AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1351810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351810 MtrunA17_Chr7g0271251 90.129 699 48 5 1 687 2 691 0.0 1254
Msa1351810 MtrunA17_Chr1g0193321 47.241 743 291 18 1 675 1 710 0.0 570
Msa1351810 MtrunA17_Chr1g0182791 41.981 212 81 6 370 551 260 459 1.79e-34 138
Msa1351810 MtrunA17_Chr7g0262691 40.541 222 89 8 369 558 189 399 3.58e-32 130
Msa1351810 MtrunA17_Chr3g0095391 35.806 310 135 11 242 543 148 401 2.04e-31 128
Msa1351810 MtrunA17_Chr7g0270871 49.655 145 53 6 376 514 152 282 1.34e-27 115
Msa1351810 MtrunA17_Chr1g0153241 52.577 97 35 2 430 526 86 171 2.46e-22 97.4
Msa1351810 MtrunA17_Chr5g0402031 35.849 212 99 7 438 648 114 289 6.54e-22 97.8
Msa1351810 MtrunA17_Chr7g0231461 41.667 108 54 2 393 499 260 359 1.09e-17 86.7
Msa1351810 MtrunA17_Chr4g0074161 44.048 84 36 2 431 511 208 283 1.44e-15 79.3
Msa1351810 MtrunA17_Chr1g0190731 42.667 75 35 1 431 505 195 261 1.27e-13 72.8
Msa1351810 MtrunA17_Chr1g0152131 45.070 71 32 1 431 501 262 325 2.44e-13 72.8
Msa1351810 MtrunA17_Chr4g0035101 36.036 111 62 2 391 501 107 208 3.49e-13 71.6
Msa1351810 MtrunA17_Chr3g0144641 39.759 83 41 2 419 501 183 256 1.17e-12 70.5
Msa1351810 MtrunA17_Chr8g0363921 42.254 71 34 1 431 501 153 216 1.18e-12 68.9
Msa1351810 MtrunA17_Chr5g0393721 31.304 115 67 2 427 541 222 324 1.24e-12 69.7
Msa1351810 MtrunA17_Chr5g0415291 38.298 94 47 2 408 501 95 177 1.48e-12 68.2
Msa1351810 MtrunA17_Chr1g0207311 38.095 84 39 2 432 510 194 269 2.58e-12 68.2
Msa1351810 MtrunA17_Chr7g0234761 43.662 71 33 1 431 501 319 382 3.22e-12 69.7
Msa1351810 MtrunA17_Chr8g0339091 43.662 71 33 1 431 501 293 356 3.89e-12 69.3
Msa1351810 MtrunA17_Chr5g0421111 43.662 71 33 1 431 501 367 430 4.73e-12 68.9
Msa1351810 MtrunA17_Chr8g0365941 43.662 71 33 1 431 501 307 370 4.78e-12 68.9
Msa1351810 MtrunA17_Chr1g0207301 40.909 66 31 1 445 510 304 361 5.22e-12 68.2
Msa1351810 MtrunA17_Chr3g0134741 42.029 69 32 1 442 510 242 302 9.54e-12 67.0
Msa1351810 MtrunA17_Chr3g0131771 42.254 71 34 1 431 501 149 212 1.57e-11 66.2
Msa1351810 MtrunA17_Chr1g0152651 42.029 69 32 1 442 510 287 347 4.11e-11 65.5
Msa1351810 MtrunA17_Chr8g0385911 35.714 84 47 1 418 501 134 210 8.72e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351810 AT1G09530.3 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT1G09530.2 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT1G09530.5 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT1G09530.1 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT1G09530.4 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT1G09530.6 31.261 595 278 18 1 586 1 473 2.16e-47 176
Msa1351810 AT2G46970.2 36.531 271 132 11 367 627 130 370 1.28e-29 121
Msa1351810 AT2G46970.3 36.531 271 132 11 367 627 139 379 1.99e-29 121
Msa1351810 AT2G46970.1 36.531 271 132 11 367 627 161 401 2.60e-29 121
Msa1351810 AT2G20180.7 40.206 194 79 7 370 543 155 331 8.96e-28 116
Msa1351810 AT2G20180.1 40.206 194 79 7 370 543 155 331 8.96e-28 116
Msa1351810 AT2G20180.5 40.206 194 79 7 370 543 155 331 8.96e-28 116
Msa1351810 AT2G20180.4 38.863 211 90 8 355 543 209 402 3.55e-27 116
Msa1351810 AT2G20180.6 38.863 211 90 8 355 543 209 402 3.55e-27 116
Msa1351810 AT2G20180.2 38.863 211 90 8 355 543 209 402 3.55e-27 116
Msa1351810 AT2G20180.3 38.863 211 90 8 355 543 209 402 3.55e-27 116
Msa1351810 AT2G20180.8 47.328 131 50 3 370 498 226 339 1.38e-24 106
Msa1351810 AT4G28800.1 41.935 155 66 7 422 570 242 378 6.49e-23 102
Msa1351810 AT4G36930.1 60.714 84 25 1 435 518 197 272 1.46e-21 97.8
Msa1351810 AT5G67110.1 59.036 83 24 3 432 513 90 163 2.04e-20 90.5
Msa1351810 AT4G28800.2 40.645 155 62 7 422 570 254 384 2.08e-20 95.1
Msa1351810 AT4G28790.1 40.146 137 62 4 413 539 255 381 2.13e-20 94.7
Msa1351810 AT4G28815.2 44.860 107 47 3 419 524 58 153 2.28e-20 91.3
Msa1351810 AT4G28815.1 44.860 107 47 3 419 524 134 229 9.33e-20 91.3
Msa1351810 AT3G59060.1 42.604 169 65 6 413 574 237 380 1.01e-19 93.2
Msa1351810 AT3G59060.3 42.604 169 65 6 413 574 237 380 1.12e-19 92.8
Msa1351810 AT3G59060.2 42.604 169 65 6 413 574 237 380 1.12e-19 92.8
Msa1351810 AT3G59060.4 42.604 169 65 6 413 574 237 380 1.12e-19 92.8
Msa1351810 AT4G00050.2 45.714 105 39 3 400 500 78 168 8.12e-19 88.2
Msa1351810 AT4G00050.1 45.714 105 39 3 400 500 180 270 2.64e-18 88.2
Msa1351810 AT4G00050.3 45.714 105 39 3 400 500 180 270 3.09e-18 87.8
Msa1351810 AT2G43010.2 72.059 68 11 1 432 499 254 313 1.67e-17 85.9
Msa1351810 AT2G43010.1 72.059 68 11 1 432 499 254 313 1.78e-17 85.9
Msa1351810 AT2G43010.4 72.059 68 11 1 432 499 254 313 2.09e-17 85.5
Msa1351810 AT2G43010.3 72.059 68 11 1 432 499 261 320 2.15e-17 85.9
Msa1351810 AT2G43010.5 72.059 68 11 1 432 499 296 355 3.15e-17 85.5
Msa1351810 AT4G28790.2 52.632 76 28 1 422 497 264 331 2.69e-16 81.3
Msa1351810 AT2G24260.2 48.000 75 31 1 431 505 37 103 2.84e-16 79.7
Msa1351810 AT3G62090.1 39.370 127 58 3 432 556 168 277 6.08e-16 80.5
Msa1351810 AT3G62090.2 39.370 127 58 3 432 556 185 294 8.23e-16 80.1
Msa1351810 AT2G24260.1 49.296 71 28 1 431 501 140 202 9.12e-16 79.7
Msa1351810 AT5G58010.1 46.667 75 32 1 431 505 101 167 1.66e-15 78.2
Msa1351810 AT4G30980.1 46.667 75 32 1 431 505 132 198 1.71e-15 78.6
Msa1351810 AT4G30980.2 46.667 75 32 1 431 505 180 246 4.43e-15 77.8
Msa1351810 AT1G68920.3 28.972 214 129 6 290 501 175 367 1.45e-13 73.9
Msa1351810 AT3G23690.1 31.944 144 83 4 361 501 125 256 2.26e-13 72.8
Msa1351810 AT1G10120.2 45.205 73 33 1 429 501 206 271 2.47e-13 72.8
Msa1351810 AT1G10120.1 45.205 73 33 1 429 501 206 271 2.47e-13 72.8
Msa1351810 AT5G50915.3 29.143 175 89 6 341 501 48 201 5.84e-13 70.1
Msa1351810 AT5G50915.4 29.143 175 89 6 341 501 48 201 5.84e-13 70.1
Msa1351810 AT5G50915.1 29.143 175 89 6 341 501 48 201 1.12e-12 69.7
Msa1351810 AT5G50915.2 29.143 175 89 6 341 501 48 201 1.12e-12 69.7
Msa1351810 AT1G68920.1 28.037 214 132 5 290 501 175 368 1.46e-12 70.9
Msa1351810 AT1G68920.4 28.037 214 132 5 290 501 175 368 1.46e-12 70.9
Msa1351810 AT1G68920.2 28.037 214 132 5 290 501 175 368 1.46e-12 70.9
Msa1351810 AT1G59640.1 42.254 71 34 1 431 501 138 201 3.06e-12 67.8
Msa1351810 AT3G07340.2 43.662 71 33 1 431 501 260 323 3.19e-12 69.7
Msa1351810 AT1G27740.1 30.882 136 79 4 386 518 128 251 3.41e-12 67.8
Msa1351810 AT1G26260.3 42.466 73 35 1 429 501 172 237 3.58e-12 68.9
Msa1351810 AT1G26260.5 42.466 73 35 1 429 501 201 266 3.60e-12 68.9
Msa1351810 AT3G07340.1 43.662 71 33 1 431 501 260 323 3.86e-12 69.3
Msa1351810 AT5G48560.2 43.662 71 33 1 431 501 303 366 4.00e-12 69.3
Msa1351810 AT1G26260.4 42.466 73 35 1 429 501 223 288 4.19e-12 68.9
Msa1351810 AT1G26260.1 42.466 73 35 1 429 501 223 288 4.19e-12 68.9
Msa1351810 AT1G26260.6 42.466 73 35 1 429 501 223 288 4.19e-12 68.9
Msa1351810 AT1G26260.2 42.466 73 35 1 429 501 223 288 4.19e-12 68.9
Msa1351810 AT5G48560.1 43.662 71 33 1 431 501 303 366 4.67e-12 69.3
Msa1351810 AT2G14760.1 36.905 84 45 1 427 510 235 310 6.82e-12 67.8
Msa1351810 AT4G33880.1 42.254 71 33 1 442 512 279 341 9.81e-12 67.4
Msa1351810 AT4G34530.1 39.437 71 36 1 431 501 174 237 1.01e-11 67.4
Msa1351810 AT2G14760.3 41.096 73 35 1 438 510 259 323 1.01e-11 67.4
Msa1351810 AT1G59640.2 42.254 71 34 1 431 501 138 201 1.25e-11 67.0
Msa1351810 AT4G28811.1 51.136 88 34 2 414 500 335 414 1.43e-11 68.2
Msa1351810 AT5G62610.2 40.845 71 35 1 431 501 155 218 1.55e-11 66.2
Msa1351810 AT5G62610.1 40.845 71 35 1 431 501 155 218 1.55e-11 66.2
Msa1351810 AT5G43175.1 35.484 93 47 3 431 518 132 216 1.78e-11 65.1
Msa1351810 AT4G36540.1 39.437 71 36 1 431 501 143 206 4.68e-11 65.1
Msa1351810 AT4G36540.2 39.437 71 36 1 431 501 143 206 4.99e-11 64.7
Msa1351810 AT5G61270.2 43.860 114 50 5 401 513 47 147 8.63e-11 63.9
Msa1351810 AT5G61270.3 43.860 114 50 5 401 513 47 147 8.63e-11 63.9

Find 188 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGTTGTGGGGCTTGTTTC+AGG 0.130485 tig0012394:-63968 Msa1351810:five_prime_UTR
AATTATTAGTGTTATTAAAT+AGG 0.179149 tig0012394:-64023 Msa1351810:five_prime_UTR
CCGAGTTCTGTTTGTTTCTA+TGG 0.180500 tig0012394:+64252 None:intergenic
CAACTCAAACAAATCGTTTC+TGG 0.187942 tig0012394:+63632 None:intergenic
CAAATTCGTTGTTGCTTGTT+AGG 0.202154 tig0012394:+64086 None:intergenic
AGAAACATTGGCATCTAAAT+TGG 0.237157 tig0012394:+59624 None:intergenic
CTAACAAGCAACAACGAATT+TGG 0.243187 tig0012394:-64085 Msa1351810:five_prime_UTR
TTGCCAAATTGCACAGGTTT+TGG 0.249470 tig0012394:-60175 Msa1351810:three_prime_UTR
CAAACTTCCAATCAAGTTCT+TGG 0.266868 tig0012394:-62682 Msa1351810:CDS
AGCCCAAACAATTGAGGATT+TGG 0.271198 tig0012394:+61193 None:intergenic
GAAGTTTAGGAGCGTCTTAT+TGG 0.277995 tig0012394:-60343 Msa1351810:three_prime_UTR
TTCTTTGCTCCCACACGTTC+TGG 0.281144 tig0012394:+62910 None:intergenic
AAATTGTAAAAGAAGATTAA+TGG 0.290810 tig0012394:+64458 None:intergenic
GGCTTCACCCTCTAAGTTAA+AGG 0.292607 tig0012394:-61035 Msa1351810:CDS
TCAATTAGATTTAGAGAATC+AGG 0.292631 tig0012394:-63096 Msa1351810:CDS
CAACATGTATTCAGATTCTT+TGG 0.295631 tig0012394:-60060 Msa1351810:three_prime_UTR
ATGCCAAAACCTGTGCAATT+TGG 0.295761 tig0012394:+60172 None:intergenic
GTTGCCATGCAAATGGGGTT+GGG 0.298299 tig0012394:-61292 Msa1351810:CDS
CAGGGTTGATTTGAAACCTT+TGG 0.301441 tig0012394:-62776 Msa1351810:CDS
AGACCAAATCCTCAATTGTT+TGG 0.305048 tig0012394:-61196 Msa1351810:CDS
CACTATTTACATCGTAGTTC+TGG 0.309710 tig0012394:-63354 Msa1351810:CDS
AAGGGTCATGATAAATATTC+AGG 0.318516 tig0012394:-63528 Msa1351810:CDS
CGATAGTGCCCATGCTTTGC+TGG 0.321114 tig0012394:-60469 Msa1351810:CDS
AGATTTAGAGAATCAGGTTT+AGG 0.342984 tig0012394:-63090 Msa1351810:CDS
GAAAGCATGTTACTAAATTC+CGG 0.346320 tig0012394:-59871 Msa1351810:three_prime_UTR
ATTATTAGTGTTATTAAATA+GGG 0.346337 tig0012394:-64022 Msa1351810:five_prime_UTR
GACCAAATCCTCAATTGTTT+GGG 0.348880 tig0012394:-61195 Msa1351810:CDS
GGTTTCTTACATGAACTATC+TGG 0.353172 tig0012394:-63333 Msa1351810:CDS
TAACGTTCAGTTGTACTTGC+AGG 0.354810 tig0012394:-60313 Msa1351810:three_prime_UTR
CATATATCTATGTTACAAAA+TGG 0.356063 tig0012394:-60000 Msa1351810:three_prime_UTR
GTTTGGGCTTCAAGCTGGTC+AGG 0.356213 tig0012394:-61179 Msa1351810:CDS
TCCTCTGTTTGCTCTGACAA+TGG 0.356829 tig0012394:-62598 Msa1351810:CDS
CATTGGATCCTTTAACTTAG+AGG 0.361856 tig0012394:+61027 None:intergenic
ATTGGAAGTTTGATCAACTT+TGG 0.364253 tig0012394:+62693 None:intergenic
TTGCCATGCAAATGGGGTTG+GGG 0.365073 tig0012394:-61291 Msa1351810:CDS
GAGTCCATCTCATACTCTTA+AGG 0.368152 tig0012394:-63547 Msa1351810:CDS
CGACGGCATATTTAACTGAT+TGG 0.373186 tig0012394:+63149 None:intergenic
GATCATGGACGAGGCGTTAT+GGG 0.378376 tig0012394:-62353 Msa1351810:CDS
CATAGCATTAGCATACTTGT+TGG 0.381894 tig0012394:+59912 None:intergenic
ACGATTTGTTTGAGTTGGTT+TGG 0.382384 tig0012394:-63626 Msa1351810:CDS
TCTGGACTTGCTGCTTTACA+TGG 0.382675 tig0012394:-61226 Msa1351810:CDS
TGATCATGGACGAGGCGTTA+TGG 0.385981 tig0012394:-62354 Msa1351810:CDS
TGTTGCCATGCAAATGGGGT+TGG 0.393996 tig0012394:-61293 Msa1351810:CDS
GGCAACACTCATGGGTGAAA+AGG 0.394110 tig0012394:+61309 None:intergenic
TTCATTACGGTTGAGGAAGA+TGG 0.397344 tig0012394:+63006 None:intergenic
ATTCCTGCTGGTAACGTCAT+AGG 0.398850 tig0012394:+61361 None:intergenic
TCATCTTGACTTGAAGAAAC+AGG 0.406226 tig0012394:+63426 None:intergenic
TCATCAAAAGTTGATTTAAG+TGG 0.412874 tig0012394:-62850 Msa1351810:CDS
ACTCTCACCAAGAACTTGAT+TGG 0.416264 tig0012394:+62675 None:intergenic
ATCAGTCAGTGGAGCCATCC+AGG 0.417657 tig0012394:-62795 Msa1351810:CDS
AGGTCAACCTTGTTGCAATT+CGG 0.419974 tig0012394:+62095 None:intergenic
TTAAGTTTCCTCTTGTACTC+TGG 0.420155 tig0012394:+60230 None:intergenic
TAGAAAGAGAGAATAGATTC+AGG 0.422135 tig0012394:+64504 None:intergenic
AAAATGGGTGAAATTCATTA+CGG 0.424400 tig0012394:+62993 None:intergenic
ACAGCTGATGAGTTCATAAC+AGG 0.425607 tig0012394:+61106 None:intergenic
AACTCAAACAAATCGTTTCT+GGG 0.426922 tig0012394:+63633 None:intergenic
CTTCCTGTTGCACATACATC+TGG 0.427695 tig0012394:-61244 Msa1351810:CDS
ACTTAAAAGTCATTGAGGTT+GGG 0.427858 tig0012394:-60213 Msa1351810:three_prime_UTR
AGTCCAGATGTATGTGCAAC+AGG 0.429077 tig0012394:+61241 None:intergenic
AACTTAAAAGTCATTGAGGT+TGG 0.429207 tig0012394:-60214 Msa1351810:three_prime_UTR
CAATTGTTTGGGCTTCAAGC+TGG 0.432706 tig0012394:-61184 Msa1351810:CDS
AAAGCATGTTACTAAATTCC+GGG 0.438941 tig0012394:-59870 Msa1351810:three_prime_UTR
ATTGACCATGCACTAAAATC+TGG 0.439314 tig0012394:+63595 None:intergenic
GCCTTCATTGAGGTTTCCTT+AGG 0.439934 tig0012394:-59694 Msa1351810:three_prime_UTR
CATTTGCATGGCAACACTCA+TGG 0.440440 tig0012394:+61300 None:intergenic
ACTTACACAGATGATTGATC+TGG 0.443296 tig0012394:+63764 None:intergenic
GTTACGTTACGCAAGAAACT+TGG 0.447971 tig0012394:-64389 Msa1351810:five_prime_UTR
TTGAGGATAAAATAAAGATT+CGG 0.449816 tig0012394:+64204 None:intergenic
AAGTTTGAGGATTTAGATAA+CGG 0.451329 tig0012394:-63471 Msa1351810:CDS
AAGCAAAGAAAATTTATTTG+TGG 0.456578 tig0012394:+63287 None:intergenic
CATGAGTGTTGCCATGCAAA+TGG 0.458192 tig0012394:-61299 Msa1351810:CDS
TGATAGACTTAACAAGTTCC+CGG 0.459979 tig0012394:+59852 None:intergenic
AACAAAGATGCAGCTGTGAT+AGG 0.462201 tig0012394:-62889 Msa1351810:CDS
CAGAAACGATTTGTTTGAGT+TGG 0.463606 tig0012394:-63631 Msa1351810:CDS
AGTCCATCTCATACTCTTAA+GGG 0.467462 tig0012394:-63546 Msa1351810:CDS
ACTAATGGAAACCGTGGAAT+CGG 0.467680 tig0012394:-61056 Msa1351810:CDS
AAATCTAATTGATTCAAATG+AGG 0.470228 tig0012394:+63107 None:intergenic
AATTGCAAGTGAAGAACCCT+TGG 0.474008 tig0012394:+63206 None:intergenic
ATGAGTGTTGCCATGCAAAT+GGG 0.476275 tig0012394:-61298 Msa1351810:CDS
TGCCATGCAAATGGGGTTGG+GGG 0.478491 tig0012394:-61290 Msa1351810:CDS
GCAACACTCATGGGTGAAAA+GGG 0.478775 tig0012394:+61310 None:intergenic
ACTTGTTACGAAATTAACCT+TGG 0.480063 tig0012394:+64432 None:intergenic
CTTGGTGAGAGTCGCAGAAA+AGG 0.480139 tig0012394:-62664 Msa1351810:CDS
GATACATCTTCTTTGCAAGC+AGG 0.485143 tig0012394:+62715 None:intergenic
GGTGAAATTCATTACGGTTG+AGG 0.487024 tig0012394:+62999 None:intergenic
CATGACAGTACTATAGTTGT+GGG 0.490727 tig0012394:-63980 Msa1351810:five_prime_UTR
TGAGTTCATAACAGGCTCTC+CGG 0.490845 tig0012394:+61114 None:intergenic
AATCTAATTGATTCAAATGA+GGG 0.495878 tig0012394:+63108 None:intergenic
TTTGGGCTTCAAGCTGGTCA+GGG 0.497255 tig0012394:-61178 Msa1351810:CDS
TAGTGGAACAGCAGGACTAA+TGG 0.497439 tig0012394:-61071 Msa1351810:CDS
AGGTGAGTTCCTTGAAATTG+AGG 0.498352 tig0012394:+61265 None:intergenic
TACAAGGATAGGAAAGTTTG+AGG 0.498732 tig0012394:-63484 Msa1351810:CDS
ACCGTCTTTCGTTTATGAGA+TGG 0.501696 tig0012394:-59805 Msa1351810:three_prime_UTR
GCTTGAAGCCCAAACAATTG+AGG 0.502101 tig0012394:+61187 None:intergenic
CACTGACTGATGACAATGTA+TGG 0.502818 tig0012394:+62807 None:intergenic
AACAAATCAAATGTCTATCC+AGG 0.503101 tig0012394:-60957 Msa1351810:intron
AAAGCTAATCTTCAGAACAT+TGG 0.503501 tig0012394:-62949 Msa1351810:CDS
TCATTGAGGTTTCCTTAGGA+AGG 0.505985 tig0012394:-59690 Msa1351810:three_prime_UTR
TCATGACCTATGTGACAAAC+CGG 0.506376 tig0012394:+63998 None:intergenic
TGCATGTGCTGCATTCCTGC+TGG 0.506406 tig0012394:+61349 None:intergenic
GAGTTCATAACAGGCTCTCC+GGG 0.506487 tig0012394:+61115 None:intergenic
TTTCTTCACAATGTGCATGC+TGG 0.509695 tig0012394:+63040 None:intergenic
ATTGGATCCTTTAACTTAGA+GGG 0.511226 tig0012394:+61028 None:intergenic
TAGTGTTATTAAATAGGGAC+CGG 0.511725 tig0012394:-64017 Msa1351810:five_prime_UTR
AATGAAACAAATACAAGGAT+AGG 0.513186 tig0012394:-63495 Msa1351810:CDS
GAATCTGAATACATGTTGGC+AGG 0.513744 tig0012394:+60065 None:intergenic
TTAGGTGAGAATAATACAAA+AGG 0.513763 tig0012394:-63072 Msa1351810:CDS
TAAACAAGGTATCCTTTCCA+AGG 0.516786 tig0012394:-63223 Msa1351810:CDS
TTAAATGCTAGTGGAACAGC+AGG 0.517982 tig0012394:-61079 Msa1351810:CDS
AACATTGAAGCACATGGCAT+TGG 0.518946 tig0012394:+61145 None:intergenic
GGCGGATAAAGCTTCAATGC+TGG 0.519274 tig0012394:-61571 Msa1351810:CDS
TTCAGATAGATTGTGCACTT+CGG 0.519860 tig0012394:+62310 None:intergenic
AGGAATGCAGCACATGCATG+CGG 0.519863 tig0012394:-61344 Msa1351810:CDS
GGTGTTAAAAGAACTGATCA+TGG 0.520660 tig0012394:-62368 Msa1351810:CDS
TCATTACGGTTGAGGAAGAT+GGG 0.521159 tig0012394:+63007 None:intergenic
CTTACACAGATGATTGATCT+GGG 0.521769 tig0012394:+63765 None:intergenic
TTTGACTTGCCAAATTGCAC+AGG 0.522988 tig0012394:-60181 Msa1351810:three_prime_UTR
TCAAGAGATTTCGGCTCCAA+AGG 0.523726 tig0012394:+62760 None:intergenic
TTTACGCAGATTATGACAAT+GGG 0.530246 tig0012394:-61403 Msa1351810:intron
ATTTGATGACGATGATGCCT+TGG 0.533845 tig0012394:-63401 Msa1351810:CDS
TAAAGCTTCAATGCTGGATG+AGG 0.536704 tig0012394:-61565 Msa1351810:CDS
GTTTGAATGAAATTATTACA+AGG 0.536877 tig0012394:-63449 Msa1351810:CDS
AGCAAATTACATTATATCAA+AGG 0.537362 tig0012394:+59729 None:intergenic
TAGGGACCGGTTTGTCACAT+AGG 0.540600 tig0012394:-64004 Msa1351810:five_prime_UTR
GCTGTAGAATTAAATGCTAG+TGG 0.540713 tig0012394:-61088 Msa1351810:CDS
ACTTGGACTAGAAAATTTGT+CGG 0.542402 tig0012394:-64372 Msa1351810:five_prime_UTR
TCCTAAGGAAACCTCAATGA+AGG 0.543312 tig0012394:+59693 None:intergenic
TCATGACAGTACTATAGTTG+TGG 0.544478 tig0012394:-63981 Msa1351810:five_prime_UTR
TGGTAGTGTGAAGCAACAAC+CGG 0.544994 tig0012394:-60519 Msa1351810:intron
AGGAAACTTAAAAGTCATTG+AGG 0.547488 tig0012394:-60218 Msa1351810:three_prime_UTR
AACATTAAAGGACCTTCCTA+AGG 0.548974 tig0012394:+59678 None:intergenic
TCAATGTAGCGTATTTATGT+TGG 0.550514 tig0012394:-63908 Msa1351810:five_prime_UTR
ATTATGACAATGGGAAGTCA+TGG 0.554557 tig0012394:-61394 Msa1351810:CDS
TCATGCAGAGACGAAGAGAC+AGG 0.554875 tig0012394:-62154 Msa1351810:intron
TGTGAGTTCACATTTGACAT+TGG 0.556678 tig0012394:+61010 None:intergenic
ATACATGTTGGCAGGAAACA+TGG 0.556693 tig0012394:+60073 None:intergenic
AGAGAAAGAATACTTGCAGT+TGG 0.557431 tig0012394:+61514 None:intergenic
AGTGCACAATCTATCTGAAA+GGG 0.562116 tig0012394:-62306 Msa1351810:intron
ATTTGCATGGCAACACTCAT+GGG 0.564314 tig0012394:+61301 None:intergenic
AAGTGCACAATCTATCTGAA+AGG 0.566770 tig0012394:-62307 Msa1351810:CDS
TGCAATAATAGTGATTCTCT+CGG 0.571218 tig0012394:+64281 None:intergenic
GAAATTCTCCAGAGTACAAG+AGG 0.572059 tig0012394:-60238 Msa1351810:three_prime_UTR
TTCATCAAGACCAGAACGTG+TGG 0.573082 tig0012394:-62920 Msa1351810:CDS
ACTTGCTGCTTTACATGGGA+TGG 0.575642 tig0012394:-61221 Msa1351810:CDS
CAAAGAATCTGAATACATGT+TGG 0.583988 tig0012394:+60061 None:intergenic
CCATAGAAACAAACAGAACT+CGG 0.585176 tig0012394:-64252 Msa1351810:five_prime_UTR
CTGGACTTGCTGCTTTACAT+GGG 0.587526 tig0012394:-61225 Msa1351810:CDS
ATGCCTATGACGTTACCAGC+AGG 0.590867 tig0012394:-61364 Msa1351810:CDS
ACCATCTCATAAACGAAAGA+CGG 0.591785 tig0012394:+59804 None:intergenic
GGTTTCAAATCAACCCTGGA+TGG 0.593516 tig0012394:+62781 None:intergenic
AGAGGGTGAAGCCGATTCCA+CGG 0.595574 tig0012394:+61045 None:intergenic
CATGCAAAGGGGTGTGCAGT+GGG 0.596880 tig0012394:+59971 None:intergenic
TTAGCTTTCACAATAGCCGC+AGG 0.598322 tig0012394:+62964 None:intergenic
CTAAGTAAAGTAAACACTTG+AGG 0.599407 tig0012394:+64187 None:intergenic
GCCTTGGTTGAATTGTGCAA+TGG 0.600384 tig0012394:-63385 Msa1351810:CDS
GGCAGCAAAGTCATTTGTAG+TGG 0.603034 tig0012394:+63308 None:intergenic
CAAAGGTTTCAAATCAACCC+TGG 0.605010 tig0012394:+62777 None:intergenic
AAACAAGGTATCCTTTCCAA+GGG 0.605300 tig0012394:-63222 Msa1351810:CDS
TGGACTTGAACAATCAAAAG+TGG 0.608631 tig0012394:-60496 Msa1351810:CDS
TCAGTCAGTGGAGCCATCCA+GGG 0.609277 tig0012394:-62794 Msa1351810:CDS
AGAATCACTATTATTGCATG+TGG 0.610872 tig0012394:-64276 Msa1351810:five_prime_UTR
CAGATGTATGTGCAACAGGA+AGG 0.625034 tig0012394:+61245 None:intergenic
AAAAGAACTGATCATGGACG+AGG 0.626096 tig0012394:-62362 Msa1351810:CDS
TGACCCTTAAGAGTATGAGA+TGG 0.635956 tig0012394:+63543 None:intergenic
CAAGTGAAGAACCCTTGGAA+AGG 0.639273 tig0012394:+63211 None:intergenic
AAGACAGAGAATTCTATCAT+CGG 0.640566 tig0012394:+59769 None:intergenic
TGAGTGTTGCCATGCAAATG+GGG 0.642524 tig0012394:-61297 Msa1351810:CDS
AGCAGGACTAATGGAAACCG+TGG 0.642653 tig0012394:-61062 Msa1351810:CDS
GCATGCAAAGGGGTGTGCAG+TGG 0.643932 tig0012394:+59970 None:intergenic
AAGTGATTCACATCACTGCA+AGG 0.646942 tig0012394:-60037 Msa1351810:three_prime_UTR
ATGCTAATGAAACAAATACA+AGG 0.649445 tig0012394:-63500 Msa1351810:CDS
TCATCAAGACCAGAACGTGT+GGG 0.654328 tig0012394:-62919 Msa1351810:CDS
TCCATTGCACAATTCAACCA+AGG 0.657257 tig0012394:+63384 None:intergenic
ATGTGGCATAACTCATGCAG+AGG 0.662299 tig0012394:+63833 None:intergenic
GAAGAGACAGGATCAATGAG+AGG 0.663392 tig0012394:-62142 Msa1351810:CDS
TAAGAAAACATTGAAGCACA+TGG 0.666915 tig0012394:+61139 None:intergenic
TGACATTTATGCAACAACGA+CGG 0.670449 tig0012394:+63132 None:intergenic
TTGCAGGTTATGACTCATTG+CGG 0.673850 tig0012394:-60297 Msa1351810:three_prime_UTR
ACTCATACCGAATTGCAACA+AGG 0.682291 tig0012394:-62102 Msa1351810:CDS
TTTAGTGACTCTCATAAACA+AGG 0.682360 tig0012394:-63237 Msa1351810:CDS
GTGTGCAAGCAAATACATGT+TGG 0.686516 tig0012394:-60375 Msa1351810:three_prime_UTR
TAGTGTGAAGCAACAACCGG+TGG 0.694277 tig0012394:-60516 Msa1351810:CDS
GCTAATGCTATGCATCACAT+CGG 0.697940 tig0012394:-59901 Msa1351810:three_prime_UTR
GCCATTGTCAGAGCAAACAG+AGG 0.710075 tig0012394:+62597 None:intergenic
CATACATTGTCATCAGTCAG+TGG 0.712438 tig0012394:-62806 Msa1351810:CDS
TTACACAGATGATTGATCTG+GGG 0.713496 tig0012394:+63766 None:intergenic
ATGACAGTACTATAGTTGTG+GGG 0.722246 tig0012394:-63979 Msa1351810:five_prime_UTR
TGGACTATGAGGATTCTGAG+TGG 0.766905 tig0012394:-62525 Msa1351810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTAGTGTTATTAAAT+AGG - tig0012394:60130-60149 Msa1351810:three_prime_UTR 10.0%
!!! ATTATTAGTGTTATTAAATA+GGG - tig0012394:60131-60150 Msa1351810:three_prime_UTR 10.0%
!! ATTTAATAACACAAATTTAA+AGG - tig0012394:63349-63368 Msa1351810:CDS 10.0%
!!! AAATGTTTTAATGATATATT+TGG + tig0012394:63554-63573 None:intergenic 10.0%
!! AAATTGTAAAAGAAGATTAA+TGG + tig0012394:59698-59717 None:intergenic 15.0%
!!! AGAATCTTTTAAAAAATCTA+CGG - tig0012394:61515-61534 Msa1351810:intron 15.0%
!!! ATTTTTTTTTGTTAACTTGT+AGG - tig0012394:61742-61761 Msa1351810:intron 15.0%
!!! TTATTTCTACTTTTCTTAAA+AGG + tig0012394:61904-61923 None:intergenic 15.0%
!! AAAACAAACTAAAATATATC+CGG + tig0012394:62174-62193 None:intergenic 15.0%
!!! TAGTTTGTTTTGATAAAATT+TGG - tig0012394:62183-62202 Msa1351810:intron 15.0%
!!! ATTTTTGTATCAAATCATAT+TGG - tig0012394:62207-62226 Msa1351810:intron 15.0%
!!! GTTTTTGTTTTATTTTGTTA+TGG - tig0012394:63614-63633 Msa1351810:CDS 15.0%
!!! ATGGATATAATATCTTTTTA+TGG + tig0012394:64064-64083 None:intergenic 15.0%
!!! TTCTTTTACAATTTTTTCCA+AGG - tig0012394:59704-59723 Msa1351810:three_prime_UTR 20.0%
!! TTGAGGATAAAATAAAGATT+CGG + tig0012394:59952-59971 None:intergenic 20.0%
!! GTTTGAATGAAATTATTACA+AGG - tig0012394:60704-60723 Msa1351810:intron 20.0%
!! AAGCAAAGAAAATTTATTTG+TGG + tig0012394:60869-60888 None:intergenic 20.0%
!!! AATCTAATTGATTCAAATGA+GGG + tig0012394:61048-61067 None:intergenic 20.0%
!!! AAATCTAATTGATTCAAATG+AGG + tig0012394:61049-61068 None:intergenic 20.0%
!! CATGTTTCATATTCAAATTT+AGG + tig0012394:62281-62300 None:intergenic 20.0%
!!! AATATTTTAGTTAGATGATG+TGG + tig0012394:62398-62417 None:intergenic 20.0%
!! TAAAGATCTTACACTAATAA+TGG - tig0012394:62486-62505 Msa1351810:intron 20.0%
!! AAAGATCTTACACTAATAAT+GGG - tig0012394:62487-62506 Msa1351810:intron 20.0%
!!! TTTTTGACTTGATATTTCTT+AGG - tig0012394:62561-62580 Msa1351810:CDS 20.0%
!! ATTGAAGGAAAATTGTAAAA+GGG + tig0012394:62666-62685 None:intergenic 20.0%
!!! TTTGAGACTAAAAAATATGT+AGG - tig0012394:63383-63402 Msa1351810:CDS 20.0%
!!! CTTTTATCTGAAAATTGTAT+TGG + tig0012394:63458-63477 None:intergenic 20.0%
!! AATACAAAAGAACAATTTAG+TGG + tig0012394:63516-63535 None:intergenic 20.0%
!! CATATATCTATGTTACAAAA+TGG - tig0012394:64153-64172 Msa1351810:five_prime_UTR 20.0%
!! AGCAAATTACATTATATCAA+AGG + tig0012394:64427-64446 None:intergenic 20.0%
!! TGATTCAACAAAAACATTAA+AGG + tig0012394:64490-64509 None:intergenic 20.0%
!! TAAATTGGAAGAAAAAAAAG+AGG + tig0012394:64517-64536 None:intergenic 20.0%
! ACACAATTTCTAACACTAAT+GGG + tig0012394:60424-60443 None:intergenic 25.0%
! TACACAATTTCTAACACTAA+TGG + tig0012394:60425-60444 None:intergenic 25.0%
! ATGCTAATGAAACAAATACA+AGG - tig0012394:60653-60672 Msa1351810:intron 25.0%
! AATGAAACAAATACAAGGAT+AGG - tig0012394:60658-60677 Msa1351810:intron 25.0%
! AAGTTTGAGGATTTAGATAA+CGG - tig0012394:60682-60701 Msa1351810:intron 25.0%
!!! AATTGAAGATTTTGATACCT+CGG - tig0012394:60966-60985 Msa1351810:CDS 25.0%
! TCAATTAGATTTAGAGAATC+AGG - tig0012394:61057-61076 Msa1351810:CDS 25.0%
! TTAGGTGAGAATAATACAAA+AGG - tig0012394:61081-61100 Msa1351810:CDS 25.0%
! AAAATGGGTGAAATTCATTA+CGG + tig0012394:61163-61182 None:intergenic 25.0%
!! TCATCAAAAGTTGATTTAAG+TGG - tig0012394:61303-61322 Msa1351810:CDS 25.0%
!! AAATTTGAAGCGAAAAAATC+TGG - tig0012394:61608-61627 Msa1351810:intron 25.0%
! CACAAGATAATTCAAGAAAT+AGG + tig0012394:61687-61706 None:intergenic 25.0%
! ACATAAATCACAAGCAATAT+TGG + tig0012394:61956-61975 None:intergenic 25.0%
! TACATTATCAGTTAACCATA+TGG + tig0012394:62460-62479 None:intergenic 25.0%
! AAGATCTTACACTAATAATG+GGG - tig0012394:62488-62507 Msa1351810:intron 25.0%
! GATTGAAGGAAAATTGTAAA+AGG + tig0012394:62667-62686 None:intergenic 25.0%
! TGTGAAATATCAAAATTCGA+AGG + tig0012394:62689-62708 None:intergenic 25.0%
! GAAAAAACATCACGTTATAA+TGG + tig0012394:62723-62742 None:intergenic 25.0%
! ACAAGTTATGCTTAAAAACA+AGG - tig0012394:63163-63182 Msa1351810:CDS 25.0%
! CCGACAATACTTAAAATAAA+CGG + tig0012394:63315-63334 None:intergenic 25.0%
!!! CCGTTTATTTTAAGTATTGT+CGG - tig0012394:63312-63331 Msa1351810:CDS 25.0%
!!! ATTTTAAGTATTGTCGGTTT+TGG - tig0012394:63318-63337 Msa1351810:CDS 25.0%
!!! TTTTAAGTATTGTCGGTTTT+GGG - tig0012394:63319-63338 Msa1351810:CDS 25.0%
!! TTTCATTTCCTAGATTTTTC+TGG - tig0012394:63571-63590 Msa1351810:CDS 25.0%
!!! TTGGTTTTGATTTGAAGTTT+AGG - tig0012394:63797-63816 Msa1351810:CDS 25.0%
!!! TAATTTTGTTTGCATGCAAA+GGG + tig0012394:64197-64216 None:intergenic 25.0%
!!! TTAATTTTGTTTGCATGCAA+AGG + tig0012394:64198-64217 None:intergenic 25.0%
TAGAAAGAGAGAATAGATTC+AGG + tig0012394:59652-59671 None:intergenic 30.0%
! ACTTGTTACGAAATTAACCT+TGG + tig0012394:59724-59743 None:intergenic 30.0%
! ACTTGGACTAGAAAATTTGT+CGG - tig0012394:59781-59800 Msa1351810:three_prime_UTR 30.0%
TGCAATAATAGTGATTCTCT+CGG + tig0012394:59875-59894 None:intergenic 30.0%
AGAATCACTATTATTGCATG+TGG - tig0012394:59877-59896 Msa1351810:three_prime_UTR 30.0%
CTAAGTAAAGTAAACACTTG+AGG + tig0012394:59969-59988 None:intergenic 30.0%
! TAGTGTTATTAAATAGGGAC+CGG - tig0012394:60136-60155 Msa1351810:three_prime_UTR 30.0%
TCAATGTAGCGTATTTATGT+TGG - tig0012394:60245-60264 Msa1351810:three_prime_UTR 30.0%
!! CAACTTTTTCTTTAGACATG+TGG + tig0012394:60340-60359 None:intergenic 30.0%
ACAATTTCTAACACTAATGG+GGG + tig0012394:60422-60441 None:intergenic 30.0%
CACAATTTCTAACACTAATG+GGG + tig0012394:60423-60442 None:intergenic 30.0%
AACTCAAACAAATCGTTTCT+GGG + tig0012394:60523-60542 None:intergenic 30.0%
AAGGGTCATGATAAATATTC+AGG - tig0012394:60625-60644 Msa1351810:intron 30.0%
TTTAGTGACTCTCATAAACA+AGG - tig0012394:60916-60935 Msa1351810:intron 30.0%
!! ATTGAAGATTTTGATACCTC+GGG - tig0012394:60967-60986 Msa1351810:CDS 30.0%
AGATTTAGAGAATCAGGTTT+AGG - tig0012394:61063-61082 Msa1351810:CDS 30.0%
AAAGCTAATCTTCAGAACAT+TGG - tig0012394:61204-61223 Msa1351810:CDS 30.0%
! GTGTTTTTCTCAAGAGATTT+CGG + tig0012394:61405-61424 None:intergenic 30.0%
ATTGGAAGTTTGATCAACTT+TGG + tig0012394:61463-61482 None:intergenic 30.0%
!! GATTTTGAAGATGAATCGAT+TGG - tig0012394:61764-61783 Msa1351810:intron 30.0%
!! CTTTTCTTAAAAGGCACAAA+TGG + tig0012394:61895-61914 None:intergenic 30.0%
!!! TGACCTTTTTTTCTTTCTTC+AGG - tig0012394:62075-62094 Msa1351810:intron 30.0%
GAACCTGAAGAAAGAAAAAA+AGG + tig0012394:62081-62100 None:intergenic 30.0%
!! ATAGAATGTTGATTCTCACT+TGG - tig0012394:62134-62153 Msa1351810:CDS 30.0%
! CTTGGAATTTAAGATTTGAC+CGG - tig0012394:62152-62171 Msa1351810:intron 30.0%
! AATATTCTTTTCTCGAGAGT+TGG - tig0012394:62432-62451 Msa1351810:intron 30.0%
! TTGACTTGATATTTCTTAGG+CGG - tig0012394:62564-62583 Msa1351810:CDS 30.0%
ATCAAAATTCGAAGGATTGA+AGG + tig0012394:62681-62700 None:intergenic 30.0%
! TTTTACGCAGATTATGACAA+TGG - tig0012394:62749-62768 Msa1351810:CDS 30.0%
TTTACGCAGATTATGACAAT+GGG - tig0012394:62750-62769 Msa1351810:CDS 30.0%
TAAGAAAACATTGAAGCACA+TGG + tig0012394:63017-63036 None:intergenic 30.0%
! ATTGGATCCTTTAACTTAGA+GGG + tig0012394:63128-63147 None:intergenic 30.0%
AACAAATCAAATGTCTATCC+AGG - tig0012394:63196-63215 Msa1351810:CDS 30.0%
ATAAGACTTTGTCAAGAACA+AGG + tig0012394:63425-63444 None:intergenic 30.0%
ATGACTTACCAGAAAAATCT+AGG + tig0012394:63582-63601 None:intergenic 30.0%
AGGAAACTTAAAAGTCATTG+AGG - tig0012394:63935-63954 Msa1351810:five_prime_UTR 30.0%
AACTTAAAAGTCATTGAGGT+TGG - tig0012394:63939-63958 Msa1351810:five_prime_UTR 30.0%
ACTTAAAAGTCATTGAGGTT+GGG - tig0012394:63940-63959 Msa1351810:five_prime_UTR 30.0%
CAATTTGGCAAGTCAAAAAT+TGG + tig0012394:63969-63988 None:intergenic 30.0%
CAAAGAATCTGAATACATGT+TGG + tig0012394:64095-64114 None:intergenic 30.0%
CAACATGTATTCAGATTCTT+TGG - tig0012394:64093-64112 Msa1351810:five_prime_UTR 30.0%
!! AATTTTGTTTGCATGCAAAG+GGG + tig0012394:64196-64215 None:intergenic 30.0%
! GAAAGCATGTTACTAAATTC+CGG - tig0012394:64282-64301 Msa1351810:five_prime_UTR 30.0%
AAAGCATGTTACTAAATTCC+GGG - tig0012394:64283-64302 Msa1351810:five_prime_UTR 30.0%
AAGACAGAGAATTCTATCAT+CGG + tig0012394:64387-64406 None:intergenic 30.0%
CCATAGAAACAAACAGAACT+CGG - tig0012394:59901-59920 Msa1351810:three_prime_UTR 35.0%
! CAAATTCGTTGTTGCTTGTT+AGG + tig0012394:60070-60089 None:intergenic 35.0%
CTAACAAGCAACAACGAATT+TGG - tig0012394:60068-60087 Msa1351810:three_prime_UTR 35.0%
TCATGACAGTACTATAGTTG+TGG - tig0012394:60172-60191 Msa1351810:three_prime_UTR 35.0%
CATGACAGTACTATAGTTGT+GGG - tig0012394:60173-60192 Msa1351810:three_prime_UTR 35.0%
ATGACAGTACTATAGTTGTG+GGG - tig0012394:60174-60193 Msa1351810:three_prime_UTR 35.0%
TTACACAGATGATTGATCTG+GGG + tig0012394:60390-60409 None:intergenic 35.0%
CTTACACAGATGATTGATCT+GGG + tig0012394:60391-60410 None:intergenic 35.0%
ACTTACACAGATGATTGATC+TGG + tig0012394:60392-60411 None:intergenic 35.0%
CAACTCAAACAAATCGTTTC+TGG + tig0012394:60524-60543 None:intergenic 35.0%
! CAGAAACGATTTGTTTGAGT+TGG - tig0012394:60522-60541 Msa1351810:intron 35.0%
!! ACGATTTGTTTGAGTTGGTT+TGG - tig0012394:60527-60546 Msa1351810:intron 35.0%
!! AATGACCAGATTTTAGTGCA+TGG - tig0012394:60553-60572 Msa1351810:intron 35.0%
ATTGACCATGCACTAAAATC+TGG + tig0012394:60561-60580 None:intergenic 35.0%
AGTCCATCTCATACTCTTAA+GGG - tig0012394:60607-60626 Msa1351810:intron 35.0%
TACAAGGATAGGAAAGTTTG+AGG - tig0012394:60669-60688 Msa1351810:intron 35.0%
! TCATCTTGACTTGAAGAAAC+AGG + tig0012394:60730-60749 None:intergenic 35.0%
CACTATTTACATCGTAGTTC+TGG - tig0012394:60799-60818 Msa1351810:intron 35.0%
GGTTTCTTACATGAACTATC+TGG - tig0012394:60820-60839 Msa1351810:intron 35.0%
! TAAACAAGGTATCCTTTCCA+AGG - tig0012394:60930-60949 Msa1351810:intron 35.0%
! AAACAAGGTATCCTTTCCAA+GGG - tig0012394:60931-60950 Msa1351810:intron 35.0%
TGACATTTATGCAACAACGA+CGG + tig0012394:61024-61043 None:intergenic 35.0%
!! TCAACTTTTGATGATTCGCA+AGG + tig0012394:61297-61316 None:intergenic 35.0%
! CAATGTATGGCTGAACTTTT+TGG + tig0012394:61336-61355 None:intergenic 35.0%
CAAACTTCCAATCAAGTTCT+TGG - tig0012394:61471-61490 Msa1351810:intron 35.0%
CTTGAATTATCTTGTGAGTG+TGG - tig0012394:61691-61710 Msa1351810:intron 35.0%
GGTGTTAAAAGAACTGATCA+TGG - tig0012394:61785-61804 Msa1351810:intron 35.0%
TTCAGATAGATTGTGCACTT+CGG + tig0012394:61846-61865 None:intergenic 35.0%
AAGTGCACAATCTATCTGAA+AGG - tig0012394:61846-61865 Msa1351810:intron 35.0%
AGTGCACAATCTATCTGAAA+GGG - tig0012394:61847-61866 Msa1351810:intron 35.0%
!!! ACTGAAGCTCAAGTTTTGTT+TGG - tig0012394:62244-62263 Msa1351810:intron 35.0%
!!! AAGCTCAAGTTTTGTTTGGA+TGG - tig0012394:62248-62267 Msa1351810:intron 35.0%
!! GCTATTTCTGTTGTGTGAAT+GGG + tig0012394:62308-62327 None:intergenic 35.0%
!! TGCTATTTCTGTTGTGTGAA+TGG + tig0012394:62309-62328 None:intergenic 35.0%
GAGAAATCTAGCATAGAAAC+AGG + tig0012394:62527-62546 None:intergenic 35.0%
AGAGAAAGAATACTTGCAGT+TGG + tig0012394:62642-62661 None:intergenic 35.0%
ATTATGACAATGGGAAGTCA+TGG - tig0012394:62759-62778 Msa1351810:CDS 35.0%
AGACCAAATCCTCAATTGTT+TGG - tig0012394:62957-62976 Msa1351810:CDS 35.0%
GACCAAATCCTCAATTGTTT+GGG - tig0012394:62958-62977 Msa1351810:CDS 35.0%
! GCTTCAATGTTTTCTTATCC+CGG - tig0012394:63020-63039 Msa1351810:CDS 35.0%
GCTGTAGAATTAAATGCTAG+TGG - tig0012394:63065-63084 Msa1351810:CDS 35.0%
! CATTGGATCCTTTAACTTAG+AGG + tig0012394:63129-63148 None:intergenic 35.0%
TGTGAGTTCACATTTGACAT+TGG + tig0012394:63146-63165 None:intergenic 35.0%
CATATGCACAAAAGTAGACA+AGG + tig0012394:63258-63277 None:intergenic 35.0%
ACTTAAAATAAACGGTTCCG+TGG + tig0012394:63307-63326 None:intergenic 35.0%
! TCTTGACAAAGTCTTATGAC+AGG - tig0012394:63428-63447 Msa1351810:CDS 35.0%
! CTTGACAAAGTCTTATGACA+GGG - tig0012394:63429-63448 Msa1351810:CDS 35.0%
!! TTTTGATTGTTCAAGTCCAC+CGG + tig0012394:63656-63675 None:intergenic 35.0%
TGGACTTGAACAATCAAAAG+TGG - tig0012394:63657-63676 Msa1351810:intron 35.0%
TTAAGTTTCCTCTTGTACTC+TGG + tig0012394:63926-63945 None:intergenic 35.0%
CATAGCATTAGCATACTTGT+TGG + tig0012394:64244-64263 None:intergenic 35.0%
TGATAGACTTAACAAGTTCC+CGG + tig0012394:64304-64323 None:intergenic 35.0%
ACCATCTCATAAACGAAAGA+CGG + tig0012394:64352-64371 None:intergenic 35.0%
AACATTAAAGGACCTTCCTA+AGG + tig0012394:64478-64497 None:intergenic 35.0%
GTTACGTTACGCAAGAAACT+TGG - tig0012394:59764-59783 Msa1351810:three_prime_UTR 40.0%
!! CCGAGTTCTGTTTGTTTCTA+TGG + tig0012394:59904-59923 None:intergenic 40.0%
TCATGACCTATGTGACAAAC+CGG + tig0012394:60158-60177 None:intergenic 40.0%
!!! TGGACTCGTTTTAGCTCTAT+TGG + tig0012394:60593-60612 None:intergenic 40.0%
GAGTCCATCTCATACTCTTA+AGG - tig0012394:60606-60625 Msa1351810:intron 40.0%
! TGACCCTTAAGAGTATGAGA+TGG + tig0012394:60613-60632 None:intergenic 40.0%
!! ATTTGATGACGATGATGCCT+TGG - tig0012394:60752-60771 Msa1351810:intron 40.0%
TCCATTGCACAATTCAACCA+AGG + tig0012394:60772-60791 None:intergenic 40.0%
AATTGCAAGTGAAGAACCCT+TGG + tig0012394:60950-60969 None:intergenic 40.0%
CGACGGCATATTTAACTGAT+TGG + tig0012394:61007-61026 None:intergenic 40.0%
TTTCTTCACAATGTGCATGC+TGG + tig0012394:61116-61135 None:intergenic 40.0%
TCATTACGGTTGAGGAAGAT+GGG + tig0012394:61149-61168 None:intergenic 40.0%
TTCATTACGGTTGAGGAAGA+TGG + tig0012394:61150-61169 None:intergenic 40.0%
GGTGAAATTCATTACGGTTG+AGG + tig0012394:61157-61176 None:intergenic 40.0%
AACAAAGATGCAGCTGTGAT+AGG - tig0012394:61264-61283 Msa1351810:CDS 40.0%
! CACTGACTGATGACAATGTA+TGG + tig0012394:61349-61368 None:intergenic 40.0%
CATACATTGTCATCAGTCAG+TGG - tig0012394:61347-61366 Msa1351810:CDS 40.0%
CAAAGGTTTCAAATCAACCC+TGG + tig0012394:61379-61398 None:intergenic 40.0%
!! CAGGGTTGATTTGAAACCTT+TGG - tig0012394:61377-61396 Msa1351810:CDS 40.0%
GATACATCTTCTTTGCAAGC+AGG + tig0012394:61441-61460 None:intergenic 40.0%
ACTCTCACCAAGAACTTGAT+TGG + tig0012394:61481-61500 None:intergenic 40.0%
GCGAAAAAATCTGGACTATG+AGG - tig0012394:61617-61636 Msa1351810:intron 40.0%
AAAAGAACTGATCATGGACG+AGG - tig0012394:61791-61810 Msa1351810:intron 40.0%
ACTCATACCGAATTGCAACA+AGG - tig0012394:62051-62070 Msa1351810:intron 40.0%
AGGTCAACCTTGTTGCAATT+CGG + tig0012394:62061-62080 None:intergenic 40.0%
TAAAGCTTCAATGCTGGATG+AGG - tig0012394:62588-62607 Msa1351810:CDS 40.0%
ATTTGCATGGCAACACTCAT+GGG + tig0012394:62855-62874 None:intergenic 40.0%
! ATGAGTGTTGCCATGCAAAT+GGG - tig0012394:62855-62874 Msa1351810:CDS 40.0%
AGGTGAGTTCCTTGAAATTG+AGG + tig0012394:62891-62910 None:intergenic 40.0%
AGCCCAAACAATTGAGGATT+TGG + tig0012394:62963-62982 None:intergenic 40.0%
AACATTGAAGCACATGGCAT+TGG + tig0012394:63011-63030 None:intergenic 40.0%
ACAGCTGATGAGTTCATAAC+AGG + tig0012394:63050-63069 None:intergenic 40.0%
TTAAATGCTAGTGGAACAGC+AGG - tig0012394:63074-63093 Msa1351810:CDS 40.0%
ACTAATGGAAACCGTGGAAT+CGG - tig0012394:63097-63116 Msa1351810:CDS 40.0%
TCTCAAGAAGCAAACAAACC+TGG + tig0012394:63217-63236 None:intergenic 40.0%
TATATCTGACCTCAAGTCCA+CGG - tig0012394:63287-63306 Msa1351810:CDS 40.0%
!! GTCATTTTCCAGCAAAGCAT+GGG + tig0012394:63695-63714 None:intergenic 40.0%
!!! TGTCATTTTCCAGCAAAGCA+TGG + tig0012394:63696-63715 None:intergenic 40.0%
GTGTGCAAGCAAATACATGT+TGG - tig0012394:63778-63797 Msa1351810:CDS 40.0%
!! GAAGTTTAGGAGCGTCTTAT+TGG - tig0012394:63810-63829 Msa1351810:CDS 40.0%
TAACGTTCAGTTGTACTTGC+AGG - tig0012394:63840-63859 Msa1351810:exon 40.0%
TTGCAGGTTATGACTCATTG+CGG - tig0012394:63856-63875 Msa1351810:exon 40.0%
GAAATTCTCCAGAGTACAAG+AGG - tig0012394:63915-63934 Msa1351810:five_prime_UTR 40.0%
!! TTTGACTTGCCAAATTGCAC+AGG - tig0012394:63972-63991 Msa1351810:five_prime_UTR 40.0%
! TTGCCAAATTGCACAGGTTT+TGG - tig0012394:63978-63997 Msa1351810:five_prime_UTR 40.0%
ATGCCAAAACCTGTGCAATT+TGG + tig0012394:63984-64003 None:intergenic 40.0%
ATACATGTTGGCAGGAAACA+TGG + tig0012394:64083-64102 None:intergenic 40.0%
GAATCTGAATACATGTTGGC+AGG + tig0012394:64091-64110 None:intergenic 40.0%
AAGTGATTCACATCACTGCA+AGG - tig0012394:64116-64135 Msa1351810:five_prime_UTR 40.0%
GCTAATGCTATGCATCACAT+CGG - tig0012394:64252-64271 Msa1351810:five_prime_UTR 40.0%
ACCGTCTTTCGTTTATGAGA+TGG - tig0012394:64348-64367 Msa1351810:five_prime_UTR 40.0%
! CTTTTGTGTTGCCTTCATTG+AGG - tig0012394:64449-64468 Msa1351810:five_prime_UTR 40.0%
TCCTAAGGAAACCTCAATGA+AGG + tig0012394:64463-64482 None:intergenic 40.0%
TCATTGAGGTTTCCTTAGGA+AGG - tig0012394:64463-64482 Msa1351810:five_prime_UTR 40.0%
! ATAGTTGTGGGGCTTGTTTC+AGG - tig0012394:60185-60204 Msa1351810:three_prime_UTR 45.0%
ATGTGGCATAACTCATGCAG+AGG + tig0012394:60323-60342 None:intergenic 45.0%
CGTATAACACTGTCCTTGTG+TGG - tig0012394:60486-60505 Msa1351810:CDS 45.0%
GCCTTGGTTGAATTGTGCAA+TGG - tig0012394:60768-60787 Msa1351810:intron 45.0%
GGCAGCAAAGTCATTTGTAG+TGG + tig0012394:60848-60867 None:intergenic 45.0%
CAAGTGAAGAACCCTTGGAA+AGG + tig0012394:60945-60964 None:intergenic 45.0%
! CACCCATTTTGCAAAACCTG+CGG - tig0012394:61173-61192 Msa1351810:CDS 45.0%
! AGCCGCAGGTTTTGCAAAAT+GGG + tig0012394:61178-61197 None:intergenic 45.0%
! TAGCCGCAGGTTTTGCAAAA+TGG + tig0012394:61179-61198 None:intergenic 45.0%
! TTAGCTTTCACAATAGCCGC+AGG + tig0012394:61192-61211 None:intergenic 45.0%
TTCATCAAGACCAGAACGTG+TGG - tig0012394:61233-61252 Msa1351810:CDS 45.0%
TCATCAAGACCAGAACGTGT+GGG - tig0012394:61234-61253 Msa1351810:CDS 45.0%
GGTTTCAAATCAACCCTGGA+TGG + tig0012394:61375-61394 None:intergenic 45.0%
TCAAGAGATTTCGGCTCCAA+AGG + tig0012394:61396-61415 None:intergenic 45.0%
TCCTCTGTTTGCTCTGACAA+TGG - tig0012394:61555-61574 Msa1351810:CDS 45.0%
TGGACTATGAGGATTCTGAG+TGG - tig0012394:61628-61647 Msa1351810:intron 45.0%
GAAGAGACAGGATCAATGAG+AGG - tig0012394:62011-62030 Msa1351810:intron 45.0%
! ATTCCTGCTGGTAACGTCAT+AGG + tig0012394:62795-62814 None:intergenic 45.0%
GCAACACTCATGGGTGAAAA+GGG + tig0012394:62846-62865 None:intergenic 45.0%
CATTTGCATGGCAACACTCA+TGG + tig0012394:62856-62875 None:intergenic 45.0%
! CATGAGTGTTGCCATGCAAA+TGG - tig0012394:62854-62873 Msa1351810:CDS 45.0%
! TGAGTGTTGCCATGCAAATG+GGG - tig0012394:62856-62875 Msa1351810:CDS 45.0%
CAGATGTATGTGCAACAGGA+AGG + tig0012394:62911-62930 None:intergenic 45.0%
CTTCCTGTTGCACATACATC+TGG - tig0012394:62909-62928 Msa1351810:CDS 45.0%
AGTCCAGATGTATGTGCAAC+AGG + tig0012394:62915-62934 None:intergenic 45.0%
!! TCTGGACTTGCTGCTTTACA+TGG - tig0012394:62927-62946 Msa1351810:CDS 45.0%
!! CTGGACTTGCTGCTTTACAT+GGG - tig0012394:62928-62947 Msa1351810:CDS 45.0%
!! ACTTGCTGCTTTACATGGGA+TGG - tig0012394:62932-62951 Msa1351810:CDS 45.0%
GCTTGAAGCCCAAACAATTG+AGG + tig0012394:62969-62988 None:intergenic 45.0%
CAATTGTTTGGGCTTCAAGC+TGG - tig0012394:62969-62988 Msa1351810:CDS 45.0%
TGAGTTCATAACAGGCTCTC+CGG + tig0012394:63042-63061 None:intergenic 45.0%
TAGTGGAACAGCAGGACTAA+TGG - tig0012394:63082-63101 Msa1351810:CDS 45.0%
GGCTTCACCCTCTAAGTTAA+AGG - tig0012394:63118-63137 Msa1351810:CDS 45.0%
!!! AAGTATTGTCGGTTTTGGGC+AGG - tig0012394:63323-63342 Msa1351810:CDS 45.0%
!!! AGTATTGTCGGTTTTGGGCA+GGG - tig0012394:63324-63343 Msa1351810:CDS 45.0%
! TGGTAGTGTGAAGCAACAAC+CGG - tig0012394:63634-63653 Msa1351810:CDS 45.0%
!! TGCACAGGTTTTGGCATCTT+TGG - tig0012394:63987-64006 Msa1351810:five_prime_UTR 45.0%
!! AGGTTTTGGCATCTTTGGAG+TGG - tig0012394:63992-64011 Msa1351810:five_prime_UTR 45.0%
GCCTTCATTGAGGTTTCCTT+AGG - tig0012394:64459-64478 Msa1351810:five_prime_UTR 45.0%
!! TAGGGACCGGTTTGTCACAT+AGG - tig0012394:60149-60168 Msa1351810:three_prime_UTR 50.0%
GGTCTGCATTGAACCACACA+AGG + tig0012394:60502-60521 None:intergenic 50.0%
!!! GGTGCTAGTTTTTAGTCCCG+AGG + tig0012394:60986-61005 None:intergenic 50.0%
TTCTTTGCTCCCACACGTTC+TGG + tig0012394:61246-61265 None:intergenic 50.0%
CTTGGTGAGAGTCGCAGAAA+AGG - tig0012394:61489-61508 Msa1351810:intron 50.0%
GCCATTGTCAGAGCAAACAG+AGG + tig0012394:61559-61578 None:intergenic 50.0%
! TGATCATGGACGAGGCGTTA+TGG - tig0012394:61799-61818 Msa1351810:intron 50.0%
! GATCATGGACGAGGCGTTAT+GGG - tig0012394:61800-61819 Msa1351810:intron 50.0%
TCATGCAGAGACGAAGAGAC+AGG - tig0012394:61999-62018 Msa1351810:intron 50.0%
TCTCGAGAGTTGGCACCATA+TGG - tig0012394:62442-62461 Msa1351810:intron 50.0%
GGCGGATAAAGCTTCAATGC+TGG - tig0012394:62582-62601 Msa1351810:CDS 50.0%
ATGCCTATGACGTTACCAGC+AGG - tig0012394:62789-62808 Msa1351810:CDS 50.0%
AGGAATGCAGCACATGCATG+CGG - tig0012394:62809-62828 Msa1351810:CDS 50.0%
GGCAACACTCATGGGTGAAA+AGG + tig0012394:62847-62866 None:intergenic 50.0%
TGTTGCCATGCAAATGGGGT+TGG - tig0012394:62860-62879 Msa1351810:CDS 50.0%
GTTGCCATGCAAATGGGGTT+GGG - tig0012394:62861-62880 Msa1351810:CDS 50.0%
TTGCCATGCAAATGGGGTTG+GGG - tig0012394:62862-62881 Msa1351810:CDS 50.0%
!! TTGGGGGTGCCTCAATTTCA+AGG - tig0012394:62879-62898 Msa1351810:CDS 50.0%
TTTGGGCTTCAAGCTGGTCA+GGG - tig0012394:62975-62994 Msa1351810:CDS 50.0%
GAGTTCATAACAGGCTCTCC+GGG + tig0012394:63041-63060 None:intergenic 50.0%
AGCAGGACTAATGGAAACCG+TGG - tig0012394:63091-63110 Msa1351810:CDS 50.0%
TAAACGGTTCCGTGGACTTG+AGG + tig0012394:63299-63318 None:intergenic 50.0%
!!! GTATTGTCGGTTTTGGGCAG+GGG - tig0012394:63325-63344 Msa1351810:CDS 50.0%
TAGTGTGAAGCAACAACCGG+TGG - tig0012394:63637-63656 Msa1351810:CDS 50.0%
ATCAGTCAGTGGAGCCATCC+AGG - tig0012394:61358-61377 Msa1351810:CDS 55.0%
TCAGTCAGTGGAGCCATCCA+GGG - tig0012394:61359-61378 Msa1351810:CDS 55.0%
TGCATGTGCTGCATTCCTGC+TGG + tig0012394:62807-62826 None:intergenic 55.0%
TGCCATGCAAATGGGGTTGG+GGG - tig0012394:62863-62882 Msa1351810:CDS 55.0%
GTTTGGGCTTCAAGCTGGTC+AGG - tig0012394:62974-62993 Msa1351810:CDS 55.0%
! AGAGGGTGAAGCCGATTCCA+CGG + tig0012394:63111-63130 None:intergenic 55.0%
CGATAGTGCCCATGCTTTGC+TGG - tig0012394:63684-63703 Msa1351810:intron 55.0%
! CATGCAAAGGGGTGTGCAGT+GGG + tig0012394:64185-64204 None:intergenic 55.0%
CACCCCCAACCCCATTTGCA+TGG + tig0012394:62868-62887 None:intergenic 60.0%
! GCATGCAAAGGGGTGTGCAG+TGG + tig0012394:64186-64205 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0012394 gene 59630 64545 59630 ID=Msa1351810;Name=Msa1351810
tig0012394 mRNA 59630 64545 59630 ID=Msa1351810-mRNA-1;Parent=Msa1351810;Name=Msa1351810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=687|0.83|0.85|1|1|1|7|792|687
tig0012394 exon 59630 60535 59630 ID=Msa1351810-mRNA-1:exon:7891;Parent=Msa1351810-mRNA-1
tig0012394 exon 60958 61416 60958 ID=Msa1351810-mRNA-1:exon:7890;Parent=Msa1351810-mRNA-1
tig0012394 exon 61527 61592 61527 ID=Msa1351810-mRNA-1:exon:7889;Parent=Msa1351810-mRNA-1
tig0012394 exon 62079 62168 62079 ID=Msa1351810-mRNA-1:exon:7888;Parent=Msa1351810-mRNA-1
tig0012394 exon 62307 62411 62307 ID=Msa1351810-mRNA-1:exon:7887;Parent=Msa1351810-mRNA-1
tig0012394 exon 62516 63656 62516 ID=Msa1351810-mRNA-1:exon:7886;Parent=Msa1351810-mRNA-1
tig0012394 exon 63770 64545 63770 ID=Msa1351810-mRNA-1:exon:7885;Parent=Msa1351810-mRNA-1
tig0012394 five_prime_UTR 63859 64545 63859 ID=Msa1351810-mRNA-1:five_prime_utr;Parent=Msa1351810-mRNA-1
tig0012394 CDS 63770 63858 63770 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 62516 63656 62516 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 62307 62411 62307 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 62079 62168 62079 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 61527 61592 61527 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 60958 61416 60958 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 CDS 60422 60535 60422 ID=Msa1351810-mRNA-1:cds;Parent=Msa1351810-mRNA-1
tig0012394 three_prime_UTR 59630 60421 59630 ID=Msa1351810-mRNA-1:three_prime_utr;Parent=Msa1351810-mRNA-1
Gene Sequence

>Msa1351810

ATGCCTCTGCATGAGTTATGCCACATGTCTAAAGAAAAAGTTGATCATAAAGAGATGAACAATTCTTGTACCCCAGATCAATCATCTGTACCCAGAAACGATTTGTTTGAGTTGGTTTGGCAAAATGACCAGATTTTAGTGCATGGTCAATCTAGTAATTCCAATAGAGCTAAAACGAGTCCATCTCATACTCTTAAGGGTCATGATAAATATTCAGGACAACATGCTAATGAAACAAATACAAGGATAGGAAAGTTTGAGGATTTAGATAACGGTTTGAATGAAATTATTACAAGGCCTGTTTCTTCAAGTCAAGATGAAGATTTGATGACGATGATGCCTTGGTTGAATTGTGCAATGGATGATGAACACTATTTACATCGTAGTTCTGGTTTCTTACATGAACTATCTGGTGCCACTACAAATGACTTTGCTGCCACAAATAAATTTTCTTTGCTTGATAGAAAAAGTAATTGTATTCAAGTATTTAGTGACTCTCATAAACAAGGTATCCTTTCCAAGGGTTCTTCACTTGCAATTGAAGATTTTGATACCTCGGGACTAAAAACTAGCACCAATCAGTTAAATATGCCGTCGTTGTTGCATAAATGTCAACCCTCATTTGAATCAATTAGATTTAGAGAATCAGGTTTAGGTGAGAATAATACAAAAGGTAATGCAAACCAGCATGCACATTGTGAAGAAATCTCTCATATCCCATCTTCCTCAACCGTAATGAATTTCACCCATTTTGCAAAACCTGCGGCTATTGTGAAAGCTAATCTTCAGAACATTGGTTTCTCTTCATCAAGACCAGAACGTGTGGGAGCAAAGAACAAAGATGCAGCTGTGATAGGAAGTAATCCTTGCGAATCATCAAAAGTTGATTTAAGTGGAGAATGTCCAAAAAGTTCAGCCATACATTGTCATCAGTCAGTGGAGCCATCCAGGGTTGATTTGAAACCTTTGGAGCCGAAATCTCTTGAGAAAAACACTAGTGTTTCTACTCCTGCTTGCAAAGAAGATGTATCCAAAGTTGATCAAACTTCCAATCAAGTTCTTGGTGAGAGTCGCAGAAAAGGTCAAGAATCTTTTAAAAAATCTACGGAGCTAACAGTAGTCTCTTCCTCTGTTTGCTCTGACAATGGCGCGTATAGAAGTTCAGATGATGCAAATCAAAATTTGAAGCGAAAAAATCTGGACTATGAGGATTCTGAGTGGCACAGTGAAGATTTTGAAGATGAATCGATTGGTGTTAAAAGAACTGATCATGGACGAGGCGTTATGGGCTCAAAGAAAAATCGTTCAGCCGAAGTGCACAATCTATCTGAAAGGAGACGAAGAGACAGGATCAATGAGAGGATGCGTGCATTGCAAGAACTCATACCGAATTGCAACAAGGTTGACCTTTTTTTCTTTCTTCAGGCGGATAAAGCTTCAATGCTGGATGAGGCAATTGAGTATCTTAAATCACTTCAACTCCAACTGCAAATTATGACAATGGGAAGTCATGGTTTATACATGCCTATGACGTTACCAGCAGGAATGCAGCACATGCATGCGGCTCACATGTTTCCCTTTTCACCCATGAGTGTTGCCATGCAAATGGGGTTGGGGGTGCCTCAATTTCAAGGAACTCACCTTCCTGTTGCACATACATCTGGACTTGCTGCTTTACATGGGATGGCAAGACCAAATCCTCAATTGTTTGGGCTTCAAGCTGGTCAGGGACTGCACATGCCAATGCCATGTGCTTCAATGTTTTCTTATCCCGGAGAGCCTGTTATGAACTCATCAGCTGTAGAATTAAATGCTAGTGGAACAGCAGGACTAATGGAAACCGTGGAATCGGCTTCACCCTCTAAGTTAAAGGATCCAATGTCAAATGTGAACTCACAAGTTATGCTTAAAAACAAGGAATGTAACTCAACAAATCAAATGTCTATCCAGTGTGAAGCAACAACCGGTGGACTTGAACAATCAAAAGTGGTACTCGATAGTGCCCATGCTTTGCTGGAAAATGACAAAAGAGACAACGTTGAGATTGATAAATCTCATGAGTAA
Protein sequence

>Msa1351810

MPLHELCHMSKEKVDHKEMNNSCTPDQSSVPRNDLFELVWQNDQILVHGQSSNSNRAKTSPSHTLKGHDKYSGQHANETNTRIGKFEDLDNGLNEIITRPVSSSQDEDLMTMMPWLNCAMDDEHYLHRSSGFLHELSGATTNDFAATNKFSLLDRKSNCIQVFSDSHKQGILSKGSSLAIEDFDTSGLKTSTNQLNMPSLLHKCQPSFESIRFRESGLGENNTKGNANQHAHCEEISHIPSSSTVMNFTHFAKPAAIVKANLQNIGFSSSRPERVGAKNKDAAVIGSNPCESSKVDLSGECPKSSAIHCHQSVEPSRVDLKPLEPKSLEKNTSVSTPACKEDVSKVDQTSNQVLGESRRKGQESFKKSTELTVVSSSVCSDNGAYRSSDDANQNLKRKNLDYEDSEWHSEDFEDESIGVKRTDHGRGVMGSKKNRSAEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFFLQADKASMLDEAIEYLKSLQLQLQIMTMGSHGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLGVPQFQGTHLPVAHTSGLAALHGMARPNPQLFGLQAGQGLHMPMPCASMFSYPGEPVMNSSAVELNASGTAGLMETVESASPSKLKDPMSNVNSQVMLKNKECNSTNQMSIQCEATTGGLEQSKVVLDSAHALLENDKRDNVEIDKSHE*