AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1349500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349500 MtrunA17_Chr5g0397201 93.519 432 27 1 650 1080 73 504 0.0 790
Msa1349500 MtrunA17_Chr5g0397201 82.973 370 42 1 21 369 20 389 0.0 588
Msa1349500 MtrunA17_Chr5g0397181 84.788 401 60 1 678 1077 1 401 0.0 687
Msa1349500 MtrunA17_Chr5g0397181 89.965 289 8 1 102 369 1 289 4.54e-169 502
Msa1349500 MtrunA17_Chr5g0397191 82.997 347 4 2 367 658 26 372 0.0 566
Msa1349500 MtrunA17_Chr3g0119821 52.817 426 188 6 659 1074 77 499 1.10e-148 453
Msa1349500 MtrunA17_Chr3g0119821 49.046 367 145 8 38 369 32 391 9.40e-105 337
Msa1349500 MtrunA17_Chr1g0195271 51.551 419 191 5 659 1068 81 496 4.98e-143 439
Msa1349500 MtrunA17_Chr1g0195271 48.619 362 153 7 38 369 36 394 5.20e-100 325
Msa1349500 MtrunA17_Chr3g0145261 49.052 422 202 5 659 1069 66 485 1.06e-136 421
Msa1349500 MtrunA17_Chr3g0145261 43.784 370 174 6 32 369 15 382 5.47e-93 305
Msa1349500 MtrunA17_Chr8g0391391 48.456 421 200 8 659 1066 72 488 6.61e-135 417
Msa1349500 MtrunA17_Chr8g0391391 43.169 366 171 7 37 369 26 387 8.18e-95 311
Msa1349500 MtrunA17_Chr5g0439311 48.131 428 202 7 659 1069 73 497 3.72e-133 413
Msa1349500 MtrunA17_Chr5g0439311 44.533 375 168 7 32 369 22 393 1.58e-95 313
Msa1349500 MtrunA17_Chr3g0080171 49.412 425 203 7 655 1071 63 483 1.11e-130 405
Msa1349500 MtrunA17_Chr3g0080171 43.978 357 168 6 41 369 25 377 8.69e-89 294
Msa1349500 MtrunA17_Chr3g0119371 48.131 428 202 7 659 1069 82 506 2.21e-130 406
Msa1349500 MtrunA17_Chr3g0119371 44.086 372 168 7 35 369 34 402 1.22e-90 300
Msa1349500 MtrunA17_Chr3g0086311 48.418 411 208 4 659 1068 72 479 3.42e-130 404
Msa1349500 MtrunA17_Chr3g0086311 48.148 351 159 3 40 369 29 377 3.21e-104 335
Msa1349500 MtrunA17_Chr4g0018361 45.033 453 234 8 623 1066 41 487 8.80e-126 393
Msa1349500 MtrunA17_Chr4g0018361 41.019 373 178 9 34 369 20 387 6.14e-77 262
Msa1349500 MtrunA17_Chr4g0018301 46.247 413 213 4 659 1066 87 495 3.93e-125 392
Msa1349500 MtrunA17_Chr4g0018301 42.222 360 178 5 36 369 40 395 8.42e-83 278
Msa1349500 MtrunA17_Chr8g0388051 47.897 428 203 7 659 1070 70 493 1.67e-124 394
Msa1349500 MtrunA17_Chr8g0388051 45.355 366 160 7 40 369 27 388 5.22e-91 305
Msa1349500 MtrunA17_Chr4g0038131 46.948 426 206 7 659 1068 71 492 1.95e-121 387
Msa1349500 MtrunA17_Chr4g0038131 45.232 367 160 8 40 369 27 389 4.71e-89 300
Msa1349500 MtrunA17_Chr1g0164201 46.651 418 212 6 659 1068 67 481 1.31e-116 369
Msa1349500 MtrunA17_Chr1g0164201 43.333 360 168 7 41 369 25 379 4.84e-80 270
Msa1349500 MtrunA17_Chr3g0142501 42.989 435 227 6 659 1078 98 526 2.87e-111 356
Msa1349500 MtrunA17_Chr3g0142501 38.000 400 210 7 6 369 23 420 3.47e-75 258
Msa1349500 MtrunA17_Chr3g0136381 47.042 355 165 3 40 373 29 381 1.74e-110 350
Msa1349500 MtrunA17_Chr3g0136381 43.855 358 194 3 609 966 27 377 4.38e-102 328
Msa1349500 MtrunA17_Chr8g0372031 44.496 427 218 5 659 1070 104 526 7.61e-108 347
Msa1349500 MtrunA17_Chr8g0372031 38.082 365 189 6 42 370 64 427 1.08e-63 226
Msa1349500 MtrunA17_Chr5g0444721 46.849 365 175 8 721 1068 202 564 3.36e-96 317
Msa1349500 MtrunA17_Chr5g0444721 45.200 250 119 7 136 369 214 461 6.46e-52 192
Msa1349500 MtrunA17_Chr5g0444721 59.596 99 40 0 38 136 31 129 5.57e-32 132
Msa1349500 MtrunA17_Chr5g0444721 48.113 106 51 1 659 760 76 181 4.30e-23 105
Msa1349500 MtrunA17_Chr3g0126111 37.832 452 232 15 659 1073 149 588 5.06e-82 279
Msa1349500 MtrunA17_Chr3g0126111 33.673 392 197 13 34 369 100 484 1.43e-53 198
Msa1349500 MtrunA17_Chr2g0291461 39.414 444 227 11 660 1071 159 592 2.19e-81 278
Msa1349500 MtrunA17_Chr2g0291461 34.109 387 190 10 41 369 111 490 9.11e-51 190
Msa1349500 MtrunA17_Chr4g0018341 44.727 275 145 3 797 1066 2 274 3.36e-77 255
Msa1349500 MtrunA17_Chr4g0018341 36.000 175 105 3 200 369 2 174 1.05e-32 128
Msa1349500 MtrunA17_Chr3g0120661 37.753 445 234 13 661 1074 162 594 2.26e-76 264
Msa1349500 MtrunA17_Chr3g0120661 34.115 384 191 12 41 369 116 492 4.07e-49 185
Msa1349500 MtrunA17_Chr4g0018351 50.000 186 70 2 37 201 26 209 1.75e-47 169
Msa1349500 MtrunA17_Chr4g0018351 51.408 142 67 1 657 798 70 209 1.35e-38 143
Msa1349500 MtrunA17_Chr7g0269571 44.643 168 81 2 912 1068 43 209 3.27e-46 166
Msa1349500 MtrunA17_Chr1g0164181 48.333 180 86 2 659 831 3 182 2.36e-44 164
Msa1349500 MtrunA17_Chr1g0164181 48.214 168 84 3 900 1066 164 329 1.39e-40 152
Msa1349500 MtrunA17_Chr1g0164181 42.778 180 75 3 83 234 3 182 1.71e-32 129
Msa1349500 MtrunA17_Chr5g0397171 96.341 82 3 0 1 82 1 82 9.15e-42 148
Msa1349500 MtrunA17_Chr1g0181791 30.031 323 190 7 353 652 55 364 6.38e-40 153
Msa1349500 MtrunA17_Chr4g0022271 46.622 148 72 3 912 1058 20 161 5.77e-37 137
Msa1349500 MtrunA17_Chr4g0072811 41.765 170 91 3 910 1077 8 171 1.27e-33 128
Msa1349500 MtrunA17_Chr3g0136371 45.745 94 49 2 966 1058 1 93 8.07e-22 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349500 AT4G23560.1 66.667 462 147 2 610 1069 19 475 0.0 612
Msa1349500 AT4G23560.1 67.622 349 92 1 42 369 24 372 3.60e-151 459
Msa1349500 AT4G09740.1 70.803 411 120 0 659 1069 65 475 0.0 601
Msa1349500 AT4G09740.1 58.894 416 143 3 23 410 5 420 1.31e-149 455
Msa1349500 AT1G63990.1 70.418 311 71 1 368 657 28 338 4.69e-149 450
Msa1349500 AT1G02800.1 53.682 421 181 6 657 1068 83 498 1.58e-147 451
Msa1349500 AT1G02800.1 46.384 401 178 8 1 369 1 396 2.73e-101 328
Msa1349500 AT4G02290.1 50.597 419 195 5 657 1066 92 507 1.19e-141 436
Msa1349500 AT4G02290.1 47.790 362 156 6 38 369 49 407 3.77e-99 323
Msa1349500 AT1G23210.1 50.120 415 193 6 659 1063 70 480 3.43e-139 428
Msa1349500 AT1G23210.1 44.595 370 170 7 31 369 18 383 3.02e-94 309
Msa1349500 AT1G70710.1 49.758 414 196 5 659 1063 70 480 2.74e-138 426
Msa1349500 AT1G70710.1 44.353 363 169 6 37 369 24 383 9.36e-94 308
Msa1349500 AT4G39010.1 49.524 420 198 6 659 1066 71 488 7.74e-137 422
Msa1349500 AT4G39010.1 44.142 367 170 6 36 369 24 388 1.37e-98 321
Msa1349500 AT1G22880.1 50.361 415 195 6 659 1066 66 476 1.25e-131 409
Msa1349500 AT1G22880.1 43.889 360 170 6 38 369 21 376 9.06e-84 281
Msa1349500 AT1G71380.1 51.325 415 191 6 659 1066 66 476 9.30e-131 406
Msa1349500 AT1G71380.1 43.164 373 184 7 23 369 6 376 1.03e-85 286
Msa1349500 AT3G43860.2 46.575 438 225 5 632 1068 54 483 4.07e-129 402
Msa1349500 AT3G43860.2 48.571 350 157 3 41 369 34 381 2.49e-103 333
Msa1349500 AT3G43860.1 46.575 438 225 5 632 1068 54 483 4.07e-129 402
Msa1349500 AT3G43860.1 48.571 350 157 3 41 369 34 381 2.49e-103 333
Msa1349500 AT4G02290.2 48.744 398 192 5 678 1066 1 395 3.62e-128 396
Msa1349500 AT4G02290.2 42.953 298 137 6 102 369 1 295 5.02e-65 226
Msa1349500 AT2G32990.1 46.809 423 209 8 659 1066 81 502 1.49e-127 399
Msa1349500 AT2G32990.1 42.473 372 178 7 33 369 31 401 3.64e-89 296
Msa1349500 AT4G11050.2 45.642 436 216 8 659 1077 68 499 4.76e-123 388
Msa1349500 AT4G11050.2 43.750 368 167 7 38 369 23 386 6.13e-90 299
Msa1349500 AT4G11050.3 45.642 436 216 8 659 1077 68 499 5.42e-122 388
Msa1349500 AT4G11050.3 43.750 368 167 7 38 369 23 386 3.26e-89 300
Msa1349500 AT4G11050.1 45.642 436 216 8 659 1077 68 499 5.88e-122 388
Msa1349500 AT4G11050.1 43.750 368 167 7 38 369 23 386 3.34e-89 300
Msa1349500 AT1G64390.1 45.775 426 211 7 659 1068 67 488 5.69e-120 382
Msa1349500 AT1G64390.1 43.750 368 167 7 38 369 22 385 9.48e-89 298
Msa1349500 AT4G39000.1 44.292 438 226 7 650 1073 58 491 3.15e-119 376
Msa1349500 AT4G39000.1 40.838 382 187 8 23 369 7 384 1.24e-82 278
Msa1349500 AT1G22880.2 48.737 396 192 6 678 1066 1 392 3.26e-119 373
Msa1349500 AT1G22880.2 39.865 296 146 6 102 369 1 292 8.31e-58 205
Msa1349500 AT2G44570.1 46.667 420 211 7 659 1068 75 491 2.32e-117 371
Msa1349500 AT2G44570.1 43.526 363 172 8 37 369 29 388 2.96e-80 271
Msa1349500 AT1G48930.1 48.815 422 200 6 659 1066 72 491 3.58e-117 375
Msa1349500 AT1G48930.1 47.802 364 154 6 40 369 29 390 6.96e-87 293
Msa1349500 AT2G44540.1 46.905 420 211 6 659 1069 75 491 8.48e-117 370
Msa1349500 AT2G44540.1 45.278 360 165 6 39 369 31 387 1.79e-83 280
Msa1349500 AT4G38990.2 44.851 437 216 8 650 1066 56 487 1.84e-116 369
Msa1349500 AT4G38990.2 44.011 359 163 6 31 354 13 368 1.65e-84 283
Msa1349500 AT1G19940.2 46.154 416 209 4 659 1063 89 500 5.24e-116 369
Msa1349500 AT1G19940.2 40.443 361 182 5 41 369 48 407 2.70e-76 261
Msa1349500 AT1G19940.1 46.154 416 209 4 659 1063 89 500 5.24e-116 369
Msa1349500 AT1G19940.1 40.443 361 182 5 41 369 48 407 2.70e-76 261
Msa1349500 AT2G44560.1 47.255 419 209 6 659 1068 75 490 2.13e-115 366
Msa1349500 AT2G44560.1 44.444 360 168 6 39 369 31 387 9.71e-82 275
Msa1349500 AT2G44550.1 45.843 421 213 8 659 1069 75 490 3.48e-113 360
Msa1349500 AT2G44550.1 44.444 360 167 7 39 369 31 386 7.27e-82 276
Msa1349500 AT1G63990.2 74.888 223 56 0 368 590 28 250 9.00e-112 348
Msa1349500 AT1G75680.1 46.377 414 203 6 659 1059 98 505 4.11e-111 356
Msa1349500 AT1G75680.1 41.713 362 174 7 42 369 58 416 8.98e-76 260
Msa1349500 AT4G39010.2 43.989 366 170 6 36 368 24 387 4.55e-99 319
Msa1349500 AT4G39010.2 45.455 319 160 6 659 965 71 387 2.30e-89 293
Msa1349500 AT2G44570.2 43.681 364 172 8 37 370 29 389 2.74e-82 274
Msa1349500 AT2G44570.2 42.470 332 179 6 659 981 75 403 1.06e-75 256
Msa1349500 AT5G49720.1 39.189 444 229 11 660 1071 155 589 1.20e-79 273
Msa1349500 AT5G49720.1 34.197 386 191 10 41 369 108 487 2.71e-49 186
Msa1349500 AT4G24260.1 39.189 444 228 11 660 1071 156 589 4.07e-79 272
Msa1349500 AT4G24260.1 34.625 387 189 11 41 369 108 488 1.22e-47 181
Msa1349500 AT1G19940.3 40.327 367 186 5 41 375 48 413 4.16e-79 266
Msa1349500 AT1G19940.3 44.201 319 167 3 659 966 89 407 1.45e-78 264
Msa1349500 AT1G22880.3 46.078 306 134 5 38 315 21 323 1.12e-74 250
Msa1349500 AT1G22880.3 49.425 261 122 5 659 912 66 323 1.93e-71 241
Msa1349500 AT4G38990.1 41.761 352 156 6 31 354 13 343 1.17e-73 248
Msa1349500 AT4G38990.1 39.216 306 162 5 650 950 56 342 9.28e-58 203
Msa1349500 AT1G65610.1 34.921 441 243 13 661 1068 161 590 1.36e-72 254
Msa1349500 AT1G65610.1 32.552 384 196 14 41 369 116 491 2.61e-45 174
Msa1349500 AT4G24260.3 34.884 387 188 11 41 369 108 488 1.10e-48 181
Msa1349500 AT4G24260.3 36.283 339 178 10 660 966 156 488 1.20e-44 169
Msa1349500 AT4G24260.2 35.952 331 150 10 41 315 108 432 6.94e-43 163
Msa1349500 AT4G24260.2 42.017 238 110 7 660 873 156 389 1.33e-39 154
Msa1349500 AT5G02820.1 29.688 320 181 9 360 652 72 374 8.72e-38 147
Msa1349500 AT3G42153.1 58.696 92 34 1 823 910 16 107 8.37e-30 115
Msa1349500 AT3G42153.1 54.348 92 38 1 226 313 16 107 2.35e-27 108
Msa1349500 AT3G13170.1 27.797 295 172 9 440 710 79 356 8.51e-26 110
Msa1349500 AT3G13170.2 29.412 187 105 4 440 606 79 258 3.00e-20 92.4
Msa1349500 AT3G13170.3 29.412 187 105 4 440 606 79 258 3.00e-20 92.4

Find 238 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCTGTGTGTGGATCTTC+TGG 0.173330 tig0010965:-10074 Msa1349500:CDS
ATACTATGCACCTTCAAATT+TGG 0.179555 tig0010965:-9365 Msa1349500:CDS
TCTTCTGGACATGCAATTTC+TGG 0.183398 tig0010965:-10059 Msa1349500:CDS
GAGTACCTTGTGGCAATATC+TGG 0.211115 tig0010965:+9777 None:intergenic
CTCCCCTCCACTTCACTCTT+TGG 0.212758 tig0010965:+17898 None:intergenic
ATGTCATACATGGTGGGATA+TGG 0.230083 tig0010965:-5526 Msa1349500:CDS
ATGAAAAGGATGAACTATTA+TGG 0.237262 tig0010965:-6325 Msa1349500:intron
CCAGAGTACGAGCAGTAAAA+TGG 0.238707 tig0010965:+6450 None:intergenic
AATTAATTCCTCATCCATTA+TGG 0.269396 tig0010965:+18016 None:intergenic
AACTATTATGGGCTGCTTCT+TGG 0.270350 tig0010965:-6313 Msa1349500:CDS
TCAATCTTGTAAAGTGTTCT+TGG 0.279231 tig0010965:+16544 None:intergenic
TCAGCTGCAGCCTCAGTTCC+AGG 0.287596 tig0010965:+16511 None:intergenic
TCAGCTGCAGCCTCAGTTCC+AGG 0.287596 tig0010965:+6839 None:intergenic
TTGTATTGGTCATTAGAATT+TGG 0.289530 tig0010965:+5352 None:intergenic
CCCACATGAATATTAGGATT+TGG 0.290939 tig0010965:+5391 None:intergenic
CTGCTCGTACTCTGGTTATC+AGG 0.293044 tig0010965:-6442 Msa1349500:intron
TCAATCTTGTAAGTTGTTCT+TGG 0.295072 tig0010965:+6872 None:intergenic
CCTCTGTGATGTAATTGTTT+TGG 0.305598 tig0010965:+5493 None:intergenic
GATTTCAGAGGATGTGAAAT+TGG 0.308600 tig0010965:+15525 None:intergenic
ATCTGTAGAGAGTAACTTCC+TGG 0.323240 tig0010965:+15789 None:intergenic
ATATCTTTGGCAGGTGAATC+TGG 0.324005 tig0010965:-17145 Msa1349500:intron
ATGCAGCAAAAGCCTTTGTT+AGG 0.327978 tig0010965:-10982 Msa1349500:CDS
CACTTCACTCTTTGGTCTTT+AGG 0.330155 tig0010965:+17906 None:intergenic
CTTGGTGTATCCATGTCTTC+TGG 0.334811 tig0010965:+6890 None:intergenic
TGTAGGTCCTTTGTCTTCAA+TGG 0.339652 tig0010965:+9107 None:intergenic
ACATAGGTGGACTACATATT+AGG 0.343969 tig0010965:-5565 Msa1349500:intron
ATCTGTAGAGAGCTACTTCC+TGG 0.344038 tig0010965:+5963 None:intergenic
ATAGCACCCACATGAATATT+AGG 0.348295 tig0010965:+5385 None:intergenic
TCAAGCTTTGAGCAATTTGT+AGG 0.352652 tig0010965:+9090 None:intergenic
GTGTCATTGGCAGGTGGATT+TGG 0.356090 tig0010965:-7278 Msa1349500:intron
CATAAGAGACCTTGTAGATA+TGG 0.358118 tig0010965:+11012 None:intergenic
TCTCCGCCGTGCTATTCGTT+GGG 0.366022 tig0010965:-16995 Msa1349500:CDS
CATTGGCAGGTGGATTTGGT+TGG 0.371328 tig0010965:-7274 Msa1349500:intron
TAATGGTCTATTAGCCATAA+TGG 0.374842 tig0010965:-18030 Msa1349500:CDS
TCTTCGCAGTGCTATTCGTT+GGG 0.375871 tig0010965:-7128 Msa1349500:CDS
TACAGTCAGCTTATTGAGTT+GGG 0.376730 tig0010965:-17067 Msa1349500:CDS
GTGCTATCAGATATTGCTTC+AGG 0.377284 tig0010965:-10850 Msa1349500:CDS
AGCTGGGATAACAAATTTGT+TGG 0.384877 tig0010965:-6209 Msa1349500:CDS
TCCTACACTTCCAAATTTGA+AGG 0.392938 tig0010965:+9355 None:intergenic
GCTGGTGATAATGTGAAGTT+TGG 0.393554 tig0010965:-17105 Msa1349500:CDS
CAGATCTTGCATCATTGTAT+TGG 0.398459 tig0010965:+5338 None:intergenic
ATCTCCGCCGTGCTATTCGT+TGG 0.402115 tig0010965:-16996 Msa1349500:CDS
GGTTCTGTTGCAGCTTTGCT+TGG 0.409254 tig0010965:-5268 Msa1349500:CDS
AGCTGGGACAACAAATTTGT+TGG 0.410959 tig0010965:-16026 Msa1349500:CDS
ACCGAAAGGATGAACTGTTA+TGG 0.414159 tig0010965:-16142 Msa1349500:intron
CAAGTACTTGCTTTCTCCAC+TGG 0.416765 tig0010965:+16097 None:intergenic
CACCATGTATGACATCTTCA+TGG 0.417078 tig0010965:+5534 None:intergenic
TCATTGCACCCCACTTTGGC+AGG 0.417272 tig0010965:+5442 None:intergenic
TTCACCATCAGTCTTAATCT+TGG 0.417439 tig0010965:+6007 None:intergenic
CCATTCTACTGCTCGTACTC+TGG 0.417471 tig0010965:-16269 Msa1349500:CDS
CTTGGAGTATCCATGTCTTC+CGG 0.422002 tig0010965:+16562 None:intergenic
AACTGTTATGGGCTGCTGCT+TGG 0.428578 tig0010965:-16130 Msa1349500:CDS
CATATGATAATTCGGTCAAC+AGG 0.429244 tig0010965:+11050 None:intergenic
ATCTTCGCAGTGCTATTCGT+TGG 0.429802 tig0010965:-7129 Msa1349500:CDS
CTTCTCAAAAGGACGTCAAT+AGG 0.432034 tig0010965:-10764 Msa1349500:CDS
GATGTCCTCGAGAATCTTAC+CGG 0.439791 tig0010965:-9069 Msa1349500:intron
TGGCAGGTGGATTTGGTTGG+AGG 0.444755 tig0010965:-7271 Msa1349500:intron
GGGTTCTATTTGTTGATAAG+TGG 0.445442 tig0010965:-18086 Msa1349500:CDS
TCTAGCCGAGGACTCATTGC+TGG 0.446561 tig0010965:-10583 Msa1349500:CDS
TGTCAAGTGGTTAGGACTAC+GGG 0.449645 tig0010965:-9168 Msa1349500:CDS
AGCATTCTTATCACAGCTAA+AGG 0.450124 tig0010965:-9804 Msa1349500:CDS
AGGCAGCGTCTGAGTTCAGC+TGG 0.451630 tig0010965:-16043 Msa1349500:CDS
AGATAACCAAGGTTGGAATC+AGG 0.451903 tig0010965:-16063 Msa1349500:CDS
GCTTGCAATGTCAAGTGGTT+AGG 0.452612 tig0010965:-9176 Msa1349500:CDS
CAGATCTTGTAGCGTTGCTT+CGG 0.455516 tig0010965:-10636 Msa1349500:CDS
TGAAAAGGATGAACTATTAT+GGG 0.456313 tig0010965:-6324 Msa1349500:intron
ACCATTATTCTTACTACTCA+TGG 0.457606 tig0010965:+18046 None:intergenic
TTCACCATCACTATGAATCT+TGG 0.458528 tig0010965:+15833 None:intergenic
TGGAACTGAGGCTGCAGCTG+AGG 0.459683 tig0010965:-16509 Msa1349500:CDS
TGGAACTGAGGCTGCAGCTG+AGG 0.459683 tig0010965:-6837 Msa1349500:CDS
AATGGAACAAAAGATTGATC+AGG 0.460600 tig0010965:+9125 None:intergenic
TAGTACCATGGTTGAGGTTG+TGG 0.461334 tig0010965:+15606 None:intergenic
TCATCAATGTTGGGAGCGTC+CGG 0.461447 tig0010965:-16581 Msa1349500:CDS
CCGAAAGGATGAACTGTTAT+GGG 0.463366 tig0010965:-16141 Msa1349500:intron
CAGATACAGTCTTGGAATCA+TGG 0.464460 tig0010965:-10608 Msa1349500:CDS
ATTCATGTGGGTGCTATTGT+TGG 0.466637 tig0010965:-5379 Msa1349500:CDS
TTACAGTCAGCTTATTGAGT+TGG 0.467244 tig0010965:-17068 Msa1349500:CDS
AAGCAGTGTCTGAATTCAGC+TGG 0.468104 tig0010965:-6226 Msa1349500:CDS
GAAACGCAGATCATAATTGT+TGG 0.470658 tig0010965:-6919 Msa1349500:CDS
ACATCTGTTCCCTTCTCAAA+AGG 0.472732 tig0010965:-10775 Msa1349500:CDS
TAGATGAAGAGAAATAGTTC+TGG 0.473162 tig0010965:+5416 None:intergenic
TGATAAGTGGTTTGATCTTG+TGG 0.474558 tig0010965:-18073 Msa1349500:CDS
GCGGGTGATAATGTGAAGTT+TGG 0.476392 tig0010965:-7238 Msa1349500:CDS
TTCAACGACTTGCTGAAGAT+AGG 0.476746 tig0010965:-9845 Msa1349500:CDS
GCCATCATTGCACCCCACTT+TGG 0.479110 tig0010965:+5438 None:intergenic
TTGAGATATGATTGAAGGGA+TGG 0.481296 tig0010965:+5465 None:intergenic
TTACGGTGAGCTTGTTGAGT+TGG 0.481846 tig0010965:-7201 Msa1349500:CDS
GCCAAAGTGGGGTGCAATGA+TGG 0.482616 tig0010965:-5439 Msa1349500:CDS
GCAGGTTGAGATATGATTGA+AGG 0.483094 tig0010965:+5460 None:intergenic
TGCAAAGGCTCTAATTTCAG+AGG 0.483766 tig0010965:+5672 None:intergenic
GCCATGAGTAGTAAGAATAA+TGG 0.485231 tig0010965:-18047 Msa1349500:CDS
CAATCAACAGCCTCTTTGCC+CGG 0.486621 tig0010965:+10095 None:intergenic
TGTCATACATGGTGGGATAT+GGG 0.486645 tig0010965:-5525 Msa1349500:CDS
TAGCACCATGGTTGAGGTTG+TGG 0.489282 tig0010965:+5765 None:intergenic
CAGAGTACGAGCAGTAAAAT+GGG 0.494790 tig0010965:+6451 None:intergenic
TACAACTATGCAGATGCTCT+TGG 0.494973 tig0010965:-17972 Msa1349500:CDS
ATATGAAAGTGAGATTTCTT+CGG 0.496777 tig0010965:-7167 Msa1349500:CDS
AACAAAAGCAGCATTCATAT+AGG 0.500246 tig0010965:+5291 None:intergenic
TGCTATATCAGATTTGCCTC+TGG 0.502873 tig0010965:-11993 Msa1349500:intron
AAGATTGATTCGAATTCCCC+TGG 0.503739 tig0010965:-6857 Msa1349500:CDS
TTAGCTGTGATAAGAATGCT+TGG 0.504181 tig0010965:+9807 None:intergenic
AAATTTGGAAGTGTAGGAAT+GGG 0.504401 tig0010965:-9350 Msa1349500:CDS
ACACTGCTTGACTCCAACCT+TGG 0.505167 tig0010965:+6240 None:intergenic
CAAATTTGGAAGTGTAGGAA+TGG 0.507265 tig0010965:-9351 Msa1349500:CDS
ATGTCAAGTGGTTAGGACTA+CGG 0.508401 tig0010965:-9169 Msa1349500:CDS
AAGATTGATGCTAATTCCCC+TGG 0.508528 tig0010965:-16529 Msa1349500:CDS
AAACGCAGATCATCAATGTT+GGG 0.510319 tig0010965:-16590 Msa1349500:CDS
CCAGAGTACGAGCAGTAGAA+TGG 0.510375 tig0010965:+16269 None:intergenic
CTACAGATCAAAACAACTCC+TGG 0.510497 tig0010965:-15774 Msa1349500:intron
GGAATTCTATGGCGGGAAGA+AGG 0.510525 tig0010965:-6036 Msa1349500:CDS
GAAACGCAGATCATCAATGT+TGG 0.511702 tig0010965:-16591 Msa1349500:CDS
AGAGGCAAATCTGATATAGC+AGG 0.512099 tig0010965:+11995 None:intergenic
CACGGCGGAGATAATCAATC+TGG 0.513292 tig0010965:+17007 None:intergenic
TTTATATGTGCATTGATGCC+AGG 0.514115 tig0010965:-15807 Msa1349500:CDS
TTTATATGTGCATTGATGCC+AGG 0.514115 tig0010965:-5981 Msa1349500:CDS
TGCAGCAAAAGCCTTTGTTA+GGG 0.514233 tig0010965:-10981 Msa1349500:CDS
ACGCTGCCTGATTCCAACCT+TGG 0.518138 tig0010965:+16057 None:intergenic
GTGATAATGTGAAGTTTGGT+TGG 0.518804 tig0010965:-7234 Msa1349500:CDS
TGCACGTTACATTATAATTG+TGG 0.520666 tig0010965:-9997 Msa1349500:CDS
AATGAATAGCACCATGGTTG+AGG 0.521095 tig0010965:+5759 None:intergenic
CAGCTGCAGCCTCAGTTCCA+GGG 0.523289 tig0010965:+16512 None:intergenic
CAGCTGCAGCCTCAGTTCCA+GGG 0.523289 tig0010965:+6840 None:intergenic
GGCTGCTTCTTGGCTATACA+AGG 0.523550 tig0010965:-6303 Msa1349500:CDS
AAACGCAGATCATAATTGTT+GGG 0.523983 tig0010965:-6918 Msa1349500:CDS
GGAATTCTATGGTGGGAAGA+AGG 0.526288 tig0010965:-15862 Msa1349500:CDS
CTTTGGCAGGTGAATCTGGT+TGG 0.527930 tig0010965:-17141 Msa1349500:intron
CATGTGGGTGCTATTGTTGG+AGG 0.529821 tig0010965:-5376 Msa1349500:CDS
GACGTCCAGCAATGAGTCCT+CGG 0.532340 tig0010965:+10578 None:intergenic
CAAATATAGAGGTTCTTACT+CGG 0.533103 tig0010965:-6481 Msa1349500:CDS
GTTGGAGGATACTACGACGC+GGG 0.534176 tig0010965:-7256 Msa1349500:CDS
ATCATATACAGGAATCCAGC+TGG 0.534408 tig0010965:-9395 Msa1349500:intron
TGGCAGGTGAATCTGGTTGG+AGG 0.535694 tig0010965:-17138 Msa1349500:intron
AGCAACAGTCGAGTGAATCA+TGG 0.537494 tig0010965:-11073 Msa1349500:CDS
TAGAGCCTTTGCAAAATCAC+AGG 0.537879 tig0010965:-5662 Msa1349500:intron
CATATCTCAACCTGCCAAAG+TGG 0.541021 tig0010965:-5452 Msa1349500:CDS
CTTGGCTATACAAGGCTAGT+GGG 0.541408 tig0010965:-6295 Msa1349500:CDS
AATGAATAGTACCATGGTTG+AGG 0.541527 tig0010965:+15600 None:intergenic
TGCTAATTCCCCTGGAACTG+AGG 0.542113 tig0010965:-16521 Msa1349500:CDS
TTACATTATAATTGTGGAGA+AGG 0.542451 tig0010965:-9991 Msa1349500:intron
ATATCTCAACCTGCCAAAGT+GGG 0.542805 tig0010965:-5451 Msa1349500:CDS
TCCAAATCCTAATATTCATG+TGG 0.544345 tig0010965:-5392 Msa1349500:CDS
ATCTAGCTTGCAATGTCAAG+TGG 0.548170 tig0010965:-9181 Msa1349500:intron
CGGTGCAGCAGATACAGTCT+TGG 0.548380 tig0010965:-10616 Msa1349500:CDS
CATAGTATAGCTAATCCAGC+TGG 0.548566 tig0010965:+9380 None:intergenic
TTCGAATTCCCCTGGAACTG+AGG 0.548903 tig0010965:-6849 Msa1349500:CDS
TGCAAAGGCTCTGATTTCAG+AGG 0.549636 tig0010965:+15513 None:intergenic
CTTCGCAGTGCTATTCGTTG+GGG 0.551133 tig0010965:-7127 Msa1349500:CDS
TCAAGAAAATTGAAGAGTCT+CGG 0.553231 tig0010965:+5234 None:intergenic
AAAGATTGATCAGGCAGCAT+GGG 0.554309 tig0010965:+9134 None:intergenic
CAGAGCCTTTGCAAAATCAC+AGG 0.555689 tig0010965:-15503 Msa1349500:intron
ACCTTCAAATTTGGAAGTGT+AGG 0.557222 tig0010965:-9356 Msa1349500:CDS
AGTACCTTGTGGCAATATCT+GGG 0.558092 tig0010965:+9778 None:intergenic
GGAGACTCAGCTCTCTCTGA+TGG 0.562146 tig0010965:-17879 Msa1349500:CDS
GCTGTTGATTGCTCTGTGTG+TGG 0.562822 tig0010965:-10083 Msa1349500:CDS
GTTGGAGGATACTATGATGC+TGG 0.563188 tig0010965:-17123 Msa1349500:CDS
ACATCACAGATAACCAAGGT+TGG 0.565178 tig0010965:-16070 Msa1349500:CDS
AAAAGATTGATCAGGCAGCA+TGG 0.565462 tig0010965:+9133 None:intergenic
CACTGCGAAGATAATCAAGC+TGG 0.565610 tig0010965:+7140 None:intergenic
AAATATAGAGGTTCTTACTC+GGG 0.568349 tig0010965:-6480 Msa1349500:CDS
GCAAAGGCTCTAATTTCAGA+GGG 0.569361 tig0010965:+5673 None:intergenic
TCTCTGATTCCATATCTACA+AGG 0.569481 tig0010965:-11021 Msa1349500:CDS
TGTGATTGCTAGGTGGGAGA+TGG 0.571605 tig0010965:-6941 Msa1349500:intron
TTGGGAGCGTCCGGAAGACA+TGG 0.572244 tig0010965:-16572 Msa1349500:CDS
TTTCTCACATGTAGTGTGGA+AGG 0.576245 tig0010965:-10883 Msa1349500:intron
TTCTCAAGGAATTCTATGGC+GGG 0.576719 tig0010965:-6043 Msa1349500:intron
ACATCACAAGTAACCAAGGT+TGG 0.578483 tig0010965:-6253 Msa1349500:CDS
TGCATAGTTGTAACTAGATG+AGG 0.579774 tig0010965:+17983 None:intergenic
GGCTGCTGCTTGGTTATACA+AGG 0.582101 tig0010965:-16120 Msa1349500:CDS
GGCCTAGAGTCATACAGATA+CGG 0.582165 tig0010965:-9329 Msa1349500:intron
TACCGTATCTGTATGACTCT+AGG 0.583256 tig0010965:+9327 None:intergenic
TTTCTCAAGGAATTCTATGG+CGG 0.583307 tig0010965:-6044 Msa1349500:intron
TCTTGGCTATACAAGGCTAG+TGG 0.585201 tig0010965:-6296 Msa1349500:CDS
TCTATTAGCCATAATGGATG+AGG 0.585271 tig0010965:-18024 Msa1349500:CDS
AGCTGCAGCCTCAGTTCCAG+GGG 0.585982 tig0010965:+16513 None:intergenic
AGCTGCAGCCTCAGTTCCAG+GGG 0.585982 tig0010965:+6841 None:intergenic
GACGTCAATAGGACAATCCA+AGG 0.586011 tig0010965:-10753 Msa1349500:intron
GACCAAAGAGTGAAGTGGAG+GGG 0.590017 tig0010965:-17900 Msa1349500:CDS
AAGCTGACTGTAAATGACAT+TGG 0.590276 tig0010965:+17078 None:intergenic
TTGGGAGCGTCCAGAAGACA+TGG 0.591746 tig0010965:-6900 Msa1349500:CDS
ACCAACCACGCTCTTTACAC+AGG 0.592498 tig0010965:-7074 Msa1349500:intron
GTGATAATGTGAAGTTTGGA+TGG 0.592513 tig0010965:-17101 Msa1349500:CDS
GGAGAAAATGAATAGTACCA+TGG 0.593160 tig0010965:+15594 None:intergenic
CTACAGATTAGAACAACTCC+AGG 0.598543 tig0010965:-5948 Msa1349500:intron
GGGCTTCTGTATATTAGAGA+TGG 0.598637 tig0010965:-5805 Msa1349500:CDS
ACATGTAGTGTGGAAGGTGA+TGG 0.599139 tig0010965:-10877 Msa1349500:intron
AAGTATAGAGGCACCTACAC+GGG 0.600830 tig0010965:-16299 Msa1349500:CDS
AGACCAAAGAGTGAAGTGGA+GGG 0.601742 tig0010965:-17901 Msa1349500:CDS
CCAAATCCTAATATTCATGT+GGG 0.601860 tig0010965:-5391 Msa1349500:CDS
CAGGTTGAGATATGATTGAA+GGG 0.604313 tig0010965:+5461 None:intergenic
ACCATGTATGACATCTTCAT+GGG 0.604739 tig0010965:+5535 None:intergenic
TGAAATTGGTAGAGCCACAA+TGG 0.606299 tig0010965:+15539 None:intergenic
TCCCATGAAGATGTCATACA+TGG 0.607679 tig0010965:-5536 Msa1349500:CDS
CATATTGATGGAATCCATTG+TGG 0.608291 tig0010965:-15553 Msa1349500:CDS
CTCCGCCGTGCTATTCGTTG+GGG 0.608919 tig0010965:-16994 Msa1349500:intron
GCAGCATTCATATAGGTGGT+AGG 0.611057 tig0010965:+5298 None:intergenic
CAAGTATAGAGGCACCTACA+CGG 0.612002 tig0010965:-16300 Msa1349500:CDS
AGCTCAAACATTACTAACAC+AGG 0.615406 tig0010965:-6186 Msa1349500:intron
TTTACTAGGAATTCTATGGT+GGG 0.615507 tig0010965:-15869 Msa1349500:intron
AAAAGCAGCATTCATATAGG+TGG 0.619409 tig0010965:+5294 None:intergenic
ACCTGTGTAAAGAGCGTGGT+TGG 0.623720 tig0010965:+7073 None:intergenic
TTAGCCAAGATTCATAGTGA+TGG 0.625051 tig0010965:-15837 Msa1349500:CDS
AATTGAAGCAGCAGAAAGAG+CGG 0.625859 tig0010965:+6808 None:intergenic
AGTTCAAACATTACTAACAC+AGG 0.627457 tig0010965:-16003 Msa1349500:intron
TTAGCCAAGATTAAGACTGA+TGG 0.628467 tig0010965:-6011 Msa1349500:CDS
AGCAGTGTCTGAATTCAGCT+GGG 0.628902 tig0010965:-6225 Msa1349500:CDS
ATGAAGATGTCATACATGGT+GGG 0.629064 tig0010965:-5532 Msa1349500:CDS
GGAAAAGCGTGTCACACAGA+GGG 0.629500 tig0010965:-10829 Msa1349500:CDS
AGGAAAAGCGTGTCACACAG+AGG 0.631813 tig0010965:-10830 Msa1349500:CDS
AAAGGCTCTAATTTCAGAGG+GGG 0.637646 tig0010965:+5675 None:intergenic
GCAGCAAAAGCCTTTGTTAG+GGG 0.641137 tig0010965:-10980 Msa1349500:intron
AAGACCAAAGAGTGAAGTGG+AGG 0.641884 tig0010965:-17902 Msa1349500:CDS
TGTCTAGGAACCGGGCAAAG+AGG 0.645931 tig0010965:-10105 Msa1349500:intron
TTGGCTATACAAGGCTAGTG+GGG 0.646701 tig0010965:-6294 Msa1349500:CDS
GGCAGCGTCTGAGTTCAGCT+GGG 0.647866 tig0010965:-16042 Msa1349500:CDS
GAATGGACAAGAACCCGTGT+AGG 0.649143 tig0010965:+16286 None:intergenic
GGAATCATGGCATCTAGCCG+AGG 0.649904 tig0010965:-10595 Msa1349500:CDS
CATGAAGATGTCATACATGG+TGG 0.650028 tig0010965:-5533 Msa1349500:CDS
GGAGAAAATGAATAGCACCA+TGG 0.650294 tig0010965:+5753 None:intergenic
CTAAAGACCAAAGAGTGAAG+TGG 0.653325 tig0010965:-17905 Msa1349500:CDS
GAGGCAAATCTGATATAGCA+GGG 0.653852 tig0010965:+11996 None:intergenic
ATATACCACAACCTCAACCA+TGG 0.660137 tig0010965:-5770 Msa1349500:CDS
TATCTCAACCTGCCAAAGTG+GGG 0.664840 tig0010965:-5450 Msa1349500:CDS
ATACACCACAACCTCAACCA+TGG 0.664872 tig0010965:-15611 Msa1349500:CDS
AAGCTCACCGTAAAAGACAT+CGG 0.669269 tig0010965:+7211 None:intergenic
GCTTGGTTATACAAGGCCAG+TGG 0.674115 tig0010965:-16113 Msa1349500:CDS
CATATTGATGGAATTCAGTG+TGG 0.674538 tig0010965:-5712 Msa1349500:CDS
GTTTACCGGTAAGATTCTCG+AGG 0.676678 tig0010965:+9064 None:intergenic
TTGTACCCCAACGAATAGCA+CGG 0.684450 tig0010965:+16989 None:intergenic
TCACACCTGTGTAAAGAGCG+TGG 0.687393 tig0010965:+7069 None:intergenic
GTCAAGTGGTTAGGACTACG+GGG 0.694106 tig0010965:-9167 Msa1349500:CDS
ACGTACATCACAAGTAACCA+AGG 0.694288 tig0010965:-6257 Msa1349500:CDS
CAAAGGCTCTAATTTCAGAG+GGG 0.704501 tig0010965:+5674 None:intergenic
AAGTACATCACAGATAACCA+AGG 0.712270 tig0010965:-16074 Msa1349500:CDS
CCAAAACAATTACATCACAG+AGG 0.744075 tig0010965:-5493 Msa1349500:CDS
TCAAGTGGTTAGGACTACGG+GGG 0.757266 tig0010965:-9166 Msa1349500:CDS
GTTACCCAGATATTGCCACA+AGG 0.776810 tig0010965:-9782 Msa1349500:intron
GGTTGGAGGATACTACGACG+CGG 0.797840 tig0010965:-7257 Msa1349500:CDS
TACCCCAACGAATAGCACGG+CGG 0.808256 tig0010965:+16992 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATATTTTTTTTTTTTAA+TGG + tig0010965:16718-16737 None:intergenic 0.0%
!!! AAATGTTTTTAATAATTTGA+TGG - tig0010965:5879-5898 Msa1349500:intron 10.0%
!!! TTTAATTTATATACAATGTT+TGG + tig0010965:5969-5988 None:intergenic 10.0%
!! AGTAAAAAAAATATTATGAT+CGG - tig0010965:6108-6127 Msa1349500:intron 10.0%
!!! TACTTTTTTTTTTTTTTACT+AGG - tig0010965:7440-7459 Msa1349500:intron 10.0%
!! TAGTCTTTATTATAAATTAT+AGG - tig0010965:8447-8466 Msa1349500:intron 10.0%
!!! TTTATTCTAACTTTATTTTA+GGG - tig0010965:8775-8794 Msa1349500:intron 10.0%
!!! AACTAAAATTTGATTTATTT+CGG - tig0010965:10429-10448 Msa1349500:intron 10.0%
!! TTTAATCATAATAATTAATC+AGG - tig0010965:10598-10617 Msa1349500:CDS 10.0%
!!! TTTATTTATTAGTATCATTT+TGG + tig0010965:10631-10650 None:intergenic 10.0%
!!! ATAAATTAAATTTTAGTTAG+AGG - tig0010965:10780-10799 Msa1349500:CDS 10.0%
!!! ATGATTTTTATTTAAGATTT+TGG + tig0010965:17594-17613 None:intergenic 10.0%
!! TTAAATAAAAATCATATTGA+TGG - tig0010965:17599-17618 Msa1349500:intron 10.0%
!!! ATGATTTTTATTTAGGATTT+TGG + tig0010965:7753-7772 None:intergenic 15.0%
!!! CATCAATATGATTTTTATTT+AGG + tig0010965:7760-7779 None:intergenic 15.0%
!! CTAAATAAAAATCATATTGA+TGG - tig0010965:7758-7777 Msa1349500:intron 15.0%
!!! AAGTAGTAAAATAATTTGTT+AGG - tig0010965:8391-8410 Msa1349500:intron 15.0%
!! TATATATAATCAAATCATAC+CGG - tig0010965:8682-8701 Msa1349500:intron 15.0%
!!! GTTTATTCTAACTTTATTTT+AGG - tig0010965:8774-8793 Msa1349500:intron 15.0%
!!! TTATTCTAACTTTATTTTAG+GGG - tig0010965:8776-8795 Msa1349500:intron 15.0%
!! TAAAAATAACAAGGAATATA+AGG - tig0010965:9172-9191 Msa1349500:CDS 15.0%
!! TTAAGAAGATAAATAGTTAT+GGG + tig0010965:9538-9557 None:intergenic 15.0%
!!! TTTTTTAAATGTCGTTTTAT+CGG + tig0010965:9671-9690 None:intergenic 15.0%
!! GACATTTAAAAAATAACTAA+GGG - tig0010965:9678-9697 Msa1349500:intron 15.0%
!! TCTAACTATTTAATTAGTAT+CGG - tig0010965:10395-10414 Msa1349500:intron 15.0%
!!! ATAAATCAAATTTTAGTTAG+AGG + tig0010965:10427-10446 None:intergenic 15.0%
!!! TTTTATTCAAATAAACGTTA+GGG - tig0010965:10496-10515 Msa1349500:intron 15.0%
!! ATACTAATAAATAAAGTTAG+AGG - tig0010965:10636-10655 Msa1349500:CDS 15.0%
!! TTTATTTATTAGTATCAGTT+TGG + tig0010965:10663-10682 None:intergenic 15.0%
!! ATACTAATAAATAAAGTTAG+AGG - tig0010965:10636-10655 Msa1349500:CDS 15.0%
!!! AGTTTATTGTTTTTTTTTCA+AGG + tig0010965:10911-10930 None:intergenic 15.0%
!! TAGAACTAATTAACTTAAAA+CGG + tig0010965:11410-11429 None:intergenic 15.0%
!!! AGTTAATTAGTTCTAATTAA+CGG - tig0010965:11415-11434 Msa1349500:intron 15.0%
!! TAACAAAGTAATGAAAATTA+AGG + tig0010965:11568-11587 None:intergenic 15.0%
!! ATTATCAAATCATTTACAAT+TGG + tig0010965:12049-12068 None:intergenic 15.0%
!!! TTCACCTTAATTTTTTTTTT+TGG - tig0010965:12148-12167 Msa1349500:intron 15.0%
!! TGTTAAAAATCTTCATAATT+TGG - tig0010965:13879-13898 Msa1349500:intron 15.0%
!!! TTTTACATATGATTCTTTTA+TGG + tig0010965:14496-14515 None:intergenic 15.0%
!! AATAATACAGTTAACTATTT+AGG - tig0010965:14943-14962 Msa1349500:intron 15.0%
!! AAGATTATAAAATATGGAAT+GGG + tig0010965:15498-15517 None:intergenic 15.0%
!! AAAGATTATAAAATATGGAA+TGG + tig0010965:15499-15518 None:intergenic 15.0%
!! ATGAGAAAGATTATAAAATA+TGG + tig0010965:15504-15523 None:intergenic 15.0%
!! TAAAATGTATACATTATCAT+AGG + tig0010965:16290-16309 None:intergenic 15.0%
!!! AATGTTTTATTTTTTACAAG+AGG + tig0010965:16917-16936 None:intergenic 15.0%
!!! ATTTTAAATTGTGTATGAAA+AGG - tig0010965:16984-17003 Msa1349500:intron 15.0%
!! ATTATAGTGAGATTAGAATA+TGG - tig0010965:5569-5588 Msa1349500:intron 20.0%
!! TTATAGTGAGATTAGAATAT+GGG - tig0010965:5570-5589 Msa1349500:intron 20.0%
!! ACTTTAATTAGTCATAATCA+TGG + tig0010965:6091-6110 None:intergenic 20.0%
!! TCATGTGTATTATATATCTT+TGG - tig0010965:6165-6184 Msa1349500:intron 20.0%
!! TTAAGTTATTTATCCGTAAA+GGG + tig0010965:6421-6440 None:intergenic 20.0%
!! ATTAAGTTATTTATCCGTAA+AGG + tig0010965:6422-6441 None:intergenic 20.0%
!! TATATCAGATTGTTACTATA+TGG + tig0010965:7375-7394 None:intergenic 20.0%
!! TTAATGAGTTAATTCTTTCT+TGG + tig0010965:7417-7436 None:intergenic 20.0%
!!! TTTTTTTACTAGGAATTCTA+TGG - tig0010965:7450-7469 Msa1349500:intron 20.0%
!! ATGAAGCAAAATAAAGAAAT+GGG + tig0010965:7884-7903 None:intergenic 20.0%
!! TATGAAGCAAAATAAAGAAA+TGG + tig0010965:7885-7904 None:intergenic 20.0%
!! TTAAATTGGTCATTAAAATC+AGG + tig0010965:8156-8175 None:intergenic 20.0%
!!! AATAATTTGTTAGGAACATA+AGG - tig0010965:8400-8419 Msa1349500:intron 20.0%
!! TATAGGAAAATGCTAATATA+TGG - tig0010965:8464-8483 Msa1349500:intron 20.0%
!! AAAATTGAAAAATGAGTACA+AGG - tig0010965:8967-8986 Msa1349500:intron 20.0%
!!! TTTTCTTGTTATGTTATAGT+GGG + tig0010965:9008-9027 None:intergenic 20.0%
!!! TTTTTCTTGTTATGTTATAG+TGG + tig0010965:9009-9028 None:intergenic 20.0%
!! ACATAAGTCATAAACTAATT+AGG - tig0010965:9100-9119 Msa1349500:CDS 20.0%
!!! CATTCTTAAAAGTGATTTTT+GGG + tig0010965:9268-9287 None:intergenic 20.0%
!!! TCATTCTTAAAAGTGATTTT+TGG + tig0010965:9269-9288 None:intergenic 20.0%
!! TGAAAAGTAGCAAAAATTAA+CGG + tig0010965:9487-9506 None:intergenic 20.0%
!! TAAATAGTTATGGGTAATAT+AGG + tig0010965:9529-9548 None:intergenic 20.0%
!! GTTAAGAAGATAAATAGTTA+TGG + tig0010965:9539-9558 None:intergenic 20.0%
!! CGACATTTAAAAAATAACTA+AGG - tig0010965:9677-9696 Msa1349500:intron 20.0%
!!! ACATTTACATGTTTAAGATA+AGG + tig0010965:9799-9818 None:intergenic 20.0%
!! ATCTTAAGAAATTAGGAATT+TGG + tig0010965:10063-10082 None:intergenic 20.0%
!! AGAAAAATCACAATAGAATT+TGG + tig0010965:10272-10291 None:intergenic 20.0%
!! TAGATGAATGAATATATTTG+AGG - tig0010965:10297-10316 Msa1349500:intron 20.0%
!! TTAGGATAAAAGTTTAAACT+TGG - tig0010965:10338-10357 Msa1349500:intron 20.0%
!! GATACTAATTAAATAGTTAG+AGG + tig0010965:10396-10415 None:intergenic 20.0%
!! TTTGAATAAAACTAACAGAA+AGG + tig0010965:10487-10506 None:intergenic 20.0%
!!! GTTTTATTCAAATAAACGTT+AGG - tig0010965:10495-10514 Msa1349500:intron 20.0%
!! GATATTATTAGTAACTGTTA+TGG + tig0010965:10570-10589 None:intergenic 20.0%
!!! CTTTCTCTTTTGAATTATTT+TGG + tig0010965:10747-10766 None:intergenic 20.0%
!! TAATTCAAAAGAGAAAGTTT+AGG - tig0010965:10750-10769 Msa1349500:intron 20.0%
!! AATTCAAAAGAGAAAGTTTA+GGG - tig0010965:10751-10770 Msa1349500:intron 20.0%
!! TCAAACTATTTACTTAGTAT+CGG + tig0010965:10812-10831 None:intergenic 20.0%
!! AATTAAGCCAAAATAAAACA+TGG - tig0010965:10846-10865 Msa1349500:CDS 20.0%
!! ATTAAGCCAAAATAAAACAT+GGG - tig0010965:10847-10866 Msa1349500:CDS 20.0%
!! TACAATTGAATCTATGAAAA+GGG + tig0010965:11370-11389 None:intergenic 20.0%
!! TTACAATTGAATCTATGAAA+AGG + tig0010965:11371-11390 None:intergenic 20.0%
!! CAAGCCAAAAAAAAAAATTA+AGG + tig0010965:12155-12174 None:intergenic 20.0%
!!! TTTGAATCTGTTCATTTTAT+AGG + tig0010965:12222-12241 None:intergenic 20.0%
!! GAGAAAAACATATGATAATT+CGG + tig0010965:12284-12303 None:intergenic 20.0%
!!! ACATTTTTTTAGATTCCTTA+TGG - tig0010965:12873-12892 Msa1349500:intron 20.0%
!! AATAAACTTAAAACAGCTTA+TGG + tig0010965:12917-12936 None:intergenic 20.0%
!! AAACTATCATAAAAAGCTTA+TGG + tig0010965:12941-12960 None:intergenic 20.0%
!!! TCTAAACAAGTCTTTTTATA+TGG - tig0010965:13095-13114 Msa1349500:intron 20.0%
!!! ATGAAGATTTTTAACAAGAT+TGG + tig0010965:13875-13894 None:intergenic 20.0%
!! ATTTAAACTTCATCATATAC+AGG - tig0010965:13917-13936 Msa1349500:intron 20.0%
!! TTCATTCAAGCATATTAATT+TGG + tig0010965:14091-14110 None:intergenic 20.0%
!! GAATTGTGTATCTATAATAT+TGG - tig0010965:14452-14471 Msa1349500:intron 20.0%
!! CAACTCATAAATTAACTAAA+TGG - tig0010965:14554-14573 Msa1349500:intron 20.0%
!! TTTCATGGATATGATTATTT+GGG - tig0010965:14656-14675 Msa1349500:intron 20.0%
!! GAGTACAAGTTATATATAAT+CGG + tig0010965:14711-14730 None:intergenic 20.0%
!!! CACTTTGAAAAATATTTACA+AGG + tig0010965:14989-15008 None:intergenic 20.0%
!! GATATTTAATAGTCATTGTT+GGG + tig0010965:15250-15269 None:intergenic 20.0%
!! TGATATTTAATAGTCATTGT+TGG + tig0010965:15251-15270 None:intergenic 20.0%
!!! AAGTTGATATTCATAGAAAA+AGG - tig0010965:15300-15319 Msa1349500:intron 20.0%
!! AGATTATAAAATATGGAATG+GGG + tig0010965:15497-15516 None:intergenic 20.0%
!!! CAAAATTGTGGTTAAATTTT+AGG + tig0010965:15938-15957 None:intergenic 20.0%
!! TTTCATAGATCATTCATTTA+TGG - tig0010965:16956-16975 Msa1349500:intron 20.0%
!! TTTACTAAAAGAATACAGTT+TGG + tig0010965:17203-17222 None:intergenic 20.0%
!! TTTAGTAAACATTAGTTCAA+AGG - tig0010965:17214-17233 Msa1349500:intron 20.0%
!!! TATTATTTTGTTGTTAACTC+AGG - tig0010965:17494-17513 Msa1349500:intron 20.0%
!!! TTCTAAAATATCAAACTCAT+TGG - tig0010965:17707-17726 Msa1349500:intron 20.0%
! AATTAATTCCTCATCCATTA+TGG + tig0010965:5310-5329 None:intergenic 25.0%
!! AGTTAAGTTTTTAATGCATG+AGG - tig0010965:5601-5620 Msa1349500:intron 25.0%
!! GTTAAGTTTTTAATGCATGA+GGG - tig0010965:5602-5621 Msa1349500:intron 25.0%
!! TTAAGTTTTTAATGCATGAG+GGG - tig0010965:5603-5622 Msa1349500:intron 25.0%
! TGATCAAGAAATCTATCAAA+AGG - tig0010965:5705-5724 Msa1349500:CDS 25.0%
! GATCAAGAAATCTATCAAAA+GGG - tig0010965:5706-5725 Msa1349500:CDS 25.0%
! ATCAAGAAATCTATCAAAAG+GGG - tig0010965:5707-5726 Msa1349500:CDS 25.0%
! AGTCATAGGTAAAGTAATTA+AGG + tig0010965:6143-6162 None:intergenic 25.0%
! GTACTTTGTCATGATATATA+GGG + tig0010965:6605-6624 None:intergenic 25.0%
! AGTACTTTGTCATGATATAT+AGG + tig0010965:6606-6625 None:intergenic 25.0%
! AAATGAATGAGAATGATACT+AGG + tig0010965:7137-7156 None:intergenic 25.0%
! GTATCATTCTCATTCATTTA+TGG - tig0010965:7138-7157 Msa1349500:CDS 25.0%
! ATTATATTTGTAGTGTTACC+AGG + tig0010965:7570-7589 None:intergenic 25.0%
!!! ATTTGCTATATTGTTAACTC+AGG - tig0010965:7653-7672 Msa1349500:intron 25.0%
! AATATTAGGATTAGGATTAG+AGG + tig0010965:8109-8128 None:intergenic 25.0%
!!! AAGAAGTTGCATTTTAATTG+CGG + tig0010965:8641-8660 None:intergenic 25.0%
!!! TATAGTCTATTCTAAAACAC+AGG - tig0010965:8882-8901 Msa1349500:intron 25.0%
! TTATGTTAACCCTCTATTAT+GGG + tig0010965:9086-9105 None:intergenic 25.0%
!!! TTCCTTGTTATTTTTAGTTG+TGG + tig0010965:9168-9187 None:intergenic 25.0%
! TTTCTCATAATGTAAAGGAA+GGG - tig0010965:9198-9217 Msa1349500:intron 25.0%
! ACTTAAATATCACCTTGAAA+AGG + tig0010965:9327-9346 None:intergenic 25.0%
! ACACAAAACCTAATAATGTT+GGG + tig0010965:9372-9391 None:intergenic 25.0%
! AACACAAAACCTAATAATGT+TGG + tig0010965:9373-9392 None:intergenic 25.0%
! AAACTTAAAACGATAGTGTT+GGG + tig0010965:9444-9463 None:intergenic 25.0%
!! TAAATAAGTAGGGACAATTT+TGG - tig0010965:9581-9600 Msa1349500:intron 25.0%
! TAAAAAATAACTAAGGGAGT+AGG - tig0010965:9684-9703 Msa1349500:intron 25.0%
! ACATGTCAATTCAAATAAGT+GGG + tig0010965:9767-9786 None:intergenic 25.0%
! TATCTCGATCTTAAGAAATT+AGG + tig0010965:10070-10089 None:intergenic 25.0%
! AAATAGTTAGAGGACAAAAA+AGG + tig0010965:10386-10405 None:intergenic 25.0%
!!! CTATTTAATTAGTATCGGTT+TGG - tig0010965:10400-10419 Msa1349500:intron 25.0%
!!! TGGTCTTTTCTATTAGTTTT+TGG + tig0010965:10695-10714 None:intergenic 25.0%
! GATACTAAGTAAATAGTTTG+AGG - tig0010965:10811-10830 Msa1349500:CDS 25.0%
! AATAGTTTGAGGACAAAAAA+AGG - tig0010965:10822-10841 Msa1349500:CDS 25.0%
!!! TTCATTCCCATGTTTTATTT+TGG + tig0010965:10856-10875 None:intergenic 25.0%
! TTAAAAGAGAAACTAGAAAG+AGG + tig0010965:11218-11237 None:intergenic 25.0%
!! ATTTTCAAATTCACTGTTCT+AGG - tig0010965:11476-11495 Msa1349500:intron 25.0%
! GAGAAAAACATATGATAATC+TGG + tig0010965:11699-11718 None:intergenic 25.0%
! ATAAACCTCAAAGTCTAAAA+TGG + tig0010965:12075-12094 None:intergenic 25.0%
! CTCAGAAACACAAAAATTAT+TGG + tig0010965:12413-12432 None:intergenic 25.0%
!!! TAATTTTTGTGTTTCTGAGT+TGG - tig0010965:12414-12433 Msa1349500:intron 25.0%
! TAACTGATTATAGATAACCT+TGG + tig0010965:12590-12609 None:intergenic 25.0%
! ATTTCAATATCCTAGAATGA+AGG + tig0010965:12795-12814 None:intergenic 25.0%
! AGCTTATTAGAGTTAATCTA+CGG - tig0010965:12836-12855 Msa1349500:intron 25.0%
! ACTTATATGATAAACGCTTA+GGG - tig0010965:13047-13066 Msa1349500:intron 25.0%
! TTACATTATAATTGTGGAGA+AGG - tig0010965:13332-13351 Msa1349500:intron 25.0%
! TCAAATTAGCATGATGTAAT+TGG + tig0010965:13387-13406 None:intergenic 25.0%
! AAAACGTATCTTTCTTTGTT+AGG + tig0010965:13426-13445 None:intergenic 25.0%
! TAATAATGCGATATCTGATA+TGG + tig0010965:13666-13685 None:intergenic 25.0%
! AAAGTTGTAATTCAGAACAA+AGG + tig0010965:13812-13831 None:intergenic 25.0%
! TGCAAATAAAAAATTCCTCA+AGG + tig0010965:14120-14139 None:intergenic 25.0%
! ACAGCATAATATGTTAGTAA+GGG + tig0010965:14307-14326 None:intergenic 25.0%
! AACAGCATAATATGTTAGTA+AGG + tig0010965:14308-14327 None:intergenic 25.0%
!! AATTCTTGTATGAACCATTT+TGG - tig0010965:14330-14349 Msa1349500:intron 25.0%
! TTAACTAAATGGTTCTTAAC+AGG - tig0010965:14565-14584 Msa1349500:intron 25.0%
!! ATCATATCCATGAAAGTATA+GGG + tig0010965:14651-14670 None:intergenic 25.0%
!! AATCATATCCATGAAAGTAT+AGG + tig0010965:14652-14671 None:intergenic 25.0%
! CTTTCATGGATATGATTATT+TGG - tig0010965:14655-14674 Msa1349500:intron 25.0%
! TTCATGGATATGATTATTTG+GGG - tig0010965:14657-14676 Msa1349500:intron 25.0%
! CAATGTTGCATAAAAAAAAC+CGG - tig0010965:14764-14783 Msa1349500:intron 25.0%
! AATGTTGCATAAAAAAAACC+GGG - tig0010965:14765-14784 Msa1349500:intron 25.0%
! CAATAAAAACGACAGTTAAA+AGG + tig0010965:14851-14870 None:intergenic 25.0%
!!! GTAAATATTTTTCAAAGTGC+CGG - tig0010965:14990-15009 Msa1349500:intron 25.0%
! ATTGGATTGCAATAGAAATT+TGG - tig0010965:15025-15044 Msa1349500:intron 25.0%
! AGGAAAATATGAAGGAATTA+TGG - tig0010965:15138-15157 Msa1349500:intron 25.0%
! ATTATAAAATATGGAATGGG+GGG + tig0010965:15495-15514 None:intergenic 25.0%
! GATTATAAAATATGGAATGG+GGG + tig0010965:15496-15515 None:intergenic 25.0%
!! TGATTTTCAACTAAACTTTC+TGG + tig0010965:15620-15639 None:intergenic 25.0%
! AAACTTAATAGAACCATCAT+GGG - tig0010965:15651-15670 Msa1349500:CDS 25.0%
!!! TTTGATCTTGTTATTTGTCA+TGG - tig0010965:15695-15714 Msa1349500:intron 25.0%
!!! TTGATCTTGTTATTTGTCAT+GGG - tig0010965:15696-15715 Msa1349500:intron 25.0%
! AATGAATTCATCATCCATTA+TGG + tig0010965:15742-15761 None:intergenic 25.0%
! ATATGAAAGTGAGATTTCTT+CGG - tig0010965:6289-6308 Msa1349500:CDS 25.0%
!! AAATATTAGCTCTTGATCAA+TGG + tig0010965:16664-16683 None:intergenic 25.0%
! ATGAAAAGGATGAACTATTA+TGG - tig0010965:16998-17017 Msa1349500:CDS 25.0%
! TGAAAAGGATGAACTATTAT+GGG - tig0010965:16999-17018 Msa1349500:CDS 25.0%
! TTTGGCTATATGGTAATTAA+TGG + tig0010965:17185-17204 None:intergenic 25.0%
!! TTTTCTTTCTTCTTTTCTCA+AGG - tig0010965:17266-17285 Msa1349500:intron 25.0%
!! TTGTATTGGTCATTAGAATT+TGG + tig0010965:17974-17993 None:intergenic 25.0%
ACCATTATTCTTACTACTCA+TGG + tig0010965:5280-5299 None:intergenic 30.0%
TAATGGTCTATTAGCCATAA+TGG - tig0010965:5293-5312 Msa1349500:CDS 30.0%
!!! AAAGCCATCTTGTTTTTTGA+AGG - tig0010965:5375-5394 Msa1349500:CDS 30.0%
TTGTCCTTCAAAAAACAAGA+TGG + tig0010965:5382-5401 None:intergenic 30.0%
TCAAGAAATCTATCAAAAGG+GGG - tig0010965:5708-5727 Msa1349500:CDS 30.0%
TCTATAGTTACACATATGAG+TGG + tig0010965:5842-5861 None:intergenic 30.0%
TTGAATGTTATTGCATGAGA+GGG - tig0010965:6029-6048 Msa1349500:CDS 30.0%
TAATACACATGATCAGTCAT+AGG + tig0010965:6157-6176 None:intergenic 30.0%
GTGTATTATATATCTTTGGC+AGG - tig0010965:6169-6188 Msa1349500:intron 30.0%
!! ACATGTTCATAAGCTGTTTT+CGG + tig0010965:6499-6518 None:intergenic 30.0%
! GAGAGACTGTTAATAACTTT+TGG + tig0010965:6536-6555 None:intergenic 30.0%
CATGATATATAGGGTAAGTT+TGG + tig0010965:6596-6615 None:intergenic 30.0%
AATATTTAACCTGCAACACA+AGG + tig0010965:6666-6685 None:intergenic 30.0%
TGTGTTGCAGGTTAAATATT+TGG - tig0010965:6666-6685 Msa1349500:intron 30.0%
TAAGAATTGTTGTGATTGCT+AGG - tig0010965:6700-6719 Msa1349500:intron 30.0%
! TCAATCTTGTAAAGTGTTCT+TGG + tig0010965:6782-6801 None:intergenic 30.0%
! TTTTTGAATTGTGTACCGAA+AGG - tig0010965:7167-7186 Msa1349500:CDS 30.0%
AGTTCAAACATTACTAACAC+AGG - tig0010965:7320-7339 Msa1349500:intron 30.0%
! TTTTACTAGGAATTCTATGG+TGG - tig0010965:7453-7472 Msa1349500:intron 30.0%
TTTACTAGGAATTCTATGGT+GGG - tig0010965:7454-7473 Msa1349500:intron 30.0%
! AAATACCTGTGATTTTGCAA+AGG + tig0010965:7828-7847 None:intergenic 30.0%
ATTGAATGCGTACATAACAT+AGG - tig0010965:7921-7940 Msa1349500:intron 30.0%
TCCTAATCCTAATATTCATG+TGG - tig0010965:8113-8132 Msa1349500:intron 30.0%
CCTAATCCTAATATTCATGT+GGG - tig0010965:8114-8133 Msa1349500:intron 30.0%
CAGATCTTGCATCATTAAAT+TGG + tig0010965:8170-8189 None:intergenic 30.0%
TTGATTGCCGAAATTAAAAC+CGG - tig0010965:8252-8271 Msa1349500:intron 30.0%
TTTGAAAAACTACATAGTCC+CGG + tig0010965:8274-8293 None:intergenic 30.0%
! CACATGACATTTTCTTAACA+TGG + tig0010965:8354-8373 None:intergenic 30.0%
TGATACTTGATAGAGGAAAA+CGG + tig0010965:8708-8727 None:intergenic 30.0%
CTAACATAAAACTCAACCAT+GGG - tig0010965:8748-8767 Msa1349500:intron 30.0%
TTGAAAAATGAGTACAAGGA+AGG - tig0010965:8971-8990 Msa1349500:intron 30.0%
TGAAAAATGAGTACAAGGAA+GGG - tig0010965:8972-8991 Msa1349500:intron 30.0%
AGACAAGTAAAGACAAAGAA+AGG - tig0010965:9039-9058 Msa1349500:intron 30.0%
CTTATGTTAACCCTCTATTA+TGG + tig0010965:9087-9106 None:intergenic 30.0%
CTCCACAACTAAAAATAACA+AGG - tig0010965:9163-9182 Msa1349500:CDS 30.0%
GGATCTTTCTCATAATGTAA+AGG - tig0010965:9193-9212 Msa1349500:intron 30.0%
CTTTCTCATAATGTAAAGGA+AGG - tig0010965:9197-9216 Msa1349500:intron 30.0%
! TTAATGCACTATCCTTTTCA+AGG - tig0010965:9312-9331 Msa1349500:intron 30.0%
AAAACCTAATAATGTTGGGT+GGG + tig0010965:9368-9387 None:intergenic 30.0%
TCTATCAAATCGCATATATC+AGG + tig0010965:9418-9437 None:intergenic 30.0%
CAAACTTAAAACGATAGTGT+TGG + tig0010965:9445-9464 None:intergenic 30.0%
TCTCTCTGCAATAAATAAGT+AGG - tig0010965:9570-9589 Msa1349500:intron 30.0%
CTCTCTGCAATAAATAAGTA+GGG - tig0010965:9571-9590 Msa1349500:intron 30.0%
AATCAATTCTTATGCGCAAT+GGG + tig0010965:9732-9751 None:intergenic 30.0%
AAATCAATTCTTATGCGCAA+TGG + tig0010965:9733-9752 None:intergenic 30.0%
CACATGTCAATTCAAATAAG+TGG + tig0010965:9768-9787 None:intergenic 30.0%
ATTTGAATTGACATGTGAAG+CGG - tig0010965:9771-9790 Msa1349500:intron 30.0%
GTGTAGGATATCTAAGAAAA+AGG - tig0010965:9957-9976 Msa1349500:intron 30.0%
TTGGCAAGAAAAACAAAACA+TGG + tig0010965:10044-10063 None:intergenic 30.0%
TTCATATGTATGTGTGAAAC+AGG + tig0010965:10547-10566 None:intergenic 30.0%
GAAAAGACCAAATGTAGTAA+CGG - tig0010965:10705-10724 Msa1349500:intron 30.0%
!! CTATTTACTTAGTATCGGTT+TGG + tig0010965:10807-10826 None:intergenic 30.0%
!!! ATTTTGATTGCAGTGTGATT+TGG + tig0010965:11041-11060 None:intergenic 30.0%
TTAGAGAGAGTGAAATGAAA+TGG + tig0010965:11073-11092 None:intergenic 30.0%
TTTCATTTCACTCTCTCTAA+TGG - tig0010965:11073-11092 Msa1349500:CDS 30.0%
AATTTCATTTCGATTCATGC+AGG - tig0010965:11246-11265 Msa1349500:intron 30.0%
! TTGACGCATTCAATATTTTG+AGG + tig0010965:11306-11325 None:intergenic 30.0%
! ATTCACTGTTCTAGGTTAAT+AGG - tig0010965:11484-11503 Msa1349500:intron 30.0%
! CTAGGTTAATAGGTTCTAAT+CGG - tig0010965:11494-11513 Msa1349500:intron 30.0%
! TTAATAGGTTCTAATCGGTT+TGG - tig0010965:11499-11518 Msa1349500:intron 30.0%
! TATCCAATTTTCTGTCTCAT+TGG + tig0010965:11723-11742 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTTTCA+TGG - tig0010965:11865-11884 Msa1349500:intron 30.0%
ATAATTCAATCCAAACACAC+TGG - tig0010965:11995-12014 Msa1349500:CDS 30.0%
! ATTCACCATTTTAGACTTTG+AGG - tig0010965:12067-12086 Msa1349500:intron 30.0%
! GTTTTTATTACCCCTAACAA+AGG + tig0010965:12356-12375 None:intergenic 30.0%
! TCTAGGATATTGAAATCTCT+TGG - tig0010965:12799-12818 Msa1349500:intron 30.0%
CTAGGATATTGAAATCTCTT+GGG - tig0010965:12800-12819 Msa1349500:intron 30.0%
CACTTATATGATAAACGCTT+AGG - tig0010965:13046-13065 Msa1349500:intron 30.0%
! AATTTTTCATGTCTAGGAAC+CGG - tig0010965:13209-13228 Msa1349500:intron 30.0%
TGCACGTTACATTATAATTG+TGG - tig0010965:13326-13345 Msa1349500:intron 30.0%
! TGTTTGAAGTGATATTTCAG+TGG - tig0010965:13361-13380 Msa1349500:intron 30.0%
TTTCTTTGTTAGGCAAAATG+TGG + tig0010965:13416-13435 None:intergenic 30.0%
ATACTATGCACCTTCAAATT+TGG - tig0010965:13958-13977 Msa1349500:intron 30.0%
! AAATTTGGAAGTGTAGGAAT+GGG - tig0010965:13973-13992 Msa1349500:intron 30.0%
TTGAATGAAACTTAACCTTG+AGG - tig0010965:14102-14121 Msa1349500:intron 30.0%
AATGGAACAAAAGATTGATC+AGG + tig0010965:14201-14220 None:intergenic 30.0%
! TTTTGTTCCATTGAAGACAA+AGG - tig0010965:14209-14228 Msa1349500:intron 30.0%
CAACAGATATTAAGCCAAAA+TGG + tig0010965:14347-14366 None:intergenic 30.0%
!!! CATTTTGGCTTAATATCTGT+TGG - tig0010965:14345-14364 Msa1349500:intron 30.0%
! CATATGATTCTTTTATGGAC+TGG + tig0010965:14491-14510 None:intergenic 30.0%
TTCTTAACAGGAGAATTACA+AGG - tig0010965:14577-14596 Msa1349500:intron 30.0%
!!! CGGTTTTTTTTATGCAACAT+TGG + tig0010965:14766-14785 None:intergenic 30.0%
AAGTCATAGTAAATGAGTCA+TGG + tig0010965:15445-15464 None:intergenic 30.0%
TAACTACCATTACCTCAAAT+AGG + tig0010965:15555-15574 None:intergenic 30.0%
! TATTTGAGGTAATGGTAGTT+AGG - tig0010965:15554-15573 Msa1349500:CDS 30.0%
GAAACTTAATAGAACCATCA+TGG - tig0010965:15650-15669 Msa1349500:CDS 30.0%
AACTTAATAGAACCATCATG+GGG - tig0010965:15652-15671 Msa1349500:intron 30.0%
! TGTTATTTGTCATGGGTAAA+TGG - tig0010965:15703-15722 Msa1349500:intron 30.0%
!! GAATGGATTATTAGCCATAA+TGG - tig0010965:15725-15744 Msa1349500:intron 30.0%
!!! AAAGCCATCATGTTTTTTGA+AGG - tig0010965:15807-15826 Msa1349500:CDS 30.0%
TTGTCCTTCAAAAAACATGA+TGG + tig0010965:15814-15833 None:intergenic 30.0%
! TTTAACCACAATTTTGCACT+AGG - tig0010965:15942-15961 Msa1349500:intron 30.0%
ATGTGTATTGTATGTGTCAT+TGG - tig0010965:16032-16051 Msa1349500:CDS 30.0%
AAACGCAGATCATAATTGTT+GGG - tig0010965:16405-16424 Msa1349500:intron 30.0%
TCAATCTTGTAAGTTGTTCT+TGG + tig0010965:16454-16473 None:intergenic 30.0%
!! AATTGCTTACAGATTTTGAC+TGG + tig0010965:16585-16604 None:intergenic 30.0%
CAAAATCTGTAAGCAATTCA+AGG - tig0010965:16587-16606 Msa1349500:CDS 30.0%
CATGAATCATGATGATCAAT+TGG - tig0010965:16629-16648 Msa1349500:intron 30.0%
! GATTTTGCTGACAAATATAG+AGG - tig0010965:16831-16850 Msa1349500:intron 30.0%
CAAATATAGAGGTTCTTACT+CGG - tig0010965:16842-16861 Msa1349500:intron 30.0%
AAATATAGAGGTTCTTACTC+GGG - tig0010965:16843-16862 Msa1349500:intron 30.0%
AAGAATACAGTTTGGCTATA+TGG + tig0010965:17195-17214 None:intergenic 30.0%
! TCTTTTCTCAAGGAATTCTA+TGG - tig0010965:17276-17295 Msa1349500:intron 30.0%
GCAATCATTACATATATACC+TGG + tig0010965:17396-17415 None:intergenic 30.0%
TTCAATCAACGTACATATGA+TGG - tig0010965:17454-17473 Msa1349500:intron 30.0%
!!! TATTTTGTTGTTAACTCAGG+TGG - tig0010965:17497-17516 Msa1349500:intron 30.0%
!!! ATTTTGTTGTTAACTCAGGT+GGG - tig0010965:17498-17517 Msa1349500:intron 30.0%
! ATATACCTGTGATTTTGCAA+AGG + tig0010965:17669-17688 None:intergenic 30.0%
CACAGGTATATATACTAATC+TGG - tig0010965:17678-17697 Msa1349500:intron 30.0%
ACTTGAATGTGACATTACAT+AGG - tig0010965:17742-17761 Msa1349500:intron 30.0%
TAGATGAAGAGAAATAGTTC+TGG + tig0010965:17910-17929 None:intergenic 30.0%
TCCAAATCCTAATATTCATG+TGG - tig0010965:17931-17950 Msa1349500:CDS 30.0%
CCAAATCCTAATATTCATGT+GGG - tig0010965:17932-17951 Msa1349500:CDS 30.0%
AACAAAAGCAGCATTCATAT+AGG + tig0010965:18035-18054 None:intergenic 30.0%
!!! TATATGAATGCTGCTTTTGT+TGG - tig0010965:18034-18053 Msa1349500:CDS 30.0%
TCAAGAAAATTGAAGAGTCT+CGG + tig0010965:18092-18111 None:intergenic 30.0%
! GGGTTCTATTTGTTGATAAG+TGG - tig0010965:5237-5256 Msa1349500:CDS 35.0%
TGATAAGTGGTTTGATCTTG+TGG - tig0010965:5250-5269 Msa1349500:CDS 35.0%
GCCATGAGTAGTAAGAATAA+TGG - tig0010965:5276-5295 Msa1349500:CDS 35.0%
!! TCTATTAGCCATAATGGATG+AGG - tig0010965:5299-5318 Msa1349500:CDS 35.0%
TGCATAGTTGTAACTAGATG+AGG + tig0010965:5343-5362 None:intergenic 35.0%
! GTTACACATATGAGTGGTTT+TGG + tig0010965:5836-5855 None:intergenic 35.0%
CTTGAATGTTATTGCATGAG+AGG - tig0010965:6028-6047 Msa1349500:CDS 35.0%
! GTGATAATGTGAAGTTTGGA+TGG - tig0010965:6222-6241 Msa1349500:CDS 35.0%
AAGCTGACTGTAAATGACAT+TGG + tig0010965:6248-6267 None:intergenic 35.0%
TTACAGTCAGCTTATTGAGT+TGG - tig0010965:6255-6274 Msa1349500:CDS 35.0%
TACAGTCAGCTTATTGAGTT+GGG - tig0010965:6256-6275 Msa1349500:CDS 35.0%
!! GCTATTTTCACAAGCTATCT+TGG - tig0010965:6455-6474 Msa1349500:CDS 35.0%
AATTGTTGTGATTGCTAGGT+TGG - tig0010965:6704-6723 Msa1349500:intron 35.0%
AAACGCAGATCATCAATGTT+GGG - tig0010965:6733-6752 Msa1349500:intron 35.0%
! GATTTTGCTGACAAGTATAG+AGG - tig0010965:7012-7031 Msa1349500:intron 35.0%
ACAAGCTGCAATTTCTTACT+TGG + tig0010965:7083-7102 None:intergenic 35.0%
AAGTAAGAAATTGCAGCTTG+TGG - tig0010965:7082-7101 Msa1349500:CDS 35.0%
AAGTACATCACAGATAACCA+AGG - tig0010965:7249-7268 Msa1349500:CDS 35.0%
TTAGCCAAGATTCATAGTGA+TGG - tig0010965:7486-7505 Msa1349500:intron 35.0%
TTCACCATCACTATGAATCT+TGG + tig0010965:7493-7512 None:intergenic 35.0%
! TTTATATGTGCATTGATGCC+AGG - tig0010965:7516-7535 Msa1349500:intron 35.0%
TGCTATATTGTTAACTCAGG+TGG - tig0010965:7656-7675 Msa1349500:intron 35.0%
AATGAATAGTACCATGGTTG+AGG + tig0010965:7726-7745 None:intergenic 35.0%
GGAGAAAATGAATAGTACCA+TGG + tig0010965:7732-7751 None:intergenic 35.0%
CATATTGATGGAATCCATTG+TGG - tig0010965:7770-7789 Msa1349500:intron 35.0%
GATTTCAGAGGATGTGAAAT+TGG + tig0010965:7801-7820 None:intergenic 35.0%
ACCATGTATGACATCTTCAT+GGG + tig0010965:7970-7989 None:intergenic 35.0%
ATGAAGATGTCATACATGGT+GGG - tig0010965:7970-7989 Msa1349500:intron 35.0%
GTGAACTTTGATTGAAGGAA+TGG + tig0010965:8040-8059 None:intergenic 35.0%
CCCACATGAATATTAGGATT+AGG + tig0010965:8117-8136 None:intergenic 35.0%
ATAGCACCCACATGAATATT+AGG + tig0010965:8123-8142 None:intergenic 35.0%
TATATGAATGCTGCGTTCAT+AGG - tig0010965:8216-8235 Msa1349500:intron 35.0%
TGATTGCCGAAATTAAAACC+GGG - tig0010965:8253-8272 Msa1349500:intron 35.0%
!!! CATAGTCCCGGTTTTAATTT+CGG + tig0010965:8262-8281 None:intergenic 35.0%
! TTTCAAAGTTGATTGTGCGA+AGG - tig0010965:8287-8306 Msa1349500:intron 35.0%
AAGCTCATGATACTTGATAG+AGG + tig0010965:8715-8734 None:intergenic 35.0%
!! CCATGGTTGAGTTTTATGTT+AGG + tig0010965:8750-8769 None:intergenic 35.0%
CCTAACATAAAACTCAACCA+TGG - tig0010965:8747-8766 Msa1349500:intron 35.0%
AGTTAGAATAAACTGTCCCA+TGG + tig0010965:8767-8786 None:intergenic 35.0%
TAATTAGAGCCTAATTGGCT+TGG + tig0010965:8857-8876 None:intergenic 35.0%
! AGCCAATTAGGCTCTAATTA+AGG - tig0010965:8857-8876 Msa1349500:intron 35.0%
CTCCTTAATTAGAGCCTAAT+TGG + tig0010965:8862-8881 None:intergenic 35.0%
ATTTCTTTGTAGCTTACGAG+TGG + tig0010965:9233-9252 None:intergenic 35.0%
CAAAACCTAATAATGTTGGG+TGG + tig0010965:9369-9388 None:intergenic 35.0%
AAAATAACTAAGGGAGTAGG+TGG - tig0010965:9687-9706 Msa1349500:intron 35.0%
ATCAATTCTTATGCGCAATG+GGG + tig0010965:9731-9750 None:intergenic 35.0%
TGCATTCGCTTATTATTGTG+CGG + tig0010965:10002-10021 None:intergenic 35.0%
AGTAACTGTGAGAAACTTAG+AGG + tig0010965:10456-10475 None:intergenic 35.0%
ATATGTATGTGTGAAACAGG+AGG + tig0010965:10544-10563 None:intergenic 35.0%
TTTCTCACCGTTACTACATT+TGG + tig0010965:10715-10734 None:intergenic 35.0%
AGTAACGGTGAGAAAGTTAA+AGG - tig0010965:10720-10739 Msa1349500:intron 35.0%
! TATAACTGCATGTCGATTAG+CGG + tig0010965:10980-10999 None:intergenic 35.0%
TTTGATATTACCTGAGAAGG+AGG + tig0010965:11164-11183 None:intergenic 35.0%
GTGTTTGATATTACCTGAGA+AGG + tig0010965:11167-11186 None:intergenic 35.0%
GGAAATAATGAGAATACCAG+AGG + tig0010965:11349-11368 None:intergenic 35.0%
GAGAGTAATAAGCTACAATC+AGG + tig0010965:11616-11635 None:intergenic 35.0%
CGAAAAACTGAACAGATTCA+TGG - tig0010965:11635-11654 Msa1349500:intron 35.0%
TCTCCAATGAGACAGAAAAT+TGG - tig0010965:11717-11736 Msa1349500:intron 35.0%
AATTATGCGAGCTTATCTAC+TGG + tig0010965:11981-12000 None:intergenic 35.0%
AGGAGTAATAAGCTACAATC+AGG + tig0010965:12202-12221 None:intergenic 35.0%
CATATGATAATTCGGTCAAC+AGG + tig0010965:12276-12295 None:intergenic 35.0%
TCTCTGATTCCATATCTACA+AGG - tig0010965:12302-12321 Msa1349500:intron 35.0%
CATAAGAGACCTTGTAGATA+TGG + tig0010965:12314-12333 None:intergenic 35.0%
GAAATTTCTCACATGTAGTG+TGG - tig0010965:12436-12455 Msa1349500:intron 35.0%
!! TATTGACGTCCTTTTGAGAA+GGG + tig0010965:12560-12579 None:intergenic 35.0%
! TTTTGTGAAGCCTTCATTCT+AGG - tig0010965:12782-12801 Msa1349500:intron 35.0%
TGTCATAAGCTACTTCCATA+AGG + tig0010965:12891-12910 None:intergenic 35.0%
! GCTTCCAATTTTTCATGTCT+AGG - tig0010965:13203-13222 Msa1349500:intron 35.0%
GGTTCCTAGACATGAAAAAT+TGG + tig0010965:13210-13229 None:intergenic 35.0%
! ATTTTTCATGTCTAGGAACC+GGG - tig0010965:13210-13229 Msa1349500:intron 35.0%
TGCATGCTAAACATAAGCAA+AGG + tig0010965:13454-13473 None:intergenic 35.0%
TTAGCTGTGATAAGAATGCT+TGG + tig0010965:13519-13538 None:intergenic 35.0%
AGCATTCTTATCACAGCTAA+AGG - tig0010965:13519-13538 Msa1349500:intron 35.0%
AAAGCTAAAATTGGCAAGTC+TGG + tig0010965:13767-13786 None:intergenic 35.0%
!!! AGACTTGCCAATTTTAGCTT+TGG - tig0010965:13766-13785 Msa1349500:intron 35.0%
CAATCCACCAAAGCTAAAAT+TGG + tig0010965:13776-13795 None:intergenic 35.0%
!!! CAATTTTAGCTTTGGTGGAT+TGG - tig0010965:13774-13793 Msa1349500:intron 35.0%
! ACCTTCAAATTTGGAAGTGT+AGG - tig0010965:13967-13986 Msa1349500:intron 35.0%
TCCTACACTTCCAAATTTGA+AGG + tig0010965:13971-13990 None:intergenic 35.0%
! CAAATTTGGAAGTGTAGGAA+TGG - tig0010965:13972-13991 Msa1349500:intron 35.0%
! TCTCACAAGCTCTAATATGT+TGG - tig0010965:14056-14075 Msa1349500:intron 35.0%
!! TCAAGCTTTGAGCAATTTGT+AGG + tig0010965:14236-14255 None:intergenic 35.0%
!!! AGAGGTTTTGAATGGTTTAC+CGG + tig0010965:14276-14295 None:intergenic 35.0%
CTCATGTAGAATCTAGCATA+AGG + tig0010965:14384-14403 None:intergenic 35.0%
ATTGAAGCCCTATACTTTCA+TGG - tig0010965:14641-14660 Msa1349500:intron 35.0%
CGGGTCAAAAACACATATTA+AGG - tig0010965:14799-14818 Msa1349500:intron 35.0%
ATCCAATAGTTGTGATCAAC+CGG + tig0010965:15012-15031 None:intergenic 35.0%
TTGCACTGAGGAAAATATGA+AGG - tig0010965:15130-15149 Msa1349500:intron 35.0%
!! ATTGTTTTACGTGCTAGTGA+TGG + tig0010965:15349-15368 None:intergenic 35.0%
TAGTAAATGAGTCATGGAGA+TGG + tig0010965:15439-15458 None:intergenic 35.0%
GTACATTCCTATCCTATTTG+AGG - tig0010965:15540-15559 Msa1349500:CDS 35.0%
! TCCTATCCTATTTGAGGTAA+TGG - tig0010965:15546-15565 Msa1349500:CDS 35.0%
ACCATTACCTCAAATAGGAT+AGG + tig0010965:15550-15569 None:intergenic 35.0%
AATGGTAGTTAGGCATAGTT+AGG - tig0010965:15564-15583 Msa1349500:CDS 35.0%
TTTGTCATGGGTAAATGGAA+TGG - tig0010965:15708-15727 Msa1349500:intron 35.0%
TGCATAGTCATAATTAGCTG+AGG + tig0010965:15775-15794 None:intergenic 35.0%
! GTGATAATGTGAAGTTTGGT+TGG - tig0010965:16089-16108 Msa1349500:CDS 35.0%
CAAATATCGTTGTGATTGCT+AGG - tig0010965:16372-16391 Msa1349500:intron 35.0%
GAAACGCAGATCATAATTGT+TGG - tig0010965:16404-16423 Msa1349500:intron 35.0%
!!! TTTTGACTGGCTTAATAGCT+TGG + tig0010965:16572-16591 None:intergenic 35.0%
AGCTGGGATAACAAATTTGT+TGG - tig0010965:17114-17133 Msa1349500:CDS 35.0%
AGCTCAAACATTACTAACAC+AGG - tig0010965:17137-17156 Msa1349500:intron 35.0%
TTTCTCAAGGAATTCTATGG+CGG - tig0010965:17279-17298 Msa1349500:intron 35.0%
TTAGCCAAGATTAAGACTGA+TGG - tig0010965:17312-17331 Msa1349500:intron 35.0%
TTCACCATCAGTCTTAATCT+TGG + tig0010965:17319-17338 None:intergenic 35.0%
! TTTATATGTGCATTGATGCC+AGG - tig0010965:7516-7535 Msa1349500:intron 35.0%
CATATTGATGGAATTCAGTG+TGG - tig0010965:17611-17630 Msa1349500:intron 35.0%
TGAATGTGACATTACATAGG+TGG - tig0010965:17745-17764 Msa1349500:intron 35.0%
!! ACATAGGTGGACTACATATT+AGG - tig0010965:17758-17777 Msa1349500:intron 35.0%
ACCATGTATGACATCTTCAT+GGG + tig0010965:7970-7989 None:intergenic 35.0%
ATGAAGATGTCATACATGGT+GGG - tig0010965:7970-7989 Msa1349500:intron 35.0%
! CCTCTGTGATGTAATTGTTT+TGG + tig0010965:17833-17852 None:intergenic 35.0%
CCAAAACAATTACATCACAG+AGG - tig0010965:17830-17849 Msa1349500:intron 35.0%
TTGAGATATGATTGAAGGGA+TGG + tig0010965:17861-17880 None:intergenic 35.0%
! CAGGTTGAGATATGATTGAA+GGG + tig0010965:17865-17884 None:intergenic 35.0%
CCCACATGAATATTAGGATT+TGG + tig0010965:8117-8136 None:intergenic 35.0%
ATAGCACCCACATGAATATT+AGG + tig0010965:8123-8142 None:intergenic 35.0%
CAGATCTTGCATCATTGTAT+TGG + tig0010965:17988-18007 None:intergenic 35.0%
AAAAGCAGCATTCATATAGG+TGG + tig0010965:18032-18051 None:intergenic 35.0%
TACAACTATGCAGATGCTCT+TGG - tig0010965:5351-5370 Msa1349500:CDS 40.0%
!!! TTTTTTGAAGGACAACGCTC+AGG - tig0010965:5387-5406 Msa1349500:CDS 40.0%
!! TTTTTGAAGGACAACGCTCA+GGG - tig0010965:5388-5407 Msa1349500:CDS 40.0%
! CACTTCACTCTTTGGTCTTT+AGG + tig0010965:5420-5439 None:intergenic 40.0%
CTAAAGACCAAAGAGTGAAG+TGG - tig0010965:5418-5437 Msa1349500:CDS 40.0%
AATGTTATTGCATGAGAGGG+AGG - tig0010965:6032-6051 Msa1349500:CDS 40.0%
AATCATGGCAGATTGAGAGA+GGG + tig0010965:6076-6095 None:intergenic 40.0%
TAATCATGGCAGATTGAGAG+AGG + tig0010965:6077-6096 None:intergenic 40.0%
ATATCTTTGGCAGGTGAATC+TGG - tig0010965:6178-6197 Msa1349500:intron 40.0%
! GCTGGTGATAATGTGAAGTT+TGG - tig0010965:6218-6237 Msa1349500:CDS 40.0%
! TTCACACAGGCATGTTTCTA+TGG - tig0010965:6395-6414 Msa1349500:intron 40.0%
! CATGTTTCTATGGCCCTTTA+CGG - tig0010965:6405-6424 Msa1349500:intron 40.0%
GAAACGCAGATCATCAATGT+TGG - tig0010965:6732-6751 Msa1349500:intron 40.0%
AAGATTGATGCTAATTCCCC+TGG - tig0010965:6794-6813 Msa1349500:CDS 40.0%
ACCGAAAGGATGAACTGTTA+TGG - tig0010965:7181-7200 Msa1349500:CDS 40.0%
CCCATAACAGTTCATCCTTT+CGG + tig0010965:7185-7204 None:intergenic 40.0%
CCGAAAGGATGAACTGTTAT+GGG - tig0010965:7182-7201 Msa1349500:CDS 40.0%
ACATCACAGATAACCAAGGT+TGG - tig0010965:7253-7272 Msa1349500:CDS 40.0%
AGATAACCAAGGTTGGAATC+AGG - tig0010965:7260-7279 Msa1349500:CDS 40.0%
AGCTGGGACAACAAATTTGT+TGG - tig0010965:7297-7316 Msa1349500:intron 40.0%
ATCTGTAGAGAGTAACTTCC+TGG + tig0010965:7537-7556 None:intergenic 40.0%
CTACAGATCAAAACAACTCC+TGG - tig0010965:7549-7568 Msa1349500:intron 40.0%
TGAAATTGGTAGAGCCACAA+TGG + tig0010965:7787-7806 None:intergenic 40.0%
GAATGCGTACATAACATAGG+TGG - tig0010965:7924-7943 Msa1349500:intron 40.0%
!! ACATAGGTGGACTACATACT+AGG - tig0010965:7937-7956 Msa1349500:intron 40.0%
TCCCATGAAGATGTCATACA+TGG - tig0010965:7966-7985 Msa1349500:intron 40.0%
CACCATGTATGACATCTTCA+TGG + tig0010965:7971-7990 None:intergenic 40.0%
CATGAAGATGTCATACATGG+TGG - tig0010965:7969-7988 Msa1349500:intron 40.0%
! ATGTCATACATGGTGGGATA+TGG - tig0010965:7976-7995 Msa1349500:intron 40.0%
CCTCTGTGATGTAATTGCTT+TGG + tig0010965:8012-8031 None:intergenic 40.0%
CCAAAGCAATTACATCACAG+AGG - tig0010965:8009-8028 Msa1349500:intron 40.0%
CATTGCAATCCACTTTAGCT+GGG + tig0010965:8062-8081 None:intergenic 40.0%
TCATTGCAATCCACTTTAGC+TGG + tig0010965:8063-8082 None:intergenic 40.0%
!! GCTAAAGTGGATTGCAATGA+TGG - tig0010965:8063-8082 Msa1349500:intron 40.0%
!! ATTCATGTGGGTGCTATTGT+TGG - tig0010965:8126-8145 Msa1349500:intron 40.0%
GCAGCATTCATATAAGTGGT+AGG + tig0010965:8210-8229 None:intergenic 40.0%
GAACGCAGCATTCATATAAG+TGG + tig0010965:8214-8233 None:intergenic 40.0%
! TTGGTCTGTTTGGCTCAATT+GGG + tig0010965:8838-8857 None:intergenic 40.0%
TAAAACACAGGTCTATCTGC+TGG - tig0010965:8894-8913 Msa1349500:intron 40.0%
AGTCCAACAACCCATAATAG+AGG - tig0010965:9073-9092 Msa1349500:CDS 40.0%
GTCCAACAACCCATAATAGA+GGG - tig0010965:9074-9093 Msa1349500:CDS 40.0%
! AACCCTCTATTATGGGTTGT+TGG + tig0010965:9079-9098 None:intergenic 40.0%
! GTATCGTGTTGGTATGATTG+CGG + tig0010965:9144-9163 None:intergenic 40.0%
!! TTAGTTGTGGAGTATCGTGT+TGG + tig0010965:9155-9174 None:intergenic 40.0%
TTCTCCCACCCAACATTATT+AGG - tig0010965:9361-9380 Msa1349500:CDS 40.0%
GTCAAATCAAGTGTTCGTGT+AGG - tig0010965:9941-9960 Msa1349500:intron 40.0%
CTTAAGATCGAGATATGCTG+CGG - tig0010965:10075-10094 Msa1349500:CDS 40.0%
TTGAACCGTCCAATCACAAT+TGG + tig0010965:10140-10159 None:intergenic 40.0%
ACGTTAGGGTTTGTGTTATG+TGG - tig0010965:10510-10529 Msa1349500:intron 40.0%
CGTTAGGGTTTGTGTTATGT+GGG - tig0010965:10511-10530 Msa1349500:intron 40.0%
!! TGAAGAGTGTGATCGTTTTC+TGG + tig0010965:11008-11027 None:intergenic 40.0%
GAGGCAAATCTGATATAGCA+GGG + tig0010965:11330-11349 None:intergenic 40.0%
AGAGGCAAATCTGATATAGC+AGG + tig0010965:11331-11350 None:intergenic 40.0%
TGCTATATCAGATTTGCCTC+TGG - tig0010965:11330-11349 Msa1349500:intron 40.0%
ATAATCTGGTCAACAAGCCA+TGG + tig0010965:11685-11704 None:intergenic 40.0%
!!! CAATTGGCTTTTGCTGCATT+AGG + tig0010965:12033-12052 None:intergenic 40.0%
! ACAAAGGCTTTTGCTGCATT+AGG + tig0010965:12340-12359 None:intergenic 40.0%
ATGCAGCAAAAGCCTTTGTT+AGG - tig0010965:12341-12360 Msa1349500:intron 40.0%
TGCAGCAAAAGCCTTTGTTA+GGG - tig0010965:12342-12361 Msa1349500:intron 40.0%
TTTCTCACATGTAGTGTGGA+AGG - tig0010965:12440-12459 Msa1349500:intron 40.0%
GTGCTATCAGATATTGCTTC+AGG - tig0010965:12473-12492 Msa1349500:intron 40.0%
ACATCTGTTCCCTTCTCAAA+AGG - tig0010965:12548-12567 Msa1349500:intron 40.0%
!! CTATTGACGTCCTTTTGAGA+AGG + tig0010965:12561-12580 None:intergenic 40.0%
CTTCTCAAAAGGACGTCAAT+AGG - tig0010965:12559-12578 Msa1349500:intron 40.0%
CAGATACAGTCTTGGAATCA+TGG - tig0010965:12715-12734 Msa1349500:intron 40.0%
GAAATCTCTTGGGACATCTT+TGG - tig0010965:12810-12829 Msa1349500:intron 40.0%
TGTTCTGTATCACTGCTTGA+TGG - tig0010965:13140-13159 Msa1349500:intron 40.0%
TCTTCTGGACATGCAATTTC+TGG - tig0010965:13264-13283 Msa1349500:intron 40.0%
!! TTCAACGACTTGCTGAAGAT+AGG - tig0010965:13478-13497 Msa1349500:intron 40.0%
AGTACCTTGTGGCAATATCT+GGG + tig0010965:13548-13567 None:intergenic 40.0%
TCGCATTATTACCCTTCTGA+TGG - tig0010965:13675-13694 Msa1349500:intron 40.0%
CGCATTATTACCCTTCTGAT+GGG - tig0010965:13676-13695 Msa1349500:intron 40.0%
! CATTAAAGCACCCATCAGAA+GGG + tig0010965:13689-13708 None:intergenic 40.0%
! ACATTAAAGCACCCATCAGA+AGG + tig0010965:13690-13709 None:intergenic 40.0%
!!! CTTGCCAATTTTAGCTTTGG+TGG - tig0010965:13769-13788 Msa1349500:intron 40.0%
ATCATATACAGGAATCCAGC+TGG - tig0010965:13928-13947 Msa1349500:intron 40.0%
CATAGTATAGCTAATCCAGC+TGG + tig0010965:13946-13965 None:intergenic 40.0%
TACCGTATCTGTATGACTCT+AGG + tig0010965:13999-14018 None:intergenic 40.0%
! ATCTAGCTTGCAATGTCAAG+TGG - tig0010965:14142-14161 Msa1349500:intron 40.0%
ATGTCAAGTGGTTAGGACTA+CGG - tig0010965:14154-14173 Msa1349500:intron 40.0%
AAAGATTGATCAGGCAGCAT+GGG + tig0010965:14192-14211 None:intergenic 40.0%
AAAAGATTGATCAGGCAGCA+TGG + tig0010965:14193-14212 None:intergenic 40.0%
TGTAGGTCCTTTGTCTTCAA+TGG + tig0010965:14219-14238 None:intergenic 40.0%
!!! CTGCATTCAGAGGTTTTGAA+TGG + tig0010965:14284-14303 None:intergenic 40.0%
ACAGGAGAATTACAAGGAAG+AGG - tig0010965:14583-14602 Msa1349500:intron 40.0%
CTCAACTACTTATTGCACTG+AGG - tig0010965:15118-15137 Msa1349500:intron 40.0%
ATACACACATGTGACGTTCA+AGG - tig0010965:15369-15388 Msa1349500:intron 40.0%
TACACACATGTGACGTTCAA+GGG - tig0010965:15370-15389 Msa1349500:intron 40.0%
!!! TTTTTTGAAGGACAACGCTC+AGG - tig0010965:5387-5406 Msa1349500:CDS 40.0%
!! TTTTTGAAGGACAACGCTCA+GGG - tig0010965:5388-5407 Msa1349500:CDS 40.0%
TTGAGCCTAGTGCAAAATTG+TGG + tig0010965:15950-15969 None:intergenic 40.0%
! GTATTGTATGTGTCATTGGC+AGG - tig0010965:16036-16055 Msa1349500:CDS 40.0%
AAGCTCACCGTAAAAGACAT+CGG + tig0010965:16115-16134 None:intergenic 40.0%
ATATCGTTGTGATTGCTAGG+TGG - tig0010965:16375-16394 Msa1349500:intron 40.0%
TATCGTTGTGATTGCTAGGT+GGG - tig0010965:16376-16395 Msa1349500:intron 40.0%
!! AAGATTGATTCGAATTCCCC+TGG - tig0010965:16466-16485 Msa1349500:CDS 40.0%
AATTGAAGCAGCAGAAAGAG+CGG + tig0010965:16518-16537 None:intergenic 40.0%
CAGAGTACGAGCAGTAAAAT+GGG + tig0010965:16875-16894 None:intergenic 40.0%
! AACTATTATGGGCTGCTTCT+TGG - tig0010965:17010-17029 Msa1349500:CDS 40.0%
ACGTACATCACAAGTAACCA+AGG - tig0010965:17066-17085 Msa1349500:CDS 40.0%
ACATCACAAGTAACCAAGGT+TGG - tig0010965:17070-17089 Msa1349500:CDS 40.0%
TTCTCAAGGAATTCTATGGC+GGG - tig0010965:17280-17299 Msa1349500:intron 40.0%
CTACAGATTAGAACAACTCC+AGG - tig0010965:17375-17394 Msa1349500:intron 40.0%
GGGCTTCTGTATATTAGAGA+TGG - tig0010965:17518-17537 Msa1349500:intron 40.0%
ATATACCACAACCTCAACCA+TGG - tig0010965:17553-17572 Msa1349500:intron 40.0%
AATGAATAGCACCATGGTTG+AGG + tig0010965:17567-17586 None:intergenic 40.0%
GGAGAAAATGAATAGCACCA+TGG + tig0010965:17573-17592 None:intergenic 40.0%
AATTTCAGAGGGGGAGAAAT+GGG + tig0010965:17642-17661 None:intergenic 40.0%
TAATTTCAGAGGGGGAGAAA+TGG + tig0010965:17643-17662 None:intergenic 40.0%
! AAAGGCTCTAATTTCAGAGG+GGG + tig0010965:17651-17670 None:intergenic 40.0%
! CAAAGGCTCTAATTTCAGAG+GGG + tig0010965:17652-17671 None:intergenic 40.0%
! GCAAAGGCTCTAATTTCAGA+GGG + tig0010965:17653-17672 None:intergenic 40.0%
! TGCAAAGGCTCTAATTTCAG+AGG + tig0010965:17654-17673 None:intergenic 40.0%
TAGAGCCTTTGCAAAATCAC+AGG - tig0010965:17661-17680 Msa1349500:intron 40.0%
TCCCATGAAGATGTCATACA+TGG - tig0010965:7966-7985 Msa1349500:intron 40.0%
CACCATGTATGACATCTTCA+TGG + tig0010965:7971-7990 None:intergenic 40.0%
CATGAAGATGTCATACATGG+TGG - tig0010965:7969-7988 Msa1349500:intron 40.0%
! ATGTCATACATGGTGGGATA+TGG - tig0010965:7976-7995 Msa1349500:intron 40.0%
! TGTCATACATGGTGGGATAT+GGG - tig0010965:7977-7996 Msa1349500:intron 40.0%
! GCAGGTTGAGATATGATTGA+AGG + tig0010965:17866-17885 None:intergenic 40.0%
ATATCTCAACCTGCCAAAGT+GGG - tig0010965:17872-17891 Msa1349500:CDS 40.0%
!! ATTCATGTGGGTGCTATTGT+TGG - tig0010965:8126-8145 Msa1349500:intron 40.0%
AAGACCAAAGAGTGAAGTGG+AGG - tig0010965:5421-5440 Msa1349500:CDS 45.0%
AGACCAAAGAGTGAAGTGGA+GGG - tig0010965:5422-5441 Msa1349500:CDS 45.0%
ATCATGGCAGATTGAGAGAG+GGG + tig0010965:6075-6094 None:intergenic 45.0%
GTTGGAGGATACTATGATGC+TGG - tig0010965:6200-6219 Msa1349500:CDS 45.0%
TTGTACCCCAACGAATAGCA+CGG + tig0010965:6337-6356 None:intergenic 45.0%
GTACATATGCCTTGTGTTGC+AGG - tig0010965:6654-6673 Msa1349500:intron 45.0%
! TGTGATTGCTAGGTTGGAGA+AGG - tig0010965:6710-6729 Msa1349500:intron 45.0%
! CTTGGAGTATCCATGTCTTC+CGG + tig0010965:6764-6783 None:intergenic 45.0%
!! CAAGTATAGAGGCACCTACA+CGG - tig0010965:7023-7042 Msa1349500:intron 45.0%
!! AAGTATAGAGGCACCTACAC+GGG - tig0010965:7024-7043 Msa1349500:intron 45.0%
CAAGTACTTGCTTTCTCCAC+TGG + tig0010965:7229-7248 None:intergenic 45.0%
! GGAATTCTATGGTGGGAAGA+AGG - tig0010965:7461-7480 Msa1349500:intron 45.0%
ATACACCACAACCTCAACCA+TGG - tig0010965:7712-7731 Msa1349500:intron 45.0%
TAGTACCATGGTTGAGGTTG+TGG + tig0010965:7720-7739 None:intergenic 45.0%
! TGCAAAGGCTCTGATTTCAG+AGG + tig0010965:7813-7832 None:intergenic 45.0%
CAGAGCCTTTGCAAAATCAC+AGG - tig0010965:7820-7839 Msa1349500:intron 45.0%
GCTGGGTGAACTTTGATTGA+AGG + tig0010965:8045-8064 None:intergenic 45.0%
CAAAGTTCACCCAGCTAAAG+TGG - tig0010965:8050-8069 Msa1349500:intron 45.0%
AGTTGATTGTGCGAAGGCTA+AGG - tig0010965:8293-8312 Msa1349500:intron 45.0%
ACTTGATAGAGGAAAACGGC+CGG + tig0010965:8704-8723 None:intergenic 45.0%
! CTTGGTCTGTTTGGCTCAAT+TGG + tig0010965:8839-8858 None:intergenic 45.0%
!! CCTAATTGGCTTGGTCTGTT+TGG + tig0010965:8848-8867 None:intergenic 45.0%
CCAAACAGACCAAGCCAATT+AGG - tig0010965:8845-8864 Msa1349500:intron 45.0%
CATGACCGTCCAATTGTGAT+TGG - tig0010965:10128-10147 Msa1349500:intron 45.0%
ACCGTCCAATTGTGATTGGA+CGG - tig0010965:10132-10151 Msa1349500:intron 45.0%
ACCGTCCAATCACAATTGGA+CGG + tig0010965:10136-10155 None:intergenic 45.0%
GGCGTAACAAAGCTCTTGAT+CGG + tig0010965:11132-11151 None:intergenic 45.0%
CTGAGAAGGAGGAACGATAT+CGG + tig0010965:11153-11172 None:intergenic 45.0%
TAAGCGCTTGTGAGACTGTT+TGG + tig0010965:11956-11975 None:intergenic 45.0%
TCACAAGAGACCAGTGTGTT+TGG + tig0010965:12008-12027 None:intergenic 45.0%
CAATCAGGAATGTGCGTATG+TGG + tig0010965:12187-12206 None:intergenic 45.0%
AGCAACAGTCGAGTGAATCA+TGG - tig0010965:12250-12269 Msa1349500:intron 45.0%
GCAGCAAAAGCCTTTGTTAG+GGG - tig0010965:12343-12362 Msa1349500:intron 45.0%
ACATGTAGTGTGGAAGGTGA+TGG - tig0010965:12446-12465 Msa1349500:intron 45.0%
GACGTCAATAGGACAATCCA+AGG - tig0010965:12570-12589 Msa1349500:intron 45.0%
GCAACGCTACAAGATCTGTT+TGG + tig0010965:12685-12704 None:intergenic 45.0%
CAGATCTTGTAGCGTTGCTT+CGG - tig0010965:12687-12706 Msa1349500:intron 45.0%
GTTACCCAGATATTGCCACA+AGG - tig0010965:13541-13560 Msa1349500:intron 45.0%
GAGTACCTTGTGGCAATATC+TGG + tig0010965:13549-13568 None:intergenic 45.0%
!! TTAGCTTTGGTGGATTGGTG+CGG - tig0010965:13779-13798 Msa1349500:intron 45.0%
GGCCTAGAGTCATACAGATA+CGG - tig0010965:13994-14013 Msa1349500:intron 45.0%
GCTTGCAATGTCAAGTGGTT+AGG - tig0010965:14147-14166 Msa1349500:intron 45.0%
TGTCAAGTGGTTAGGACTAC+GGG - tig0010965:14155-14174 Msa1349500:intron 45.0%
GATGTCCTCGAGAATCTTAC+CGG - tig0010965:14254-14273 Msa1349500:intron 45.0%
GTTTACCGGTAAGATTCTCG+AGG + tig0010965:14262-14281 None:intergenic 45.0%
TTAGTAAGGGCTGCATTCAG+AGG + tig0010965:14294-14313 None:intergenic 45.0%
!! TTATGGACTGGTTCTTGTGC+AGG + tig0010965:14479-14498 None:intergenic 45.0%
! CAAGGAAGAGGTCACTTTGA+TGG - tig0010965:14595-14614 Msa1349500:intron 45.0%
! GTCACTTTGATGGTTGAGAG+CGG - tig0010965:14605-14624 Msa1349500:intron 45.0%
AAAACCGGGTCTTGCTAACA+CGG - tig0010965:14779-14798 Msa1349500:intron 45.0%
! TGCCGGTTGATCACAACTAT+TGG - tig0010965:15007-15026 Msa1349500:intron 45.0%
ACACACATGTGACGTTCAAG+GGG - tig0010965:15371-15390 Msa1349500:intron 45.0%
CACTTCACTCTTTGGTCCTT+AGG + tig0010965:15852-15871 None:intergenic 45.0%
CTAAGGACCAAAGAGTGAAG+TGG - tig0010965:15850-15869 Msa1349500:CDS 45.0%
! TTGTATGTGTCATTGGCAGG+TGG - tig0010965:16039-16058 Msa1349500:CDS 45.0%
! GCGGGTGATAATGTGAAGTT+TGG - tig0010965:16085-16104 Msa1349500:CDS 45.0%
!! TGGTTGGCCGATGTCTTTTA+CGG - tig0010965:16105-16124 Msa1349500:CDS 45.0%
!! TTACGGTGAGCTTGTTGAGT+TGG - tig0010965:16122-16141 Msa1349500:CDS 45.0%
CACTGCGAAGATAATCAAGC+TGG + tig0010965:16186-16205 None:intergenic 45.0%
! ATCTTCGCAGTGCTATTCGT+TGG - tig0010965:16194-16213 Msa1349500:intron 45.0%
! TCTTCGCAGTGCTATTCGTT+GGG - tig0010965:16195-16214 Msa1349500:intron 45.0%
! CTTGGTGTATCCATGTCTTC+TGG + tig0010965:16436-16455 None:intergenic 45.0%
CCAGAGTACGAGCAGTAAAA+TGG + tig0010965:16876-16895 None:intergenic 45.0%
! CCATTTTACTGCTCGTACTC+TGG - tig0010965:16873-16892 Msa1349500:intron 45.0%
TCTTGGCTATACAAGGCTAG+TGG - tig0010965:17027-17046 Msa1349500:CDS 45.0%
CTTGGCTATACAAGGCTAGT+GGG - tig0010965:17028-17047 Msa1349500:CDS 45.0%
TTGGCTATACAAGGCTAGTG+GGG - tig0010965:17029-17048 Msa1349500:CDS 45.0%
AAGCAGTGTCTGAATTCAGC+TGG - tig0010965:17097-17116 Msa1349500:CDS 45.0%
AGCAGTGTCTGAATTCAGCT+GGG - tig0010965:17098-17117 Msa1349500:CDS 45.0%
ATCTGTAGAGAGCTACTTCC+TGG + tig0010965:17363-17382 None:intergenic 45.0%
CATATCTCAACCTGCCAAAG+TGG - tig0010965:17871-17890 Msa1349500:CDS 45.0%
TATCTCAACCTGCCAAAGTG+GGG - tig0010965:17873-17892 Msa1349500:CDS 45.0%
GCAGCATTCATATAGGTGGT+AGG + tig0010965:18028-18047 None:intergenic 45.0%
!!! ATAAAAAATTCATTTTTTTT+AGG - tig0010965:10320-10339 Msa1349500:intron 5.0%
!!! AACTAAAATTTAATTTATTT+TGG + tig0010965:10778-10797 None:intergenic 5.0%
!! TTAATTATATAAAATCAAAA+TGG + tig0010965:16687-16706 None:intergenic 5.0%
!!! ATTTTATATAATTAAACTTA+AGG - tig0010965:16692-16711 Msa1349500:intron 5.0%
GACCAAAGAGTGAAGTGGAG+GGG - tig0010965:5423-5442 Msa1349500:CDS 50.0%
CTTTGGCAGGTGAATCTGGT+TGG - tig0010965:6182-6201 Msa1349500:intron 50.0%
CACGGCGGAGATAATCAATC+TGG + tig0010965:6319-6338 None:intergenic 50.0%
!! TCATCAATGTTGGGAGCGTC+CGG - tig0010965:6742-6761 Msa1349500:intron 50.0%
TGCTAATTCCCCTGGAACTG+AGG - tig0010965:6802-6821 Msa1349500:CDS 50.0%
GAATGGACAAGAACCCGTGT+AGG + tig0010965:7040-7059 None:intergenic 50.0%
CCAGAGTACGAGCAGTAGAA+TGG + tig0010965:7057-7076 None:intergenic 50.0%
CCATTCTACTGCTCGTACTC+TGG - tig0010965:7054-7073 Msa1349500:intron 50.0%
! AACTGTTATGGGCTGCTGCT+TGG - tig0010965:7193-7212 Msa1349500:CDS 50.0%
! GGCTGCTGCTTGGTTATACA+AGG - tig0010965:7203-7222 Msa1349500:CDS 50.0%
GCTTGGTTATACAAGGCCAG+TGG - tig0010965:7210-7229 Msa1349500:CDS 50.0%
!! CATGTGGGTGCTATTGTTGG+AGG - tig0010965:8129-8148 Msa1349500:intron 50.0%
! CTGTTTGGCTCAATTGGGTC+AGG + tig0010965:8833-8852 None:intergenic 50.0%
ACACAGGTCTATCTGCTGGT+TGG - tig0010965:8898-8917 Msa1349500:intron 50.0%
AAGTGACTGTACGCACTACG+TGG + tig0010965:10243-10262 None:intergenic 50.0%
CGATATCGTTCCTCCTTCTC+AGG - tig0010965:11151-11170 Msa1349500:intron 50.0%
AGCCATGGTTCACTCAACTG+CGG + tig0010965:11670-11689 None:intergenic 50.0%
! AGGAAAAGCGTGTCACACAG+AGG - tig0010965:12493-12512 Msa1349500:intron 50.0%
! GGAAAAGCGTGTCACACAGA+GGG - tig0010965:12494-12513 Msa1349500:intron 50.0%
! TGCTGGACGTCTGATTTTGC+AGG - tig0010965:12757-12776 Msa1349500:intron 50.0%
CAATCAACAGCCTCTTTGCC+CGG + tig0010965:13231-13250 None:intergenic 50.0%
! GCTGTTGATTGCTCTGTGTG+TGG - tig0010965:13240-13259 Msa1349500:intron 50.0%
TGCTCTGTGTGTGGATCTTC+TGG - tig0010965:13249-13268 Msa1349500:intron 50.0%
GTCAAGTGGTTAGGACTACG+GGG - tig0010965:14156-14175 Msa1349500:intron 50.0%
TCAAGTGGTTAGGACTACGG+GGG - tig0010965:14157-14176 Msa1349500:intron 50.0%
AAACCGGGTCTTGCTAACAC+GGG - tig0010965:14780-14799 Msa1349500:intron 50.0%
CATGTGACGTTCAAGGGGAA+TGG - tig0010965:15376-15395 Msa1349500:intron 50.0%
CAACAAACTGCACCCCATGA+TGG + tig0010965:15667-15686 None:intergenic 50.0%
AGGACCAAAGAGTGAAGTGG+AGG - tig0010965:15853-15872 Msa1349500:CDS 50.0%
GGACCAAAGAGTGAAGTGGA+GGG - tig0010965:15854-15873 Msa1349500:CDS 50.0%
GACCAAAGAGTGAAGTGGAG+GGG - tig0010965:5423-5442 Msa1349500:CDS 50.0%
! GTGTCATTGGCAGGTGGATT+TGG - tig0010965:16045-16064 Msa1349500:CDS 50.0%
! CATTGGCAGGTGGATTTGGT+TGG - tig0010965:16049-16068 Msa1349500:CDS 50.0%
! CTTCGCAGTGCTATTCGTTG+GGG - tig0010965:16196-16215 Msa1349500:intron 50.0%
ACCAACCACGCTCTTTACAC+AGG - tig0010965:16249-16268 Msa1349500:intron 50.0%
! ACCTGTGTAAAGAGCGTGGT+TGG + tig0010965:16253-16272 None:intergenic 50.0%
TCACACCTGTGTAAAGAGCG+TGG + tig0010965:16257-16276 None:intergenic 50.0%
TGTGATTGCTAGGTGGGAGA+TGG - tig0010965:16382-16401 Msa1349500:intron 50.0%
TTCGAATTCCCCTGGAACTG+AGG - tig0010965:16474-16493 Msa1349500:CDS 50.0%
CTGCTCGTACTCTGGTTATC+AGG - tig0010965:16881-16900 Msa1349500:intron 50.0%
GGCTGCTTCTTGGCTATACA+AGG - tig0010965:17020-17039 Msa1349500:CDS 50.0%
ACACTGCTTGACTCCAACCT+TGG + tig0010965:17086-17105 None:intergenic 50.0%
! GGAATTCTATGGCGGGAAGA+AGG - tig0010965:17287-17306 Msa1349500:intron 50.0%
TAGCACCATGGTTGAGGTTG+TGG + tig0010965:17561-17580 None:intergenic 50.0%
!! CATGTGGGTGCTATTGTTGG+AGG - tig0010965:8129-8148 Msa1349500:intron 50.0%
GGTTCTGTTGCAGCTTTGCT+TGG - tig0010965:18055-18074 Msa1349500:CDS 50.0%
CTCCCCTCCACTTCACTCTT+TGG + tig0010965:5428-5447 None:intergenic 55.0%
GGAGACTCAGCTCTCTCTGA+TGG - tig0010965:5444-5463 Msa1349500:CDS 55.0%
!! ATTGAGAGAGGGGCACTGAG+GGG + tig0010965:6065-6084 None:intergenic 55.0%
!! GATTGAGAGAGGGGCACTGA+GGG + tig0010965:6066-6085 None:intergenic 55.0%
!! AGATTGAGAGAGGGGCACTG+AGG + tig0010965:6067-6086 None:intergenic 55.0%
TGGCAGGTGAATCTGGTTGG+AGG - tig0010965:6185-6204 Msa1349500:intron 55.0%
! ATCTCCGCCGTGCTATTCGT+TGG - tig0010965:6327-6346 Msa1349500:intron 55.0%
! TCTCCGCCGTGCTATTCGTT+GGG - tig0010965:6328-6347 Msa1349500:intron 55.0%
TACCCCAACGAATAGCACGG+CGG + tig0010965:6334-6353 None:intergenic 55.0%
TCCAACCACGCTCTTCACAC+AGG - tig0010965:6382-6401 Msa1349500:intron 55.0%
ACATGCCTGTGTGAAGAGCG+TGG + tig0010965:6390-6409 None:intergenic 55.0%
ACGCTGCCTGATTCCAACCT+TGG + tig0010965:7269-7288 None:intergenic 55.0%
AGCCGCAGTTGAGTGAACCA+TGG - tig0010965:11665-11684 Msa1349500:intron 55.0%
CGGTGCAGCAGATACAGTCT+TGG - tig0010965:12707-12726 Msa1349500:intron 55.0%
GGAATCATGGCATCTAGCCG+AGG - tig0010965:12728-12747 Msa1349500:intron 55.0%
TCTAGCCGAGGACTCATTGC+TGG - tig0010965:12740-12759 Msa1349500:intron 55.0%
GACGTCCAGCAATGAGTCCT+CGG + tig0010965:12748-12767 None:intergenic 55.0%
TGTCTAGGAACCGGGCAAAG+AGG - tig0010965:13218-13237 Msa1349500:intron 55.0%
! GTCGTGTGCAGAGTACCTTG+TGG + tig0010965:13559-13578 None:intergenic 55.0%
! CTTTGATGGTTGAGAGCGGC+AGG - tig0010965:14609-14628 Msa1349500:intron 55.0%
TGACCCGTGTTAGCAAGACC+CGG + tig0010965:14786-14805 None:intergenic 55.0%
ACGCTCAGGGAAGTTGCCTA+AGG - tig0010965:15833-15852 Msa1349500:CDS 55.0%
CTCCCCTCCACTTCACTCTT+TGG + tig0010965:5428-5447 None:intergenic 55.0%
AGTGAAGTGGAGGGGAGACT+CGG - tig0010965:5431-5450 Msa1349500:CDS 55.0%
! TGGCAGGTGGATTTGGTTGG+AGG - tig0010965:16052-16071 Msa1349500:CDS 55.0%
GGTTGGAGGATACTACGACG+CGG - tig0010965:16066-16085 Msa1349500:CDS 55.0%
GTTGGAGGATACTACGACGC+GGG - tig0010965:16067-16086 Msa1349500:CDS 55.0%
!! TTGGGAGCGTCCAGAAGACA+TGG - tig0010965:16423-16442 Msa1349500:CDS 55.0%
TCATTGCACCCCACTTTGGC+AGG + tig0010965:17884-17903 None:intergenic 55.0%
GCCAAAGTGGGGTGCAATGA+TGG - tig0010965:17884-17903 Msa1349500:CDS 55.0%
GCCATCATTGCACCCCACTT+TGG + tig0010965:17888-17907 None:intergenic 55.0%
! CTCCGCCGTGCTATTCGTTG+GGG - tig0010965:6329-6348 Msa1349500:intron 60.0%
! GCCTGTGTGAAGAGCGTGGT+TGG + tig0010965:6386-6405 None:intergenic 60.0%
!! TTGGGAGCGTCCGGAAGACA+TGG - tig0010965:6751-6770 Msa1349500:CDS 60.0%
AGCTGCAGCCTCAGTTCCAG+GGG + tig0010965:6813-6832 None:intergenic 60.0%
CAGCTGCAGCCTCAGTTCCA+GGG + tig0010965:6814-6833 None:intergenic 60.0%
TCAGCTGCAGCCTCAGTTCC+AGG + tig0010965:6815-6834 None:intergenic 60.0%
TGGAACTGAGGCTGCAGCTG+AGG - tig0010965:6814-6833 Msa1349500:CDS 60.0%
AGGCAGCGTCTGAGTTCAGC+TGG - tig0010965:7280-7299 Msa1349500:intron 60.0%
GGCAGCGTCTGAGTTCAGCT+GGG - tig0010965:7281-7300 Msa1349500:intron 60.0%
GGAGACTCGGCTCTCTCTGA+TGG - tig0010965:15876-15895 Msa1349500:intron 60.0%
AGCTGCAGCCTCAGTTCCAG+GGG + tig0010965:6813-6832 None:intergenic 60.0%
CAGCTGCAGCCTCAGTTCCA+GGG + tig0010965:6814-6833 None:intergenic 60.0%
TCAGCTGCAGCCTCAGTTCC+AGG + tig0010965:6815-6834 None:intergenic 60.0%
TGGAACTGAGGCTGCAGCTG+AGG - tig0010965:6814-6833 Msa1349500:CDS 60.0%
!! AGAGAGGGGCACTGAGGGGT+TGG + tig0010965:6061-6080 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0010965 gene 5234 18111 5234 ID=Msa1349500;Name=Msa1349500
tig0010965 mRNA 5234 18111 5234 ID=Msa1349500-mRNA-1;Parent=Msa1349500;Name=Msa1349500-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.28|0.13|1|0.85|0.90|22|0|1080
tig0010965 exon 17866 18111 17866 ID=Msa1349500-mRNA-1:exon:6978;Parent=Msa1349500-mRNA-1
tig0010965 exon 16995 17154 16995 ID=Msa1349500-mRNA-1:exon:6977;Parent=Msa1349500-mRNA-1
tig0010965 exon 16423 16613 16423 ID=Msa1349500-mRNA-1:exon:6976;Parent=Msa1349500-mRNA-1
tig0010965 exon 16262 16339 16262 ID=Msa1349500-mRNA-1:exon:6975;Parent=Msa1349500-mRNA-1
tig0010965 exon 16004 16156 16004 ID=Msa1349500-mRNA-1:exon:6974;Parent=Msa1349500-mRNA-1
tig0010965 exon 15775 15883 15775 ID=Msa1349500-mRNA-1:exon:6973;Parent=Msa1349500-mRNA-1
tig0010965 exon 15504 15670 15504 ID=Msa1349500-mRNA-1:exon:6972;Parent=Msa1349500-mRNA-1
tig0010965 exon 11994 12077 11994 ID=Msa1349500-mRNA-1:exon:6971;Parent=Msa1349500-mRNA-1
tig0010965 exon 10981 11110 10981 ID=Msa1349500-mRNA-1:exon:6970;Parent=Msa1349500-mRNA-1
tig0010965 exon 10754 10891 10754 ID=Msa1349500-mRNA-1:exon:6969;Parent=Msa1349500-mRNA-1
tig0010965 exon 10567 10655 10567 ID=Msa1349500-mRNA-1:exon:6968;Parent=Msa1349500-mRNA-1
tig0010965 exon 9992 10120 9992 ID=Msa1349500-mRNA-1:exon:6967;Parent=Msa1349500-mRNA-1
tig0010965 exon 9783 9877 9783 ID=Msa1349500-mRNA-1:exon:6966;Parent=Msa1349500-mRNA-1
tig0010965 exon 9330 9406 9330 ID=Msa1349500-mRNA-1:exon:6965;Parent=Msa1349500-mRNA-1
tig0010965 exon 9070 9197 9070 ID=Msa1349500-mRNA-1:exon:6964;Parent=Msa1349500-mRNA-1
tig0010965 exon 7075 7287 7075 ID=Msa1349500-mRNA-1:exon:6963;Parent=Msa1349500-mRNA-1
tig0010965 exon 6751 6951 6751 ID=Msa1349500-mRNA-1:exon:6962;Parent=Msa1349500-mRNA-1
tig0010965 exon 6443 6520 6443 ID=Msa1349500-mRNA-1:exon:6961;Parent=Msa1349500-mRNA-1
tig0010965 exon 6187 6339 6187 ID=Msa1349500-mRNA-1:exon:6960;Parent=Msa1349500-mRNA-1
tig0010965 exon 5949 6057 5949 ID=Msa1349500-mRNA-1:exon:6959;Parent=Msa1349500-mRNA-1
tig0010965 exon 5663 5829 5663 ID=Msa1349500-mRNA-1:exon:6958;Parent=Msa1349500-mRNA-1
tig0010965 exon 5234 5581 5234 ID=Msa1349500-mRNA-1:exon:6957;Parent=Msa1349500-mRNA-1
tig0010965 CDS 17866 18111 17866 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 16995 17154 16995 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 16423 16613 16423 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 16262 16339 16262 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 16004 16156 16004 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 15775 15883 15775 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 15504 15670 15504 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 11994 12077 11994 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 10981 11110 10981 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 10754 10891 10754 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 10567 10655 10567 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 9992 10120 9992 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 9783 9877 9783 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 9330 9406 9330 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 9070 9197 9070 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 7075 7287 7075 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 6751 6951 6751 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 6443 6520 6443 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 6187 6339 6187 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 5949 6057 5949 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 5663 5829 5663 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
tig0010965 CDS 5234 5581 5234 ID=Msa1349500-mRNA-1:cds;Parent=Msa1349500-mRNA-1
Gene Sequence

>Msa1349500

ATGGGGTTCTATTTGTTGATAAGTGGTTTGATCTTGTGGTTTGCCATGAGTAGTAAGAATAATGGTCTATTAGCCATAATGGATGAGGAATTAATTAGTAAAAGTTCCTCATCTAGTTACAACTATGCAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCAGGGAAATTGCCTAAAGACCAAAGAGTGAAGTGGAGGGGAGACTCAGCTCTCTCTGATGGCAAAACTCAAAATGTGAATCTGGTTGGAGGATACTATGATGCTGGTGATAATGTGAAGTTTGGATGGCCAATGTCATTTACAGTCAGCTTATTGAGTTGGGCTGCTGTTGAATATGAAAGTGAGATTTCTTCAGTTAACCAGATTGATTATCTCCGCCGTGCTATTCGTTGGGGAAACGCAGATCATCAATGTTGGGAGCGTCCGGAAGACATGGATACTCCAAGAACACTTTACAAGATTGATGCTAATTCCCCTGGAACTGAGGCTGCAGCTGAGGCTGCTGCTGCACTTTCAGCTGCTTCAATTGTCTTTAAGAAAAAAGACACTCAATATTCATCGAAGTTGTTAAGACATTCAAAATCTTTGTTTGATTTTGCTGACAAGTATAGAGGCACCTACACGGGTTCTTGTCCATTCTACTGCTCGTACTCTGGTTACCAAGATGAACTGTTATGGGCTGCTGCTTGGTTATACAAGGCCAGTGGAGAAAGCAAGTACTTGAAGTACATCACAGATAACCAAGGTTGGAATCAGGCAGCGTCTGAGTTCAGCTGGGACAACAAATTTGTTGGAGTTCAAACATTACTAACACAGGAATTCTATGGTGGGAAGAAGGACTTAGCCAAGATTCATAGTGATGGTGAATCATTTATATGTGCATTGATGCCAGGAAGTTACTCTCTACAGATCAAAACAACTCCTGGTGGACTTTTGTATACTAGAGATAGTAGTAATTTGCAATACACCACAACCTCAACCATGGTACTATTCATTTTCTCCAAAATCCTAAATAAAAATCATATTGATGGAATCCATTGTGGCTCTACCAATTTCACATCCTCTGAAATCAGAGCCTTTGCAAAATCACAGGTTCGAGCAAGAATTGAAGTTTCAGTTCTCAGTTTCCTCAAAATATTGAATGCGTCAAACCCTGCTATATCAGATTTGCCTCTGATTCAAAGAAAATCGAGCAACAGTCGAGTGAATCATGGCCTGTTGACCGAATTATCATATGTTTTTCTCTCTGATTCCATATCTACAAGGTCTCTTATGAGACCTAATGCAGCAAAAGCCTTTGTTAGGGTGTGGAAGGTGATGGAAATGTGCTATCAGATATTGCTTCAGGAAAAGCGTGTCACACAGAGGGAACTCTTCTACAAGCTGCTGTGTGATTCACAACATCTGTTCCCTTCTCAAAAGGACGTCAATAGGACAATCCAAGATCTTGTAGCGTTGCTTCGGTGCAGCAGATACAGTCTTGGAATCATGGCATCTAGCCGAGGACTCATTGCTGGACGTCTGATTTTGCAGGAACCGGGCAAAGAGGCTGTTGATTGCTCTGTGTGTGGATCTTCTGGACATGCAATTTCTGGTGACTTGAATTTGTTAGATAAATTGATTCTAAATGCAGATGCACGTTACATTATAATTGTGGAGAAGCATGCAATATTTCAACGACTTGCTGAAGATAGGTTTTTTAATCAAATTCCAAGCATTCTTATCACAGCTAAAGGTTACCCAGATATTGCCACAAGGAATCCAGCTGGATTAGCTATACTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGTCATACAGATACGCTTGCAATGTCAAGTGGTTAGGACTACGGGGGCATGATCTACCCATGCTGCCTGATCAATCTTTTGTTCCATTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTGATGTCCTCGAGAATCTTACCGGTGGATTTGGTTGGAGGATACTACGACGCGGGTGATAATGTGAAGTTTGGTTGGCCGATGTCTTTTACGGTGAGCTTGTTGAGTTGGACTGCTGTTGAATATGAAAGTGAGATTTCTTCGGTGAACCAGCTTGATTATCTTCGCAGTGCTATTCGTTGGGGTGCAGATTTCATACTTAAAGCTCACACTTCACCAACCACGCTCTTTACACAGGTGGGAGATGGAAACGCAGATCATAATTGTTGGGAGCGTCCAGAAGACATGGATACACCAAGAACAACTTACAAGATTGATTCGAATTCCCCTGGAACTGAGGCTGCAGCTGAGGCTGCTGCCGCTCTTTCTGCTGCTTCAATTGTCTTTAAGAAAACAGATATCAATTATTCATCCAAGCTATTAAGCCAGTCAAAATCTTTGTTTGATTTTGCTGACAAATATAGAGGTTCTTACTCGGGTTCTTGCCCATTTTACTGCTCGTACTCTGGTTATCAGGATGAACTATTATGGGCTGCTTCTTGGCTATACAAGGCTAGTGGGGAAAGCAAGTACTTGACGTACATCACAAGTAACCAAGGTTGGAGTCAAGCAGTGTCTGAATTCAGCTGGGATAACAAATTTGTTGGAGCTCAAACATTACTAACACAGGAATTCTATGGCGGGAAGAAGGAGTTAGCCAAGATTAAGACTGATGGTGAATCATTTATATGTGCATTGATGCCAGGAAGTAGCTCTCTACAGATTAGAACAACTCCAGGTGGGCTTCTGTATATTAGAGATGGTAGTAATTTGCAATATACCACAACCTCAACCATGGTGCTATTCATTTTCTCCAAAATCTTAAATAAAAATCATATTGATGGAATTCAGTGTGGCTCTGCCCATTTCTCCCCCTCTGAAATTAGAGCCTTTGCAAAATCACAGGTGGACTACATATTAGGAAACAATCCCATGAAGATGTCATACATGGTGGGATATGGGAGTAAATATCCAAAACAATTACATCACAGAGGTTCTTCCATCCCTTCAATCATATCTCAACCTGCCAAAGTGGGGTGCAATGATGGCCAGAACTATTTCTCTTCATCTAATCCAAATCCTAATATTCATGTGGGTGCTATTGTTGGAGGACCAAATTCTAATGACCAATACAATGATGCAAGATCTGATTACTCTCATGCAGAACCTACCACCTATATGAATGCTGCTTTTGTTGGTTCTGTTGCAGCTTTGCTTGGTGAAACTAACACCGAGACTCTTCAATTTTCTTGA
Protein sequence

>Msa1349500

MGFYLLISGLILWFAMSSKNNGLLAIMDEELISKSSSSSYNYADALGKAILFFEGQRSGKLPKDQRVKWRGDSALSDGKTQNVNLVGGYYDAGDNVKFGWPMSFTVSLLSWAAVEYESEISSVNQIDYLRRAIRWGNADHQCWERPEDMDTPRTLYKIDANSPGTEAAAEAAAALSAASIVFKKKDTQYSSKLLRHSKSLFDFADKYRGTYTGSCPFYCSYSGYQDELLWAAAWLYKASGESKYLKYITDNQGWNQAASEFSWDNKFVGVQTLLTQEFYGGKKDLAKIHSDGESFICALMPGSYSLQIKTTPGGLLYTRDSSNLQYTTTSTMVLFIFSKILNKNHIDGIHCGSTNFTSSEIRAFAKSQVRARIEVSVLSFLKILNASNPAISDLPLIQRKSSNSRVNHGLLTELSYVFLSDSISTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSQHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLILQEPGKEAVDCSVCGSSGHAISGDLNLLDKLILNADARYIIIVEKHAIFQRLAEDRFFNQIPSILITAKGYPDIATRNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQIAQSLMSSRILPVDLVGGYYDAGDNVKFGWPMSFTVSLLSWTAVEYESEISSVNQLDYLRSAIRWGADFILKAHTSPTTLFTQVGDGNADHNCWERPEDMDTPRTTYKIDSNSPGTEAAAEAAAALSAASIVFKKTDINYSSKLLSQSKSLFDFADKYRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLTYITSNQGWSQAVSEFSWDNKFVGAQTLLTQEFYGGKKELAKIKTDGESFICALMPGSSSLQIRTTPGGLLYIRDGSNLQYTTTSTMVLFIFSKILNKNHIDGIQCGSAHFSPSEIRAFAKSQVDYILGNNPMKMSYMVGYGSKYPKQLHHRGSSIPSIISQPAKVGCNDGQNYFSSSNPNPNIHVGAIVGGPNSNDQYNDARSDYSHAEPTTYMNAAFVGSVAALLGETNTETLQFS*