 | 111 | 6 | 92 | 329 | 67 | 346 | 1.01e-59 | 195 |
| Msa1345930 | MtrunA17_Chr5g0424851 | 45.029 | 171 | 92 | 1 | 159 | 329 | 53 | 221 | 1.55e-41 | 150 |
| Msa1345930 | MtrunA17_Chr5g0424851 | 41.718 | 163 | 92 | 1 | 159 | 321 | 267 | 426 | 2.91e-36 | 135 |
| Msa1345930 | MtrunA17_Chr1g0196951 | 33.146 | 178 | 90 | 6 | 145 | 315 | 74 | 229 | 9.65e-17 | 78.6 |
| Msa1345930 | MtrunA17_Chr2g0315631 | 27.027 | 185 | 101 | 3 | 158 | 322 | 39 | 209 | 3.28e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1345930 | AT1G68640.1 | 57.593 | 349 | 91 | 6 | 30 | 333 | 116 | 452 | 1.06e-109 | 327 |
| Msa1345930 | AT5G06950.2 | 57.006 | 314 | 83 | 8 | 68 | 333 | 21 | 330 | 9.47e-107 | 315 |
| Msa1345930 | AT5G06950.4 | 57.006 | 314 | 83 | 8 | 68 | 333 | 21 | 330 | 9.47e-107 | 315 |
| Msa1345930 | AT5G06950.1 | 57.006 | 314 | 83 | 8 | 68 | 333 | 21 | 330 | 9.47e-107 | 315 |
| Msa1345930 | AT5G06950.5 | 57.006 | 314 | 83 | 8 | 68 | 333 | 21 | 330 | 9.47e-107 | 315 |
| Msa1345930 | AT5G06950.3 | 57.006 | 314 | 83 | 8 | 68 | 333 | 21 | 330 | 9.47e-107 | 315 |
| Msa1345930 | AT3G12250.6 | 52.464 | 345 | 104 | 8 | 34 | 333 | 1 | 330 | 4.16e-106 | 313 |
| Msa1345930 | AT3G12250.2 | 52.464 | 345 | 104 | 8 | 34 | 333 | 1 | 330 | 4.16e-106 | 313 |
| Msa1345930 | AT3G12250.7 | 52.464 | 345 | 104 | 8 | 34 | 333 | 1 | 330 | 4.16e-106 | 313 |
| Msa1345930 | AT3G12250.1 | 52.464 | 345 | 104 | 8 | 34 | 333 | 1 | 330 | 4.16e-106 | 313 |
| Msa1345930 | AT3G12250.5 | 55.629 | 302 | 84 | 5 | 77 | 333 | 7 | 303 | 1.08e-103 | 306 |
| Msa1345930 | AT3G12250.4 | 50.000 | 360 | 115 | 7 | 34 | 333 | 1 | 355 | 1.73e-103 | 308 |
| Msa1345930 | AT3G12250.3 | 55.629 | 302 | 84 | 5 | 77 | 333 | 28 | 324 | 2.45e-103 | 306 |
| Msa1345930 | AT5G06960.2 | 55.363 | 289 | 82 | 4 | 90 | 333 | 44 | 330 | 1.07e-98 | 295 |
| Msa1345930 | AT5G06960.1 | 55.363 | 289 | 82 | 4 | 90 | 333 | 44 | 330 | 1.07e-98 | 295 |
| Msa1345930 | AT5G06960.3 | 55.363 | 289 | 82 | 4 | 90 | 333 | 24 | 310 | 1.66e-98 | 293 |
| Msa1345930 | AT1G08320.2 | 49.662 | 296 | 105 | 5 | 77 | 333 | 39 | 329 | 3.67e-91 | 276 |
| Msa1345930 | AT1G08320.5 | 49.662 | 296 | 105 | 5 | 77 | 333 | 39 | 329 | 3.67e-91 | 276 |
| Msa1345930 | AT1G08320.1 | 44.413 | 349 | 145 | 6 | 29 | 333 | 110 | 453 | 1.60e-89 | 276 |
| Msa1345930 | AT1G08320.4 | 44.413 | 349 | 145 | 6 | 29 | 333 | 110 | 453 | 1.60e-89 | 276 |
| Msa1345930 | AT1G08320.3 | 44.413 | 349 | 145 | 6 | 29 | 333 | 110 | 453 | 1.60e-89 | 276 |
| Msa1345930 | AT5G10030.5 | 47.735 | 287 | 101 | 4 | 92 | 333 | 80 | 362 | 1.93e-81 | 252 |
| Msa1345930 | AT5G10030.3 | 47.735 | 287 | 101 | 4 | 92 | 333 | 80 | 362 | 1.93e-81 | 252 |
| Msa1345930 | AT5G10030.1 | 47.735 | 287 | 101 | 4 | 92 | 333 | 80 | 362 | 1.93e-81 | 252 |
| Msa1345930 | AT5G10030.4 | 47.735 | 287 | 101 | 4 | 92 | 333 | 80 | 362 | 1.93e-81 | 252 |
| Msa1345930 | AT5G10030.2 | 47.735 | 287 | 101 | 4 | 92 | 333 | 80 | 362 | 1.93e-81 | 252 |
| Msa1345930 | AT1G77920.1 | 42.651 | 347 | 150 | 9 | 27 | 333 | 29 | 366 | 3.46e-79 | 246 |
| Msa1345930 | AT5G65210.6 | 46.207 | 290 | 101 | 5 | 92 | 333 | 14 | 296 | 1.58e-77 | 239 |
| Msa1345930 | AT5G06839.2 | 42.810 | 306 | 114 | 5 | 87 | 333 | 113 | 416 | 3.66e-77 | 243 |
| Msa1345930 | AT5G06839.1 | 43.234 | 303 | 116 | 4 | 87 | 333 | 113 | 415 | 4.14e-77 | 242 |
| Msa1345930 | AT5G06839.3 | 43.234 | 303 | 116 | 4 | 87 | 333 | 156 | 458 | 4.51e-77 | 244 |
| Msa1345930 | AT5G65210.5 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT5G65210.7 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT5G65210.3 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT5G65210.1 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT5G65210.2 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT5G65210.4 | 46.207 | 290 | 101 | 5 | 92 | 333 | 84 | 366 | 5.08e-77 | 241 |
| Msa1345930 | AT1G22070.1 | 46.875 | 288 | 106 | 4 | 92 | 334 | 98 | 383 | 7.51e-76 | 238 |
Find 77 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGTATTTCACATACTTTC+TGG | 0.133806 | tig0007816:-12500 | Msa1345930:CDS |
| TTCGAGCTCTTAATTCATTA+TGG | 0.231768 | tig0007816:-8692 | Msa1345930:CDS |
| ATTGTTGGAAACAGTAATTC+AGG | 0.263351 | tig0007816:-12985 | Msa1345930:intron |
| CAATTCCTTTAGTATTCTTT+AGG | 0.266207 | tig0007816:+8660 | None:intergenic |
| GAAAAGTAGGTTAAGGAAAA+AGG | 0.288507 | tig0007816:-13847 | Msa1345930:intron |
| CCGTTCTTCCGAACTTCTTA+AGG | 0.301460 | tig0007816:-12429 | Msa1345930:intron |
| ATGTATTTCACATACTTTCT+GGG | 0.339033 | tig0007816:-12499 | Msa1345930:CDS |
| AAACCACCTTGAGCCGTTAT+CGG | 0.365933 | tig0007816:-9130 | Msa1345930:CDS |
| CTTAGTCTTGCATTGATCCT+TGG | 0.372651 | tig0007816:+14043 | None:intergenic |
| TCATATTCAGGCTATGTGTT+TGG | 0.384585 | tig0007816:-14454 | None:intergenic |
| ATTGGTTCAGCTTCTTCTTC+AGG | 0.387251 | tig0007816:-14293 | Msa1345930:CDS |
| TGGCCATTGCAAGAGCCATT+TGG | 0.388199 | tig0007816:+8956 | None:intergenic |
| TTCACATACTTTCTGGGTTG+TGG | 0.392509 | tig0007816:-12493 | Msa1345930:CDS |
| ACCATGATCCGCTGGAACTC+CGG | 0.404015 | tig0007816:+13014 | None:intergenic |
| TCCTCCACATCCACTGGATC+TGG | 0.420633 | tig0007816:-9000 | Msa1345930:CDS |
| GATCATGGTCATTCAATTGT+TGG | 0.432278 | tig0007816:-13000 | Msa1345930:CDS |
| TAGGGTGCATTTGTTGCAAC+CGG | 0.435060 | tig0007816:-13033 | Msa1345930:CDS |
| CAAAATCACCTTAAGAAGTT+CGG | 0.438279 | tig0007816:+12421 | None:intergenic |
| ACTAGAGACTTTCATTCATC+AGG | 0.451246 | tig0007816:-8923 | Msa1345930:intron |
| AGTGTTTATCCACCGTGTCT+TGG | 0.455646 | tig0007816:-14106 | Msa1345930:CDS |
| TGTGAATATCATCACATTCA+AGG | 0.465804 | tig0007816:-8499 | Msa1345930:three_prime_UTR |
| AGTCTCTAGTGTGGCAAGCT+TGG | 0.468295 | tig0007816:+8936 | None:intergenic |
| GTTGCAAGTAACTTGCAGTA+TGG | 0.469501 | tig0007816:-14406 | Msa1345930:CDS |
| TTCAGCTTCTTCTTCAGGCA+TGG | 0.471184 | tig0007816:-14288 | Msa1345930:CDS |
| CAAGGATCAATGCAAGACTA+AGG | 0.474390 | tig0007816:-14042 | Msa1345930:CDS |
| ATAGGCATATGTGCAACAAT+TGG | 0.478088 | tig0007816:-13215 | Msa1345930:intron |
| TGGAAATGTTGCTGAGTACA+TGG | 0.493141 | tig0007816:-8980 | Msa1345930:CDS |
| CAAGGAGAGCGCGAGCAGCT+TGG | 0.498749 | tig0007816:+8739 | None:intergenic |
| ATCAACTGCTGATCCGATAA+CGG | 0.503931 | tig0007816:+9117 | None:intergenic |
| AATTGGAGAACAGTCGACTT+AGG | 0.507628 | tig0007816:-13198 | Msa1345930:CDS |
| TTTCTTAGGCTGATCTCTTG+AGG | 0.513370 | tig0007816:-8803 | Msa1345930:intron |
| GTGAATATCATCACATTCAA+GGG | 0.518441 | tig0007816:-8498 | Msa1345930:three_prime_UTR |
| ACCGGAGTTCCAGCGGATCA+TGG | 0.518939 | tig0007816:-13015 | Msa1345930:CDS |
| TTATCGGATCAGCAGTTGAT+GGG | 0.521698 | tig0007816:-9114 | Msa1345930:CDS |
| ATTTCCAGATCCAGTGGATG+TGG | 0.524593 | tig0007816:+8996 | None:intergenic |
| CATGTCCTAAAGAATACTAA+AGG | 0.527396 | tig0007816:-8665 | Msa1345930:exon |
| ACACTATCCTCCACATCCAC+TGG | 0.532462 | tig0007816:-9006 | Msa1345930:CDS |
| CACATGAAACATCTTTCTGC+AGG | 0.533251 | tig0007816:+12464 | None:intergenic |
| CTGCAAGGAAAAGTAGGTTA+AGG | 0.538526 | tig0007816:-13854 | Msa1345930:CDS |
| TGCTGAGTACATGGGCCAAA+TGG | 0.539603 | tig0007816:-8971 | Msa1345930:CDS |
| CCTTAAGAAGTTCGGAAGAA+CGG | 0.540585 | tig0007816:+12429 | None:intergenic |
| GTTATCGGATCAGCAGTTGA+TGG | 0.541892 | tig0007816:-9115 | Msa1345930:CDS |
| TCCACCGTGTCTTGGTGCAA+TGG | 0.545619 | tig0007816:-14098 | Msa1345930:CDS |
| TCTTGTAGTTGTTGAATCCA+AGG | 0.547828 | tig0007816:-14060 | Msa1345930:CDS |
| GTTGAAGAGCATAGCTGCAA+AGG | 0.551361 | tig0007816:-12525 | Msa1345930:CDS |
| GTGCAATGGTGTTGGAAATG+AGG | 0.552383 | tig0007816:-14084 | Msa1345930:CDS |
| GGGCCAAATGGCTCTTGCAA+TGG | 0.552891 | tig0007816:-8959 | Msa1345930:CDS |
| GTGAGGCTGCAAGGAAAAGT+AGG | 0.555483 | tig0007816:-13860 | Msa1345930:CDS |
| TGCAGAATCGTGAGGCTGCA+AGG | 0.558257 | tig0007816:-13869 | Msa1345930:CDS |
| AGCGCGAGCAGCTTGGTGCG+CGG | 0.560510 | tig0007816:+8746 | None:intergenic |
| ACTAGTACATATCAATATGT+AGG | 0.562068 | tig0007816:+8553 | None:intergenic |
| GCTGAGGATGCTTTATCTCA+AGG | 0.575247 | tig0007816:-9060 | Msa1345930:CDS |
| ATTGAATGACCATGATCCGC+TGG | 0.583662 | tig0007816:+13006 | None:intergenic |
| GCTGATCCGATAACGGCTCA+AGG | 0.599388 | tig0007816:+9124 | None:intergenic |
| GGATGCTTTATCTCAAGGAA+TGG | 0.606203 | tig0007816:-9055 | Msa1345930:CDS |
| TTGTGTATTGTATAGAACAT+TGG | 0.607394 | tig0007816:-14311 | Msa1345930:intron |
| TGTTGCAACCGGAGTTCCAG+CGG | 0.611050 | tig0007816:-13022 | Msa1345930:CDS |
| GTGTCTTGGTGCAATGGTGT+TGG | 0.611763 | tig0007816:-14092 | Msa1345930:CDS |
| AGCAACATTTCCAGATCCAG+TGG | 0.612783 | tig0007816:+8990 | None:intergenic |
| AAGGATCAATGCAAGACTAA+GGG | 0.612820 | tig0007816:-14041 | Msa1345930:CDS |
| GCATAACTAGTGTGTAGTGT+AGG | 0.616189 | tig0007816:-8633 | Msa1345930:three_prime_UTR |
| GAAAGATGTTTCATGTGGCT+CGG | 0.616317 | tig0007816:-12458 | Msa1345930:CDS |
| GCATTCTTCTCAGCAAGCTG+AGG | 0.619429 | tig0007816:-9076 | Msa1345930:CDS |
| TCCAGATCCAGTGGATGTGG+AGG | 0.620584 | tig0007816:+8999 | None:intergenic |
| AACACCATTGCACCAAGACA+CGG | 0.624897 | tig0007816:+14094 | None:intergenic |
| AAATGAAATCATTTATGACA+AGG | 0.642100 | tig0007816:+8721 | None:intergenic |
| AGATGTTTCATGTGGCTCGG+TGG | 0.642187 | tig0007816:-12455 | Msa1345930:CDS |
| GGGTCAATCTGATGAGCACA+AGG | 0.645680 | tig0007816:-14021 | Msa1345930:intron |
| TATCGGATCAGCAGTTGATG+GGG | 0.649177 | tig0007816:-9113 | Msa1345930:CDS |
| ATGGCAATTAGTTTCAAGCG+TGG | 0.657689 | tig0007816:+8455 | None:intergenic |
| TGAATATCATCACATTCAAG+GGG | 0.658475 | tig0007816:-8497 | Msa1345930:three_prime_UTR |
| TCGGCTGATGCAGAATCGTG+AGG | 0.665525 | tig0007816:-13877 | Msa1345930:CDS |
| CTGCAGAAAGATGTTTCATG+TGG | 0.677608 | tig0007816:-12463 | Msa1345930:CDS |
| GGAAATGTTGCTGAGTACAT+GGG | 0.694330 | tig0007816:-8979 | Msa1345930:CDS |
| ATGAATGAAAGTCTCTAGTG+TGG | 0.704515 | tig0007816:+8927 | None:intergenic |
| ACCATTGCACCAAGACACGG+TGG | 0.708421 | tig0007816:+14097 | None:intergenic |
| GATCCGATAACGGCTCAAGG+TGG | 0.733902 | tig0007816:+9127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATAATTTAAATTTGAAT+TGG | + | tig0007816:8949-8968 | None:intergenic | 10.0% |
| !!! | TAAAATAGAAATTGTATTTT+GGG | - | tig0007816:10595-10614 | Msa1345930:intron | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | - | tig0007816:10822-10841 | Msa1345930:intron | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | - | tig0007816:10822-10841 | Msa1345930:intron | 10.0% |
| !! | TAAATGTTTATAAGTTTGTA+AGG | + | tig0007816:9232-9251 | None:intergenic | 15.0% |
| !!! | TACTGATAAAACATTTTAAT+TGG | - | tig0007816:9569-9588 | Msa1345930:intron | 15.0% |
| !!! | TGCATTTTACAAATTAATTA+TGG | - | tig0007816:10154-10173 | Msa1345930:intron | 15.0% |
| !!! | GTAAAATAGAAATTGTATTT+TGG | - | tig0007816:10594-10613 | Msa1345930:intron | 15.0% |
| !! | AAGTAATTAACTAACTTAAA+TGG | - | tig0007816:10674-10693 | Msa1345930:intron | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | - | tig0007816:10821-10840 | Msa1345930:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | - | tig0007816:10823-10842 | Msa1345930:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | - | tig0007816:10934-10953 | Msa1345930:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | - | tig0007816:10935-10954 | Msa1345930:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | + | tig0007816:10966-10985 | None:intergenic | 15.0% |
| !!! | TATTTTTGAGAAAAAAATAC+AGG | + | tig0007816:11603-11622 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | - | tig0007816:10821-10840 | Msa1345930:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | - | tig0007816:10823-10842 | Msa1345930:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | - | tig0007816:10934-10953 | Msa1345930:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | - | tig0007816:10935-10954 | Msa1345930:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | + | tig0007816:10966-10985 | None:intergenic | 15.0% |
| !! | AAATACAAATGATAATTCTA+TGG | + | tig0007816:12380-12399 | None:intergenic | 15.0% |
| !! | AAATACAAATGATAATTCTA+TGG | + | tig0007816:12380-12399 | None:intergenic | 15.0% |
| !! | TACATAGATATTGAAATAGT+GGG | + | tig0007816:8734-8753 | None:intergenic | 20.0% |
| !! | ATACATAGATATTGAAATAG+TGG | + | tig0007816:8735-8754 | None:intergenic | 20.0% |
| !! | CTACTGATACATTTATTTAT+GGG | - | tig0007816:8978-8997 | Msa1345930:CDS | 20.0% |
| !!! | GTATATTTTAATCTGTCAAA+GGG | - | tig0007816:9465-9484 | Msa1345930:intron | 20.0% |
| !!! | TATATGTTTTGGTTTTGAAT+AGG | - | tig0007816:9667-9686 | Msa1345930:intron | 20.0% |
| !!! | AACTTCAAAGATTTTTCATT+TGG | - | tig0007816:9774-9793 | Msa1345930:intron | 20.0% |
| !!! | GATTTTTCATTTGGTAAAAT+TGG | - | tig0007816:9783-9802 | Msa1345930:intron | 20.0% |
| !! | TAGGAAAGATTATTATAAAG+TGG | - | tig0007816:10623-10642 | Msa1345930:intron | 20.0% |
| !! | TATTATAAAGTGGTTATATC+AGG | - | tig0007816:10633-10652 | Msa1345930:intron | 20.0% |
| !!! | TACTTAGTTTGTTAGTATAT+AGG | + | tig0007816:10659-10678 | None:intergenic | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | - | tig0007816:10795-10814 | Msa1345930:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | - | tig0007816:10796-10815 | Msa1345930:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | + | tig0007816:10967-10986 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | - | tig0007816:10968-10987 | Msa1345930:intron | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | - | tig0007816:10795-10814 | Msa1345930:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | - | tig0007816:10796-10815 | Msa1345930:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | + | tig0007816:10967-10986 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | - | tig0007816:10968-10987 | Msa1345930:intron | 20.0% |
| !! | ATCAACTAATTGTTAGATAT+AGG | - | tig0007816:12058-12077 | Msa1345930:intron | 20.0% |
| !! | GAGATTATTGCATAATAATA+AGG | + | tig0007816:12350-12369 | None:intergenic | 20.0% |
| !! | ATGATAATTCTATGGTATTT+GGG | + | tig0007816:12372-12391 | None:intergenic | 20.0% |
| !! | AATGATAATTCTATGGTATT+TGG | + | tig0007816:12373-12392 | None:intergenic | 20.0% |
| !! | GAGATTATTGCATAATAATA+AGG | + | tig0007816:12350-12369 | None:intergenic | 20.0% |
| !! | ATGATAATTCTATGGTATTT+GGG | + | tig0007816:12372-12391 | None:intergenic | 20.0% |
| !! | AATGATAATTCTATGGTATT+TGG | + | tig0007816:12373-12392 | None:intergenic | 20.0% |
| !! | TAAATAGTTATGTTAGATAC+TGG | + | tig0007816:13688-13707 | None:intergenic | 20.0% |
| !! | AAATGAAATCATTTATGACA+AGG | + | tig0007816:14182-14201 | None:intergenic | 20.0% |
| ! | TTGTGTATTGTATAGAACAT+TGG | - | tig0007816:8589-8608 | Msa1345930:three_prime_UTR | 25.0% |
| ! | TGGATAAACACTGAAAAATA+AGG | + | tig0007816:8786-8805 | None:intergenic | 25.0% |
| ! | GCTACTGATACATTTATTTA+TGG | - | tig0007816:8977-8996 | Msa1345930:CDS | 25.0% |
| !!! | TTTATGGGTTACATTTTCTT+AGG | - | tig0007816:8993-9012 | Msa1345930:CDS | 25.0% |
| !! | AACCTTCTGAAAAATTGTTA+TGG | - | tig0007816:9281-9300 | Msa1345930:intron | 25.0% |
| !!! | TGATCATCTAATTTGACTTT+TGG | - | tig0007816:9380-9399 | Msa1345930:intron | 25.0% |
| !!! | GATCATCTAATTTGACTTTT+GGG | - | tig0007816:9381-9400 | Msa1345930:intron | 25.0% |
| !!! | GGTATATTTTAATCTGTCAA+AGG | - | tig0007816:9464-9483 | Msa1345930:intron | 25.0% |
| !!! | TGAAAAATCTTTGAAGTTGT+TGG | + | tig0007816:9772-9791 | None:intergenic | 25.0% |
| !!! | CATTCTACTTATTTTTTCCA+TGG | - | tig0007816:9829-9848 | Msa1345930:intron | 25.0% |
| !!! | ATGAAGTATTTTAAACCTTC+AGG | - | tig0007816:10199-10218 | Msa1345930:intron | 25.0% |
| ! | ATCAGCTATAAATTCTCAAA+TGG | - | tig0007816:10291-10310 | Msa1345930:intron | 25.0% |
| ! | ATGTATTTCACATACTTTCT+GGG | - | tig0007816:10401-10420 | Msa1345930:intron | 25.0% |
| !!! | ATTTTAGTGTTAAGCTAAGA+TGG | + | tig0007816:10515-10534 | None:intergenic | 25.0% |
| !!! | AATTGTATTTTGGGATGAAT+AGG | - | tig0007816:10604-10623 | Msa1345930:intron | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | - | tig0007816:10751-10770 | Msa1345930:intron | 25.0% |
| !!! | ATTTATTTGGCGTTTTAAAC+CGG | - | tig0007816:11249-11268 | Msa1345930:intron | 25.0% |
| ! | TTGCAATAAAGAAATGAGTA+TGG | - | tig0007816:11531-11550 | Msa1345930:intron | 25.0% |
| ! | TGCAATAAAGAAATGAGTAT+GGG | - | tig0007816:11532-11551 | Msa1345930:intron | 25.0% |
| !! | TGTCATTATACTTCAAGTTA+TGG | - | tig0007816:11680-11699 | Msa1345930:intron | 25.0% |
| !! | GTCATTATACTTCAAGTTAT+GGG | - | tig0007816:11681-11700 | Msa1345930:intron | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | - | tig0007816:10751-10770 | Msa1345930:intron | 25.0% |
| ! | GATTATAAATAAAGATGCAG+AGG | - | tig0007816:12196-12215 | Msa1345930:intron | 25.0% |
| ! | AAAATTCAGTCAGAAAATGA+AGG | - | tig0007816:12842-12861 | Msa1345930:intron | 25.0% |
| ! | AATGAAGGAAAAAGAAATGA+AGG | - | tig0007816:12857-12876 | Msa1345930:intron | 25.0% |
| ! | ATGAAGGAAAAAGAAATGAA+GGG | - | tig0007816:12858-12877 | Msa1345930:intron | 25.0% |
| ! | AGAGAAATTTCAGATATAGA+AGG | - | tig0007816:12920-12939 | Msa1345930:intron | 25.0% |
| ! | GAGAAATTTCAGATATAGAA+GGG | - | tig0007816:12921-12940 | Msa1345930:intron | 25.0% |
| !!! | TCTGTTTTGAGTAGTATTTT+TGG | + | tig0007816:13188-13207 | None:intergenic | 25.0% |
| ! | GATTATAAATAAAGATGCAG+AGG | - | tig0007816:12196-12215 | Msa1345930:intron | 25.0% |
| !!! | TTGTGAACATTGTTTTTCTT+AGG | - | tig0007816:14083-14102 | Msa1345930:CDS | 25.0% |
| ! | CAATTCCTTTAGTATTCTTT+AGG | + | tig0007816:14243-14262 | None:intergenic | 25.0% |
| ! | ATCAGTAGTTAAGAAAAACA+AGG | + | tig0007816:14320-14339 | None:intergenic | 25.0% |
| ! | ACTAGTACATATCAATATGT+AGG | + | tig0007816:14350-14369 | None:intergenic | 25.0% |
| ACACAACATTGAATCAGATA+AGG | + | tig0007816:8575-8594 | None:intergenic | 30.0% | |
| AAAGATGGTTGAAATGTACT+TGG | + | tig0007816:8702-8721 | None:intergenic | 30.0% | |
| TACATTTGATGTATGAAGAG+TGG | - | tig0007816:8754-8773 | Msa1345930:CDS | 30.0% | |
| GAAAAGTAGGTTAAGGAAAA+AGG | - | tig0007816:9053-9072 | Msa1345930:CDS | 30.0% | |
| AAGACAAATCATAAGTTAGG+AGG | + | tig0007816:9092-9111 | None:intergenic | 30.0% | |
| CACAAGACAAATCATAAGTT+AGG | + | tig0007816:9095-9114 | None:intergenic | 30.0% | |
| GTTAACCCAAAAAAAGAACA+TGG | + | tig0007816:9200-9219 | None:intergenic | 30.0% | |
| !!! | TCTAATTTGACTTTTGGGAT+TGG | - | tig0007816:9386-9405 | Msa1345930:intron | 30.0% |
| AGATTAAAATATACCAGAGC+AGG | + | tig0007816:9459-9478 | None:intergenic | 30.0% | |
| TAATTGGACCTTTCTCTAAA+AGG | - | tig0007816:9585-9604 | Msa1345930:intron | 30.0% | |
| ! | CTGGACTAAGTTATATGTTT+TGG | - | tig0007816:9656-9675 | Msa1345930:intron | 30.0% |
| ATTGTTGGAAACAGTAATTC+AGG | - | tig0007816:9915-9934 | Msa1345930:intron | 30.0% | |
| TCCTTAGAACTAATCATTCT+TGG | - | tig0007816:10069-10088 | Msa1345930:intron | 30.0% | |
| !! | ACCAAGAATGATTAGTTCTA+AGG | + | tig0007816:10073-10092 | None:intergenic | 30.0% |
| GCAACAAAATAGATGATCAA+TGG | - | tig0007816:10095-10114 | Msa1345930:intron | 30.0% | |
| AATGGACACTTAAATTCATG+CGG | - | tig0007816:10113-10132 | Msa1345930:intron | 30.0% | |
| GATGTATTTCACATACTTTC+TGG | - | tig0007816:10400-10419 | Msa1345930:intron | 30.0% | |
| CAAAATCACCTTAAGAAGTT+CGG | + | tig0007816:10482-10501 | None:intergenic | 30.0% | |
| ! | GTGAAAAGTTTCAAAAGTGT+CGG | - | tig0007816:10568-10587 | Msa1345930:intron | 30.0% |
| ATAATATTGCAGAACTTCGA+GGG | + | tig0007816:10922-10941 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | + | tig0007816:10923-10942 | None:intergenic | 30.0% | |
| GCAATAAAGAAATGAGTATG+GGG | - | tig0007816:11533-11552 | Msa1345930:intron | 30.0% | |
| ACAAACAGAGTATATGATCA+AGG | - | tig0007816:11628-11647 | Msa1345930:intron | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | + | tig0007816:10922-10941 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | + | tig0007816:10923-10942 | None:intergenic | 30.0% | |
| ATTCTATAACTTATGCCCTT+AGG | + | tig0007816:12087-12106 | None:intergenic | 30.0% | |
| AAATAAAGATGCAGAGGAAA+AGG | - | tig0007816:12202-12221 | Msa1345930:intron | 30.0% | |
| AATAAAGATGCAGAGGAAAA+GGG | - | tig0007816:12203-12222 | Msa1345930:intron | 30.0% | |
| ! | ACATTGGGTATTTTGTATGT+GGG | - | tig0007816:12229-12248 | Msa1345930:intron | 30.0% |
| ATAAGAAAGTAACTGCAGAA+AGG | + | tig0007816:12300-12319 | None:intergenic | 30.0% | |
| GTTCATTTGATGTTCAACAA+GGG | - | tig0007816:12771-12790 | Msa1345930:intron | 30.0% | |
| AGATATAGAAGGGAAAATGA+CGG | - | tig0007816:12931-12950 | Msa1345930:intron | 30.0% | |
| ! | TTTTCTCCATCAAAAGACAT+TGG | + | tig0007816:13135-13154 | None:intergenic | 30.0% |
| ! | AATGTCTTTTGATGGAGAAA+AGG | - | tig0007816:13134-13153 | Msa1345930:intron | 30.0% |
| ATTCTATAACTTATGCCCTT+AGG | + | tig0007816:12087-12106 | None:intergenic | 30.0% | |
| AAATAAAGATGCAGAGGAAA+AGG | - | tig0007816:12202-12221 | Msa1345930:intron | 30.0% | |
| AATAAAGATGCAGAGGAAAA+GGG | - | tig0007816:12203-12222 | Msa1345930:intron | 30.0% | |
| ! | ACATTGGGTATTTTGTATGT+GGG | - | tig0007816:12229-12248 | Msa1345930:intron | 30.0% |
| ATAAGAAAGTAACTGCAGAA+AGG | + | tig0007816:12300-12319 | None:intergenic | 30.0% | |
| AAGAAAAAACAAATGCGAAG+AGG | + | tig0007816:13730-13749 | None:intergenic | 30.0% | |
| TGATCACACTCAATTAATTG+TGG | + | tig0007816:14052-14071 | None:intergenic | 30.0% | |
| TTCGAGCTCTTAATTCATTA+TGG | - | tig0007816:14208-14227 | Msa1345930:intron | 30.0% | |
| CATGTCCTAAAGAATACTAA+AGG | - | tig0007816:14235-14254 | Msa1345930:CDS | 30.0% | |
| TGTGAATATCATCACATTCA+AGG | - | tig0007816:14401-14420 | Msa1345930:CDS | 30.0% | |
| GTGAATATCATCACATTCAA+GGG | - | tig0007816:14402-14421 | Msa1345930:CDS | 30.0% | |
| TGAATATCATCACATTCAAG+GGG | - | tig0007816:14403-14422 | Msa1345930:CDS | 30.0% | |
| AGTGGGAAAAGATCAAAAGA+TGG | + | tig0007816:8717-8736 | None:intergenic | 35.0% | |
| TCTTGTAGTTGTTGAATCCA+AGG | - | tig0007816:8840-8859 | Msa1345930:intron | 35.0% | |
| AAGGATCAATGCAAGACTAA+GGG | - | tig0007816:8859-8878 | Msa1345930:intron | 35.0% | |
| GCACAAAGTCACAATAAAAG+TGG | + | tig0007816:8923-8942 | None:intergenic | 35.0% | |
| !!! | CAGCTCCATGTTCTTTTTTT+GGG | - | tig0007816:9192-9211 | Msa1345930:intron | 35.0% |
| !! | GGCCATAACAATTTTTCAGA+AGG | + | tig0007816:9286-9305 | None:intergenic | 35.0% |
| CTGAAAAATTGTTATGGCCA+AGG | - | tig0007816:9287-9306 | Msa1345930:intron | 35.0% | |
| !!! | ATTTTGTTTTCTTCCTGCTC+TGG | - | tig0007816:9443-9462 | Msa1345930:intron | 35.0% |
| !! | GATGTCTTCCTTTTAGAGAA+AGG | + | tig0007816:9596-9615 | None:intergenic | 35.0% |
| TTCGTACGATATAGCATTAC+TGG | - | tig0007816:9637-9656 | Msa1345930:intron | 35.0% | |
| ATAGGCATATGTGCAACAAT+TGG | - | tig0007816:9685-9704 | Msa1345930:intron | 35.0% | |
| GATCATGGTCATTCAATTGT+TGG | - | tig0007816:9900-9919 | Msa1345930:intron | 35.0% | |
| TGTGAAGGAAATGAAACTCA+AGG | + | tig0007816:9954-9973 | None:intergenic | 35.0% | |
| AGGTGCATTAGCATTTGATA+TGG | - | tig0007816:10219-10238 | Msa1345930:intron | 35.0% | |
| ! | TTGATATGGATTATGCTCGT+TGG | - | tig0007816:10233-10252 | Msa1345930:intron | 35.0% |
| ! | TGATATGGATTATGCTCGTT+GGG | - | tig0007816:10234-10253 | Msa1345930:intron | 35.0% |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | - | tig0007816:10799-10818 | Msa1345930:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | - | tig0007816:10831-10850 | Msa1345930:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | - | tig0007816:10832-10851 | Msa1345930:intron | 35.0% | |
| ! | ATCAGTTGGTTTCTATCAAC+TGG | - | tig0007816:10982-11001 | Msa1345930:intron | 35.0% |
| TGTTCTCGCTTGCATTTATT+TGG | - | tig0007816:11236-11255 | Msa1345930:intron | 35.0% | |
| GATAGGAAAAGAGAAAGGTT+TGG | - | tig0007816:11402-11421 | Msa1345930:intron | 35.0% | |
| AGGTTTGGAAGATGTAGAAA+TGG | - | tig0007816:11417-11436 | Msa1345930:intron | 35.0% | |
| GGTTTGGAAGATGTAGAAAT+GGG | - | tig0007816:11418-11437 | Msa1345930:intron | 35.0% | |
| GTTTGGAAGATGTAGAAATG+GGG | - | tig0007816:11419-11438 | Msa1345930:intron | 35.0% | |
| CACAATCATGACATGCATAT+GGG | + | tig0007816:11470-11489 | None:intergenic | 35.0% | |
| AATGGAACAGGAGAACAAAA+CGG | - | tig0007816:11492-11511 | Msa1345930:intron | 35.0% | |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | - | tig0007816:10799-10818 | Msa1345930:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | - | tig0007816:10831-10850 | Msa1345930:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | - | tig0007816:10832-10851 | Msa1345930:intron | 35.0% | |
| TGTTAGATATAGGACTCCTA+AGG | - | tig0007816:12068-12087 | Msa1345930:intron | 35.0% | |
| GTTAGATATAGGACTCCTAA+GGG | - | tig0007816:12069-12088 | Msa1345930:intron | 35.0% | |
| TGTAACTGCTATAGTGAGTT+AGG | - | tig0007816:12174-12193 | Msa1345930:intron | 35.0% | |
| ! | GACATTGGGTATTTTGTATG+TGG | - | tig0007816:12228-12247 | Msa1345930:intron | 35.0% |
| !!! | ATTTTGTATGTGGGTTGGTT+TGG | - | tig0007816:12238-12257 | Msa1345930:intron | 35.0% |
| !!! | TTTTGTATGTGGGTTGGTTT+GGG | - | tig0007816:12239-12258 | Msa1345930:intron | 35.0% |
| ATTTCTGCCATAACATACCA+CGG | + | tig0007816:12455-12474 | None:intergenic | 35.0% | |
| ! | TGGTTTAAAACGCCACAAAA+AGG | + | tig0007816:12675-12694 | None:intergenic | 35.0% |
| TCCTCTTCTTCATCATGTAT+AGG | + | tig0007816:12716-12735 | None:intergenic | 35.0% | |
| TATTCAATCGAAGTCGTTGA+CGG | - | tig0007816:12742-12761 | Msa1345930:intron | 35.0% | |
| GGTTCATTTGATGTTCAACA+AGG | - | tig0007816:12770-12789 | Msa1345930:intron | 35.0% | |
| GAAAAACGTTCTGATTGAGT+TGG | - | tig0007816:12805-12824 | Msa1345930:intron | 35.0% | |
| ! | TGTCACTCTACTTCAAGTTA+TGG | - | tig0007816:13251-13270 | Msa1345930:intron | 35.0% |
| ! | GTCACTCTACTTCAAGTTAT+GGG | - | tig0007816:13252-13271 | Msa1345930:intron | 35.0% |
| TTATGTTATCCTTCACCTTG+AGG | - | tig0007816:13289-13308 | Msa1345930:intron | 35.0% | |
| !! | AGGGGAGTATTGTTAGATAT+AGG | - | tig0007816:13330-13349 | Msa1345930:intron | 35.0% |
| TGTTAGATATAGGACTCCTA+AGG | - | tig0007816:12068-12087 | Msa1345930:intron | 35.0% | |
| GTTAGATATAGGACTCCTAA+GGG | - | tig0007816:12069-12088 | Msa1345930:intron | 35.0% | |
| ! | GACATTGGGTATTTTGTATG+TGG | - | tig0007816:12228-12247 | Msa1345930:intron | 35.0% |
| !!! | ATTTTGTATGTGGGTTGGTT+TGG | - | tig0007816:12238-12257 | Msa1345930:intron | 35.0% |
| !!! | TTTTGTATGTGGGTTGGTTT+GGG | - | tig0007816:12239-12258 | Msa1345930:intron | 35.0% |
| AAAAACAAATGCGAAGAGGA+AGG | + | tig0007816:13726-13745 | None:intergenic | 35.0% | |
| ATGAATGAAAGTCTCTAGTG+TGG | + | tig0007816:13976-13995 | None:intergenic | 35.0% | |
| ACTAGAGACTTTCATTCATC+AGG | - | tig0007816:13977-13996 | Msa1345930:intron | 35.0% | |
| ! | GTTGCAAGTAACTTGCAGTA+TGG | - | tig0007816:8494-8513 | Msa1345930:three_prime_UTR | 40.0% |
| ! | ATTGGTTCAGCTTCTTCTTC+AGG | - | tig0007816:8607-8626 | Msa1345930:three_prime_UTR | 40.0% |
| !! | CTTAGTCTTGCATTGATCCT+TGG | + | tig0007816:8860-8879 | None:intergenic | 40.0% |
| CAAGGATCAATGCAAGACTA+AGG | - | tig0007816:8858-8877 | Msa1345930:intron | 40.0% | |
| ! | CATTTTCTTAGGCTCTTCGT+CGG | - | tig0007816:9004-9023 | Msa1345930:CDS | 40.0% |
| CTGCAAGGAAAAGTAGGTTA+AGG | - | tig0007816:9046-9065 | Msa1345930:CDS | 40.0% | |
| CCAAAAAAAGAACATGGAGC+TGG | + | tig0007816:9194-9213 | None:intergenic | 40.0% | |
| !!! | CCAGCTCCATGTTCTTTTTT+TGG | - | tig0007816:9191-9210 | Msa1345930:intron | 40.0% |
| TTGTTATGGCCAAGGACATA+AGG | - | tig0007816:9295-9314 | Msa1345930:intron | 40.0% | |
| ACACTCTTACCTTATGTCCT+TGG | + | tig0007816:9307-9326 | None:intergenic | 40.0% | |
| ! | AATTGGAGAACAGTCGACTT+AGG | - | tig0007816:9702-9721 | Msa1345930:intron | 40.0% |
| TATAGGGGAAAAGCAATCCA+TGG | + | tig0007816:9849-9868 | None:intergenic | 40.0% | |
| !! | ATGGATTGCTTTTCCCCTAT+AGG | - | tig0007816:9848-9867 | Msa1345930:intron | 40.0% |
| !! | TGGATTGCTTTTCCCCTATA+GGG | - | tig0007816:9849-9868 | Msa1345930:intron | 40.0% |
| TGCAACAAATGCACCCTATA+GGG | + | tig0007816:9865-9884 | None:intergenic | 40.0% | |
| TTGCAACAAATGCACCCTAT+AGG | + | tig0007816:9866-9885 | None:intergenic | 40.0% | |
| GAGTTTCATTTCCTTCACAG+TGG | - | tig0007816:9955-9974 | Msa1345930:intron | 40.0% | |
| TCAAATGCTAATGCACCTGA+AGG | + | tig0007816:10217-10236 | None:intergenic | 40.0% | |
| GAACTGCATCTTCTTGTTGA+AGG | - | tig0007816:10322-10341 | Msa1345930:intron | 40.0% | |
| TTCACATACTTTCTGGGTTG+TGG | - | tig0007816:10407-10426 | Msa1345930:intron | 40.0% | |
| CACATGAAACATCTTTCTGC+AGG | + | tig0007816:10439-10458 | None:intergenic | 40.0% | |
| CTGCAGAAAGATGTTTCATG+TGG | - | tig0007816:10437-10456 | Msa1345930:intron | 40.0% | |
| GAAAGATGTTTCATGTGGCT+CGG | - | tig0007816:10442-10461 | Msa1345930:intron | 40.0% | |
| CCTTAAGAAGTTCGGAAGAA+CGG | + | tig0007816:10474-10493 | None:intergenic | 40.0% | |
| GAACTCCATTTCTGCCATAA+CGG | + | tig0007816:11038-11057 | None:intergenic | 40.0% | |
| CTTCTTTGCCATCAAACACT+CGG | + | tig0007816:11060-11079 | None:intergenic | 40.0% | |
| ATGGCAAAGAAGATGCATAC+TGG | - | tig0007816:11068-11087 | Msa1345930:intron | 40.0% | |
| TCTGTCAGTTTCTCTTCATC+TGG | + | tig0007816:11136-11155 | None:intergenic | 40.0% | |
| TATGCCAACTAACCTGTTGA+TGG | + | tig0007816:11216-11235 | None:intergenic | 40.0% | |
| !! | GGCGTTTTAAACCGGAATAT+CGG | - | tig0007816:11257-11276 | Msa1345930:intron | 40.0% |
| !! | GCGTTTTAAACCGGAATATC+GGG | - | tig0007816:11258-11277 | Msa1345930:intron | 40.0% |
| TCCTCTTCTTCATCAGACAT+AGG | + | tig0007816:11292-11311 | None:intergenic | 40.0% | |
| AGAGGAACCTGAAACTGAAT+TGG | - | tig0007816:11306-11325 | Msa1345930:intron | 40.0% | |
| AACCTGAAACTGAATTGGAC+CGG | - | tig0007816:11311-11330 | Msa1345930:intron | 40.0% | |
| ! | ACCTTTCTCTTTTCCTATCG+CGG | + | tig0007816:11401-11420 | None:intergenic | 40.0% |
| CCACAATCATGACATGCATA+TGG | + | tig0007816:11471-11490 | None:intergenic | 40.0% | |
| CCATATGCATGTCATGATTG+TGG | - | tig0007816:11468-11487 | Msa1345930:intron | 40.0% | |
| GCATGTCATGATTGTGGAAA+TGG | - | tig0007816:11474-11493 | Msa1345930:intron | 40.0% | |
| CATGATTGTGGAAATGGAAC+AGG | - | tig0007816:11480-11499 | Msa1345930:intron | 40.0% | |
| AGAGATAAGGGGAACTACTA+TGG | - | tig0007816:11558-11577 | Msa1345930:intron | 40.0% | |
| GAGATAAGGGGAACTACTAT+GGG | - | tig0007816:11559-11578 | Msa1345930:intron | 40.0% | |
| ATACAGGATGATTGATGTCG+TGG | + | tig0007816:11587-11606 | None:intergenic | 40.0% | |
| GATATCATAAGTGTCCACCT+GGG | + | tig0007816:11708-11727 | None:intergenic | 40.0% | |
| TTATGATATCCTCCACCTTG+AGG | - | tig0007816:11718-11737 | Msa1345930:intron | 40.0% | |
| AAAGATTCACCTTGTCCTCA+AGG | + | tig0007816:11736-11755 | None:intergenic | 40.0% | |
| TGAGGACAAGGTGAATCTTT+AGG | - | tig0007816:11736-11755 | Msa1345930:intron | 40.0% | |
| GAGGACAAGGTGAATCTTTA+GGG | - | tig0007816:11737-11756 | Msa1345930:intron | 40.0% | |
| AGGACAAGGTGAATCTTTAG+GGG | - | tig0007816:11738-11757 | Msa1345930:intron | 40.0% | |
| ! | TGGGTATTTTGTATGTGGGT+TGG | - | tig0007816:12233-12252 | Msa1345930:intron | 40.0% |
| TCTGAACCAGTATCTAACAC+TGG | - | tig0007816:12407-12426 | Msa1345930:intron | 40.0% | |
| CTGATACCAGTGTTAGATAC+TGG | + | tig0007816:12416-12435 | None:intergenic | 40.0% | |
| GTGGTATGTTATGGCAGAAA+TGG | - | tig0007816:12454-12473 | Msa1345930:CDS | 40.0% | |
| ! | ATGGAGTTTCGAGTGTTTGA+AGG | - | tig0007816:12473-12492 | Msa1345930:CDS | 40.0% |
| TACACCAGAGACAGAGAAAT+TGG | - | tig0007816:12553-12572 | Msa1345930:CDS | 40.0% | |
| AATGATTGCCAACTTGCATG+TGG | + | tig0007816:12644-12663 | None:intergenic | 40.0% | |
| GCCTATACATGATGAAGAAG+AGG | - | tig0007816:12712-12731 | Msa1345930:intron | 40.0% | |
| TTCAACAAGGGACTAACCAA+CGG | - | tig0007816:12783-12802 | Msa1345930:intron | 40.0% | |
| ! | CAATCAGAACGTTTTTCCGT+TGG | + | tig0007816:12802-12821 | None:intergenic | 40.0% |
| !! | GATTGAGTTGGAAGAAGACA+AGG | - | tig0007816:12817-12836 | Msa1345930:intron | 40.0% |
| TCCATTGCAGAACCATTGAA+AGG | - | tig0007816:12881-12900 | Msa1345930:intron | 40.0% | |
| CCATTGCAGAACCATTGAAA+GGG | - | tig0007816:12882-12901 | Msa1345930:intron | 40.0% | |
| !! | ACCATTGAAAGGGTGTTTGA+AGG | - | tig0007816:12892-12911 | Msa1345930:intron | 40.0% |
| TCCTTCAAACACCCTTTCAA+TGG | + | tig0007816:12896-12915 | None:intergenic | 40.0% | |
| AGATGTCGAAGAAGAAGTCA+AGG | - | tig0007816:12964-12983 | Msa1345930:intron | 40.0% | |
| TCAGGATGCAGAAAAGATGA+AGG | - | tig0007816:12988-13007 | Msa1345930:CDS | 40.0% | |
| CAGGATGCAGAAAAGATGAA+GGG | - | tig0007816:12989-13008 | Msa1345930:CDS | 40.0% | |
| AGGATGCAGAAAAGATGAAG+GGG | - | tig0007816:12990-13009 | Msa1345930:CDS | 40.0% | |
| TCATTTCAGGATTCTGCTGT+TGG | - | tig0007816:13080-13099 | Msa1345930:intron | 40.0% | |
| ! | GAATTCCGACAACCATTTTG+AGG | - | tig0007816:13102-13121 | Msa1345930:intron | 40.0% |
| !!! | GTATTTTTGGCCCAGAAAGA+GGG | + | tig0007816:13175-13194 | None:intergenic | 40.0% |
| !!! | AGTATTTTTGGCCCAGAAAG+AGG | + | tig0007816:13176-13195 | None:intergenic | 40.0% |
| CAAAACAGAGTGTATGATCC+AGG | - | tig0007816:13199-13218 | Msa1345930:CDS | 40.0% | |
| TGAAGTAGAGTGACAGATCA+AGG | + | tig0007816:13246-13265 | None:intergenic | 40.0% | |
| ! | TACTTCAAGTTATGGGATCC+TGG | - | tig0007816:13259-13278 | Msa1345930:intron | 40.0% |
| AAAGATTCACCTTGTCCTCA+AGG | + | tig0007816:11736-11755 | None:intergenic | 40.0% | |
| TGAGGACAAGGTGAATCTTT+AGG | - | tig0007816:11736-11755 | Msa1345930:intron | 40.0% | |
| ! | GACAAGGTGAATCTTTAGGA+GGG | - | tig0007816:13311-13330 | Msa1345930:intron | 40.0% |
| ! | ACAAGGTGAATCTTTAGGAG+GGG | - | tig0007816:13312-13331 | Msa1345930:intron | 40.0% |
| ! | TGGGTATTTTGTATGTGGGT+TGG | - | tig0007816:12233-12252 | Msa1345930:intron | 40.0% |
| ATCAACTGCTGATCCGATAA+CGG | + | tig0007816:13786-13805 | None:intergenic | 40.0% | |
| TTATCGGATCAGCAGTTGAT+GGG | - | tig0007816:13786-13805 | Msa1345930:intron | 40.0% | |
| GGATGCTTTATCTCAAGGAA+TGG | - | tig0007816:13845-13864 | Msa1345930:intron | 40.0% | |
| TGGAAATGTTGCTGAGTACA+TGG | - | tig0007816:13920-13939 | Msa1345930:intron | 40.0% | |
| GGAAATGTTGCTGAGTACAT+GGG | - | tig0007816:13921-13940 | Msa1345930:intron | 40.0% | |
| TTTCTTAGGCTGATCTCTTG+AGG | - | tig0007816:14097-14116 | Msa1345930:CDS | 40.0% | |
| GCATAACTAGTGTGTAGTGT+AGG | - | tig0007816:14267-14286 | Msa1345930:CDS | 40.0% | |
| TTCAGCTTCTTCTTCAGGCA+TGG | - | tig0007816:8612-8631 | Msa1345930:three_prime_UTR | 45.0% | |
| AGTGTTTATCCACCGTGTCT+TGG | - | tig0007816:8794-8813 | Msa1345930:CDS | 45.0% | |
| AACACCATTGCACCAAGACA+CGG | + | tig0007816:8809-8828 | None:intergenic | 45.0% | |
| ! | GTGCAATGGTGTTGGAAATG+AGG | - | tig0007816:8816-8835 | Msa1345930:intron | 45.0% |
| GCTTCAACAAGTACGTCAAC+AGG | - | tig0007816:9745-9764 | Msa1345930:intron | 45.0% | |
| GCAACAAATGCACCCTATAG+GGG | + | tig0007816:9864-9883 | None:intergenic | 45.0% | |
| ! | TAGGGTGCATTTGTTGCAAC+CGG | - | tig0007816:9867-9886 | Msa1345930:intron | 45.0% |
| ATTGAATGACCATGATCCGC+TGG | + | tig0007816:9897-9916 | None:intergenic | 45.0% | |
| ! | CCATGTTTCTACCACTGTGA+AGG | + | tig0007816:9969-9988 | None:intergenic | 45.0% |
| CCTTCACAGTGGTAGAAACA+TGG | - | tig0007816:9966-9985 | Msa1345930:intron | 45.0% | |
| ! | GTTGAAGAGCATAGCTGCAA+AGG | - | tig0007816:10375-10394 | Msa1345930:intron | 45.0% |
| CCGTTCTTCCGAACTTCTTA+AGG | - | tig0007816:10471-10490 | Msa1345930:intron | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | - | tig0007816:10868-10887 | Msa1345930:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | - | tig0007816:10869-10888 | Msa1345930:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | - | tig0007816:10887-10906 | Msa1345930:intron | 45.0% |
| TGGTATCAGAGCAACGATCT+CGG | - | tig0007816:11002-11021 | Msa1345930:intron | 45.0% | |
| TTTCTGCCATAACGGTACCA+CGG | + | tig0007816:11030-11049 | None:intergenic | 45.0% | |
| TGGTACCGTTATGGCAGAAA+TGG | - | tig0007816:11030-11049 | Msa1345930:intron | 45.0% | |
| ATGGAGTTCCGAGTGTTTGA+TGG | - | tig0007816:11049-11068 | Msa1345930:intron | 45.0% | |
| GCAAAGAAGATGCATACTGG+TGG | - | tig0007816:11071-11090 | Msa1345930:intron | 45.0% | |
| ! | GATGCGTTGATGTTACTCAG+AGG | - | tig0007816:11154-11173 | Msa1345930:intron | 45.0% |
| GGCATGATATCCCGATATTC+CGG | + | tig0007816:11271-11290 | None:intergenic | 45.0% | |
| GCCTATGTCTGATGAAGAAG+AGG | - | tig0007816:11288-11307 | Msa1345930:intron | 45.0% | |
| AACCGGTCCAATTCAGTTTC+AGG | + | tig0007816:11316-11335 | None:intergenic | 45.0% | |
| ATGAACCTTGAGTCGTCAAC+CGG | + | tig0007816:11333-11352 | None:intergenic | 45.0% | |
| TCAACCACAAGATAGTGACC+AGG | - | tig0007816:11360-11379 | Msa1345930:intron | 45.0% | |
| CAACCACAAGATAGTGACCA+GGG | - | tig0007816:11361-11380 | Msa1345930:intron | 45.0% | |
| TTTCCCTGGTCACTATCTTG+TGG | + | tig0007816:11367-11386 | None:intergenic | 45.0% | |
| ! | TTCTCTTTTCCTATCGCGGT+GGG | + | tig0007816:11397-11416 | None:intergenic | 45.0% |
| ! | TTTCTCTTTTCCTATCGCGG+TGG | + | tig0007816:11398-11417 | None:intergenic | 45.0% |
| ACCGCGATAGGAAAAGAGAA+AGG | - | tig0007816:11397-11416 | Msa1345930:intron | 45.0% | |
| TGAGTATGGGGTCAGAGATA+AGG | - | tig0007816:11545-11564 | Msa1345930:intron | 45.0% | |
| GAGTATGGGGTCAGAGATAA+GGG | - | tig0007816:11546-11565 | Msa1345930:intron | 45.0% | |
| AGTATGGGGTCAGAGATAAG+GGG | - | tig0007816:11547-11566 | Msa1345930:intron | 45.0% | |
| ! | TACTTCAAGTTATGGGACCC+AGG | - | tig0007816:11688-11707 | Msa1345930:intron | 45.0% |
| GGATATCATAAGTGTCCACC+TGG | + | tig0007816:11709-11728 | None:intergenic | 45.0% | |
| GGACAAGGTGAATCTTTAGG+GGG | - | tig0007816:11739-11758 | Msa1345930:intron | 45.0% | |
| ! | GACAAGGTGAATCTTTAGGG+GGG | - | tig0007816:11740-11759 | Msa1345930:intron | 45.0% |
| ! | ACAAGGTGAATCTTTAGGGG+GGG | - | tig0007816:11741-11760 | Msa1345930:intron | 45.0% |
| ATCTGAGGATTTGACTGGGA+AGG | - | tig0007816:10868-10887 | Msa1345930:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | - | tig0007816:10869-10888 | Msa1345930:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | - | tig0007816:10887-10906 | Msa1345930:intron | 45.0% |
| AAAGATGCAGAGGAAAAGGG+AGG | - | tig0007816:12206-12225 | Msa1345930:intron | 45.0% | |
| AGAGGAAAAGGGAGGACATT+GGG | - | tig0007816:12214-12233 | Msa1345930:intron | 45.0% | |
| CAGAAAGGTAACCAACCTCT+AGG | + | tig0007816:12285-12304 | None:intergenic | 45.0% | |
| !! | TGGTATCAGAGCATCGATCT+TGG | - | tig0007816:12427-12446 | Msa1345930:intron | 45.0% |
| CTTGGAACCGTGGTATGTTA+TGG | - | tig0007816:12445-12464 | Msa1345930:CDS | 45.0% | |
| AAGGCGAAGAAGACGCATAT+TGG | - | tig0007816:12492-12511 | Msa1345930:CDS | 45.0% | |
| TCTGCCAATTTCTCTGTCTC+TGG | + | tig0007816:12560-12579 | None:intergenic | 45.0% | |
| ! | GTGCTCATCAATGGTGGTTT+TGG | - | tig0007816:12603-12622 | Msa1345930:intron | 45.0% |
| !!! | CTCATCAATGGTGGTTTTGG+TGG | - | tig0007816:12606-12625 | Msa1345930:intron | 45.0% |
| ! | CATTCGTCACTGCCTTTTTG+TGG | - | tig0007816:12660-12679 | Msa1345930:intron | 45.0% |
| ! | CCCTTTCAATGGTTCTGCAA+TGG | + | tig0007816:12885-12904 | None:intergenic | 45.0% |
| CGAAGAAGAAGTCAAGGTTC+AGG | - | tig0007816:12970-12989 | Msa1345930:intron | 45.0% | |
| GGATGCAGAAAAGATGAAGG+GGG | - | tig0007816:12991-13010 | Msa1345930:CDS | 45.0% | |
| TGATGATAGGGCGAACACTA+AGG | + | tig0007816:13033-13052 | None:intergenic | 45.0% | |
| CTGGCAAGGCAATGATGATA+GGG | + | tig0007816:13045-13064 | None:intergenic | 45.0% | |
| !! | TTCCGACAACCATTTTGAGG+AGG | - | tig0007816:13105-13124 | Msa1345930:intron | 45.0% |
| !! | TCCGACAACCATTTTGAGGA+GGG | - | tig0007816:13106-13125 | Msa1345930:intron | 45.0% |
| ACCCTCCTCAAAATGGTTGT+CGG | + | tig0007816:13110-13129 | None:intergenic | 45.0% | |
| GGAGCATGAAAACATATGCC+TGG | + | tig0007816:13220-13239 | None:intergenic | 45.0% | |
| TAGAGTGACAGATCAAGGTG+TGG | + | tig0007816:13241-13260 | None:intergenic | 45.0% | |
| ! | TTCAAGTTATGGGATCCTGG+AGG | - | tig0007816:13262-13281 | Msa1345930:intron | 45.0% |
| GGATAACATAAGTGTCCTCC+AGG | + | tig0007816:13280-13299 | None:intergenic | 45.0% | |
| TATCCTTCACCTTGAGGACA+AGG | - | tig0007816:13295-13314 | Msa1345930:intron | 45.0% | |
| GGACAAGGTGAATCTTTAGG+AGG | - | tig0007816:11739-11758 | Msa1345930:intron | 45.0% | |
| AAAGATGCAGAGGAAAAGGG+AGG | - | tig0007816:12206-12225 | Msa1345930:intron | 45.0% | |
| AGAGGAAAAGGGAGGACATT+GGG | - | tig0007816:12214-12233 | Msa1345930:intron | 45.0% | |
| CAGAAAGGTAACCAACCTCT+AGG | + | tig0007816:12285-12304 | None:intergenic | 45.0% | |
| AAACCACCTTGAGCCGTTAT+CGG | - | tig0007816:13770-13789 | Msa1345930:intron | 45.0% | |
| GTTATCGGATCAGCAGTTGA+TGG | - | tig0007816:13785-13804 | Msa1345930:intron | 45.0% | |
| ! | TATCGGATCAGCAGTTGATG+GGG | - | tig0007816:13787-13806 | Msa1345930:intron | 45.0% |
| GCTGAGGATGCTTTATCTCA+AGG | - | tig0007816:13840-13859 | Msa1345930:intron | 45.0% | |
| ATTTCCAGATCCAGTGGATG+TGG | + | tig0007816:13907-13926 | None:intergenic | 45.0% | |
| AGCAACATTTCCAGATCCAG+TGG | + | tig0007816:13913-13932 | None:intergenic | 45.0% | |
| ! | GTGTCTTGGTGCAATGGTGT+TGG | - | tig0007816:8808-8827 | Msa1345930:intron | 50.0% |
| GGGTCAATCTGATGAGCACA+AGG | - | tig0007816:8879-8898 | Msa1345930:intron | 50.0% | |
| GTGAGGCTGCAAGGAAAAGT+AGG | - | tig0007816:9040-9059 | Msa1345930:CDS | 50.0% | |
| ! | AGATGTTTCATGTGGCTCGG+TGG | - | tig0007816:10445-10464 | Msa1345930:intron | 50.0% |
| GGGAGAGAAGGGAAGATTGA+GGG | - | tig0007816:10843-10862 | Msa1345930:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | - | tig0007816:10844-10863 | Msa1345930:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | - | tig0007816:10864-10883 | Msa1345930:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | - | tig0007816:10870-10889 | Msa1345930:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | - | tig0007816:10886-10905 | Msa1345930:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | + | tig0007816:10896-10915 | None:intergenic | 50.0% | |
| GATTCCACCAGTGTGACCAT+TGG | + | tig0007816:11189-11208 | None:intergenic | 50.0% | |
| GACGCCATCAACAGGTTAGT+TGG | - | tig0007816:11209-11228 | Msa1345930:intron | 50.0% | |
| AATCCAAATCCCACCGCGAT+AGG | - | tig0007816:11385-11404 | Msa1345930:intron | 50.0% | |
| TTTCCTATCGCGGTGGGATT+TGG | + | tig0007816:11391-11410 | None:intergenic | 50.0% | |
| ! | TTCAAGTTATGGGACCCAGG+TGG | - | tig0007816:11691-11710 | Msa1345930:intron | 50.0% |
| TATCCTCCACCTTGAGGACA+AGG | - | tig0007816:11724-11743 | Msa1345930:intron | 50.0% | |
| GATTCACCTTGTCCTCAAGG+TGG | + | tig0007816:11733-11752 | None:intergenic | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | - | tig0007816:10843-10862 | Msa1345930:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | - | tig0007816:10844-10863 | Msa1345930:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | - | tig0007816:10864-10883 | Msa1345930:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | - | tig0007816:10870-10889 | Msa1345930:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | - | tig0007816:10886-10905 | Msa1345930:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | + | tig0007816:10896-10915 | None:intergenic | 50.0% | |
| CAGAGGAAAAGGGAGGACAT+TGG | - | tig0007816:12213-12232 | Msa1345930:intron | 50.0% | |
| CTAGGCTCTCTAACTCCTAG+AGG | - | tig0007816:12267-12286 | Msa1345930:intron | 50.0% | |
| GCTCTCTAACTCCTAGAGGT+TGG | - | tig0007816:12271-12290 | Msa1345930:intron | 50.0% | |
| GCGAAGAAGACGCATATTGG+TGG | - | tig0007816:12495-12514 | Msa1345930:CDS | 50.0% | |
| TGCGTGGATGTGCTCATCAA+TGG | - | tig0007816:12594-12613 | Msa1345930:intron | 50.0% | |
| GTGGATGTGCTCATCAATGG+TGG | - | tig0007816:12597-12616 | Msa1345930:intron | 50.0% | |
| ! | AACTTGCATGTGGATGACGG+CGG | + | tig0007816:12634-12653 | None:intergenic | 50.0% |
| GCCAACTTGCATGTGGATGA+CGG | + | tig0007816:12637-12656 | None:intergenic | 50.0% | |
| GGCAAGACGTCTCGATATTC+TGG | + | tig0007816:12695-12714 | None:intergenic | 50.0% | |
| TCGAAGTCGTTGACGGTTCA+AGG | - | tig0007816:12749-12768 | Msa1345930:intron | 50.0% | |
| GAACACTAAGGTTCACAGCG+AGG | + | tig0007816:13021-13040 | None:intergenic | 50.0% | |
| CCTGGCAAGGCAATGATGAT+AGG | + | tig0007816:13046-13065 | None:intergenic | 50.0% | |
| CCTATCATCATTGCCTTGCC+AGG | - | tig0007816:13043-13062 | Msa1345930:intron | 50.0% | |
| CCTGAAATGACCGTGGAGAA+AGG | + | tig0007816:13070-13089 | None:intergenic | 50.0% | |
| CCTTTCTCCACGGTCATTTC+AGG | - | tig0007816:13067-13086 | Msa1345930:intron | 50.0% | |
| GCAGAATCCTGAAATGACCG+TGG | + | tig0007816:13077-13096 | None:intergenic | 50.0% | |
| !! | GACAACCATTTTGAGGAGGG+TGG | - | tig0007816:13109-13128 | Msa1345930:intron | 50.0% |
| ATTGGCCACCCTCCTCAAAA+TGG | + | tig0007816:13117-13136 | None:intergenic | 50.0% | |
| ! | GGGTGGCCAATGTCTTTTGA+TGG | - | tig0007816:13126-13145 | Msa1345930:intron | 50.0% |
| AAAGAGGGTGAGGAAGCAGT+AGG | + | tig0007816:13160-13179 | None:intergenic | 50.0% | |
| TGCTTCCTCACCCTCTTTCT+GGG | - | tig0007816:13162-13181 | Msa1345930:intron | 50.0% | |
| TCACCTTGTCCTCAAGGTGA+AGG | + | tig0007816:13301-13320 | None:intergenic | 50.0% | |
| CAGAGGAAAAGGGAGGACAT+TGG | - | tig0007816:12213-12232 | Msa1345930:intron | 50.0% | |
| CTAGGCTCTCTAACTCCTAG+AGG | - | tig0007816:12267-12286 | Msa1345930:intron | 50.0% | |
| GCTCTCTAACTCCTAGAGGT+TGG | - | tig0007816:12271-12290 | Msa1345930:intron | 50.0% | |
| GCATTCTTCTCAGCAAGCTG+AGG | - | tig0007816:13824-13843 | Msa1345930:intron | 50.0% | |
| ACACTATCCTCCACATCCAC+TGG | - | tig0007816:13894-13913 | Msa1345930:intron | 50.0% | |
| TGCTGAGTACATGGGCCAAA+TGG | - | tig0007816:13929-13948 | Msa1345930:intron | 50.0% | |
| TGGCCATTGCAAGAGCCATT+TGG | + | tig0007816:13947-13966 | None:intergenic | 50.0% | |
| AGTCTCTAGTGTGGCAAGCT+TGG | + | tig0007816:13967-13986 | None:intergenic | 50.0% | |
| ! | TCCACCGTGTCTTGGTGCAA+TGG | - | tig0007816:8802-8821 | Msa1345930:intron | 55.0% |
| ACCATTGCACCAAGACACGG+TGG | + | tig0007816:8806-8825 | None:intergenic | 55.0% | |
| TCGGCTGATGCAGAATCGTG+AGG | - | tig0007816:9023-9042 | Msa1345930:CDS | 55.0% | |
| TGCAGAATCGTGAGGCTGCA+AGG | - | tig0007816:9031-9050 | Msa1345930:CDS | 55.0% | |
| TGTTGCAACCGGAGTTCCAG+CGG | - | tig0007816:9878-9897 | Msa1345930:intron | 55.0% | |
| ACCATGATCCGCTGGAACTC+CGG | + | tig0007816:9889-9908 | None:intergenic | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | - | tig0007816:10842-10861 | Msa1345930:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | - | tig0007816:10853-10872 | Msa1345930:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | - | tig0007816:10863-10882 | Msa1345930:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | - | tig0007816:10879-10898 | Msa1345930:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | - | tig0007816:10890-10909 | Msa1345930:intron | 55.0% |
| TCGGAACCGTGGTACCGTTA+TGG | - | tig0007816:11021-11040 | Msa1345930:intron | 55.0% | |
| CTGGTGGCTGCTATGCATTG+AGG | - | tig0007816:11087-11106 | Msa1345930:intron | 55.0% | |
| GTGGAATCGACGCCATCAAC+AGG | - | tig0007816:11201-11220 | Msa1345930:intron | 55.0% | |
| TTGGACCGGTTGACGACTCA+AGG | - | tig0007816:11325-11344 | Msa1345930:intron | 55.0% | |
| CGGTGGGATTTGGATTTCCC+TGG | + | tig0007816:11381-11400 | None:intergenic | 55.0% | |
| TCACCTTGTCCTCAAGGTGG+AGG | + | tig0007816:11730-11749 | None:intergenic | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | - | tig0007816:10842-10861 | Msa1345930:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | - | tig0007816:10853-10872 | Msa1345930:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | - | tig0007816:10863-10882 | Msa1345930:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | - | tig0007816:10879-10898 | Msa1345930:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | - | tig0007816:10890-10909 | Msa1345930:intron | 55.0% |
| !! | GGGTTGGTTTGGGAGAGACT+AGG | - | tig0007816:12249-12268 | Msa1345930:intron | 55.0% |
| !! | GAGCATCGATCTTGGAACCG+TGG | - | tig0007816:12435-12454 | Msa1345930:CDS | 55.0% |
| GAAGTTGTGACTGCGTTGCG+TGG | - | tig0007816:12578-12597 | Msa1345930:intron | 55.0% | |
| GCCGTCATCCACATGCAAGT+TGG | - | tig0007816:12633-12652 | Msa1345930:intron | 55.0% | |
| CTTGCCAGGTCCTTTCTCCA+CGG | - | tig0007816:13057-13076 | Msa1345930:intron | 55.0% | |
| ATGACCGTGGAGAAAGGACC+TGG | + | tig0007816:13064-13083 | None:intergenic | 55.0% | |
| CTGCTTCCTCACCCTCTTTC+TGG | - | tig0007816:13161-13180 | Msa1345930:intron | 55.0% | |
| TTTGGCCCAGAAAGAGGGTG+AGG | + | tig0007816:13170-13189 | None:intergenic | 55.0% | |
| !! | GGGTTGGTTTGGGAGAGACT+AGG | - | tig0007816:12249-12268 | Msa1345930:intron | 55.0% |
| ! | GATCCGATAACGGCTCAAGG+TGG | + | tig0007816:13776-13795 | None:intergenic | 55.0% |
| ! | GCTGATCCGATAACGGCTCA+AGG | + | tig0007816:13779-13798 | None:intergenic | 55.0% |
| TCCTCCACATCCACTGGATC+TGG | - | tig0007816:13900-13919 | Msa1345930:intron | 55.0% | |
| TCCAGATCCAGTGGATGTGG+AGG | + | tig0007816:13904-13923 | None:intergenic | 55.0% | |
| GGGCCAAATGGCTCTTGCAA+TGG | - | tig0007816:13941-13960 | Msa1345930:intron | 55.0% | |
| ACCGGAGTTCCAGCGGATCA+TGG | - | tig0007816:9885-9904 | Msa1345930:intron | 60.0% | |
| GAGCAACGATCTCGGAACCG+TGG | - | tig0007816:11010-11029 | Msa1345930:intron | 60.0% | |
| TCAGAGGTCGTGCTCGCCAA+TGG | - | tig0007816:11170-11189 | Msa1345930:intron | 60.0% | |
| GTGCTCGCCAATGGTCACAC+TGG | - | tig0007816:11179-11198 | Msa1345930:intron | 60.0% | |
| CTCGCCAATGGTCACACTGG+TGG | - | tig0007816:11182-11201 | Msa1345930:intron | 60.0% | |
| CGTGGAGAAAGGACCTGGCA+AGG | + | tig0007816:13059-13078 | None:intergenic | 60.0% | |
| ! | CAAGGAGAGCGCGAGCAGCT+TGG | + | tig0007816:14164-14183 | None:intergenic | 65.0% |
| !! | AGCGCGAGCAGCTTGGTGCG+CGG | + | tig0007816:14157-14176 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0007816 | gene | 8458 | 14464 | 8458 | ID=Msa1345930;Name=Msa1345930 |
| tig0007816 | mRNA | 8458 | 14464 | 8458 | ID=Msa1345930-mRNA-1;Parent=Msa1345930;Name=Msa1345930-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.75|0.44|1|0.75|0.77|9|210|334 |
| tig0007816 | exon | 8458 | 8817 | 8458 | ID=Msa1345930-mRNA-1:exon:5253;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 8924 | 9160 | 8924 | ID=Msa1345930-mRNA-1:exon:5252;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 12430 | 12578 | 12430 | ID=Msa1345930-mRNA-1:exon:5251;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 12986 | 13052 | 12986 | ID=Msa1345930-mRNA-1:exon:5250;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 13168 | 13233 | 13168 | ID=Msa1345930-mRNA-1:exon:5249;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 13848 | 13907 | 13848 | ID=Msa1345930-mRNA-1:exon:5248;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 14022 | 14126 | 14022 | ID=Msa1345930-mRNA-1:exon:5247;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 14220 | 14318 | 14220 | ID=Msa1345930-mRNA-1:exon:5246;Parent=Msa1345930-mRNA-1 |
| tig0007816 | exon | 14393 | 14464 | 14393 | ID=Msa1345930-mRNA-1:exon:5245;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 14393 | 14464 | 14393 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 14220 | 14318 | 14220 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 14022 | 14126 | 14022 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 13848 | 13907 | 13848 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 13168 | 13233 | 13168 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 12986 | 13052 | 12986 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 12430 | 12578 | 12430 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 8924 | 9160 | 8924 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | CDS | 8668 | 8817 | 8668 | ID=Msa1345930-mRNA-1:cds;Parent=Msa1345930-mRNA-1 |
| tig0007816 | three_prime_UTR | 8458 | 8667 | 8458 | ID=Msa1345930-mRNA-1:three_prime_utr;Parent=Msa1345930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
