AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040280 MtrunA17_Chr7g0271251 90.714 700 44 5 1 688 1 691 0.0 1265
Msa1040280 MtrunA17_Chr1g0193321 47.510 743 289 18 2 676 1 710 0.0 575
Msa1040280 MtrunA17_Chr1g0182791 41.981 212 81 6 371 552 260 459 2.16e-34 138
Msa1040280 MtrunA17_Chr7g0262691 40.541 222 89 8 370 559 189 399 3.44e-32 130
Msa1040280 MtrunA17_Chr3g0095391 35.806 310 135 11 243 544 148 401 2.19e-31 128
Msa1040280 MtrunA17_Chr7g0270871 49.655 145 53 6 377 515 152 282 1.34e-27 115
Msa1040280 MtrunA17_Chr1g0153241 52.577 97 35 2 431 527 86 171 2.33e-22 97.4
Msa1040280 MtrunA17_Chr5g0402031 53.398 103 32 4 439 540 114 201 3.21e-21 95.9
Msa1040280 MtrunA17_Chr7g0231461 41.667 108 54 2 394 500 260 359 1.18e-17 86.7
Msa1040280 MtrunA17_Chr4g0074161 44.048 84 36 2 432 512 208 283 1.36e-15 79.7
Msa1040280 MtrunA17_Chr1g0190731 42.667 75 35 1 432 506 195 261 1.22e-13 73.2
Msa1040280 MtrunA17_Chr1g0152131 45.070 71 32 1 432 502 262 325 2.51e-13 72.8
Msa1040280 MtrunA17_Chr4g0035101 36.036 111 62 2 392 502 107 208 3.69e-13 71.2
Msa1040280 MtrunA17_Chr5g0393721 31.304 115 67 2 428 542 222 324 1.06e-12 69.7
Msa1040280 MtrunA17_Chr3g0144641 39.759 83 41 2 420 502 183 256 1.09e-12 70.5
Msa1040280 MtrunA17_Chr8g0363921 42.254 71 34 1 432 502 153 216 1.19e-12 68.9
Msa1040280 MtrunA17_Chr5g0415291 38.298 94 47 2 409 502 95 177 1.41e-12 68.2
Msa1040280 MtrunA17_Chr1g0207311 38.095 84 39 2 433 511 194 269 2.36e-12 68.2
Msa1040280 MtrunA17_Chr7g0234761 43.662 71 33 1 432 502 319 382 3.23e-12 69.7
Msa1040280 MtrunA17_Chr8g0339091 43.662 71 33 1 432 502 293 356 4.19e-12 68.9
Msa1040280 MtrunA17_Chr1g0207301 39.706 68 33 1 446 513 304 363 4.70e-12 68.2
Msa1040280 MtrunA17_Chr8g0365941 43.662 71 33 1 432 502 307 370 4.79e-12 68.9
Msa1040280 MtrunA17_Chr5g0421111 43.662 71 33 1 432 502 367 430 4.83e-12 68.9
Msa1040280 MtrunA17_Chr3g0134741 40.845 71 34 1 443 513 242 304 8.73e-12 67.0
Msa1040280 MtrunA17_Chr3g0131771 42.254 71 34 1 432 502 149 212 1.62e-11 66.2
Msa1040280 MtrunA17_Chr1g0152651 42.029 69 32 1 443 511 287 347 3.38e-11 65.5
Msa1040280 MtrunA17_Chr8g0385911 35.714 84 47 1 419 502 134 210 8.20e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040280 AT1G09530.3 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT1G09530.2 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT1G09530.5 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT1G09530.1 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT1G09530.4 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT1G09530.6 31.826 597 272 21 2 587 1 473 5.30e-47 174
Msa1040280 AT2G46970.2 36.531 271 132 11 368 628 130 370 1.69e-29 121
Msa1040280 AT2G46970.3 36.531 271 132 11 368 628 139 379 2.01e-29 121
Msa1040280 AT2G46970.1 36.531 271 132 11 368 628 161 401 2.49e-29 121
Msa1040280 AT2G20180.7 38.863 211 90 8 356 544 138 331 9.50e-28 116
Msa1040280 AT2G20180.1 38.863 211 90 8 356 544 138 331 9.50e-28 116
Msa1040280 AT2G20180.5 38.863 211 90 8 356 544 138 331 9.50e-28 116
Msa1040280 AT2G20180.4 38.863 211 90 8 356 544 209 402 3.53e-27 116
Msa1040280 AT2G20180.6 38.863 211 90 8 356 544 209 402 3.53e-27 116
Msa1040280 AT2G20180.2 38.863 211 90 8 356 544 209 402 3.53e-27 116
Msa1040280 AT2G20180.3 38.863 211 90 8 356 544 209 402 3.53e-27 116
Msa1040280 AT2G20180.8 47.328 131 50 3 371 499 226 339 1.58e-24 105
Msa1040280 AT4G28800.1 41.935 155 66 7 423 571 242 378 6.11e-23 102
Msa1040280 AT4G36930.1 60.714 84 25 1 436 519 197 272 1.45e-21 97.8
Msa1040280 AT4G28800.2 40.645 155 62 7 423 571 254 384 1.82e-20 95.5
Msa1040280 AT5G67110.1 59.036 83 24 3 433 514 90 163 1.82e-20 90.9
Msa1040280 AT4G28790.1 40.146 137 62 4 414 540 255 381 2.28e-20 94.7
Msa1040280 AT4G28815.2 44.860 107 47 3 420 525 58 153 2.41e-20 90.9
Msa1040280 AT4G28815.1 44.860 107 47 3 420 525 134 229 8.28e-20 91.3
Msa1040280 AT3G59060.3 42.604 169 65 6 414 575 237 380 1.16e-19 92.8
Msa1040280 AT3G59060.2 42.604 169 65 6 414 575 237 380 1.16e-19 92.8
Msa1040280 AT3G59060.4 42.604 169 65 6 414 575 237 380 1.16e-19 92.8
Msa1040280 AT3G59060.1 45.695 151 53 5 432 575 252 380 1.16e-19 92.8
Msa1040280 AT4G00050.2 45.714 105 39 3 401 501 78 168 8.77e-19 88.2
Msa1040280 AT4G00050.1 45.714 105 39 3 401 501 180 270 2.39e-18 88.2
Msa1040280 AT4G00050.3 45.714 105 39 3 401 501 180 270 2.99e-18 87.8
Msa1040280 AT2G43010.2 72.059 68 11 1 433 500 254 313 1.63e-17 86.3
Msa1040280 AT2G43010.1 72.059 68 11 1 433 500 254 313 1.76e-17 85.9
Msa1040280 AT2G43010.4 72.059 68 11 1 433 500 254 313 2.06e-17 85.5
Msa1040280 AT2G43010.3 72.059 68 11 1 433 500 261 320 2.19e-17 85.9
Msa1040280 AT2G43010.5 72.059 68 11 1 433 500 296 355 3.13e-17 85.5
Msa1040280 AT2G24260.2 48.000 75 31 1 432 506 37 103 2.64e-16 79.7
Msa1040280 AT4G28790.2 52.632 76 28 1 423 498 264 331 2.87e-16 81.3
Msa1040280 AT3G62090.1 39.370 127 58 3 433 557 168 277 5.41e-16 80.5
Msa1040280 AT2G24260.1 49.296 71 28 1 432 502 140 202 8.58e-16 80.1
Msa1040280 AT3G62090.2 39.370 127 58 3 433 557 185 294 8.71e-16 80.1
Msa1040280 AT5G58010.1 46.667 75 32 1 432 506 101 167 1.46e-15 78.6
Msa1040280 AT4G30980.1 46.667 75 32 1 432 506 132 198 1.61e-15 78.6
Msa1040280 AT4G30980.2 46.667 75 32 1 432 506 180 246 3.87e-15 78.2
Msa1040280 AT1G68920.3 28.972 214 129 6 291 502 175 367 1.30e-13 74.3
Msa1040280 AT3G23690.1 31.944 144 83 4 362 502 125 256 2.16e-13 72.8
Msa1040280 AT1G10120.2 45.205 73 33 1 430 502 206 271 2.43e-13 72.8
Msa1040280 AT1G10120.1 45.205 73 33 1 430 502 206 271 2.43e-13 72.8
Msa1040280 AT5G50915.3 29.143 175 89 6 342 502 48 201 6.79e-13 70.1
Msa1040280 AT5G50915.4 29.143 175 89 6 342 502 48 201 6.79e-13 70.1
Msa1040280 AT5G50915.1 29.143 175 89 6 342 502 48 201 1.06e-12 69.7
Msa1040280 AT5G50915.2 29.143 175 89 6 342 502 48 201 1.06e-12 69.7
Msa1040280 AT1G68920.1 28.037 214 132 5 291 502 175 368 1.17e-12 71.2
Msa1040280 AT1G68920.4 28.037 214 132 5 291 502 175 368 1.17e-12 71.2
Msa1040280 AT1G68920.2 28.037 214 132 5 291 502 175 368 1.17e-12 71.2
Msa1040280 AT1G59640.1 42.254 71 34 1 432 502 138 201 2.80e-12 68.2
Msa1040280 AT3G07340.2 43.662 71 33 1 432 502 260 323 3.25e-12 69.7
Msa1040280 AT1G27740.1 31.707 123 70 3 400 519 140 251 3.32e-12 67.8
Msa1040280 AT1G26260.5 42.466 73 35 1 430 502 201 266 3.54e-12 68.9
Msa1040280 AT1G26260.3 42.466 73 35 1 430 502 172 237 3.65e-12 68.9
Msa1040280 AT3G07340.1 43.662 71 33 1 432 502 260 323 3.70e-12 69.7
Msa1040280 AT5G48560.2 43.662 71 33 1 432 502 303 366 3.80e-12 69.7
Msa1040280 AT1G26260.4 42.466 73 35 1 430 502 223 288 4.51e-12 68.9
Msa1040280 AT1G26260.1 42.466 73 35 1 430 502 223 288 4.51e-12 68.9
Msa1040280 AT1G26260.6 42.466 73 35 1 430 502 223 288 4.51e-12 68.9
Msa1040280 AT1G26260.2 42.466 73 35 1 430 502 223 288 4.51e-12 68.9
Msa1040280 AT5G48560.1 43.662 71 33 1 432 502 303 366 4.52e-12 69.3
Msa1040280 AT2G14760.1 36.905 84 45 1 428 511 235 310 6.36e-12 67.8
Msa1040280 AT4G33880.1 42.254 71 33 1 443 513 279 341 7.85e-12 67.8
Msa1040280 AT2G14760.3 41.096 73 35 1 439 511 259 323 9.94e-12 67.4
Msa1040280 AT4G34530.1 39.437 71 36 1 432 502 174 237 1.03e-11 67.4
Msa1040280 AT1G59640.2 42.254 71 34 1 432 502 138 201 1.21e-11 67.0
Msa1040280 AT5G62610.2 40.845 71 35 1 432 502 155 218 1.51e-11 66.2
Msa1040280 AT5G62610.1 40.845 71 35 1 432 502 155 218 1.51e-11 66.2
Msa1040280 AT4G28811.1 51.136 88 34 2 415 501 335 414 1.52e-11 67.8
Msa1040280 AT5G43175.1 35.484 93 47 3 432 519 132 216 1.63e-11 65.1
Msa1040280 AT4G36540.2 39.437 71 36 1 432 502 143 206 4.96e-11 64.7
Msa1040280 AT4G36540.1 39.437 71 36 1 432 502 143 206 5.10e-11 64.7
Msa1040280 AT5G61270.2 43.860 114 50 5 402 514 47 147 8.57e-11 63.9
Msa1040280 AT5G61270.3 43.860 114 50 5 402 514 47 147 8.57e-11 63.9

Find 188 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGTTGTGGGGCTTGTTTC+AGG 0.130485 7_1:+77625660 Msa1040280:five_prime_UTR
AATTATTAGTGTTATTAAAT+AGG 0.179149 7_1:+77625605 Msa1040280:five_prime_UTR
CAACTCAAACAAATCGTTTC+TGG 0.187942 7_1:-77625996 None:intergenic
CAAATTCGTTGTTGCTTGTT+AGG 0.202154 7_1:-77625542 None:intergenic
CCGAGTTCTATTTGTTTCTA+TGG 0.202530 7_1:-77625376 None:intergenic
AGAAACATTGGCATCTAAAT+TGG 0.237157 7_1:-77629985 None:intergenic
CTAACAAGCAACAACGAATT+TGG 0.243187 7_1:+77625543 Msa1040280:five_prime_UTR
TTGCCAAATTGCACAGGTTT+TGG 0.249470 7_1:+77629434 Msa1040280:three_prime_UTR
CAAACTTCCAATCAAGTTCT+TGG 0.266868 7_1:+77626946 Msa1040280:CDS
AGCCCAAACAATTGAGGATT+TGG 0.271198 7_1:-77628433 None:intergenic
TTCTTTGCTCCCACACGTTC+TGG 0.281144 7_1:-77626718 None:intergenic
AAATTGTAAAAGAAGATTAA+TGG 0.290810 7_1:-77625173 None:intergenic
GGCTTCACCCTCTAAGTTAA+AGG 0.292607 7_1:+77628591 Msa1040280:CDS
TCAATTAGATTTAGAGAATC+AGG 0.292631 7_1:+77626532 Msa1040280:CDS
GAAGTTAAGGAGCGTCTTAT+TGG 0.293847 7_1:+77629266 Msa1040280:three_prime_UTR
CAACATGTATTCAGATTCTT+TGG 0.295631 7_1:+77629549 Msa1040280:three_prime_UTR
ATGCCAAAACCTGTGCAATT+TGG 0.295761 7_1:-77629437 None:intergenic
GTTGCCATGCAAATGGGGTT+GGG 0.298299 7_1:+77628334 Msa1040280:CDS
CAGGGTTGATTTGAAACCTT+TGG 0.301441 7_1:+77626852 Msa1040280:CDS
AGACCAAATCCTCAATTGTT+TGG 0.305048 7_1:+77628430 Msa1040280:CDS
AAGGGTCATGATAAATATTC+AGG 0.318516 7_1:+77626100 Msa1040280:CDS
AAGTTTGAGGATTTAGATAA+TGG 0.319645 7_1:+77626157 Msa1040280:CDS
CGATAGTGCCCATGCTTTGC+TGG 0.321114 7_1:+77629148 Msa1040280:CDS
AGATTTAGAGAATCAGGTTT+AGG 0.342984 7_1:+77626538 Msa1040280:CDS
CATATATCTATGTTACAAAA+TGG 0.346288 7_1:+77629609 Msa1040280:three_prime_UTR
GAAAGCATGTTACTAAATTC+CGG 0.346320 7_1:+77629738 Msa1040280:three_prime_UTR
ATTATTAGTGTTATTAAATA+GGG 0.346337 7_1:+77625606 Msa1040280:five_prime_UTR
GACCAAATCCTCAATTGTTT+GGG 0.348880 7_1:+77628431 Msa1040280:CDS
TGTTTCTTACATGAACTATC+TGG 0.353172 7_1:+77626295 Msa1040280:CDS
TAACGTTCAGTTGTACTTGC+AGG 0.354810 7_1:+77629296 Msa1040280:three_prime_UTR
GTTTGGGCTTCAAGCTGGTC+AGG 0.356213 7_1:+77628447 Msa1040280:CDS
TCCTCTGTTTGCTCTGACAA+TGG 0.356829 7_1:+77627030 Msa1040280:CDS
CATTGGATCCTTTAACTTAG+AGG 0.361856 7_1:-77628599 None:intergenic
ATTGGAAGTTTGATCAACTT+TGG 0.364253 7_1:-77626935 None:intergenic
TTGCCATGCAAATGGGGTTG+GGG 0.365073 7_1:+77628335 Msa1040280:CDS
GAGTCCATCTCATACTCTTA+AGG 0.368152 7_1:+77626081 Msa1040280:CDS
CGACGGCATATTTAACTGAT+TGG 0.373186 7_1:-77626479 None:intergenic
GATCATGGACGAGGCGTTAT+GGG 0.378376 7_1:+77627272 Msa1040280:CDS
CATAGCATTAGCATACTTGT+TGG 0.381894 7_1:-77629697 None:intergenic
ACGATTTGTTTGAGTTGGTT+TGG 0.382384 7_1:+77626002 Msa1040280:CDS
TCTGGACTTGCTGCTTTACA+TGG 0.382675 7_1:+77628400 Msa1040280:CDS
TGATCATGGACGAGGCGTTA+TGG 0.385981 7_1:+77627271 Msa1040280:CDS
TGTTGCCATGCAAATGGGGT+TGG 0.393996 7_1:+77628333 Msa1040280:CDS
GGCAACACTCATGGGTGAAA+AGG 0.394110 7_1:-77628317 None:intergenic
TTCATTACGGTTGAGGAAGA+TGG 0.397344 7_1:-77626622 None:intergenic
ATTCCTGCTGGTAACGTCAT+AGG 0.398850 7_1:-77628265 None:intergenic
TCATCTTGACTTGAAGAAAC+AGG 0.406226 7_1:-77626202 None:intergenic
TCATGACCTATGTGACAAAC+CGG 0.412603 7_1:-77625630 None:intergenic
TCATCAAAAGTTGATTTAAG+TGG 0.412874 7_1:+77626778 Msa1040280:CDS
ACTCTCACCAAGAACTTGAT+TGG 0.416264 7_1:-77626953 None:intergenic
ATCAGTCAGTGGAGCCATCC+AGG 0.417657 7_1:+77626833 Msa1040280:CDS
AGGTCAACCTTGTTGCAATT+CGG 0.419974 7_1:-77627530 None:intergenic
ATTGACCATGCTCTAAAATC+TGG 0.420707 7_1:-77626033 None:intergenic
TAGAAAGAGAGAATAGATTC+AGG 0.422135 7_1:-77625127 None:intergenic
TTAAGTATCCTCTTGTACTC+TGG 0.423527 7_1:-77629379 None:intergenic
AAAATGGGTGAAATTCATTA+CGG 0.424400 7_1:-77626635 None:intergenic
ACAGCTGATGAGTTCATAAC+AGG 0.425607 7_1:-77628520 None:intergenic
TACTTAAAAGTCATTGAGGT+TGG 0.425920 7_1:+77629395 Msa1040280:three_prime_UTR
AACTCAAACAAATCGTTTCT+GGG 0.426922 7_1:-77625995 None:intergenic
CTTCCTGTTGCACATACATC+TGG 0.427695 7_1:+77628382 Msa1040280:CDS
AGTCCAGATGTATGTGCAAC+AGG 0.429077 7_1:-77628385 None:intergenic
CAATTGTTTGGGCTTCAAGC+TGG 0.432706 7_1:+77628442 Msa1040280:CDS
AAAGCATGTTACTAAATTCC+GGG 0.438941 7_1:+77629739 Msa1040280:three_prime_UTR
GCCTTCATTGAGGTTTCCTT+AGG 0.439934 7_1:+77629915 Msa1040280:three_prime_UTR
CATTTGCATGGCAACACTCA+TGG 0.440440 7_1:-77628326 None:intergenic
ACTTACACAGATGATTGATC+TGG 0.443296 7_1:-77625864 None:intergenic
ACTTAAAAGTCATTGAGGTT+GGG 0.443736 7_1:+77629396 Msa1040280:three_prime_UTR
GTTACGTTACGCAAGAAACT+TGG 0.447971 7_1:+77625242 Msa1040280:five_prime_UTR
TTGAGGATAAAATAAAGATT+CGG 0.449816 7_1:-77625424 None:intergenic
AACTGCAAGTGAAGAACCCT+TGG 0.451538 7_1:-77626422 None:intergenic
AAGCAAAGAAAATTTATTTG+TGG 0.456578 7_1:-77626341 None:intergenic
CATGAGTGTTGCCATGCAAA+TGG 0.458192 7_1:+77628327 Msa1040280:CDS
TGATAGACTTAACAAGTTCC+CGG 0.459979 7_1:-77629757 None:intergenic
AACAAAGATGCAGCTGTGAT+AGG 0.462201 7_1:+77626739 Msa1040280:CDS
CAGAAACGATTTGTTTGAGT+TGG 0.463606 7_1:+77625997 Msa1040280:CDS
AGTCCATCTCATACTCTTAA+GGG 0.467462 7_1:+77626082 Msa1040280:CDS
ACTAATGGAAACCGTGGAAT+CGG 0.467680 7_1:+77628570 Msa1040280:CDS
AAATCTAATTGATTCAAATG+AGG 0.470228 7_1:-77626521 None:intergenic
ATGAGTGTTGCCATGCAAAT+GGG 0.476275 7_1:+77628328 Msa1040280:CDS
TGCCATGCAAATGGGGTTGG+GGG 0.478491 7_1:+77628336 Msa1040280:CDS
GCAACACTCATGGGTGAAAA+GGG 0.478775 7_1:-77628316 None:intergenic
ACTTGTTACGAAATTAACCT+TGG 0.480063 7_1:-77625199 None:intergenic
CTTGGTGAGAGTCGCAGAAA+AGG 0.480139 7_1:+77626964 Msa1040280:CDS
AACAAATCAAATGTCTATCC+AGG 0.484494 7_1:+77628669 Msa1040280:CDS
GATACATCTTCTTTGCAAGC+AGG 0.485143 7_1:-77626913 None:intergenic
GGTGAAATTCATTACGGTTG+AGG 0.487024 7_1:-77626629 None:intergenic
CATGACAGTACTATAGTTGT+GGG 0.490727 7_1:+77625648 Msa1040280:five_prime_UTR
TGAGTTCATAACAGGCTCTC+CGG 0.490845 7_1:-77628512 None:intergenic
AATCTAATTGATTCAAATGA+GGG 0.495878 7_1:-77626520 None:intergenic
TTTGGGCTTCAAGCTGGTCA+GGG 0.497255 7_1:+77628448 Msa1040280:CDS
TAGTGGAACAGCAGGACTAA+TGG 0.497439 7_1:+77628555 Msa1040280:CDS
AGGTGAGTTCCTTGAAATTG+AGG 0.498352 7_1:-77628361 None:intergenic
TACAAGGATAGGAAAGTTTG+AGG 0.498732 7_1:+77626144 Msa1040280:CDS
ACCGTCTTTCGTTTATGAGA+TGG 0.501696 7_1:+77629804 Msa1040280:three_prime_UTR
GCTTGAAGCCCAAACAATTG+AGG 0.502101 7_1:-77628439 None:intergenic
CACTGACTGATGACAATGTA+TGG 0.502818 7_1:-77626821 None:intergenic
AAAGCTAATCTTCAGAACAT+TGG 0.503501 7_1:+77626679 Msa1040280:CDS
TCATTGAGGTTTCCTTAGGA+AGG 0.505985 7_1:+77629919 Msa1040280:three_prime_UTR
TGCATGTGCTGCATTCCTGC+TGG 0.506406 7_1:-77628277 None:intergenic
GAGTTCATAACAGGCTCTCC+GGG 0.506487 7_1:-77628511 None:intergenic
TTTCTTCACAATGTGCATGC+TGG 0.509695 7_1:-77626588 None:intergenic
ATTGGATCCTTTAACTTAGA+GGG 0.511226 7_1:-77628598 None:intergenic
AATGAAACAAATACAAGGAT+AGG 0.513186 7_1:+77626133 Msa1040280:CDS
GAATCTGAATACATGTTGGC+AGG 0.513744 7_1:-77629544 None:intergenic
TTAGGTGAGAATAATACAAA+AGG 0.513763 7_1:+77626556 Msa1040280:CDS
GGTGTTAAAAGAACTGATCA+TGG 0.513840 7_1:+77627257 Msa1040280:CDS
TAAACAAGGTATCCTTTCCA+AGG 0.516786 7_1:+77626405 Msa1040280:CDS
TTAAATGCTAGTGGAACAGC+AGG 0.517982 7_1:+77628547 Msa1040280:CDS
AACATTGAAGCACATGGCAT+TGG 0.518946 7_1:-77628481 None:intergenic
GGCGGATAAAGCTTCAATGC+TGG 0.519274 7_1:+77628055 Msa1040280:intron
TTCAGATAGATTGTGCACTT+CGG 0.519860 7_1:-77627315 None:intergenic
AGGAATGCAGCACATGCATG+CGG 0.519863 7_1:+77628282 Msa1040280:CDS
TCATTACGGTTGAGGAAGAT+GGG 0.521159 7_1:-77626621 None:intergenic
CTTACACAGATGATTGATCT+GGG 0.521769 7_1:-77625863 None:intergenic
TTTGACTTGCCAAATTGCAC+AGG 0.522988 7_1:+77629428 Msa1040280:three_prime_UTR
TCAAGAGATTTCGGCTCCAA+AGG 0.523726 7_1:-77626868 None:intergenic
GTTTGAATGAAATTATTACA+AGG 0.527406 7_1:+77626179 Msa1040280:CDS
TTTACGCAGATTATGACAAT+GGG 0.530246 7_1:+77628223 Msa1040280:intron
ATTTGATGACGATGATGCCT+TGG 0.533845 7_1:+77626227 Msa1040280:CDS
TAAAGCTTCAATGCTGGATG+AGG 0.536704 7_1:+77628061 Msa1040280:CDS
TAGGGCCCGGTTTGTCACAT+AGG 0.537145 7_1:+77625624 Msa1040280:five_prime_UTR
AGCAAATTACATTATATCAA+AGG 0.537362 7_1:-77629880 None:intergenic
GCTGTAGAATTAAATGCTAG+TGG 0.540713 7_1:+77628538 Msa1040280:CDS
ACTTGGACTAGAAAATTTGT+CGG 0.542402 7_1:+77625259 Msa1040280:five_prime_UTR
TCCTAAGGAAACCTCAATGA+AGG 0.543312 7_1:-77629916 None:intergenic
TCATGACAGTACTATAGTTG+TGG 0.544478 7_1:+77625647 Msa1040280:five_prime_UTR
AACATTAAAGGACCTTCCTA+AGG 0.548974 7_1:-77629931 None:intergenic
AGGATACTTAAAAGTCATTG+AGG 0.550245 7_1:+77629391 Msa1040280:three_prime_UTR
TCAATGTAGCGTATTTATGT+TGG 0.550514 7_1:+77625720 Msa1040280:five_prime_UTR
TAGTGTTATTAAATAGGGCC+CGG 0.550715 7_1:+77625611 Msa1040280:five_prime_UTR
ATTATGACAATGGGAAGTCA+TGG 0.554557 7_1:+77628232 Msa1040280:CDS
TCATGCAGAGACGAAGAGAC+AGG 0.554875 7_1:+77627471 Msa1040280:intron
TGTGAGTTCACATTTGACAT+TGG 0.556678 7_1:-77628616 None:intergenic
ATACATGTTGGCAGGAAACA+TGG 0.556693 7_1:-77629536 None:intergenic
AGAGAAAGAATACTTGCAGT+TGG 0.557431 7_1:-77628112 None:intergenic
TGGTAGTGTGAAGCAACAAC+TGG 0.558389 7_1:+77629098 Msa1040280:intron
AGTGCACAATCTATCTGAAA+GGG 0.562116 7_1:+77627319 Msa1040280:CDS
ATTTGCATGGCAACACTCAT+GGG 0.564314 7_1:-77628325 None:intergenic
AAGTGCACAATCTATCTGAA+AGG 0.566770 7_1:+77627318 Msa1040280:CDS
TGCAATAATAGTGATTCTCT+CGG 0.571218 7_1:-77625347 None:intergenic
TTCATCAAGACCAGAACGTG+TGG 0.573082 7_1:+77626708 Msa1040280:CDS
GGCAGCAAAGTCATTTGTAG+TGG 0.574997 7_1:-77626320 None:intergenic
ACTTGCTGCTTTACATGGGA+TGG 0.575642 7_1:+77628405 Msa1040280:CDS
CAAAGAATCTGAATACATGT+TGG 0.583988 7_1:-77629548 None:intergenic
CTGGACTTGCTGCTTTACAT+GGG 0.587526 7_1:+77628401 Msa1040280:CDS
GAAATTCTCCAGAGTACAAG+AGG 0.587937 7_1:+77629371 Msa1040280:three_prime_UTR
ATGCCTATGACGTTACCAGC+AGG 0.590867 7_1:+77628262 Msa1040280:CDS
ACCATCTCATAAACGAAAGA+CGG 0.591785 7_1:-77629805 None:intergenic
CCATAGAAACAAATAGAACT+CGG 0.592753 7_1:+77625376 Msa1040280:five_prime_UTR
GGTTTCAAATCAACCCTGGA+TGG 0.593516 7_1:-77626847 None:intergenic
AGAGGGTGAAGCCGATTCCA+CGG 0.595574 7_1:-77628581 None:intergenic
CATGCAAAGGGGTGTGCAGT+GGG 0.596880 7_1:-77629638 None:intergenic
TTAGCTTTCACAATAGCCGC+AGG 0.598322 7_1:-77626664 None:intergenic
CTAAGTAAAGTAAACACTTG+AGG 0.599407 7_1:-77625441 None:intergenic
GCCTTGGTTGAATTGTGCAA+TGG 0.600384 7_1:+77626243 Msa1040280:CDS
TGGACTTGAACAATCAAAAG+TGG 0.604767 7_1:+77629121 Msa1040280:CDS
CAAAGGTTTCAAATCAACCC+TGG 0.605010 7_1:-77626851 None:intergenic
AAACAAGGTATCCTTTCCAA+GGG 0.605300 7_1:+77626406 Msa1040280:CDS
TCAGTCAGTGGAGCCATCCA+GGG 0.609277 7_1:+77626834 Msa1040280:CDS
AGAATCACTATTATTGCATG+TGG 0.610872 7_1:+77625352 Msa1040280:five_prime_UTR
CAGATGTATGTGCAACAGGA+AGG 0.625034 7_1:-77628381 None:intergenic
AAAAGAACTGATCATGGACG+AGG 0.626096 7_1:+77627263 Msa1040280:CDS
CATGACCTATGTGACAAACC+GGG 0.626517 7_1:-77625629 None:intergenic
CAAGTGAAGAACCCTTGGAA+AGG 0.635944 7_1:-77626417 None:intergenic
TGACCCTTAAGAGTATGAGA+TGG 0.635956 7_1:-77626085 None:intergenic
AAGACAGAGAATTCTATCAT+CGG 0.640566 7_1:-77629840 None:intergenic
TGAGTGTTGCCATGCAAATG+GGG 0.642524 7_1:+77628329 Msa1040280:CDS
AGCAGGACTAATGGAAACCG+TGG 0.642653 7_1:+77628564 Msa1040280:CDS
GCATGCAAAGGGGTGTGCAG+TGG 0.643932 7_1:-77629639 None:intergenic
AAGTGATTCACATCACTGCA+AGG 0.646942 7_1:+77629572 Msa1040280:three_prime_UTR
ATGCTAATGAAACAAATACA+AGG 0.649445 7_1:+77626128 Msa1040280:CDS
TCATCAAGACCAGAACGTGT+GGG 0.654328 7_1:+77626709 Msa1040280:CDS
TCCATTGCACAATTCAACCA+AGG 0.657257 7_1:-77626244 None:intergenic
ATGTGGCATAACTCATGCAG+AGG 0.662299 7_1:-77625795 None:intergenic
GAAGAGACAGGATCAATGAG+AGG 0.663392 7_1:+77627483 Msa1040280:CDS
TAAGAAAACATTGAAGCACA+TGG 0.666915 7_1:-77628487 None:intergenic
TGACATTGATGCAACAACGA+CGG 0.669946 7_1:-77626496 None:intergenic
TAGTGTGAAGCAACAACTGG+TGG 0.671787 7_1:+77629101 Msa1040280:intron
TTGCAGGTTATGACTCATTG+CGG 0.673850 7_1:+77629312 Msa1040280:three_prime_UTR
ACTCATACCGAATTGCAACA+AGG 0.682291 7_1:+77627523 Msa1040280:CDS
TTTAGTGACTCTCATAAACA+AGG 0.682360 7_1:+77626391 Msa1040280:CDS
GTGTGCAAGCAAATACATGT+TGG 0.686516 7_1:+77629234 Msa1040280:three_prime_UTR
GCTAATGCTATGCATCACAT+CGG 0.697940 7_1:+77629708 Msa1040280:three_prime_UTR
CATACATTGTCATCAGTCAG+TGG 0.712438 7_1:+77626822 Msa1040280:CDS
TTACACAGATGATTGATCTG+GGG 0.713496 7_1:-77625862 None:intergenic
ATGACAGTACTATAGTTGTG+GGG 0.722246 7_1:+77625649 Msa1040280:five_prime_UTR
GCCATTGTCAGAGCAAACAG+AGG 0.724625 7_1:-77627031 None:intergenic
TGGACTATGAGGATTCTGAG+TGG 0.766905 7_1:+77627103 Msa1040280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTAGTGTTATTAAAT+AGG + chr7_1:77625605-77625624 Msa1040280:five_prime_UTR 10.0%
!!! ATTATTAGTGTTATTAAATA+GGG + chr7_1:77625606-77625625 Msa1040280:five_prime_UTR 10.0%
!! ATTTAATAACACAAATTTAA+AGG + chr7_1:77628822-77628841 Msa1040280:intron 10.0%
!! AAATTGTAAAAGAAGATTAA+TGG - chr7_1:77625176-77625195 None:intergenic 15.0%
!!! AGAATCTTTTAAAAAATCTA+CGG + chr7_1:77626990-77627009 Msa1040280:CDS 15.0%
!!! TTATTTCTACTTTTCTTAAA+AGG - chr7_1:77627376-77627395 None:intergenic 15.0%
!! AAAACAAACTAAAATATATC+CGG - chr7_1:77627646-77627665 None:intergenic 15.0%
!!! TAGTTTGTTTTGATAAAATT+TGG + chr7_1:77627655-77627674 Msa1040280:intron 15.0%
!!! ATTTTTGTATCAAATCATAT+TGG + chr7_1:77627679-77627698 Msa1040280:intron 15.0%
!!! GTTTTTGTTTTATTTTGTTA+TGG + chr7_1:77629078-77629097 Msa1040280:intron 15.0%
!!! ATGGATATAATATCTTTTTA+TGG - chr7_1:77629520-77629539 None:intergenic 15.0%
!!! TTCTTTTACAATTTTTTCCA+AGG + chr7_1:77625182-77625201 Msa1040280:five_prime_UTR 20.0%
!! TTGAGGATAAAATAAAGATT+CGG - chr7_1:77625427-77625446 None:intergenic 20.0%
!! GTTTGAATGAAATTATTACA+AGG + chr7_1:77626179-77626198 Msa1040280:CDS 20.0%
!! AAGCAAAGAAAATTTATTTG+TGG - chr7_1:77626344-77626363 None:intergenic 20.0%
!!! AATCTAATTGATTCAAATGA+GGG - chr7_1:77626523-77626542 None:intergenic 20.0%
!!! AAATCTAATTGATTCAAATG+AGG - chr7_1:77626524-77626543 None:intergenic 20.0%
!!! ACAATTTTTTGTTAACTTGT+AGG + chr7_1:77627214-77627233 Msa1040280:intron 20.0%
!! CATGTTTCATATTCAAATTT+AGG - chr7_1:77627753-77627772 None:intergenic 20.0%
!!! AATATTTTAGTTAGATGATG+TGG - chr7_1:77627870-77627889 None:intergenic 20.0%
!! TAAAGATCTTACACTAATAA+TGG + chr7_1:77627958-77627977 Msa1040280:intron 20.0%
!! AAAGATCTTACACTAATAAT+GGG + chr7_1:77627959-77627978 Msa1040280:intron 20.0%
!!! TTTTTGACTTGATATTTCTT+AGG + chr7_1:77628034-77628053 Msa1040280:intron 20.0%
!! ATTGAAGGAAAATTGTAAAA+GGG - chr7_1:77628139-77628158 None:intergenic 20.0%
!! GAAAAAACATTGCATTATAA+TGG - chr7_1:77628196-77628215 None:intergenic 20.0%
!! CAGACAATACTTAAAATAAA+CGG - chr7_1:77628788-77628807 None:intergenic 20.0%
!!! TTTTAAGTATTGTCTGTTTT+AGG + chr7_1:77628792-77628811 Msa1040280:intron 20.0%
!!! TTTGAGACTAAAAAATATGT+AGG + chr7_1:77628856-77628875 Msa1040280:intron 20.0%
!!! CTTTTATCTGAAAATTGTAT+TGG - chr7_1:77628930-77628949 None:intergenic 20.0%
!! AATTCAAAAGAACAATTTAG+TGG - chr7_1:77628988-77629007 None:intergenic 20.0%
!! AATAAAACAAAAACATCAAC+AGG - chr7_1:77629072-77629091 None:intergenic 20.0%
!! CATATATCTATGTTACAAAA+TGG + chr7_1:77629609-77629628 Msa1040280:three_prime_UTR 20.0%
!! AGCAAATTACATTATATCAA+AGG - chr7_1:77629883-77629902 None:intergenic 20.0%
!! TGATTCAACAAAAACATTAA+AGG - chr7_1:77629946-77629965 None:intergenic 20.0%
!! TAAATTGGAAGAAAAAAAAG+AGG - chr7_1:77629973-77629992 None:intergenic 20.0%
! ACACAATTTCTAACACTAAT+GGG - chr7_1:77625899-77625918 None:intergenic 25.0%
! TACACAATTTCTAACACTAA+TGG - chr7_1:77625900-77625919 None:intergenic 25.0%
! ATGCTAATGAAACAAATACA+AGG + chr7_1:77626128-77626147 Msa1040280:CDS 25.0%
! AATGAAACAAATACAAGGAT+AGG + chr7_1:77626133-77626152 Msa1040280:CDS 25.0%
! AAGTTTGAGGATTTAGATAA+TGG + chr7_1:77626157-77626176 Msa1040280:CDS 25.0%
! TCAATTAGATTTAGAGAATC+AGG + chr7_1:77626532-77626551 Msa1040280:CDS 25.0%
! TTAGGTGAGAATAATACAAA+AGG + chr7_1:77626556-77626575 Msa1040280:CDS 25.0%
! AAAATGGGTGAAATTCATTA+CGG - chr7_1:77626638-77626657 None:intergenic 25.0%
!! TCATCAAAAGTTGATTTAAG+TGG + chr7_1:77626778-77626797 Msa1040280:CDS 25.0%
!! AAATTTGAAGCGAAAAAATC+TGG + chr7_1:77627083-77627102 Msa1040280:CDS 25.0%
! CACAAGATAATTCAAGAAAT+AGG - chr7_1:77627162-77627181 None:intergenic 25.0%
!!! GATTTTGAAGATGAATCAAT+TGG + chr7_1:77627236-77627255 Msa1040280:CDS 25.0%
! TACATTATCAGTTAACCATA+TGG - chr7_1:77627932-77627951 None:intergenic 25.0%
! AAGATCTTACACTAATAATG+GGG + chr7_1:77627960-77627979 Msa1040280:intron 25.0%
! GATTGAAGGAAAATTGTAAA+AGG - chr7_1:77628140-77628159 None:intergenic 25.0%
! TGTGAAATATCAAAATTCGA+AGG - chr7_1:77628162-77628181 None:intergenic 25.0%
! ACAAGTTATGCTTAAAAACA+AGG + chr7_1:77628636-77628655 Msa1040280:CDS 25.0%
! CAAGTTATGCTTAAAAACAA+GGG + chr7_1:77628637-77628656 Msa1040280:CDS 25.0%
!! TTTCATTTCCTAGATTTTTC+TGG + chr7_1:77629035-77629054 Msa1040280:intron 25.0%
!!! TTGGTTTTGATTTGAAGTTA+AGG + chr7_1:77629253-77629272 Msa1040280:three_prime_UTR 25.0%
!!! TAATTTTGTTTGCATGCAAA+GGG - chr7_1:77629653-77629672 None:intergenic 25.0%
!!! TTAATTTTGTTTGCATGCAA+AGG - chr7_1:77629654-77629673 None:intergenic 25.0%
TAGAAAGAGAGAATAGATTC+AGG - chr7_1:77625130-77625149 None:intergenic 30.0%
! ACTTGTTACGAAATTAACCT+TGG - chr7_1:77625202-77625221 None:intergenic 30.0%
! ACTTGGACTAGAAAATTTGT+CGG + chr7_1:77625259-77625278 Msa1040280:five_prime_UTR 30.0%
TGCAATAATAGTGATTCTCT+CGG - chr7_1:77625350-77625369 None:intergenic 30.0%
AGAATCACTATTATTGCATG+TGG + chr7_1:77625352-77625371 Msa1040280:five_prime_UTR 30.0%
CCATAGAAACAAATAGAACT+CGG + chr7_1:77625376-77625395 Msa1040280:five_prime_UTR 30.0%
CTAAGTAAAGTAAACACTTG+AGG - chr7_1:77625444-77625463 None:intergenic 30.0%
TCAATGTAGCGTATTTATGT+TGG + chr7_1:77625720-77625739 Msa1040280:five_prime_UTR 30.0%
!! CAACTTTTTCTTTAGACATG+TGG - chr7_1:77625815-77625834 None:intergenic 30.0%
AACTCAAACAAATCGTTTCT+GGG - chr7_1:77625998-77626017 None:intergenic 30.0%
AAGGGTCATGATAAATATTC+AGG + chr7_1:77626100-77626119 Msa1040280:CDS 30.0%
TGTTTCTTACATGAACTATC+TGG + chr7_1:77626295-77626314 Msa1040280:CDS 30.0%
TTTAGTGACTCTCATAAACA+AGG + chr7_1:77626391-77626410 Msa1040280:CDS 30.0%
!! AGTTGAAGATTTTGATACCT+CGG + chr7_1:77626441-77626460 Msa1040280:CDS 30.0%
AGATTTAGAGAATCAGGTTT+AGG + chr7_1:77626538-77626557 Msa1040280:CDS 30.0%
AAAGCTAATCTTCAGAACAT+TGG + chr7_1:77626679-77626698 Msa1040280:CDS 30.0%
! GTGTTTTTCTCAAGAGATTT+CGG - chr7_1:77626880-77626899 None:intergenic 30.0%
ATTGGAAGTTTGATCAACTT+TGG - chr7_1:77626938-77626957 None:intergenic 30.0%
!! CTTTTCTTAAAAGGCACAAA+TGG - chr7_1:77627367-77627386 None:intergenic 30.0%
!!! TGACCTTTTTTTCTTTCTTC+AGG + chr7_1:77627547-77627566 Msa1040280:CDS 30.0%
GAACCTGAAGAAAGAAAAAA+AGG - chr7_1:77627553-77627572 None:intergenic 30.0%
!! ATAGAATGTTGATTCTCACT+TGG + chr7_1:77627606-77627625 Msa1040280:intron 30.0%
! CTTGGAATTTAAGATTTGAC+CGG + chr7_1:77627624-77627643 Msa1040280:intron 30.0%
! AATATTCTTTTCTCGAGAGT+TGG + chr7_1:77627904-77627923 Msa1040280:intron 30.0%
! TTGACTTGATATTTCTTAGG+CGG + chr7_1:77628037-77628056 Msa1040280:intron 30.0%
ATCAAAATTCGAAGGATTGA+AGG - chr7_1:77628154-77628173 None:intergenic 30.0%
! TTTTACGCAGATTATGACAA+TGG + chr7_1:77628222-77628241 Msa1040280:intron 30.0%
TTTACGCAGATTATGACAAT+GGG + chr7_1:77628223-77628242 Msa1040280:intron 30.0%
TAAGAAAACATTGAAGCACA+TGG - chr7_1:77628490-77628509 None:intergenic 30.0%
! ATTGGATCCTTTAACTTAGA+GGG - chr7_1:77628601-77628620 None:intergenic 30.0%
AACAAATCAAATGTCTATCC+AGG + chr7_1:77628669-77628688 Msa1040280:CDS 30.0%
CATATGCACAAAAACAGAAA+AGG - chr7_1:77628731-77628750 None:intergenic 30.0%
ATGACTTACCAGAAAAATCT+AGG - chr7_1:77629046-77629065 None:intergenic 30.0%
AGGATACTTAAAAGTCATTG+AGG + chr7_1:77629391-77629410 Msa1040280:three_prime_UTR 30.0%
TACTTAAAAGTCATTGAGGT+TGG + chr7_1:77629395-77629414 Msa1040280:three_prime_UTR 30.0%
ACTTAAAAGTCATTGAGGTT+GGG + chr7_1:77629396-77629415 Msa1040280:three_prime_UTR 30.0%
CAATTTGGCAAGTCAAAAAT+TGG - chr7_1:77629425-77629444 None:intergenic 30.0%
CAAAGAATCTGAATACATGT+TGG - chr7_1:77629551-77629570 None:intergenic 30.0%
CAACATGTATTCAGATTCTT+TGG + chr7_1:77629549-77629568 Msa1040280:three_prime_UTR 30.0%
!! AATTTTGTTTGCATGCAAAG+GGG - chr7_1:77629652-77629671 None:intergenic 30.0%
! GAAAGCATGTTACTAAATTC+CGG + chr7_1:77629738-77629757 Msa1040280:three_prime_UTR 30.0%
AAAGCATGTTACTAAATTCC+GGG + chr7_1:77629739-77629758 Msa1040280:three_prime_UTR 30.0%
AAGACAGAGAATTCTATCAT+CGG - chr7_1:77629843-77629862 None:intergenic 30.0%
!! CCGAGTTCTATTTGTTTCTA+TGG - chr7_1:77625379-77625398 None:intergenic 35.0%
! CAAATTCGTTGTTGCTTGTT+AGG - chr7_1:77625545-77625564 None:intergenic 35.0%
CTAACAAGCAACAACGAATT+TGG + chr7_1:77625543-77625562 Msa1040280:five_prime_UTR 35.0%
! TAGTGTTATTAAATAGGGCC+CGG + chr7_1:77625611-77625630 Msa1040280:five_prime_UTR 35.0%
TCATGACAGTACTATAGTTG+TGG + chr7_1:77625647-77625666 Msa1040280:five_prime_UTR 35.0%
CATGACAGTACTATAGTTGT+GGG + chr7_1:77625648-77625667 Msa1040280:five_prime_UTR 35.0%
ATGACAGTACTATAGTTGTG+GGG + chr7_1:77625649-77625668 Msa1040280:five_prime_UTR 35.0%
TTACACAGATGATTGATCTG+GGG - chr7_1:77625865-77625884 None:intergenic 35.0%
CTTACACAGATGATTGATCT+GGG - chr7_1:77625866-77625885 None:intergenic 35.0%
ACTTACACAGATGATTGATC+TGG - chr7_1:77625867-77625886 None:intergenic 35.0%
CAACTCAAACAAATCGTTTC+TGG - chr7_1:77625999-77626018 None:intergenic 35.0%
! CAGAAACGATTTGTTTGAGT+TGG + chr7_1:77625997-77626016 Msa1040280:CDS 35.0%
!! ACGATTTGTTTGAGTTGGTT+TGG + chr7_1:77626002-77626021 Msa1040280:CDS 35.0%
!!! AATGACCAGATTTTAGAGCA+TGG + chr7_1:77626028-77626047 Msa1040280:CDS 35.0%
!! ATTGACCATGCTCTAAAATC+TGG - chr7_1:77626036-77626055 None:intergenic 35.0%
AGTCCATCTCATACTCTTAA+GGG + chr7_1:77626082-77626101 Msa1040280:CDS 35.0%
TACAAGGATAGGAAAGTTTG+AGG + chr7_1:77626144-77626163 Msa1040280:CDS 35.0%
! TCATCTTGACTTGAAGAAAC+AGG - chr7_1:77626205-77626224 None:intergenic 35.0%
! TAAACAAGGTATCCTTTCCA+AGG + chr7_1:77626405-77626424 Msa1040280:CDS 35.0%
! AAACAAGGTATCCTTTCCAA+GGG + chr7_1:77626406-77626425 Msa1040280:CDS 35.0%
!! GTTGAAGATTTTGATACCTC+GGG + chr7_1:77626442-77626461 Msa1040280:CDS 35.0%
!! TCAACTTTTGATGATTCGCA+AGG - chr7_1:77626772-77626791 None:intergenic 35.0%
! CAATGTATGGCTGAACTTTT+TGG - chr7_1:77626811-77626830 None:intergenic 35.0%
CAAACTTCCAATCAAGTTCT+TGG + chr7_1:77626946-77626965 Msa1040280:CDS 35.0%
CTTGAATTATCTTGTGAGTG+TGG + chr7_1:77627166-77627185 Msa1040280:intron 35.0%
GGTGTTAAAAGAACTGATCA+TGG + chr7_1:77627257-77627276 Msa1040280:CDS 35.0%
TTCAGATAGATTGTGCACTT+CGG - chr7_1:77627318-77627337 None:intergenic 35.0%
AAGTGCACAATCTATCTGAA+AGG + chr7_1:77627318-77627337 Msa1040280:CDS 35.0%
AGTGCACAATCTATCTGAAA+GGG + chr7_1:77627319-77627338 Msa1040280:CDS 35.0%
!!! ACTGAAGCTCAAGTTTTGTT+TGG + chr7_1:77627716-77627735 Msa1040280:intron 35.0%
!!! AAGCTCAAGTTTTGTTTGGA+TGG + chr7_1:77627720-77627739 Msa1040280:intron 35.0%
!! TGCTATTTCTGTTGTGTGAA+TGG - chr7_1:77627781-77627800 None:intergenic 35.0%
GAGAAATCTAGCATAGAAAC+AGG - chr7_1:77627999-77628018 None:intergenic 35.0%
AGAGAAAGAATACTTGCAGT+TGG - chr7_1:77628115-77628134 None:intergenic 35.0%
ATTATGACAATGGGAAGTCA+TGG + chr7_1:77628232-77628251 Msa1040280:CDS 35.0%
AGACCAAATCCTCAATTGTT+TGG + chr7_1:77628430-77628449 Msa1040280:CDS 35.0%
GACCAAATCCTCAATTGTTT+GGG + chr7_1:77628431-77628450 Msa1040280:CDS 35.0%
! GCTTCAATGTTTTCTTATCC+CGG + chr7_1:77628493-77628512 Msa1040280:CDS 35.0%
GCTGTAGAATTAAATGCTAG+TGG + chr7_1:77628538-77628557 Msa1040280:CDS 35.0%
! CATTGGATCCTTTAACTTAG+AGG - chr7_1:77628602-77628621 None:intergenic 35.0%
TGTGAGTTCACATTTGACAT+TGG - chr7_1:77628619-77628638 None:intergenic 35.0%
ACTTAAAATAAACGGTTCCG+CGG - chr7_1:77628780-77628799 None:intergenic 35.0%
!! AAGTATTGTCTGTTTTAGGC+AGG + chr7_1:77628796-77628815 Msa1040280:intron 35.0%
!! AGTATTGTCTGTTTTAGGCA+GGG + chr7_1:77628797-77628816 Msa1040280:intron 35.0%
CATAAGACTTTGTCAGAACA+AGG - chr7_1:77628898-77628917 None:intergenic 35.0%
! TTCTGACAAAGTCTTATGAC+AGG + chr7_1:77628900-77628919 Msa1040280:intron 35.0%
! TCTGACAAAGTCTTATGACA+GGG + chr7_1:77628901-77628920 Msa1040280:intron 35.0%
TGGACTTGAACAATCAAAAG+TGG + chr7_1:77629121-77629140 Msa1040280:CDS 35.0%
TTAAGTATCCTCTTGTACTC+TGG - chr7_1:77629382-77629401 None:intergenic 35.0%
CATAGCATTAGCATACTTGT+TGG - chr7_1:77629700-77629719 None:intergenic 35.0%
TGATAGACTTAACAAGTTCC+CGG - chr7_1:77629760-77629779 None:intergenic 35.0%
ACCATCTCATAAACGAAAGA+CGG - chr7_1:77629808-77629827 None:intergenic 35.0%
AACATTAAAGGACCTTCCTA+AGG - chr7_1:77629934-77629953 None:intergenic 35.0%
GTTACGTTACGCAAGAAACT+TGG + chr7_1:77625242-77625261 Msa1040280:five_prime_UTR 40.0%
TCATGACCTATGTGACAAAC+CGG - chr7_1:77625633-77625652 None:intergenic 40.0%
!!! TGGACTCGTTTTAGCTCTAT+TGG - chr7_1:77626068-77626087 None:intergenic 40.0%
GAGTCCATCTCATACTCTTA+AGG + chr7_1:77626081-77626100 Msa1040280:CDS 40.0%
! TGACCCTTAAGAGTATGAGA+TGG - chr7_1:77626088-77626107 None:intergenic 40.0%
!! ATTTGATGACGATGATGCCT+TGG + chr7_1:77626227-77626246 Msa1040280:CDS 40.0%
TCCATTGCACAATTCAACCA+AGG - chr7_1:77626247-77626266 None:intergenic 40.0%
CGACGGCATATTTAACTGAT+TGG - chr7_1:77626482-77626501 None:intergenic 40.0%
TGACATTGATGCAACAACGA+CGG - chr7_1:77626499-77626518 None:intergenic 40.0%
TTTCTTCACAATGTGCATGC+TGG - chr7_1:77626591-77626610 None:intergenic 40.0%
TCATTACGGTTGAGGAAGAT+GGG - chr7_1:77626624-77626643 None:intergenic 40.0%
TTCATTACGGTTGAGGAAGA+TGG - chr7_1:77626625-77626644 None:intergenic 40.0%
GGTGAAATTCATTACGGTTG+AGG - chr7_1:77626632-77626651 None:intergenic 40.0%
AACAAAGATGCAGCTGTGAT+AGG + chr7_1:77626739-77626758 Msa1040280:CDS 40.0%
! CACTGACTGATGACAATGTA+TGG - chr7_1:77626824-77626843 None:intergenic 40.0%
CATACATTGTCATCAGTCAG+TGG + chr7_1:77626822-77626841 Msa1040280:CDS 40.0%
CAAAGGTTTCAAATCAACCC+TGG - chr7_1:77626854-77626873 None:intergenic 40.0%
!! CAGGGTTGATTTGAAACCTT+TGG + chr7_1:77626852-77626871 Msa1040280:CDS 40.0%
GATACATCTTCTTTGCAAGC+AGG - chr7_1:77626916-77626935 None:intergenic 40.0%
ACTCTCACCAAGAACTTGAT+TGG - chr7_1:77626956-77626975 None:intergenic 40.0%
GCGAAAAAATCTGGACTATG+AGG + chr7_1:77627092-77627111 Msa1040280:CDS 40.0%
AAAAGAACTGATCATGGACG+AGG + chr7_1:77627263-77627282 Msa1040280:CDS 40.0%
ACTCATACCGAATTGCAACA+AGG + chr7_1:77627523-77627542 Msa1040280:CDS 40.0%
AGGTCAACCTTGTTGCAATT+CGG - chr7_1:77627533-77627552 None:intergenic 40.0%
TAAAGCTTCAATGCTGGATG+AGG + chr7_1:77628061-77628080 Msa1040280:CDS 40.0%
ATTTGCATGGCAACACTCAT+GGG - chr7_1:77628328-77628347 None:intergenic 40.0%
! ATGAGTGTTGCCATGCAAAT+GGG + chr7_1:77628328-77628347 Msa1040280:CDS 40.0%
AGGTGAGTTCCTTGAAATTG+AGG - chr7_1:77628364-77628383 None:intergenic 40.0%
AGCCCAAACAATTGAGGATT+TGG - chr7_1:77628436-77628455 None:intergenic 40.0%
AACATTGAAGCACATGGCAT+TGG - chr7_1:77628484-77628503 None:intergenic 40.0%
ACAGCTGATGAGTTCATAAC+AGG - chr7_1:77628523-77628542 None:intergenic 40.0%
TTAAATGCTAGTGGAACAGC+AGG + chr7_1:77628547-77628566 Msa1040280:CDS 40.0%
ACTAATGGAAACCGTGGAAT+CGG + chr7_1:77628570-77628589 Msa1040280:CDS 40.0%
TCTCAAGAAGCAAACAAACC+TGG - chr7_1:77628690-77628709 None:intergenic 40.0%
!! GTATTGTCTGTTTTAGGCAG+GGG + chr7_1:77628798-77628817 Msa1040280:intron 40.0%
!! GTCATTTTCCAGCAAAGCAT+GGG - chr7_1:77629159-77629178 None:intergenic 40.0%
!!! TGTCATTTTCCAGCAAAGCA+TGG - chr7_1:77629160-77629179 None:intergenic 40.0%
GTGTGCAAGCAAATACATGT+TGG + chr7_1:77629234-77629253 Msa1040280:three_prime_UTR 40.0%
!! GAAGTTAAGGAGCGTCTTAT+TGG + chr7_1:77629266-77629285 Msa1040280:three_prime_UTR 40.0%
TAACGTTCAGTTGTACTTGC+AGG + chr7_1:77629296-77629315 Msa1040280:three_prime_UTR 40.0%
TTGCAGGTTATGACTCATTG+CGG + chr7_1:77629312-77629331 Msa1040280:three_prime_UTR 40.0%
GAAATTCTCCAGAGTACAAG+AGG + chr7_1:77629371-77629390 Msa1040280:three_prime_UTR 40.0%
!! TTTGACTTGCCAAATTGCAC+AGG + chr7_1:77629428-77629447 Msa1040280:three_prime_UTR 40.0%
! TTGCCAAATTGCACAGGTTT+TGG + chr7_1:77629434-77629453 Msa1040280:three_prime_UTR 40.0%
ATGCCAAAACCTGTGCAATT+TGG - chr7_1:77629440-77629459 None:intergenic 40.0%
ATACATGTTGGCAGGAAACA+TGG - chr7_1:77629539-77629558 None:intergenic 40.0%
GAATCTGAATACATGTTGGC+AGG - chr7_1:77629547-77629566 None:intergenic 40.0%
AAGTGATTCACATCACTGCA+AGG + chr7_1:77629572-77629591 Msa1040280:three_prime_UTR 40.0%
GCTAATGCTATGCATCACAT+CGG + chr7_1:77629708-77629727 Msa1040280:three_prime_UTR 40.0%
ACCGTCTTTCGTTTATGAGA+TGG + chr7_1:77629804-77629823 Msa1040280:three_prime_UTR 40.0%
! CTTTTGTGTTGCCTTCATTG+AGG + chr7_1:77629905-77629924 Msa1040280:three_prime_UTR 40.0%
TCCTAAGGAAACCTCAATGA+AGG - chr7_1:77629919-77629938 None:intergenic 40.0%
TCATTGAGGTTTCCTTAGGA+AGG + chr7_1:77629919-77629938 Msa1040280:three_prime_UTR 40.0%
CATGACCTATGTGACAAACC+GGG - chr7_1:77625632-77625651 None:intergenic 45.0%
! ATAGTTGTGGGGCTTGTTTC+AGG + chr7_1:77625660-77625679 Msa1040280:five_prime_UTR 45.0%
ATGTGGCATAACTCATGCAG+AGG - chr7_1:77625798-77625817 None:intergenic 45.0%
GGTCTGCATTGAATCACACA+AGG - chr7_1:77625977-77625996 None:intergenic 45.0%
GCCTTGGTTGAATTGTGCAA+TGG + chr7_1:77626243-77626262 Msa1040280:CDS 45.0%
GGCAGCAAAGTCATTTGTAG+TGG - chr7_1:77626323-77626342 None:intergenic 45.0%
CAAGTGAAGAACCCTTGGAA+AGG - chr7_1:77626420-77626439 None:intergenic 45.0%
AACTGCAAGTGAAGAACCCT+TGG - chr7_1:77626425-77626444 None:intergenic 45.0%
! CACCCATTTTGCAAAACCTG+CGG + chr7_1:77626648-77626667 Msa1040280:CDS 45.0%
! AGCCGCAGGTTTTGCAAAAT+GGG - chr7_1:77626653-77626672 None:intergenic 45.0%
! TAGCCGCAGGTTTTGCAAAA+TGG - chr7_1:77626654-77626673 None:intergenic 45.0%
! TTAGCTTTCACAATAGCCGC+AGG - chr7_1:77626667-77626686 None:intergenic 45.0%
TTCATCAAGACCAGAACGTG+TGG + chr7_1:77626708-77626727 Msa1040280:CDS 45.0%
TCATCAAGACCAGAACGTGT+GGG + chr7_1:77626709-77626728 Msa1040280:CDS 45.0%
GGTTTCAAATCAACCCTGGA+TGG - chr7_1:77626850-77626869 None:intergenic 45.0%
TCAAGAGATTTCGGCTCCAA+AGG - chr7_1:77626871-77626890 None:intergenic 45.0%
TCCTCTGTTTGCTCTGACAA+TGG + chr7_1:77627030-77627049 Msa1040280:CDS 45.0%
TGGACTATGAGGATTCTGAG+TGG + chr7_1:77627103-77627122 Msa1040280:CDS 45.0%
GAAGAGACAGGATCAATGAG+AGG + chr7_1:77627483-77627502 Msa1040280:CDS 45.0%
! ATTCCTGCTGGTAACGTCAT+AGG - chr7_1:77628268-77628287 None:intergenic 45.0%
GCAACACTCATGGGTGAAAA+GGG - chr7_1:77628319-77628338 None:intergenic 45.0%
CATTTGCATGGCAACACTCA+TGG - chr7_1:77628329-77628348 None:intergenic 45.0%
! CATGAGTGTTGCCATGCAAA+TGG + chr7_1:77628327-77628346 Msa1040280:CDS 45.0%
! TGAGTGTTGCCATGCAAATG+GGG + chr7_1:77628329-77628348 Msa1040280:CDS 45.0%
CAGATGTATGTGCAACAGGA+AGG - chr7_1:77628384-77628403 None:intergenic 45.0%
CTTCCTGTTGCACATACATC+TGG + chr7_1:77628382-77628401 Msa1040280:CDS 45.0%
AGTCCAGATGTATGTGCAAC+AGG - chr7_1:77628388-77628407 None:intergenic 45.0%
!! TCTGGACTTGCTGCTTTACA+TGG + chr7_1:77628400-77628419 Msa1040280:CDS 45.0%
!! CTGGACTTGCTGCTTTACAT+GGG + chr7_1:77628401-77628420 Msa1040280:CDS 45.0%
!! ACTTGCTGCTTTACATGGGA+TGG + chr7_1:77628405-77628424 Msa1040280:CDS 45.0%
GCTTGAAGCCCAAACAATTG+AGG - chr7_1:77628442-77628461 None:intergenic 45.0%
CAATTGTTTGGGCTTCAAGC+TGG + chr7_1:77628442-77628461 Msa1040280:CDS 45.0%
TGAGTTCATAACAGGCTCTC+CGG - chr7_1:77628515-77628534 None:intergenic 45.0%
TAGTGGAACAGCAGGACTAA+TGG + chr7_1:77628555-77628574 Msa1040280:CDS 45.0%
GGCTTCACCCTCTAAGTTAA+AGG + chr7_1:77628591-77628610 Msa1040280:CDS 45.0%
TATATCTGACCTCAAGTCCG+CGG + chr7_1:77628760-77628779 Msa1040280:intron 45.0%
! TGGTAGTGTGAAGCAACAAC+TGG + chr7_1:77629098-77629117 Msa1040280:intron 45.0%
TAGTGTGAAGCAACAACTGG+TGG + chr7_1:77629101-77629120 Msa1040280:intron 45.0%
!! TGCACAGGTTTTGGCATCTT+TGG + chr7_1:77629443-77629462 Msa1040280:three_prime_UTR 45.0%
!! AGGTTTTGGCATCTTTGGAG+TGG + chr7_1:77629448-77629467 Msa1040280:three_prime_UTR 45.0%
GCCTTCATTGAGGTTTCCTT+AGG + chr7_1:77629915-77629934 Msa1040280:three_prime_UTR 45.0%
!!! GGTGCTAGTTTTTAGTCCCG+AGG - chr7_1:77626461-77626480 None:intergenic 50.0%
TTCTTTGCTCCCACACGTTC+TGG - chr7_1:77626721-77626740 None:intergenic 50.0%
CTTGGTGAGAGTCGCAGAAA+AGG + chr7_1:77626964-77626983 Msa1040280:CDS 50.0%
GCCATTGTCAGAGCAAACAG+AGG - chr7_1:77627034-77627053 None:intergenic 50.0%
! TGATCATGGACGAGGCGTTA+TGG + chr7_1:77627271-77627290 Msa1040280:CDS 50.0%
! GATCATGGACGAGGCGTTAT+GGG + chr7_1:77627272-77627291 Msa1040280:CDS 50.0%
TCATGCAGAGACGAAGAGAC+AGG + chr7_1:77627471-77627490 Msa1040280:intron 50.0%
TCTCGAGAGTTGGCACCATA+TGG + chr7_1:77627914-77627933 Msa1040280:intron 50.0%
GGCGGATAAAGCTTCAATGC+TGG + chr7_1:77628055-77628074 Msa1040280:intron 50.0%
ATGCCTATGACGTTACCAGC+AGG + chr7_1:77628262-77628281 Msa1040280:CDS 50.0%
AGGAATGCAGCACATGCATG+CGG + chr7_1:77628282-77628301 Msa1040280:CDS 50.0%
GGCAACACTCATGGGTGAAA+AGG - chr7_1:77628320-77628339 None:intergenic 50.0%
TGTTGCCATGCAAATGGGGT+TGG + chr7_1:77628333-77628352 Msa1040280:CDS 50.0%
GTTGCCATGCAAATGGGGTT+GGG + chr7_1:77628334-77628353 Msa1040280:CDS 50.0%
TTGCCATGCAAATGGGGTTG+GGG + chr7_1:77628335-77628354 Msa1040280:CDS 50.0%
!! TTGGGGGTGCCTCAATTTCA+AGG + chr7_1:77628352-77628371 Msa1040280:CDS 50.0%
TTTGGGCTTCAAGCTGGTCA+GGG + chr7_1:77628448-77628467 Msa1040280:CDS 50.0%
GAGTTCATAACAGGCTCTCC+GGG - chr7_1:77628514-77628533 None:intergenic 50.0%
AGCAGGACTAATGGAAACCG+TGG + chr7_1:77628564-77628583 Msa1040280:CDS 50.0%
! TAGGGCCCGGTTTGTCACAT+AGG + chr7_1:77625624-77625643 Msa1040280:five_prime_UTR 55.0%
ATCAGTCAGTGGAGCCATCC+AGG + chr7_1:77626833-77626852 Msa1040280:CDS 55.0%
TCAGTCAGTGGAGCCATCCA+GGG + chr7_1:77626834-77626853 Msa1040280:CDS 55.0%
TGCATGTGCTGCATTCCTGC+TGG - chr7_1:77628280-77628299 None:intergenic 55.0%
TGCCATGCAAATGGGGTTGG+GGG + chr7_1:77628336-77628355 Msa1040280:CDS 55.0%
GTTTGGGCTTCAAGCTGGTC+AGG + chr7_1:77628447-77628466 Msa1040280:CDS 55.0%
! AGAGGGTGAAGCCGATTCCA+CGG - chr7_1:77628584-77628603 None:intergenic 55.0%
TAAACGGTTCCGCGGACTTG+AGG - chr7_1:77628772-77628791 None:intergenic 55.0%
CGATAGTGCCCATGCTTTGC+TGG + chr7_1:77629148-77629167 Msa1040280:CDS 55.0%
! CATGCAAAGGGGTGTGCAGT+GGG - chr7_1:77629641-77629660 None:intergenic 55.0%
CACCCCCAACCCCATTTGCA+TGG - chr7_1:77628341-77628360 None:intergenic 60.0%
! GCATGCAAAGGGGTGTGCAG+TGG - chr7_1:77629642-77629661 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77625108 77630001 77625108 ID=Msa1040280;Name=Msa1040280
chr7_1 mRNA 77625108 77630001 77625108 ID=Msa1040280-mRNA-1;Parent=Msa1040280;Name=Msa1040280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=681|0.83|0.85|1|1|1|7|784|688
chr7_1 exon 77625108 77625880 77625108 ID=Msa1040280-mRNA-1:exon:20485;Parent=Msa1040280-mRNA-1
chr7_1 exon 77625994 77627134 77625994 ID=Msa1040280-mRNA-1:exon:20486;Parent=Msa1040280-mRNA-1
chr7_1 exon 77627236 77627340 77627236 ID=Msa1040280-mRNA-1:exon:20487;Parent=Msa1040280-mRNA-1
chr7_1 exon 77627479 77627568 77627479 ID=Msa1040280-mRNA-1:exon:20488;Parent=Msa1040280-mRNA-1
chr7_1 exon 77628056 77628121 77628056 ID=Msa1040280-mRNA-1:exon:20489;Parent=Msa1040280-mRNA-1
chr7_1 exon 77628232 77628690 77628232 ID=Msa1040280-mRNA-1:exon:20490;Parent=Msa1040280-mRNA-1
chr7_1 exon 77629104 77630001 77629104 ID=Msa1040280-mRNA-1:exon:20491;Parent=Msa1040280-mRNA-1
chr7_1 five_prime_UTR 77625108 77625788 77625108 ID=Msa1040280-mRNA-1:five_prime_utr;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77625789 77625880 77625789 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77625994 77627134 77625994 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77627236 77627340 77627236 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77627479 77627568 77627479 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77628056 77628121 77628056 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77628232 77628690 77628232 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 CDS 77629104 77629217 77629104 ID=Msa1040280-mRNA-1:cds;Parent=Msa1040280-mRNA-1
chr7_1 three_prime_UTR 77629218 77630001 77629218 ID=Msa1040280-mRNA-1:three_prime_utr;Parent=Msa1040280-mRNA-1
Gene Sequence

>Msa1040280

ATGATGCCTCTGCATGAGTTATGCCACATGTCTAAAGAAAAAGTTGATCATAAAGAGATGAACAATTCTTGTACCCCAGATCAATCATCTGTACCCAGAAACGATTTGTTTGAGTTGGTTTGGCAAAATGACCAGATTTTAGAGCATGGTCAATCTAGTAATTCCAATAGAGCTAAAACGAGTCCATCTCATACTCTTAAGGGTCATGATAAATATTCAGGACAACATGCTAATGAAACAAATACAAGGATAGGAAAGTTTGAGGATTTAGATAATGGTTTGAATGAAATTATTACAAGGCCTGTTTCTTCAAGTCAAGATGAAGATTTGATGACGATGATGCCTTGGTTGAATTGTGCAATGGATGATGAACACTCTTTACATCGTAGTTCTTGTTTCTTACATGAACTATCTGGTTCCACTACAAATGACTTTGCTGCCACAAATAAATTTTCTTTGCTTGATAGAAAAAGTAATTGTATTCAAGTATTTAGTGACTCTCATAAACAAGGTATCCTTTCCAAGGGTTCTTCACTTGCAGTTGAAGATTTTGATACCTCGGGACTAAAAACTAGCACCAATCAGTTAAATATGCCGTCGTTGTTGCATCAATGTCAACCCTCATTTGAATCAATTAGATTTAGAGAATCAGGTTTAGGTGAGAATAATACAAAAGGTAATGCAAACCAGCATGCACATTGTGAAGAAATCTCTCATATCCCATCTTCCTCAACCGTAATGAATTTCACCCATTTTGCAAAACCTGCGGCTATTGTGAAAGCTAATCTTCAGAACATTGGTTTCTCTTCATCAAGACCAGAACGTGTGGGAGCAAAGAACAAAGATGCAGCTGTGATAGGAAGTAATCCTTGCGAATCATCAAAAGTTGATTTAAGTGGAGAATGTCCAAAAAGTTCAGCCATACATTGTCATCAGTCAGTGGAGCCATCCAGGGTTGATTTGAAACCTTTGGAGCCGAAATCTCTTGAGAAAAACACTAGTGTTTCTACTCCTGCTTGCAAAGAAGATGTATCCAAAGTTGATCAAACTTCCAATCAAGTTCTTGGTGAGAGTCGCAGAAAAGGTCAAGAATCTTTTAAAAAATCTACGGAGCTAACAGTAGTCTCTTCCTCTGTTTGCTCTGACAATGGCGCATATAGAAGTTCAGATGATGCAAATCAAAATTTGAAGCGAAAAAATCTGGACTATGAGGATTCTGAGTGGCACAGTGAAGATTTTGAAGATGAATCAATTGGTGTTAAAAGAACTGATCATGGACGAGGCGTTATGGGCTCAAAGAAAAATCGTTCAGCCGAAGTGCACAATCTATCTGAAAGGAGACGAAGAGACAGGATCAATGAGAGGATGCGTGCATTGCAAGAACTCATACCGAATTGCAACAAGGTTGACCTTTTTTTCTTTCTTCAGGCGGATAAAGCTTCAATGCTGGATGAGGCAATTGAGTATCTTAAATCACTTCAACTCCAACTGCAAATTATGACAATGGGAAGTCATGGTTTATACATGCCTATGACGTTACCAGCAGGAATGCAGCACATGCATGCGGCTCACATGTTTCCCTTTTCACCCATGAGTGTTGCCATGCAAATGGGGTTGGGGGTGCCTCAATTTCAAGGAACTCACCTTCCTGTTGCACATACATCTGGACTTGCTGCTTTACATGGGATGGCAAGACCAAATCCTCAATTGTTTGGGCTTCAAGCTGGTCAGGGACTGCACATGCCAATGCCATGTGCTTCAATGTTTTCTTATCCCGGAGAGCCTGTTATGAACTCATCAGCTGTAGAATTAAATGCTAGTGGAACAGCAGGACTAATGGAAACCGTGGAATCGGCTTCACCCTCTAAGTTAAAGGATCCAATGTCAAATGTGAACTCACAAGTTATGCTTAAAAACAAGGGATGTAGCTCAACAAATCAAATGTCTATCCAGTGTGAAGCAACAACTGGTGGACTTGAACAATCAAAAGTGGTACTCGATAGTGCCCATGCTTTGCTGGAAAATGACAAAAGAGACAACGTTGAGATTGATAAATCTCATGAGTAA
Protein sequence

>Msa1040280

MMPLHELCHMSKEKVDHKEMNNSCTPDQSSVPRNDLFELVWQNDQILEHGQSSNSNRAKTSPSHTLKGHDKYSGQHANETNTRIGKFEDLDNGLNEIITRPVSSSQDEDLMTMMPWLNCAMDDEHSLHRSSCFLHELSGSTTNDFAATNKFSLLDRKSNCIQVFSDSHKQGILSKGSSLAVEDFDTSGLKTSTNQLNMPSLLHQCQPSFESIRFRESGLGENNTKGNANQHAHCEEISHIPSSSTVMNFTHFAKPAAIVKANLQNIGFSSSRPERVGAKNKDAAVIGSNPCESSKVDLSGECPKSSAIHCHQSVEPSRVDLKPLEPKSLEKNTSVSTPACKEDVSKVDQTSNQVLGESRRKGQESFKKSTELTVVSSSVCSDNGAYRSSDDANQNLKRKNLDYEDSEWHSEDFEDESIGVKRTDHGRGVMGSKKNRSAEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFFLQADKASMLDEAIEYLKSLQLQLQIMTMGSHGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLGVPQFQGTHLPVAHTSGLAALHGMARPNPQLFGLQAGQGLHMPMPCASMFSYPGEPVMNSSAVELNASGTAGLMETVESASPSKLKDPMSNVNSQVMLKNKGCSSTNQMSIQCEATTGGLEQSKVVLDSAHALLENDKRDNVEIDKSHE*