AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1352240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352240 MtrunA17_Chr8g0389781 97.982 446 6 1 1 446 1 443 0.0 906
Msa1352240 MtrunA17_Chr8g0340761 52.860 437 152 16 1 417 1 403 7.14e-113 338
Msa1352240 MtrunA17_Chr2g0330921 37.381 420 187 15 1 410 1 354 4.27e-66 215
Msa1352240 MtrunA17_Chr1g0204901 39.348 460 212 19 1 433 1 420 1.89e-38 144
Msa1352240 MtrunA17_Chr1g0166431 31.957 460 225 15 1 433 7 405 6.72e-35 134
Msa1352240 MtrunA17_Chr4g0057321 31.180 449 232 15 1 420 1 401 3.71e-32 127
Msa1352240 MtrunA17_Chr1g0203711 36.164 365 172 12 63 385 47 392 2.06e-27 113
Msa1352240 MtrunA17_Chr8g0346021 63.415 82 19 2 106 184 112 185 5.31e-21 95.5
Msa1352240 MtrunA17_Chr7g0273951 32.384 281 121 11 126 391 106 332 1.37e-19 90.1
Msa1352240 MtrunA17_Chr4g0020671 37.879 132 60 3 56 184 47 159 1.35e-18 87.8
Msa1352240 MtrunA17_Chr6g0472551 67.797 59 19 0 128 186 119 177 4.89e-18 86.3
Msa1352240 MtrunA17_Chr1g0200161 37.500 232 118 8 1 214 1 223 6.37e-18 85.9
Msa1352240 MtrunA17_Chr3g0126901 61.429 70 22 1 108 177 99 163 1.27e-17 84.7
Msa1352240 MtrunA17_Chr4g0025441 71.698 53 15 0 125 177 95 147 6.51e-17 82.8
Msa1352240 MtrunA17_Chr8g0371131 56.716 67 29 0 125 191 70 136 6.69e-17 77.4
Msa1352240 MtrunA17_Chr7g0273861 60.656 61 24 0 128 188 127 187 8.25e-17 82.4
Msa1352240 MtrunA17_Chr4g0060381 60.000 60 24 0 128 187 102 161 1.87e-16 81.6
Msa1352240 MtrunA17_Chr3g0135851 66.038 53 18 0 125 177 90 142 3.89e-15 77.0
Msa1352240 MtrunA17_Chr1g0146931 58.824 68 23 1 110 177 111 173 7.97e-15 76.3
Msa1352240 MtrunA17_Chr1g0172611 41.844 141 80 1 75 213 52 192 1.02e-14 75.5
Msa1352240 MtrunA17_Chr1g0181581 45.455 88 40 1 105 192 103 182 1.03e-14 75.9
Msa1352240 MtrunA17_Chr6g0462191 47.436 156 76 3 74 229 57 206 2.42e-14 74.7
Msa1352240 MtrunA17_Chr4g0045641 41.667 84 43 1 124 207 144 221 7.72e-14 73.6
Msa1352240 MtrunA17_Chr7g0263731 40.000 135 72 3 73 207 58 183 3.88e-13 71.2
Msa1352240 MtrunA17_Chr1g0156121 47.222 72 38 0 128 199 126 197 3.88e-12 68.6
Msa1352240 MtrunA17_Chr5g0416161 34.409 93 47 1 98 190 105 183 8.69e-11 64.3
Msa1352240 MtrunA17_Chr2g0283321 44.776 67 37 0 122 188 59 125 9.56e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352240 AT3G16490.1 49.279 416 141 11 1 409 1 353 7.38e-95 291
Msa1352240 AT4G29150.1 45.578 441 150 18 1 420 17 388 4.18e-72 233
Msa1352240 AT1G51960.1 37.799 418 169 16 1 409 1 336 3.51e-49 171
Msa1352240 AT4G14750.2 38.255 298 103 10 125 416 163 385 9.28e-34 132
Msa1352240 AT4G14750.3 38.255 298 103 10 125 416 163 385 9.60e-34 132
Msa1352240 AT4G14750.1 37.919 298 104 11 125 416 104 326 1.46e-33 130
Msa1352240 AT4G23060.1 34.490 461 191 19 1 385 1 426 6.70e-31 124
Msa1352240 AT5G62070.1 34.826 402 177 13 7 385 3 342 1.71e-24 105
Msa1352240 AT5G07240.1 33.091 275 124 9 128 388 108 336 4.58e-21 95.1
Msa1352240 AT5G07240.2 33.091 275 124 9 128 388 154 382 1.05e-20 94.7
Msa1352240 AT4G10640.1 31.889 323 171 13 100 396 79 378 1.39e-20 94.0
Msa1352240 AT3G52290.1 57.759 116 47 1 75 190 59 172 1.81e-20 93.6
Msa1352240 AT1G01110.2 68.182 66 21 0 125 190 120 185 2.78e-20 94.0
Msa1352240 AT4G00820.1 68.182 66 21 0 125 190 131 196 9.53e-20 92.0
Msa1352240 AT5G03040.1 30.522 249 149 7 1 244 1 230 5.57e-19 89.4
Msa1352240 AT5G03040.3 30.522 249 149 7 1 244 1 230 5.57e-19 89.4
Msa1352240 AT5G03040.2 30.522 249 149 7 1 244 1 230 5.57e-19 89.4
Msa1352240 AT3G49380.1 39.865 148 78 4 84 224 66 209 5.92e-18 85.5
Msa1352240 AT3G49260.1 56.962 79 29 1 110 188 109 182 1.03e-17 85.5
Msa1352240 AT3G49260.4 56.962 79 29 1 110 188 109 182 1.03e-17 85.5
Msa1352240 AT3G49260.2 56.962 79 29 1 110 188 109 182 1.03e-17 85.5
Msa1352240 AT3G49260.3 56.962 79 29 1 110 188 109 182 1.11e-17 85.5
Msa1352240 AT1G72670.1 48.980 98 44 2 94 191 67 158 1.53e-17 84.7
Msa1352240 AT2G26180.1 60.811 74 26 2 104 177 65 135 3.97e-17 83.6
Msa1352240 AT3G22190.3 74.000 50 13 0 128 177 90 139 7.02e-16 79.7
Msa1352240 AT3G22190.2 74.000 50 13 0 128 177 90 139 7.02e-16 79.7
Msa1352240 AT3G22190.4 74.000 50 13 0 128 177 90 139 7.02e-16 79.7
Msa1352240 AT3G22190.1 74.000 50 13 0 128 177 90 139 7.02e-16 79.7
Msa1352240 AT1G74690.1 52.239 67 32 0 124 190 111 177 1.23e-15 79.7
Msa1352240 AT3G51380.1 59.375 64 26 0 125 188 36 99 1.51e-15 72.8
Msa1352240 AT1G17480.1 44.211 95 47 2 94 188 68 156 2.07e-15 77.8
Msa1352240 AT5G13460.1 55.224 67 29 1 119 184 103 169 5.42e-15 77.0
Msa1352240 AT1G14380.1 50.794 63 31 0 128 190 96 158 1.16e-14 76.6
Msa1352240 AT1G14380.3 50.794 63 31 0 128 190 96 158 1.16e-14 76.6
Msa1352240 AT1G14380.4 50.794 63 31 0 128 190 96 158 1.16e-14 76.6
Msa1352240 AT1G14380.6 46.479 71 38 0 120 190 88 158 1.32e-14 76.6
Msa1352240 AT1G14380.5 46.479 71 38 0 120 190 88 158 1.32e-14 76.6
Msa1352240 AT1G14380.2 46.479 71 38 0 120 190 88 158 1.32e-14 76.6
Msa1352240 AT1G14380.7 46.479 71 38 0 120 190 88 158 1.44e-14 76.3
Msa1352240 AT2G43680.1 48.529 68 35 0 125 192 322 389 2.32e-14 75.9
Msa1352240 AT2G43680.4 48.529 68 35 0 125 192 321 388 2.35e-14 75.9
Msa1352240 AT2G43680.2 48.529 68 35 0 125 192 321 388 2.35e-14 75.9
Msa1352240 AT2G43680.3 48.529 68 35 0 125 192 321 388 2.35e-14 75.9
Msa1352240 AT2G43680.5 48.529 68 35 0 125 192 321 388 2.35e-14 75.9
Msa1352240 AT5G03960.1 30.403 273 149 14 128 383 109 357 3.43e-14 74.3
Msa1352240 AT5G03960.3 30.403 273 149 14 128 383 110 358 3.64e-14 74.3
Msa1352240 AT5G03960.2 30.403 273 149 14 128 383 110 358 3.64e-14 74.3
Msa1352240 AT3G59690.2 44.595 74 41 0 129 202 172 245 3.91e-14 74.7
Msa1352240 AT3G59690.1 44.595 74 41 0 129 202 172 245 3.91e-14 74.7
Msa1352240 AT1G18840.1 28.962 183 95 4 124 271 107 289 4.63e-14 74.7
Msa1352240 AT1G18840.3 28.962 183 95 4 124 271 107 289 4.63e-14 74.7
Msa1352240 AT1G18840.2 28.962 183 95 4 124 271 107 289 4.63e-14 74.7
Msa1352240 AT2G26410.2 36.559 93 54 2 125 217 147 234 5.99e-12 68.2
Msa1352240 AT2G26410.1 36.559 93 54 2 125 217 147 234 5.99e-12 68.2

Find 144 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTTACCAATCCCTTTA+AGG 0.101147 tig0012581:+76550 None:intergenic
CTGAGTTCCATGGACAATTT+TGG 0.112398 tig0012581:-77662 Msa1352240:five_prime_UTR
TCAAGATTCAAACCACATTT+AGG 0.130899 tig0012581:-76842 Msa1352240:CDS
AATTATTTGTGTACTAATTT+TGG 0.133667 tig0012581:+78237 None:intergenic
AATACATCTATTTCAGATTT+TGG 0.146270 tig0012581:-76085 Msa1352240:CDS
TCTTGACAGCAGCAAATTTC+TGG 0.190866 tig0012581:+76859 None:intergenic
CTTCTTCTAGACCTTGATTT+TGG 0.205624 tig0012581:+76109 None:intergenic
AAAAGCACTAAGAGCCTTAA+AGG 0.206005 tig0012581:-76564 Msa1352240:CDS
ATCTTTCTTTCTTCTGAATA+TGG 0.215800 tig0012581:+78040 None:intergenic
ACAACCTGTTTCTTTGGTTT+AGG 0.236407 tig0012581:-77968 Msa1352240:five_prime_UTR
CAACCTGTTTCTTTGGTTTA+GGG 0.237920 tig0012581:-77967 Msa1352240:five_prime_UTR
GAGGTCTTGTTCACAGATTC+AGG 0.240656 tig0012581:-75672 Msa1352240:CDS
ACAATCACAACCTGTTTCTT+TGG 0.254531 tig0012581:-77974 Msa1352240:five_prime_UTR
TCGTTATAATTTCTTTGATT+TGG 0.255159 tig0012581:+75998 None:intergenic
TTCAATGAAAGCCTCTTCTT+TGG 0.256964 tig0012581:+75740 None:intergenic
AGTAATTTGCAGACATATAG+TGG 0.276513 tig0012581:-75451 Msa1352240:three_prime_UTR
CTCTTCTTTGGACCCGGTTC+AGG 0.283493 tig0012581:+75752 None:intergenic
CTTCTCAGTTTCTGAGTAGA+AGG 0.288946 tig0012581:+77019 None:intergenic
CAAGATTCAAACCACATTTA+GGG 0.295458 tig0012581:-76841 Msa1352240:CDS
AGGGCATAATAGGTAGTAGT+AGG 0.298325 tig0012581:-78154 Msa1352240:five_prime_UTR
CCCATTGGTTGTAGTGTTTG+AGG 0.307809 tig0012581:+77248 None:intergenic
CAAACTCTTGAACCACCTTA+TGG 0.313211 tig0012581:+77220 None:intergenic
GAATCAGATTGGGGAATAAC+AGG 0.318999 tig0012581:-75977 Msa1352240:CDS
AAGGATAATAACAATGATAA+TGG 0.323050 tig0012581:-75397 Msa1352240:three_prime_UTR
AGAAAGAAAGATGAATTATT+CGG 0.330471 tig0012581:-78029 Msa1352240:five_prime_UTR
GTGCAGTTAGAGGGCATAAT+AGG 0.331899 tig0012581:-78164 Msa1352240:five_prime_UTR
AGGTGGTTCAAGAGTTTGTT+TGG 0.341417 tig0012581:-77215 Msa1352240:CDS
TTTAAGGACAAGTCGCTCAT+AGG 0.358291 tig0012581:-77759 Msa1352240:five_prime_UTR
TCCGAAGCAACGACCTGAAC+CGG 0.358894 tig0012581:-75765 Msa1352240:CDS
AACACAAACAGTTATGATAT+TGG 0.363590 tig0012581:-76166 Msa1352240:CDS
ACAATCACAATGAGAGTAAC+AGG 0.363980 tig0012581:-76258 Msa1352240:CDS
AACCACATTTAGGGGTTACT+TGG 0.370720 tig0012581:-76832 Msa1352240:intron
TTCACCTGCAGAAGCTGCTT+GGG 0.371771 tig0012581:-77048 Msa1352240:CDS
TGTGTATTAGCCATGTAATT+AGG 0.372058 tig0012581:+75821 None:intergenic
CCCGGTTCAGGTCGTTGCTT+CGG 0.376126 tig0012581:+75764 None:intergenic
GAAGAAAGTGTTTGAAATGA+AGG 0.395473 tig0012581:+76055 None:intergenic
GAAATTATAACGAATCAGAT+TGG 0.399844 tig0012581:-75988 Msa1352240:CDS
TTTGAGAAATCTTCAGAAGA+TGG 0.404300 tig0012581:+77122 None:intergenic
GATAATCTTCTACTGTGAAT+AGG 0.405943 tig0012581:+76214 None:intergenic
GCTTTCATTGAATGAATTGA+TGG 0.408300 tig0012581:-75729 Msa1352240:CDS
AAAATAGTAGAAGTTGATAC+TGG 0.409751 tig0012581:-76136 Msa1352240:CDS
ATTCCCTAAACCAAAGAAAC+AGG 0.413296 tig0012581:+77964 None:intergenic
TGAAGAGTAGGTGCAGTTAG+AGG 0.415521 tig0012581:-78174 Msa1352240:five_prime_UTR
TCCACACCTAAAACAATTTG+TGG 0.416291 tig0012581:-75878 Msa1352240:CDS
CACGGCAGAGACACCATGTT+TGG 0.420310 tig0012581:-76891 Msa1352240:CDS
TGCTCAAGCTGCCGTGGCTG+TGG 0.423779 tig0012581:-76928 Msa1352240:CDS
CGCGGTAGTTCACCTTCCAT+TGG 0.427383 tig0012581:-75181 Msa1352240:three_prime_UTR
ACATATAGTGGGTAGGGAAC+AGG 0.432970 tig0012581:-75439 Msa1352240:three_prime_UTR
CACCTTATGGTTCTACCCAT+TGG 0.436819 tig0012581:+77233 None:intergenic
AAATTATAACGAATCAGATT+GGG 0.438371 tig0012581:-75987 Msa1352240:CDS
GAAGAGAAGTGAAACAGAAC+AGG 0.439533 tig0012581:+77690 None:intergenic
GGGCATAATAGGTAGTAGTA+GGG 0.440255 tig0012581:-78153 Msa1352240:five_prime_UTR
AGTAGTAGGGTGTGTGTTGG+AGG 0.449841 tig0012581:-78140 Msa1352240:five_prime_UTR
GGTGGTTCAAGAGTTTGTTT+GGG 0.450917 tig0012581:-77214 Msa1352240:CDS
GGTTGTAGTGTTTGAGGACT+TGG 0.452799 tig0012581:+77254 None:intergenic
TTTCACCTGCAGAAGCTGCT+TGG 0.462289 tig0012581:-77049 Msa1352240:CDS
CAAATTCTTCAAGTACCAAA+TGG 0.468429 tig0012581:-77163 Msa1352240:CDS
GATATATTTGTTACAAGGGA+AGG 0.474728 tig0012581:-77848 Msa1352240:five_prime_UTR
AGCAGCTGCAGATGCTGCTG+TGG 0.475597 tig0012581:-76955 Msa1352240:CDS
TCAGAAGATGGATGAGGAAG+AGG 0.481486 tig0012581:+77134 None:intergenic
AGGAAGAGGAGGATTCCATT+TGG 0.484441 tig0012581:+77148 None:intergenic
CATGGTGTCTCTGCCGTGGC+TGG 0.487332 tig0012581:+76896 None:intergenic
GAAGATGGATGAGGAAGAGG+AGG 0.491377 tig0012581:+77137 None:intergenic
GGCAGCTGCTCAAGCTGCCG+TGG 0.491635 tig0012581:-76934 Msa1352240:CDS
GAGGAGCAATGTCGTGTGTC+CGG 0.492422 tig0012581:-75557 Msa1352240:three_prime_UTR
AGCTTCTGCAGGTGAAATGT+TGG 0.492749 tig0012581:+77055 None:intergenic
ACTAAGAGCCTTAAAGGGAT+TGG 0.494308 tig0012581:-76558 Msa1352240:CDS
AAAGCACTAAGAGCCTTAAA+GGG 0.503582 tig0012581:-76563 Msa1352240:CDS
GAAAGCCTCTTCTTTGGACC+CGG 0.504577 tig0012581:+75746 None:intergenic
TTGCAGACATATAGTGGGTA+GGG 0.506722 tig0012581:-75445 Msa1352240:three_prime_UTR
TGTGTGTTGGAGGAGGAAAA+AGG 0.507103 tig0012581:-78130 Msa1352240:five_prime_UTR
ATGTTGGGAGGTATGGTAGC+TGG 0.507636 tig0012581:+77071 None:intergenic
TACGTATATAATTTCACTGT+GGG 0.510884 tig0012581:-77713 Msa1352240:five_prime_UTR
CGTTGCAGCGGCTACCGCAA+TGG 0.511750 tig0012581:+76980 None:intergenic
GCTTCTGCAGGTGAAATGTT+GGG 0.511883 tig0012581:+77056 None:intergenic
TTAAGGACAAGTCGCTCATA+GGG 0.512078 tig0012581:-77758 Msa1352240:five_prime_UTR
TCCTCAAACACTACAACCAA+TGG 0.516555 tig0012581:-77249 Msa1352240:exon
CATTGCGGTAGCCGCTGCAA+CGG 0.517072 tig0012581:-76979 Msa1352240:CDS
AAGTTGATATATTTGTTACA+AGG 0.522968 tig0012581:-77853 Msa1352240:five_prime_UTR
AGTAGGGTGTGTGTTGGAGG+AGG 0.526544 tig0012581:-78137 Msa1352240:five_prime_UTR
TGCAGCTGCTGCCGTTGCAG+CGG 0.526558 tig0012581:+76968 None:intergenic
AGGTGAAATGTTGGGAGGTA+TGG 0.527096 tig0012581:+77064 None:intergenic
GGATAAATCAAATTCTTGAA+AGG 0.527316 tig0012581:+77590 None:intergenic
TTCACAAGTTCATGTAGTTG+TGG 0.530100 tig0012581:-75914 Msa1352240:CDS
TGAACCCAAGCAGCTTCTGC+AGG 0.533983 tig0012581:+77044 None:intergenic
TGGTAATTATCCTAATTACA+TGG 0.537197 tig0012581:-75831 Msa1352240:CDS
TAATAATGAATGAAAATGTA+CGG 0.546083 tig0012581:+75365 None:intergenic
CTGGTGTCCACCACCAAACA+TGG 0.547498 tig0012581:+76878 None:intergenic
TTAGAGCACAAGCAACAGTA+AGG 0.547989 tig0012581:-76457 Msa1352240:CDS
AACCAATGGGTAGAACCATA+AGG 0.549465 tig0012581:-77235 Msa1352240:exon
AAAAGTTGTAAAAGAAGAAG+TGG 0.552962 tig0012581:+77624 None:intergenic
GAAGAGTAGGTGCAGTTAGA+GGG 0.554340 tig0012581:-78173 Msa1352240:five_prime_UTR
AGTTGATATATTTGTTACAA+GGG 0.554875 tig0012581:-77852 Msa1352240:five_prime_UTR
GAAAGACCCAAAATTGTCCA+TGG 0.555568 tig0012581:+77655 None:intergenic
TCAAGAATTTGATTTATCCA+AGG 0.556046 tig0012581:-77586 Msa1352240:intron
GGCAGAGACACCATGTTTGG+TGG 0.556180 tig0012581:-76888 Msa1352240:CDS
GGTAGTAGTAGGGTGTGTGT+TGG 0.557767 tig0012581:-78143 Msa1352240:five_prime_UTR
TGAGATGGAGTAACTTGAAG+TGG 0.559558 tig0012581:+76031 None:intergenic
CCTCAAACACTACAACCAAT+GGG 0.560238 tig0012581:-77248 Msa1352240:exon
TTTGGAATGTATAACTGAGA+TGG 0.561938 tig0012581:+76016 None:intergenic
ATACTGGAAGACCAAAATCA+AGG 0.569133 tig0012581:-76120 Msa1352240:CDS
ATATATTTGTTACAAGGGAA+GGG 0.570084 tig0012581:-77847 Msa1352240:five_prime_UTR
AAAGTTTCTATCAAAATCAG+TGG 0.570713 tig0012581:+75604 None:intergenic
TACGCGAATGCTTGTTTCCG+CGG 0.572613 tig0012581:-75199 Msa1352240:three_prime_UTR
GAATAAAAGCTAGTGTCCAA+TGG 0.576645 tig0012581:+75165 None:intergenic
AAATCTTCAGAAGATGGATG+AGG 0.576752 tig0012581:+77128 None:intergenic
TTTGCAGACATATAGTGGGT+AGG 0.577518 tig0012581:-75446 Msa1352240:three_prime_UTR
AAGAAAGTGTTTGAAATGAA+GGG 0.579860 tig0012581:+76056 None:intergenic
GTAAGGTCTCATAAATCTCG+TGG 0.580107 tig0012581:-76440 Msa1352240:CDS
CCGAAGCAACGACCTGAACC+GGG 0.581233 tig0012581:-75764 Msa1352240:CDS
AAAAGCTAGTGTCCAATGGA+AGG 0.582375 tig0012581:+75169 None:intergenic
GTAATTTGCAGACATATAGT+GGG 0.590203 tig0012581:-75450 Msa1352240:three_prime_UTR
GCAGAGGAGGTTGTGATCCG+AGG 0.590878 tig0012581:-75576 Msa1352240:exon
GAATCTAGAAACAGTTTGAG+TGG 0.595203 tig0012581:-75707 Msa1352240:CDS
CTGAACCGGGTCCAAAGAAG+AGG 0.595822 tig0012581:-75751 Msa1352240:CDS
AGTTGTAAAAGAAGAAGTGG+TGG 0.597309 tig0012581:+77627 None:intergenic
CTTCTACTCAGAAACTGAGA+AGG 0.603333 tig0012581:-77018 Msa1352240:CDS
TCAGAGTCTTTGCTTCAAAG+TGG 0.605537 tig0012581:-75526 Msa1352240:three_prime_UTR
AAGGGAAGGGAAGATTAACT+AGG 0.607980 tig0012581:-77834 Msa1352240:five_prime_UTR
AAGATTCAAACCACATTTAG+GGG 0.612338 tig0012581:-76840 Msa1352240:CDS
AATCAGATTGGGGAATAACA+GGG 0.619966 tig0012581:-75976 Msa1352240:CDS
AACAGGTTGTGATTGTGAGT+AGG 0.621297 tig0012581:+77981 None:intergenic
TTCTCAAAGAGAGATTCAAG+AGG 0.623344 tig0012581:-77107 Msa1352240:CDS
GCAAAACAAGCACGCCATTG+CGG 0.624569 tig0012581:-76994 Msa1352240:CDS
AATTATAACGAATCAGATTG+GGG 0.625222 tig0012581:-75986 Msa1352240:CDS
AAGTTACAAGCACTAGTGAG+AGG 0.625999 tig0012581:-76533 Msa1352240:CDS
TACCAAGTAACCCCTAAATG+TGG 0.626457 tig0012581:+76830 None:intergenic
AGAGACACCATGTTTGGTGG+TGG 0.631631 tig0012581:-76885 Msa1352240:CDS
CAAACATGGTGTCTCTGCCG+TGG 0.633256 tig0012581:+76892 None:intergenic
TGAGTGGAGTTAGAATGCAG+AGG 0.635623 tig0012581:-75691 Msa1352240:CDS
TAGTGAGAGGGTACTTAGTG+AGG 0.636507 tig0012581:-76520 Msa1352240:CDS
AACACAAGCAAGAAGATCCA+CGG 0.640199 tig0012581:-76375 Msa1352240:intron
GGACACACGACATTGCTCCT+CGG 0.643029 tig0012581:+75559 None:intergenic
AAAGACTCTGACATGGACAC+CGG 0.648041 tig0012581:+75538 None:intergenic
TTGAAGCAAAGACTCTGACA+TGG 0.648420 tig0012581:+75531 None:intergenic
CAATGGAAGGTGAACTACCG+CGG 0.661973 tig0012581:+75182 None:intergenic
AGTTACAAGCACTAGTGAGA+GGG 0.662861 tig0012581:-76532 Msa1352240:CDS
GGTTAGTCTAACCACAGCCA+CGG 0.665299 tig0012581:+76917 None:intergenic
ATCAGATTGGGGAATAACAG+GGG 0.680098 tig0012581:-75975 Msa1352240:CDS
GTGGTTAGACTAACCAGCCA+CGG 0.685200 tig0012581:-76909 Msa1352240:CDS
CTACATGAACTTGTGAAACG+TGG 0.697658 tig0012581:+75920 None:intergenic
TCTGCAGGTGAAATGTTGGG+AGG 0.713997 tig0012581:+77059 None:intergenic
CAATGGGTAGAACCATAAGG+TGG 0.722361 tig0012581:-77232 Msa1352240:CDS
ATACGTATATAATTTCACTG+TGG 0.732593 tig0012581:-77714 Msa1352240:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTTGTGTACTAATTT+TGG + tig0012581:75188-75207 None:intergenic 15.0%
!! TAATAATGAATGAAAATGTA+CGG + tig0012581:78060-78079 None:intergenic 15.0%
!!! TCTAAAAAGCTATCTTTTAT+TGG - tig0012581:75330-75349 Msa1352240:three_prime_UTR 20.0%
!! AGAAAGAAAGATGAATTATT+CGG - tig0012581:75393-75412 Msa1352240:three_prime_UTR 20.0%
!!! AAGTTGATATATTTGTTACA+AGG - tig0012581:75569-75588 Msa1352240:exon 20.0%
!!! AGTTGATATATTTGTTACAA+GGG - tig0012581:75570-75589 Msa1352240:exon 20.0%
!! TGTTTAATAGTAACATAACA+TGG - tig0012581:75891-75910 Msa1352240:CDS 20.0%
!!! GAAATTGGTTTTTCTATAAT+AGG - tig0012581:76831-76850 Msa1352240:intron 20.0%
!!! AATACATCTATTTCAGATTT+TGG - tig0012581:77337-77356 Msa1352240:intron 20.0%
!! TCGTTATAATTTCTTTGATT+TGG + tig0012581:77427-77446 None:intergenic 20.0%
!! AAATTATAACGAATCAGATT+GGG - tig0012581:77435-77454 Msa1352240:intron 20.0%
!! AAGGATAATAACAATGATAA+TGG - tig0012581:78025-78044 Msa1352240:five_prime_UTR 20.0%
!!! GTTAGTCAAGTTTTTTTTTT+AGG - tig0012581:78155-78174 Msa1352240:five_prime_UTR 20.0%
! GAGTAAAAAGAACAATGAAA+TGG - tig0012581:75208-75227 Msa1352240:three_prime_UTR 25.0%
! AAAGAAAAAAGATGAAGAGT+AGG - tig0012581:75236-75255 Msa1352240:three_prime_UTR 25.0%
! ATCTTTCTTTCTTCTGAATA+TGG + tig0012581:75385-75404 None:intergenic 25.0%
!! ATATATTTGTTACAAGGGAA+GGG - tig0012581:75575-75594 Msa1352240:exon 25.0%
!!! TGAGGTATCTATCTTTTTTA+AGG - tig0012581:75647-75666 Msa1352240:CDS 25.0%
! ATACGTATATAATTTCACTG+TGG - tig0012581:75708-75727 Msa1352240:CDS 25.0%
! TACGTATATAATTTCACTGT+GGG - tig0012581:75709-75728 Msa1352240:CDS 25.0%
! AAAAGTTGTAAAAGAAGAAG+TGG + tig0012581:75801-75820 None:intergenic 25.0%
! GGATAAATCAAATTCTTGAA+AGG + tig0012581:75835-75854 None:intergenic 25.0%
!! TCAAGAATTTGATTTATCCA+AGG - tig0012581:75836-75855 Msa1352240:CDS 25.0%
!! AGAATGTGAGAATTTGAAAT+TGG - tig0012581:76816-76835 Msa1352240:intron 25.0%
!!! TCTTATGATTGTTATTTTGC+AGG - tig0012581:77135-77154 Msa1352240:CDS 25.0%
! AACACAAACAGTTATGATAT+TGG - tig0012581:77256-77275 Msa1352240:five_prime_UTR 25.0%
!! GTATCAACTTCTACTATTTT+TGG + tig0012581:77286-77305 None:intergenic 25.0%
!!! AAAATAGTAGAAGTTGATAC+TGG - tig0012581:77286-77305 Msa1352240:five_prime_UTR 25.0%
!!! AAGAAAGTGTTTGAAATGAA+GGG + tig0012581:77369-77388 None:intergenic 25.0%
! GAAATTATAACGAATCAGAT+TGG - tig0012581:77434-77453 Msa1352240:intron 25.0%
! AATTATAACGAATCAGATTG+GGG - tig0012581:77436-77455 Msa1352240:intron 25.0%
!!! AGTTTTTACATTGGTGATTA+TGG - tig0012581:77571-77590 Msa1352240:intron 25.0%
! TGGTAATTATCCTAATTACA+TGG - tig0012581:77591-77610 Msa1352240:five_prime_UTR 25.0%
! AAAGTTTCTATCAAAATCAG+TGG + tig0012581:77821-77840 None:intergenic 25.0%
! TAAGTCAAGACAAAAATTGA+AGG - tig0012581:78006-78025 Msa1352240:five_prime_UTR 25.0%
! TTTCTATTTTCTCAGCTACT+TGG + tig0012581:75515-75534 None:intergenic 30.0%
! GATATATTTGTTACAAGGGA+AGG - tig0012581:75574-75593 Msa1352240:exon 30.0%
!!! TCAGATATTTTAAGACACTG+AGG - tig0012581:75629-75648 Msa1352240:CDS 30.0%
GTAGTAAAAAAGAATCACCT+TGG + tig0012581:75856-75875 None:intergenic 30.0%
! ATGTAATGTAGTTTTTCACG+AGG - tig0012581:76062-76081 Msa1352240:CDS 30.0%
!!! TGACTTGTTTGTGTTTTTGT+AGG - tig0012581:76110-76129 Msa1352240:CDS 30.0%
CAAATTCTTCAAGTACCAAA+TGG - tig0012581:76259-76278 Msa1352240:CDS 30.0%
TTTGAGAAATCTTCAGAAGA+TGG + tig0012581:76303-76322 None:intergenic 30.0%
TCAAGATTCAAACCACATTT+AGG - tig0012581:76580-76599 Msa1352240:intron 30.0%
CAAGATTCAAACCACATTTA+GGG - tig0012581:76581-76600 Msa1352240:intron 30.0%
AAGATTCAAACCACATTTAG+GGG - tig0012581:76582-76601 Msa1352240:intron 30.0%
TAACTTTACCAATCCCTTTA+AGG + tig0012581:76875-76894 None:intergenic 30.0%
! TCTGTTTATGTATTTTACCG+TGG + tig0012581:77067-77086 None:intergenic 30.0%
!!! TGATTGTTATTTTGCAGGAA+AGG - tig0012581:77140-77159 Msa1352240:CDS 30.0%
GATAATCTTCTACTGTGAAT+AGG + tig0012581:77211-77230 None:intergenic 30.0%
!! GAAGAAAGTGTTTGAAATGA+AGG + tig0012581:77370-77389 None:intergenic 30.0%
! TTTGGAATGTATAACTGAGA+TGG + tig0012581:77409-77428 None:intergenic 30.0%
! CTATCTCCACAAATTGTTTT+AGG + tig0012581:77553-77572 None:intergenic 30.0%
! TGTGGAGATAGTTTTTACAT+TGG - tig0012581:77562-77581 Msa1352240:intron 30.0%
TGTGTATTAGCCATGTAATT+AGG + tig0012581:77604-77623 None:intergenic 30.0%
!!! AGTCTTTTAAGGCTAAATTG+AGG - tig0012581:77623-77642 Msa1352240:five_prime_UTR 30.0%
GCTTTCATTGAATGAATTGA+TGG - tig0012581:77693-77712 Msa1352240:five_prime_UTR 30.0%
! ATAGAAACTTTTCAAAGCAG+AGG - tig0012581:77830-77849 Msa1352240:five_prime_UTR 30.0%
! AGTAATTTGCAGACATATAG+TGG - tig0012581:77971-77990 Msa1352240:five_prime_UTR 30.0%
! GTAATTTGCAGACATATAGT+GGG - tig0012581:77972-77991 Msa1352240:five_prime_UTR 30.0%
! ACAGTTCTGCTTCTTTTATT+TGG - tig0012581:78133-78152 Msa1352240:five_prime_UTR 30.0%
! ACAATCACAACCTGTTTCTT+TGG - tig0012581:75448-75467 Msa1352240:three_prime_UTR 35.0%
! ACAACCTGTTTCTTTGGTTT+AGG - tig0012581:75454-75473 Msa1352240:three_prime_UTR 35.0%
! CAACCTGTTTCTTTGGTTTA+GGG - tig0012581:75455-75474 Msa1352240:three_prime_UTR 35.0%
ATTCCCTAAACCAAAGAAAC+AGG + tig0012581:75461-75480 None:intergenic 35.0%
! TCTTCTTTTTCTGAGTTCCA+TGG - tig0012581:75750-75769 Msa1352240:CDS 35.0%
! TGAGTTCCATGGACAATTTT+GGG - tig0012581:75761-75780 Msa1352240:CDS 35.0%
AGTTGTAAAAGAAGAAGTGG+TGG + tig0012581:75798-75817 None:intergenic 35.0%
!! TTTTCACGAGGCATTTTCTT+TGG - tig0012581:76074-76093 Msa1352240:CDS 35.0%
AAATCTTCAGAAGATGGATG+AGG + tig0012581:76297-76316 None:intergenic 35.0%
TTCTCAAAGAGAGATTCAAG+AGG - tig0012581:76315-76334 Msa1352240:intron 35.0%
ACAAGTCAGATTCACATTCT+AGG - tig0012581:76694-76713 Msa1352240:intron 35.0%
!! AAAAGCACTAAGAGCCTTAA+AGG - tig0012581:76858-76877 Msa1352240:CDS 35.0%
! AAAGCACTAAGAGCCTTAAA+GGG - tig0012581:76859-76878 Msa1352240:CDS 35.0%
ACAATCACAATGAGAGTAAC+AGG - tig0012581:77164-77183 Msa1352240:CDS 35.0%
ATACTGGAAGACCAAAATCA+AGG - tig0012581:77302-77321 Msa1352240:intron 35.0%
! CTTCTTCTAGACCTTGATTT+TGG + tig0012581:77316-77335 None:intergenic 35.0%
AATCAGATTGGGGAATAACA+GGG - tig0012581:77446-77465 Msa1352240:intron 35.0%
TTCACAAGTTCATGTAGTTG+TGG - tig0012581:77508-77527 Msa1352240:intron 35.0%
!!! CAAATTGTTTTAGGTGTGGA+AGG + tig0012581:77544-77563 None:intergenic 35.0%
TCCACACCTAAAACAATTTG+TGG - tig0012581:77544-77563 Msa1352240:intron 35.0%
!!! TCCACAAATTGTTTTAGGTG+TGG + tig0012581:77548-77567 None:intergenic 35.0%
! GGCTAATACACAGTCTTTTA+AGG - tig0012581:77612-77631 Msa1352240:five_prime_UTR 35.0%
TTCAATGAAAGCCTCTTCTT+TGG + tig0012581:77685-77704 None:intergenic 35.0%
GAATCTAGAAACAGTTTGAG+TGG - tig0012581:77715-77734 Msa1352240:five_prime_UTR 35.0%
AGGGCATAATAGGTAGTAGT+AGG - tig0012581:75268-75287 Msa1352240:three_prime_UTR 40.0%
GGGCATAATAGGTAGTAGTA+GGG - tig0012581:75269-75288 Msa1352240:three_prime_UTR 40.0%
AACAGGTTGTGATTGTGAGT+AGG + tig0012581:75444-75463 None:intergenic 40.0%
AAGGGAAGGGAAGATTAACT+AGG - tig0012581:75588-75607 Msa1352240:CDS 40.0%
TTTAAGGACAAGTCGCTCAT+AGG - tig0012581:75663-75682 Msa1352240:CDS 40.0%
TTAAGGACAAGTCGCTCATA+GGG - tig0012581:75664-75683 Msa1352240:CDS 40.0%
GAAGAGAAGTGAAACAGAAC+AGG + tig0012581:75735-75754 None:intergenic 40.0%
! CTGAGTTCCATGGACAATTT+TGG - tig0012581:75760-75779 Msa1352240:CDS 40.0%
GAAAGACCCAAAATTGTCCA+TGG + tig0012581:75770-75789 None:intergenic 40.0%
AGAGTGTGACATTGCATTGT+GGG + tig0012581:75959-75978 None:intergenic 40.0%
TAGAGTGTGACATTGCATTG+TGG + tig0012581:75960-75979 None:intergenic 40.0%
!! AAAACACACCTCTGGAACAT+GGG + tig0012581:76038-76057 None:intergenic 40.0%
!! AAAAACACACCTCTGGAACA+TGG + tig0012581:76039-76058 None:intergenic 40.0%
ACATGACAAAAACACACCTC+TGG + tig0012581:76046-76065 None:intergenic 40.0%
TCCTCAAACACTACAACCAA+TGG - tig0012581:76173-76192 Msa1352240:CDS 40.0%
CCTCAAACACTACAACCAAT+GGG - tig0012581:76174-76193 Msa1352240:CDS 40.0%
AACCAATGGGTAGAACCATA+AGG - tig0012581:76187-76206 Msa1352240:CDS 40.0%
CAAACTCTTGAACCACCTTA+TGG + tig0012581:76205-76224 None:intergenic 40.0%
! AGGTGGTTCAAGAGTTTGTT+TGG - tig0012581:76207-76226 Msa1352240:CDS 40.0%
! GGTGGTTCAAGAGTTTGTTT+GGG - tig0012581:76208-76227 Msa1352240:CDS 40.0%
CTTCTCAGTTTCTGAGTAGA+AGG + tig0012581:76406-76425 None:intergenic 40.0%
CTTCTACTCAGAAACTGAGA+AGG - tig0012581:76404-76423 Msa1352240:CDS 40.0%
TCTTGACAGCAGCAAATTTC+TGG + tig0012581:76566-76585 None:intergenic 40.0%
AACCACATTTAGGGGTTACT+TGG - tig0012581:76590-76609 Msa1352240:intron 40.0%
TACCAAGTAACCCCTAAATG+TGG + tig0012581:76595-76614 None:intergenic 40.0%
ACTAAGAGCCTTAAAGGGAT+TGG - tig0012581:76864-76883 Msa1352240:CDS 40.0%
AAGTTACAAGCACTAGTGAG+AGG - tig0012581:76889-76908 Msa1352240:CDS 40.0%
AGTTACAAGCACTAGTGAGA+GGG - tig0012581:76890-76909 Msa1352240:CDS 40.0%
TTAGAGCACAAGCAACAGTA+AGG - tig0012581:76965-76984 Msa1352240:CDS 40.0%
GTAAGGTCTCATAAATCTCG+TGG - tig0012581:76982-77001 Msa1352240:CDS 40.0%
AACACAAGCAAGAAGATCCA+CGG - tig0012581:77047-77066 Msa1352240:CDS 40.0%
TGAGATGGAGTAACTTGAAG+TGG + tig0012581:77394-77413 None:intergenic 40.0%
GAATCAGATTGGGGAATAAC+AGG - tig0012581:77445-77464 Msa1352240:intron 40.0%
ATCAGATTGGGGAATAACAG+GGG - tig0012581:77447-77466 Msa1352240:intron 40.0%
! GGAAGAATGCAGATTTTCGA+CGG - tig0012581:77468-77487 Msa1352240:intron 40.0%
CTACATGAACTTGTGAAACG+TGG + tig0012581:77505-77524 None:intergenic 40.0%
! GAAACTTTTCAAAGCAGAGG+AGG - tig0012581:77833-77852 Msa1352240:five_prime_UTR 40.0%
TTGAAGCAAAGACTCTGACA+TGG + tig0012581:77894-77913 None:intergenic 40.0%
TCAGAGTCTTTGCTTCAAAG+TGG - tig0012581:77896-77915 Msa1352240:five_prime_UTR 40.0%
!! TTTGCAGACATATAGTGGGT+AGG - tig0012581:77976-77995 Msa1352240:five_prime_UTR 40.0%
!! TTGCAGACATATAGTGGGTA+GGG - tig0012581:77977-77996 Msa1352240:five_prime_UTR 40.0%
AAAAGCTAGTGTCCAATGGA+AGG + tig0012581:78256-78275 None:intergenic 40.0%
TGAAGAGTAGGTGCAGTTAG+AGG - tig0012581:75248-75267 Msa1352240:three_prime_UTR 45.0%
GAAGAGTAGGTGCAGTTAGA+GGG - tig0012581:75249-75268 Msa1352240:three_prime_UTR 45.0%
! GTGCAGTTAGAGGGCATAAT+AGG - tig0012581:75258-75277 Msa1352240:three_prime_UTR 45.0%
TGTGTGTTGGAGGAGGAAAA+AGG - tig0012581:75292-75311 Msa1352240:three_prime_UTR 45.0%
GAGTGTGACATTGCATTGTG+GGG + tig0012581:75958-75977 None:intergenic 45.0%
!! AAACACACCTCTGGAACATG+GGG + tig0012581:76037-76056 None:intergenic 45.0%
GGTTGTAGTGTTTGAGGACT+TGG + tig0012581:76171-76190 None:intergenic 45.0%
! CCCATTGGTTGTAGTGTTTG+AGG + tig0012581:76177-76196 None:intergenic 45.0%
! CACCTTATGGTTCTACCCAT+TGG + tig0012581:76192-76211 None:intergenic 45.0%
CAATGGGTAGAACCATAAGG+TGG - tig0012581:76190-76209 Msa1352240:CDS 45.0%
AGGAAGAGGAGGATTCCATT+TGG + tig0012581:76277-76296 None:intergenic 45.0%
TCAGAAGATGGATGAGGAAG+AGG + tig0012581:76291-76310 None:intergenic 45.0%
AGGTGAAATGTTGGGAGGTA+TGG + tig0012581:76361-76380 None:intergenic 45.0%
GCTTCTGCAGGTGAAATGTT+GGG + tig0012581:76369-76388 None:intergenic 45.0%
AGCTTCTGCAGGTGAAATGT+TGG + tig0012581:76370-76389 None:intergenic 45.0%
!! TAGTGAGAGGGTACTTAGTG+AGG - tig0012581:76902-76921 Msa1352240:CDS 45.0%
TGAGTGGAGTTAGAATGCAG+AGG - tig0012581:77731-77750 Msa1352240:five_prime_UTR 45.0%
!! GAGGTCTTGTTCACAGATTC+AGG - tig0012581:77750-77769 Msa1352240:five_prime_UTR 45.0%
AAAGACTCTGACATGGACAC+CGG + tig0012581:77887-77906 None:intergenic 45.0%
!! ACATATAGTGGGTAGGGAAC+AGG - tig0012581:77983-78002 Msa1352240:five_prime_UTR 45.0%
GGTAGTAGTAGGGTGTGTGT+TGG - tig0012581:75279-75298 Msa1352240:three_prime_UTR 50.0%
AGTAGTAGGGTGTGTGTTGG+AGG - tig0012581:75282-75301 Msa1352240:three_prime_UTR 50.0%
GAAGATGGATGAGGAAGAGG+AGG + tig0012581:76288-76307 None:intergenic 50.0%
! ATGTTGGGAGGTATGGTAGC+TGG + tig0012581:76354-76373 None:intergenic 50.0%
TCTGCAGGTGAAATGTTGGG+AGG + tig0012581:76366-76385 None:intergenic 50.0%
TTTCACCTGCAGAAGCTGCT+TGG - tig0012581:76373-76392 Msa1352240:intron 50.0%
TTCACCTGCAGAAGCTGCTT+GGG - tig0012581:76374-76393 Msa1352240:intron 50.0%
GCAAAACAAGCACGCCATTG+CGG - tig0012581:76428-76447 Msa1352240:CDS 50.0%
!! GGTTAGTCTAACCACAGCCA+CGG + tig0012581:76508-76527 None:intergenic 50.0%
GTGGTTAGACTAACCAGCCA+CGG - tig0012581:76513-76532 Msa1352240:CDS 50.0%
! AGAGACACCATGTTTGGTGG+TGG - tig0012581:76537-76556 Msa1352240:CDS 50.0%
GAAAGCCTCTTCTTTGGACC+CGG + tig0012581:77679-77698 None:intergenic 50.0%
TACGCGAATGCTTGTTTCCG+CGG - tig0012581:78223-78242 Msa1352240:five_prime_UTR 50.0%
CAATGGAAGGTGAACTACCG+CGG + tig0012581:78243-78262 None:intergenic 50.0%
AGTAGGGTGTGTGTTGGAGG+AGG - tig0012581:75285-75304 Msa1352240:three_prime_UTR 55.0%
CTGGAACATGGGGTGAAGCA+TGG + tig0012581:76027-76046 None:intergenic 55.0%
TGCTTCACCCCATGTTCCAG+AGG - tig0012581:76027-76046 Msa1352240:CDS 55.0%
TGAACCCAAGCAGCTTCTGC+AGG + tig0012581:76381-76400 None:intergenic 55.0%
CAAACATGGTGTCTCTGCCG+TGG + tig0012581:76533-76552 None:intergenic 55.0%
CACGGCAGAGACACCATGTT+TGG - tig0012581:76531-76550 Msa1352240:CDS 55.0%
GGCAGAGACACCATGTTTGG+TGG - tig0012581:76534-76553 Msa1352240:CDS 55.0%
CTGGTGTCCACCACCAAACA+TGG + tig0012581:76547-76566 None:intergenic 55.0%
TCCGAAGCAACGACCTGAAC+CGG - tig0012581:77657-77676 Msa1352240:five_prime_UTR 55.0%
CTCTTCTTTGGACCCGGTTC+AGG + tig0012581:77673-77692 None:intergenic 55.0%
CTGAACCGGGTCCAAAGAAG+AGG - tig0012581:77671-77690 Msa1352240:five_prime_UTR 55.0%
GGACACACGACATTGCTCCT+CGG + tig0012581:77866-77885 None:intergenic 55.0%
GAGGAGCAATGTCGTGTGTC+CGG - tig0012581:77865-77884 Msa1352240:five_prime_UTR 55.0%
CGCGGTAGTTCACCTTCCAT+TGG - tig0012581:78241-78260 Msa1352240:five_prime_UTR 55.0%
CATTGCGGTAGCCGCTGCAA+CGG - tig0012581:76443-76462 Msa1352240:CDS 60.0%
AGCAGCTGCAGATGCTGCTG+TGG - tig0012581:76467-76486 Msa1352240:CDS 60.0%
CCCGGTTCAGGTCGTTGCTT+CGG + tig0012581:77661-77680 None:intergenic 60.0%
CCGAAGCAACGACCTGAACC+GGG - tig0012581:77658-77677 Msa1352240:five_prime_UTR 60.0%
GCAGAGGAGGTTGTGATCCG+AGG - tig0012581:77846-77865 Msa1352240:five_prime_UTR 60.0%
CGTTGCAGCGGCTACCGCAA+TGG + tig0012581:76445-76464 None:intergenic 65.0%
TGCAGCTGCTGCCGTTGCAG+CGG + tig0012581:76457-76476 None:intergenic 65.0%
TGCTCAAGCTGCCGTGGCTG+TGG - tig0012581:76494-76513 Msa1352240:CDS 65.0%
CATGGTGTCTCTGCCGTGGC+TGG + tig0012581:76529-76548 None:intergenic 65.0%
GGCAGCTGCTCAAGCTGCCG+TGG - tig0012581:76488-76507 Msa1352240:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0012581 gene 75166 78278 75166 ID=Msa1352240;Name=Msa1352240
tig0012581 mRNA 75166 78278 75166 ID=Msa1352240-mRNA-1;Parent=Msa1352240;Name=Msa1352240-mRNA-1;_AED=0.03;_eAED=0.03;_QI=752|1|1|1|0.66|0.75|4|417|446
tig0012581 exon 75166 76287 75166 ID=Msa1352240-mRNA-1:exon:8059;Parent=Msa1352240-mRNA-1
tig0012581 exon 76376 76591 76376 ID=Msa1352240-mRNA-1:exon:8058;Parent=Msa1352240-mRNA-1
tig0012581 exon 76833 77312 76833 ID=Msa1352240-mRNA-1:exon:8057;Parent=Msa1352240-mRNA-1
tig0012581 exon 77587 78278 77587 ID=Msa1352240-mRNA-1:exon:8056;Parent=Msa1352240-mRNA-1
tig0012581 five_prime_UTR 77587 78278 77587 ID=Msa1352240-mRNA-1:five_prime_utr;Parent=Msa1352240-mRNA-1
tig0012581 five_prime_UTR 77253 77312 77253 ID=Msa1352240-mRNA-1:five_prime_utr;Parent=Msa1352240-mRNA-1
tig0012581 CDS 76833 77252 76833 ID=Msa1352240-mRNA-1:cds;Parent=Msa1352240-mRNA-1
tig0012581 CDS 76376 76591 76376 ID=Msa1352240-mRNA-1:cds;Parent=Msa1352240-mRNA-1
tig0012581 CDS 75583 76287 75583 ID=Msa1352240-mRNA-1:cds;Parent=Msa1352240-mRNA-1
tig0012581 three_prime_UTR 75166 75582 75166 ID=Msa1352240-mRNA-1:three_prime_utr;Parent=Msa1352240-mRNA-1
Gene Sequence

>Msa1352240

ATGGGTAGAACCATAAGGTGGTTCAAGAGTTTGTTTGGGATAAAGAAAGACAAAGATAATTCAAACTCAAATTCTTCAAGTACCAAATGGAATCCTCCTCTTCCTCATCCATCTTCTGAAGATTTCTCAAAGAGAGATTCAAGAGGCTTGTGTCATAATCCAGCTACCATACCTCCCAACATTTCACCTGCAGAAGCTGCTTGGGTTCAATCCTTCTACTCAGAAACTGAGAAGGAGCAAAACAAGCACGCCATTGCGGTAGCCGCTGCAACGGCAGCAGCTGCAGATGCTGCTGTGGCAGCTGCTCAAGCTGCCGTGGCTGTGGTTAGACTAACCAGCCACGGCAGAGACACCATGTTTGGTGGTGGACACCAGAAATTTGCTGCTGTCAAGATTCAAACCACATTTAGGGGTTACTTGGCAAGAAAAGCACTAAGAGCCTTAAAGGGATTGGTAAAGTTACAAGCACTAGTGAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACATTACACAGTATGCAAGCTCTAATTAGAGCACAAGCAACAGTAAGGTCTCATAAATCTCGTGGACTCATCATAAACACAAAGAATGAAACAAATAACAGATTTCAAACACAAGCAAGAAGATCCACGGAAAGGTACAATCACAATGAGAGTAACAGGAATGATTACACAGCTTCAATTCCTATTCACAGTAGAAGATTATCATCATCTTTTGATGCTACAATGAATAACACAAACAGTTATGATATTGGAAGTCCAAAAATAGTAGAAGTTGATACTGGAAGACCAAAATCAAGGTCTAGAAGAAGCAATACATCTATTTCAGATTTTGGAGATGACCCTTCATTTCAAACACTTTCTTCTCCACTTCAAGTTACTCCATCTCAGTTATACATTCCAAATCAAAGAAATTATAACGAATCAGATTGGGGAATAACAGGGGAAGAATGCAGATTTTCGACGGCACAGAGTACACCACGTTTCACAAGTTCATGTAGTTGTGGATTTGTTGCACCTTCCACACCTAAAACAATTTGTGGAGATAGTTTTTACATTGGTGATTATGGTAATTATCCTAATTACATGGCTAATACACAGTCTTTTAAGGCTAAATTGAGGTCTCATAGTGCTCCGAAGCAACGACCTGAACCGGGTCCAAAGAAGAGGCTTTCATTGAATGAATTGATGGAATCTAGAAACAGTTTGAGTGGAGTTAGAATGCAGAGGTCTTGTTCACAGATTCAGGATGCTATTAATTTTAAGAATGCTGTGATGAGTAAACTTGATAAGTCCACTGATTTTGATAGAAACTTTTCAAAGCAGAGGAGGTTGTGA
Protein sequence

>Msa1352240

MGRTIRWFKSLFGIKKDKDNSNSNSSSTKWNPPLPHPSSEDFSKRDSRGLCHNPATIPPNISPAEAAWVQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGGHQKFAAVKIQTTFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLIINTKNETNNRFQTQARRSTERYNHNESNRNDYTASIPIHSRRLSSSFDATMNNTNSYDIGSPKIVEVDTGRPKSRSRRSNTSISDFGDDPSFQTLSSPLQVTPSQLYIPNQRNYNESDWGITGEECRFSTAQSTPRFTSSCSCGFVAPSTPKTICGDSFYIGDYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKLDKSTDFDRNFSKQRRL*