Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347080 | XP_013465857.1 | 96.581 | 351 | 12 | 0 | 1 | 351 | 1 | 351 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347080 | A0A072VER0 | 96.581 | 351 | 12 | 0 | 1 | 351 | 1 | 351 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053950 | Msa1347080 | 0.979704 | 1.479577e-148 | -8.615850e-47 |
| Msa0096500 | Msa1347080 | 0.956252 | 4.568720e-114 | -8.615850e-47 |
| Msa0148420 | Msa1347080 | 0.827954 | 1.175946e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347080 | MtrunA17_Chr1g0150621 | 96.581 | 351 | 12 | 0 | 1 | 351 | 1 | 351 | 0.0 | 702 |
| Msa1347080 | MtrunA17_Chr3g0136591 | 57.895 | 57 | 23 | 1 | 289 | 344 | 1 | 57 | 4.61e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347080 | AT5G21280.2 | 57.000 | 100 | 33 | 2 | 4 | 103 | 6 | 95 | 4.48e-23 | 97.8 |
| Msa1347080 | AT5G21280.1 | 57.000 | 100 | 33 | 2 | 4 | 103 | 6 | 95 | 7.30e-23 | 97.4 |
Find 49 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAATTTCTTGAAGAAAA+TGG | 0.148225 | tig0009510:+1773 | Msa1347080:CDS |
| TGTTGTTGTTATTAAGTAAA+AGG | 0.179289 | tig0009510:-1470 | Msa1347080:intergenic |
| TTGACATTGAGAAGGATTTA+AGG | 0.233891 | tig0009510:+1214 | Msa1347080:CDS |
| AGGATTTAAGGTTCAATTCT+AGG | 0.243711 | tig0009510:+1226 | Msa1347080:CDS |
| TTCAATCCTAAAGTTTGATT+TGG | 0.246187 | tig0009510:-1411 | Msa1347080:intergenic |
| ATGGAATGATACTATGAATT+TGG | 0.276126 | tig0009510:+1734 | Msa1347080:CDS |
| GTATTGTTCATGGTTTCTTT+TGG | 0.306243 | tig0009510:-889 | Msa1347080:intergenic |
| TTGCATGATGGATAAATCTT+AGG | 0.307927 | tig0009510:-1255 | Msa1347080:intergenic |
| ACCCTCCCAAATCAAACTTT+AGG | 0.328417 | tig0009510:+1405 | Msa1347080:CDS |
| ACAATCTTTGGTATTGTTCA+TGG | 0.335277 | tig0009510:-899 | Msa1347080:intergenic |
| GGAGAAAATGATGAAGAAAT+AGG | 0.340088 | tig0009510:-1354 | Msa1347080:intergenic |
| TCAAGAAAGACTTCTAAATA+TGG | 0.345355 | tig0009510:+1035 | Msa1347080:CDS |
| ATGGAAGAAATGAGATCATT+AGG | 0.369233 | tig0009510:+1693 | Msa1347080:CDS |
| TCAATCCTAAAGTTTGATTT+GGG | 0.370962 | tig0009510:-1410 | Msa1347080:intergenic |
| TTTCTTAAACTTTGTTGTCT+TGG | 0.371667 | tig0009510:-943 | Msa1347080:intergenic |
| TTTAGAAGTCTTTCTTGATA+AGG | 0.374410 | tig0009510:-1030 | Msa1347080:intergenic |
| AGTTGTAACCCTTGATTCAA+TGG | 0.375357 | tig0009510:-1625 | Msa1347080:intergenic |
| GAAGGAACTTCATGATCATT+TGG | 0.380061 | tig0009510:-1555 | Msa1347080:intergenic |
| TGTGATACTTTATTAATTGA+AGG | 0.389073 | tig0009510:-1573 | Msa1347080:intergenic |
| TAGTGCGTACATTCGAAGTT+TGG | 0.407364 | tig0009510:+843 | Msa1347080:CDS |
| AGCCGTGGATGATAAACTTA+TGG | 0.408848 | tig0009510:+1674 | Msa1347080:CDS |
| TTCAATGGTATCAACCTCTA+AGG | 0.421714 | tig0009510:-1610 | Msa1347080:intergenic |
| GTTGTTGTTATTAAGTAAAA+GGG | 0.426331 | tig0009510:-1469 | Msa1347080:intergenic |
| TGTTGAAATCATGTAAACTA+AGG | 0.431291 | tig0009510:-1434 | Msa1347080:intergenic |
| AACTTAAAACATGTGAAAGT+TGG | 0.442891 | tig0009510:-1191 | Msa1347080:intergenic |
| CACTTCCACACTTTCACACA+TGG | 0.459856 | tig0009510:+1331 | Msa1347080:CDS |
| ATTAGGAGAACAATATCAAA+TGG | 0.463158 | tig0009510:+1710 | Msa1347080:CDS |
| CATGTCATGTCTTTGAATCA+TGG | 0.468771 | tig0009510:+1829 | Msa1347080:CDS |
| TGAAGAAGGTGTGACCTTAG+AGG | 0.469277 | tig0009510:+1596 | Msa1347080:CDS |
| AGGTTGATACCATTGAATCA+AGG | 0.469976 | tig0009510:+1616 | Msa1347080:CDS |
| TTCCATAAGTTTATCATCCA+CGG | 0.471668 | tig0009510:-1676 | Msa1347080:intergenic |
| ATTTGGTTACATCAACTTTG+TGG | 0.479810 | tig0009510:+1751 | Msa1347080:CDS |
| TGAATCAAGGGTTACAACTA+AGG | 0.480638 | tig0009510:+1629 | Msa1347080:CDS |
| AGCTGCTCTATGAAACTTCA+AGG | 0.495899 | tig0009510:-1085 | Msa1347080:intergenic |
| TCCTAAAGTTTGATTTGGGA+GGG | 0.506107 | tig0009510:-1406 | Msa1347080:intergenic |
| GAAAATTTGTCATTGCATGA+TGG | 0.520699 | tig0009510:-1267 | Msa1347080:intergenic |
| GGTTGATACCATTGAATCAA+GGG | 0.522133 | tig0009510:+1617 | Msa1347080:CDS |
| GAGAACAATATCAAATGGAA+TGG | 0.524719 | tig0009510:+1715 | Msa1347080:CDS |
| ATCCTAAAGTTTGATTTGGG+AGG | 0.543720 | tig0009510:-1407 | Msa1347080:intergenic |
| TGTACGCACTAGAGAGATCA+TGG | 0.546995 | tig0009510:-831 | Msa1347080:intergenic |
| AATAAAGTATCACATGAAGA+AGG | 0.553615 | tig0009510:+1582 | Msa1347080:CDS |
| AAGACTTCTAAATATGGCTG+AGG | 0.562565 | tig0009510:+1041 | Msa1347080:CDS |
| GTTACAACTAAGGTCGATGA+AGG | 0.563088 | tig0009510:+1639 | Msa1347080:CDS |
| AGCTATGAAACAAGCTAGTG+AGG | 0.606916 | tig0009510:+1104 | Msa1347080:CDS |
| TGATGCATATACAACACAAG+AGG | 0.624458 | tig0009510:+1800 | Msa1347080:CDS |
| ATAGGCCATGTGTGAAAGTG+TGG | 0.642059 | tig0009510:-1336 | Msa1347080:intergenic |
| AGGAGAATGTCATTCAGCCG+TGG | 0.671234 | tig0009510:+1659 | Msa1347080:CDS |
| TCATTTGGTAGAGAAAGTGA+AGG | 0.702280 | tig0009510:-1540 | Msa1347070:intergenic |
| AAGTGTGGAAGTGAAAGTGA+AGG | 0.709037 | tig0009510:-1321 | Msa1347070:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAATTTTCAGCCAAAA+GGG | - | tig0009510:1382-1401 | Msa1347080:intergenic | 20.0% |
| !!! | AATTTAAATTTTCAGCCAAA+AGG | - | tig0009510:1383-1402 | Msa1347080:intergenic | 20.0% |
| !!! | GTTGTTGTTATTAAGTAAAA+GGG | - | tig0009510:1472-1491 | Msa1347080:intergenic | 20.0% |
| !!! | TGTTGTTGTTATTAAGTAAA+AGG | - | tig0009510:1473-1492 | Msa1347080:intergenic | 20.0% |
| !! | TGTGATACTTTATTAATTGA+AGG | - | tig0009510:1576-1595 | Msa1347080:intergenic | 20.0% |
| !! | GTTAAATTTCTTGAAGAAAA+TGG | + | tig0009510:1773-1792 | Msa1347080:CDS | 20.0% |
| !!! | ATTTAAATTTTCAGCCAAAA+GGG | - | tig0009510:1382-1401 | Msa1347080:intergenic | 20.0% |
| !!! | AATTTAAATTTTCAGCCAAA+AGG | - | tig0009510:1383-1402 | Msa1347080:intergenic | 20.0% |
| !!! | GTTGTTGTTATTAAGTAAAA+GGG | - | tig0009510:1472-1491 | Msa1347080:intergenic | 20.0% |
| !!! | TGTTGTTGTTATTAAGTAAA+AGG | - | tig0009510:1473-1492 | Msa1347080:intergenic | 20.0% |
| !! | TGTGATACTTTATTAATTGA+AGG | - | tig0009510:1576-1595 | Msa1347080:intergenic | 20.0% |
| !! | GTTAAATTTCTTGAAGAAAA+TGG | + | tig0009510:1773-1792 | Msa1347080:CDS | 20.0% |
| !! | TTTCTTAAACTTTGTTGTCT+TGG | - | tig0009510:946-965 | Msa1347080:intergenic | 25.0% |
| ! | ACAAAAAACAAGTTAGAAGA+AGG | + | tig0009510:992-1011 | Msa1347080:CDS | 25.0% |
| ! | TTTAGAAGTCTTTCTTGATA+AGG | - | tig0009510:1033-1052 | Msa1347080:intergenic | 25.0% |
| ! | TCAAGAAAGACTTCTAAATA+TGG | + | tig0009510:1035-1054 | Msa1347080:CDS | 25.0% |
| ! | AACTTAAAACATGTGAAAGT+TGG | - | tig0009510:1194-1213 | Msa1347080:intergenic | 25.0% |
| !!! | TTTAAGTTTTGACATTGAGA+AGG | + | tig0009510:1206-1225 | Msa1347080:CDS | 25.0% |
| !! | TCAATCCTAAAGTTTGATTT+GGG | - | tig0009510:1413-1432 | Msa1347080:intergenic | 25.0% |
| ! | TTCAATCCTAAAGTTTGATT+TGG | - | tig0009510:1414-1433 | Msa1347080:intergenic | 25.0% |
| ! | TGTTGAAATCATGTAAACTA+AGG | - | tig0009510:1437-1456 | Msa1347080:intergenic | 25.0% |
| !! | AATAAAGTATCACATGAAGA+AGG | + | tig0009510:1582-1601 | Msa1347080:CDS | 25.0% |
| ! | ATTAGGAGAACAATATCAAA+TGG | + | tig0009510:1710-1729 | Msa1347080:CDS | 25.0% |
| ! | ATGGAATGATACTATGAATT+TGG | + | tig0009510:1734-1753 | Msa1347080:CDS | 25.0% |
| !! | TTTCTTAAACTTTGTTGTCT+TGG | - | tig0009510:946-965 | Msa1347080:intergenic | 25.0% |
| ! | ACAAAAAACAAGTTAGAAGA+AGG | + | tig0009510:992-1011 | Msa1347080:CDS | 25.0% |
| ! | TTTAGAAGTCTTTCTTGATA+AGG | - | tig0009510:1033-1052 | Msa1347080:intergenic | 25.0% |
| ! | TCAAGAAAGACTTCTAAATA+TGG | + | tig0009510:1035-1054 | Msa1347080:CDS | 25.0% |
| ! | AACTTAAAACATGTGAAAGT+TGG | - | tig0009510:1194-1213 | Msa1347080:intergenic | 25.0% |
| !!! | TTTAAGTTTTGACATTGAGA+AGG | + | tig0009510:1206-1225 | Msa1347080:CDS | 25.0% |
| !! | TCAATCCTAAAGTTTGATTT+GGG | - | tig0009510:1413-1432 | Msa1347080:intergenic | 25.0% |
| ! | TTCAATCCTAAAGTTTGATT+TGG | - | tig0009510:1414-1433 | Msa1347080:intergenic | 25.0% |
| ! | TGTTGAAATCATGTAAACTA+AGG | - | tig0009510:1437-1456 | Msa1347080:intergenic | 25.0% |
| !! | AATAAAGTATCACATGAAGA+AGG | + | tig0009510:1582-1601 | Msa1347080:CDS | 25.0% |
| ! | ATTAGGAGAACAATATCAAA+TGG | + | tig0009510:1710-1729 | Msa1347080:CDS | 25.0% |
| ! | ATGGAATGATACTATGAATT+TGG | + | tig0009510:1734-1753 | Msa1347080:CDS | 25.0% |
| ! | GTATTGTTCATGGTTTCTTT+TGG | - | tig0009510:892-911 | Msa1347080:intergenic | 30.0% |
| ACAATCTTTGGTATTGTTCA+TGG | - | tig0009510:902-921 | Msa1347080:intergenic | 30.0% | |
| !! | ACCAAAGATTGTGTTTTTGA+TGG | + | tig0009510:910-929 | Msa1347080:CDS | 30.0% |
| ACCATCAAAAACACAATCTT+TGG | - | tig0009510:914-933 | Msa1347080:intergenic | 30.0% | |
| TTGACATTGAGAAGGATTTA+AGG | + | tig0009510:1214-1233 | Msa1347080:CDS | 30.0% | |
| ! | AGGATTTAAGGTTCAATTCT+AGG | + | tig0009510:1226-1245 | Msa1347080:CDS | 30.0% |
| !! | TTGCATGATGGATAAATCTT+AGG | - | tig0009510:1258-1277 | Msa1347080:intergenic | 30.0% |
| GAAAATTTGTCATTGCATGA+TGG | - | tig0009510:1270-1289 | Msa1347080:intergenic | 30.0% | |
| AGGATGAGAAAAAGAAGAAT+AGG | - | tig0009510:1304-1323 | Msa1347080:intergenic | 30.0% | |
| GGAGAAAATGATGAAGAAAT+AGG | - | tig0009510:1357-1376 | Msa1347080:intergenic | 30.0% | |
| TTCCATAAGTTTATCATCCA+CGG | - | tig0009510:1679-1698 | Msa1347080:intergenic | 30.0% | |
| ATGGAAGAAATGAGATCATT+AGG | + | tig0009510:1693-1712 | Msa1347080:CDS | 30.0% | |
| GAGAACAATATCAAATGGAA+TGG | + | tig0009510:1715-1734 | Msa1347080:CDS | 30.0% | |
| ATTTGGTTACATCAACTTTG+TGG | + | tig0009510:1751-1770 | Msa1347080:CDS | 30.0% | |
| ! | GAATCATGGAATTTTCAACT+TGG | + | tig0009510:1843-1862 | Msa1347080:CDS | 30.0% |
| ! | GTATTGTTCATGGTTTCTTT+TGG | - | tig0009510:892-911 | Msa1347080:intergenic | 30.0% |
| ACAATCTTTGGTATTGTTCA+TGG | - | tig0009510:902-921 | Msa1347080:intergenic | 30.0% | |
| !! | ACCAAAGATTGTGTTTTTGA+TGG | + | tig0009510:910-929 | Msa1347080:CDS | 30.0% |
| ACCATCAAAAACACAATCTT+TGG | - | tig0009510:914-933 | Msa1347080:intergenic | 30.0% | |
| TTGACATTGAGAAGGATTTA+AGG | + | tig0009510:1214-1233 | Msa1347080:CDS | 30.0% | |
| ! | AGGATTTAAGGTTCAATTCT+AGG | + | tig0009510:1226-1245 | Msa1347080:CDS | 30.0% |
| !! | TTGCATGATGGATAAATCTT+AGG | - | tig0009510:1258-1277 | Msa1347080:intergenic | 30.0% |
| GAAAATTTGTCATTGCATGA+TGG | - | tig0009510:1270-1289 | Msa1347080:intergenic | 30.0% | |
| AGGATGAGAAAAAGAAGAAT+AGG | - | tig0009510:1304-1323 | Msa1347080:intergenic | 30.0% | |
| GGAGAAAATGATGAAGAAAT+AGG | - | tig0009510:1357-1376 | Msa1347080:intergenic | 30.0% | |
| TTCCATAAGTTTATCATCCA+CGG | - | tig0009510:1679-1698 | Msa1347080:intergenic | 30.0% | |
| ATGGAAGAAATGAGATCATT+AGG | + | tig0009510:1693-1712 | Msa1347080:CDS | 30.0% | |
| GAGAACAATATCAAATGGAA+TGG | + | tig0009510:1715-1734 | Msa1347080:CDS | 30.0% | |
| ATTTGGTTACATCAACTTTG+TGG | + | tig0009510:1751-1770 | Msa1347080:CDS | 30.0% | |
| ! | GAATCATGGAATTTTCAACT+TGG | + | tig0009510:1843-1862 | Msa1347080:CDS | 30.0% |
| !!! | CATGGTTTCTTTTGGTTTTG+TGG | - | tig0009510:884-903 | Msa1347080:intergenic | 35.0% |
| AAGACTTCTAAATATGGCTG+AGG | + | tig0009510:1041-1060 | Msa1347080:CDS | 35.0% | |
| ! | ATCATTTTCTCCAACCCTTT+TGG | + | tig0009510:1365-1384 | Msa1347080:CDS | 35.0% |
| ! | AAATTTTCAGCCAAAAGGGT+TGG | - | tig0009510:1378-1397 | Msa1347080:intergenic | 35.0% |
| !! | TCCTAAAGTTTGATTTGGGA+GGG | - | tig0009510:1409-1428 | Msa1347080:intergenic | 35.0% |
| !! | ATCCTAAAGTTTGATTTGGG+AGG | - | tig0009510:1410-1429 | Msa1347080:intergenic | 35.0% |
| TCATTTGGTAGAGAAAGTGA+AGG | - | tig0009510:1543-1562 | Msa1347080:intergenic | 35.0% | |
| GAAGGAACTTCATGATCATT+TGG | - | tig0009510:1558-1577 | Msa1347080:intergenic | 35.0% | |
| TTCAATGGTATCAACCTCTA+AGG | - | tig0009510:1613-1632 | Msa1347080:intergenic | 35.0% | |
| !! | AGGTTGATACCATTGAATCA+AGG | + | tig0009510:1616-1635 | Msa1347080:CDS | 35.0% |
| ! | GGTTGATACCATTGAATCAA+GGG | + | tig0009510:1617-1636 | Msa1347080:CDS | 35.0% |
| AGTTGTAACCCTTGATTCAA+TGG | - | tig0009510:1628-1647 | Msa1347080:intergenic | 35.0% | |
| TGAATCAAGGGTTACAACTA+AGG | + | tig0009510:1629-1648 | Msa1347080:CDS | 35.0% | |
| TGATGCATATACAACACAAG+AGG | + | tig0009510:1800-1819 | Msa1347080:CDS | 35.0% | |
| CATGTCATGTCTTTGAATCA+TGG | + | tig0009510:1829-1848 | Msa1347080:CDS | 35.0% | |
| !!! | CATGGTTTCTTTTGGTTTTG+TGG | - | tig0009510:884-903 | Msa1347080:intergenic | 35.0% |
| AAGACTTCTAAATATGGCTG+AGG | + | tig0009510:1041-1060 | Msa1347080:CDS | 35.0% | |
| ! | ATCATTTTCTCCAACCCTTT+TGG | + | tig0009510:1365-1384 | Msa1347080:CDS | 35.0% |
| ! | AAATTTTCAGCCAAAAGGGT+TGG | - | tig0009510:1378-1397 | Msa1347080:intergenic | 35.0% |
| !! | TCCTAAAGTTTGATTTGGGA+GGG | - | tig0009510:1409-1428 | Msa1347080:intergenic | 35.0% |
| !! | ATCCTAAAGTTTGATTTGGG+AGG | - | tig0009510:1410-1429 | Msa1347080:intergenic | 35.0% |
| TCATTTGGTAGAGAAAGTGA+AGG | - | tig0009510:1543-1562 | Msa1347080:intergenic | 35.0% | |
| GAAGGAACTTCATGATCATT+TGG | - | tig0009510:1558-1577 | Msa1347080:intergenic | 35.0% | |
| TTCAATGGTATCAACCTCTA+AGG | - | tig0009510:1613-1632 | Msa1347080:intergenic | 35.0% | |
| !! | AGGTTGATACCATTGAATCA+AGG | + | tig0009510:1616-1635 | Msa1347080:CDS | 35.0% |
| ! | GGTTGATACCATTGAATCAA+GGG | + | tig0009510:1617-1636 | Msa1347080:CDS | 35.0% |
| AGTTGTAACCCTTGATTCAA+TGG | - | tig0009510:1628-1647 | Msa1347080:intergenic | 35.0% | |
| TGAATCAAGGGTTACAACTA+AGG | + | tig0009510:1629-1648 | Msa1347080:CDS | 35.0% | |
| TGATGCATATACAACACAAG+AGG | + | tig0009510:1800-1819 | Msa1347080:CDS | 35.0% | |
| CATGTCATGTCTTTGAATCA+TGG | + | tig0009510:1829-1848 | Msa1347080:CDS | 35.0% | |
| TAGTGCGTACATTCGAAGTT+TGG | + | tig0009510:843-862 | Msa1347080:CDS | 40.0% | |
| AGCTGCTCTATGAAACTTCA+AGG | - | tig0009510:1088-1107 | Msa1347080:intergenic | 40.0% | |
| AGCTATGAAACAAGCTAGTG+AGG | + | tig0009510:1104-1123 | Msa1347080:CDS | 40.0% | |
| AAGTGTGGAAGTGAAAGTGA+AGG | - | tig0009510:1324-1343 | Msa1347080:intergenic | 40.0% | |
| ACCCTCCCAAATCAAACTTT+AGG | + | tig0009510:1405-1424 | Msa1347080:CDS | 40.0% | |
| GTTACAACTAAGGTCGATGA+AGG | + | tig0009510:1639-1658 | Msa1347080:CDS | 40.0% | |
| AGCCGTGGATGATAAACTTA+TGG | + | tig0009510:1674-1693 | Msa1347080:CDS | 40.0% | |
| TAGTGCGTACATTCGAAGTT+TGG | + | tig0009510:843-862 | Msa1347080:CDS | 40.0% | |
| AGCTGCTCTATGAAACTTCA+AGG | - | tig0009510:1088-1107 | Msa1347080:intergenic | 40.0% | |
| AGCTATGAAACAAGCTAGTG+AGG | + | tig0009510:1104-1123 | Msa1347080:CDS | 40.0% | |
| AAGTGTGGAAGTGAAAGTGA+AGG | - | tig0009510:1324-1343 | Msa1347080:intergenic | 40.0% | |
| ACCCTCCCAAATCAAACTTT+AGG | + | tig0009510:1405-1424 | Msa1347080:CDS | 40.0% | |
| GTTACAACTAAGGTCGATGA+AGG | + | tig0009510:1639-1658 | Msa1347080:CDS | 40.0% | |
| AGCCGTGGATGATAAACTTA+TGG | + | tig0009510:1674-1693 | Msa1347080:CDS | 40.0% | |
| TGTACGCACTAGAGAGATCA+TGG | - | tig0009510:834-853 | Msa1379230:intergenic | 45.0% | |
| CACTTCCACACTTTCACACA+TGG | + | tig0009510:1331-1350 | Msa1347080:CDS | 45.0% | |
| ATAGGCCATGTGTGAAAGTG+TGG | - | tig0009510:1339-1358 | Msa1347080:intergenic | 45.0% | |
| ! | TGAAGAAGGTGTGACCTTAG+AGG | + | tig0009510:1596-1615 | Msa1347080:CDS | 45.0% |
| TGTACGCACTAGAGAGATCA+TGG | - | tig0009510:834-853 | Msa1347080:intergenic | 45.0% | |
| CACTTCCACACTTTCACACA+TGG | + | tig0009510:1331-1350 | Msa1347080:CDS | 45.0% | |
| ATAGGCCATGTGTGAAAGTG+TGG | - | tig0009510:1339-1358 | Msa1347080:intergenic | 45.0% | |
| ! | TGAAGAAGGTGTGACCTTAG+AGG | + | tig0009510:1596-1615 | Msa1347080:CDS | 45.0% |
| AGGAGAATGTCATTCAGCCG+TGG | + | tig0009510:1659-1678 | Msa1347080:CDS | 50.0% | |
| AGGAGAATGTCATTCAGCCG+TGG | + | tig0009510:1659-1678 | Msa1347080:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009510 | gene | 814 | 1869 | 814 | ID=Msa1347080;Name=Msa1347080 |
| tig0009510 | mRNA | 814 | 1869 | 814 | ID=Msa1347080-mRNA-1;Parent=Msa1347080;Name=Msa1347080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|351 |
| tig0009510 | exon | 814 | 1869 | 814 | ID=Msa1347080-mRNA-1:exon:5785;Parent=Msa1347080-mRNA-1 |
| tig0009510 | CDS | 814 | 1869 | 814 | ID=Msa1347080-mRNA-1:cds;Parent=Msa1347080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
