AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0798080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0798080 MtrunA17_Chr5g0402371 94.083 169 5 2 1 168 1 165 3.03e-115 323
Msa0798080 MtrunA17_Chr4g0045021 41.722 151 66 5 26 164 1 141 3.01e-23 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0798080 AT5G66800.1 43.125 160 60 6 1 138 1 151 5.38e-31 110
Msa0798080 AT3G50640.1 37.121 132 69 3 21 138 7 138 2.06e-19 80.5
Msa0798080 AT4G34419.1 36.066 122 68 4 19 138 9 122 7.01e-14 65.1
Msa0798080 AT3G19200.1 41.284 109 53 6 26 129 15 117 1.25e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTTCTTGTTGTTTCA+TGG 0.185452 5_3:-10660142 None:intergenic
GGGTAGGTGGAAGGGTCTTT+TGG 0.224869 5_3:+10660368 Msa0798080:CDS
TTCACTCTTCTCAGCCTTCT+TGG 0.245592 5_3:-10660415 None:intergenic
TTAAATTGAGGTGGTTCATT+AGG 0.253017 5_3:-10660456 None:intergenic
CTTGTTGTTTCATGGCTTGT+TGG 0.326415 5_3:-10660134 None:intergenic
GAGTTCAAGTTACTAAGATT+TGG 0.338604 5_3:+10660774 Msa0798080:exon
TAAATTGAGGTGGTTCATTA+GGG 0.360337 5_3:-10660455 None:intergenic
AAGGAGATTCTTGGACTCAT+TGG 0.363558 5_3:-10660090 None:intergenic
TCAATTTAATTTCACTTCTC+AGG 0.373437 5_3:+10660470 Msa0798080:CDS
TGCATCTTATTATCTTTGTA+AGG 0.373486 5_3:-10660267 None:intergenic
TTGGAGATCCACAAAATCAT+TGG 0.391448 5_3:-10660115 None:intergenic
TTCTTGTCTTGTTGACAAGA+TGG 0.399653 5_3:+10660888 Msa0798080:three_prime_UTR
TAGGAACAATAAATTCTAGT+TGG 0.407021 5_3:-10659931 None:intergenic
GTAAGGCAACAATCTACCTT+TGG 0.420353 5_3:-10660250 None:intergenic
GTACAACTCATCCGAACAAA+AGG 0.429602 5_3:+10660038 Msa0798080:CDS
GGATGTTGGCATATAAGATA+TGG 0.432619 5_3:+10660795 Msa0798080:three_prime_UTR
TCATTGGAGAAGGAGATTCT+TGG 0.433399 5_3:-10660099 None:intergenic
AGTTACTAAGATTTGGATGT+TGG 0.446557 5_3:+10660781 Msa0798080:exon
AGGAACAATAAATTCTAGTT+GGG 0.448322 5_3:-10659930 None:intergenic
TCTTGTCTTGTTGACAAGAT+GGG 0.449044 5_3:+10660889 Msa0798080:three_prime_UTR
AAATGGATATGTGAGAAGTT+AGG 0.457342 5_3:-10659950 None:intergenic
CTTAGGAGGCCTTAAAGAAA+AGG 0.457709 5_3:-10660346 None:intergenic
ATACAGGAGGTGGCAAATGA+AGG 0.475602 5_3:+10660751 Msa0798080:intron
AGACCCTTCCACCTACCCTT+AGG 0.492979 5_3:-10660363 None:intergenic
CTTGTCTTGTTGACAAGATG+GGG 0.501224 5_3:+10660890 Msa0798080:three_prime_UTR
GGCATATAAGATATGGTTGA+AGG 0.502172 5_3:+10660802 Msa0798080:three_prime_UTR
GCCTCCTAAGGGTAGGTGGA+AGG 0.507774 5_3:+10660359 Msa0798080:CDS
CTTTAAGGCCTCCTAAGGGT+AGG 0.520677 5_3:+10660352 Msa0798080:CDS
CCTCCTAAGGGTAGGTGGAA+GGG 0.523056 5_3:+10660360 Msa0798080:CDS
TCAAAGTCAGAAGACACAAC+AGG 0.536157 5_3:-10660180 None:intergenic
TTGTTGACAAGATGGGGAAA+AGG 0.541256 5_3:+10660896 Msa0798080:three_prime_UTR
GATGTTGTTCTGAAATCTCA+TGG 0.545208 5_3:+10659999 Msa0798080:exon
ATCCACAAAATCATTGGAGA+AGG 0.554835 5_3:-10660109 None:intergenic
TACAGGAGGTGGCAAATGAA+GGG 0.568746 5_3:+10660752 Msa0798080:intron
CCCTTCCACCTACCCTTAGG+AGG 0.580007 5_3:-10660360 None:intergenic
TGAGAAGTGAAATTAAATTG+AGG 0.588827 5_3:-10660468 None:intergenic
AAGTCACATTGGTTCCAAGA+AGG 0.590892 5_3:+10660401 Msa0798080:CDS
TACAACTCATCCGAACAAAA+GGG 0.594040 5_3:+10660039 Msa0798080:CDS
GAAGTGAAATTAAATTGAGG+TGG 0.603907 5_3:-10660465 None:intergenic
TAAGGCCTCCTAAGGGTAGG+TGG 0.616107 5_3:+10660355 Msa0798080:CDS
AAGAAGGCTGAGAAGAGTGA+AGG 0.616835 5_3:+10660417 Msa0798080:CDS
TGACAAGATGGGGAAAAGGA+AGG 0.650846 5_3:+10660900 Msa0798080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAGAAAACACAAAA+TGG - chr5_3:10659970-10659989 None:intergenic 15.0%
!!! AACTAACATATTCTTTTTTT+TGG - chr5_3:10660666-10660685 None:intergenic 15.0%
!!! TAAGTAAAAAAGCTTTATTT+TGG + chr5_3:10660713-10660732 Msa0798080:intron 15.0%
!! ATTAAAAAGAAAACACAAAA+TGG - chr5_3:10659970-10659989 None:intergenic 15.0%
!!! AACTAACATATTCTTTTTTT+TGG - chr5_3:10660666-10660685 None:intergenic 15.0%
!!! TAAGTAAAAAAGCTTTATTT+TGG + chr5_3:10660713-10660732 Msa0798080:intron 15.0%
!!! AATATGATTCCTTTTCTTTA+AGG + chr5_3:10660337-10660356 Msa0798080:CDS 20.0%
!!! TAACATATTCTTTTTTTTGG+TGG - chr5_3:10660663-10660682 None:intergenic 20.0%
!!! GTTTTTATTTTTTGTGATAC+AGG + chr5_3:10660735-10660754 Msa0798080:intron 20.0%
!! AAGAGAAGAAAAAAAAAAGT+TGG - chr5_3:10660854-10660873 None:intergenic 20.0%
!!! TTTTTCTCTTTTTTCATGAT+TGG + chr5_3:10660943-10660962 Msa0798080:three_prime_UTR 20.0%
!!! TTTTCTCTTTTTTCATGATT+GGG + chr5_3:10660944-10660963 Msa0798080:three_prime_UTR 20.0%
!!! AATATGATTCCTTTTCTTTA+AGG + chr5_3:10660337-10660356 Msa0798080:CDS 20.0%
!!! TAACATATTCTTTTTTTTGG+TGG - chr5_3:10660663-10660682 None:intergenic 20.0%
!!! GTTTTTATTTTTTGTGATAC+AGG + chr5_3:10660735-10660754 Msa0798080:intron 20.0%
!! AAGAGAAGAAAAAAAAAAGT+TGG - chr5_3:10660854-10660873 None:intergenic 20.0%
!!! TTTTTCTCTTTTTTCATGAT+TGG + chr5_3:10660943-10660962 Msa0798080:three_prime_UTR 20.0%
!!! TTTTCTCTTTTTTCATGATT+GGG + chr5_3:10660944-10660963 Msa0798080:three_prime_UTR 20.0%
!! AGGAACAATAAATTCTAGTT+GGG - chr5_3:10659933-10659952 None:intergenic 25.0%
! TAGGAACAATAAATTCTAGT+TGG - chr5_3:10659934-10659953 None:intergenic 25.0%
! TGCATCTTATTATCTTTGTA+AGG - chr5_3:10660270-10660289 None:intergenic 25.0%
! TGAGAAGTGAAATTAAATTG+AGG - chr5_3:10660471-10660490 None:intergenic 25.0%
!! TCAATTTAATTTCACTTCTC+AGG + chr5_3:10660470-10660489 Msa0798080:CDS 25.0%
! TACATAATATATGCAAAGTC+CGG + chr5_3:10660623-10660642 Msa0798080:intron 25.0%
!!! TTTATTTTTTGTGATACAGG+AGG + chr5_3:10660738-10660757 Msa0798080:intron 25.0%
!! AGGAACAATAAATTCTAGTT+GGG - chr5_3:10659933-10659952 None:intergenic 25.0%
! TAGGAACAATAAATTCTAGT+TGG - chr5_3:10659934-10659953 None:intergenic 25.0%
! TGCATCTTATTATCTTTGTA+AGG - chr5_3:10660270-10660289 None:intergenic 25.0%
! TGAGAAGTGAAATTAAATTG+AGG - chr5_3:10660471-10660490 None:intergenic 25.0%
!! TCAATTTAATTTCACTTCTC+AGG + chr5_3:10660470-10660489 Msa0798080:CDS 25.0%
! TACATAATATATGCAAAGTC+CGG + chr5_3:10660623-10660642 Msa0798080:intron 25.0%
!!! TTTATTTTTTGTGATACAGG+AGG + chr5_3:10660738-10660757 Msa0798080:intron 25.0%
AAATGGATATGTGAGAAGTT+AGG - chr5_3:10659953-10659972 None:intergenic 30.0%
! ATTATGATGACCCTTTTGTT+CGG - chr5_3:10660052-10660071 None:intergenic 30.0%
!! TCTTCTTTCTTGTTGTTTCA+TGG - chr5_3:10660145-10660164 None:intergenic 30.0%
TAAATTGAGGTGGTTCATTA+GGG - chr5_3:10660458-10660477 None:intergenic 30.0%
TTAAATTGAGGTGGTTCATT+AGG - chr5_3:10660459-10660478 None:intergenic 30.0%
GAAGTGAAATTAAATTGAGG+TGG - chr5_3:10660468-10660487 None:intergenic 30.0%
! TGAAGTTAACTCAGTTGATA+AGG + chr5_3:10660596-10660615 Msa0798080:intron 30.0%
! GAGTTCAAGTTACTAAGATT+TGG + chr5_3:10660774-10660793 Msa0798080:exon 30.0%
AGTTACTAAGATTTGGATGT+TGG + chr5_3:10660781-10660800 Msa0798080:exon 30.0%
!!! AGGAAGTGTTGAATTTTTAG+AGG + chr5_3:10660822-10660841 Msa0798080:three_prime_UTR 30.0%
!! GTGTTGAATTTTTAGAGGAA+TGG + chr5_3:10660827-10660846 Msa0798080:three_prime_UTR 30.0%
!!! TCTTTTTTCATGATTGGGTT+TGG + chr5_3:10660949-10660968 Msa0798080:three_prime_UTR 30.0%
!!! CTTTTTTCATGATTGGGTTT+GGG + chr5_3:10660950-10660969 Msa0798080:three_prime_UTR 30.0%
!!! TTTTTTCATGATTGGGTTTG+GGG + chr5_3:10660951-10660970 Msa0798080:three_prime_UTR 30.0%
AAATGGATATGTGAGAAGTT+AGG - chr5_3:10659953-10659972 None:intergenic 30.0%
! ATTATGATGACCCTTTTGTT+CGG - chr5_3:10660052-10660071 None:intergenic 30.0%
!! TCTTCTTTCTTGTTGTTTCA+TGG - chr5_3:10660145-10660164 None:intergenic 30.0%
TAAATTGAGGTGGTTCATTA+GGG - chr5_3:10660458-10660477 None:intergenic 30.0%
TTAAATTGAGGTGGTTCATT+AGG - chr5_3:10660459-10660478 None:intergenic 30.0%
GAAGTGAAATTAAATTGAGG+TGG - chr5_3:10660468-10660487 None:intergenic 30.0%
! TGAAGTTAACTCAGTTGATA+AGG + chr5_3:10660596-10660615 Msa0798080:intron 30.0%
! GAGTTCAAGTTACTAAGATT+TGG + chr5_3:10660774-10660793 Msa0798080:exon 30.0%
AGTTACTAAGATTTGGATGT+TGG + chr5_3:10660781-10660800 Msa0798080:exon 30.0%
!!! AGGAAGTGTTGAATTTTTAG+AGG + chr5_3:10660822-10660841 Msa0798080:three_prime_UTR 30.0%
!! GTGTTGAATTTTTAGAGGAA+TGG + chr5_3:10660827-10660846 Msa0798080:three_prime_UTR 30.0%
!! GATGTTGTTCTGAAATCTCA+TGG + chr5_3:10659999-10660018 Msa0798080:exon 35.0%
TACAACTCATCCGAACAAAA+GGG + chr5_3:10660039-10660058 Msa0798080:CDS 35.0%
ATCCACAAAATCATTGGAGA+AGG - chr5_3:10660112-10660131 None:intergenic 35.0%
TTGGAGATCCACAAAATCAT+TGG - chr5_3:10660118-10660137 None:intergenic 35.0%
!!! TTTTCTTTAAGGCCTCCTAA+GGG + chr5_3:10660348-10660367 Msa0798080:CDS 35.0%
GGTCTTAGAAAAAGTCACAT+TGG + chr5_3:10660390-10660409 Msa0798080:CDS 35.0%
!!! TTCTTTTTTTTGGTGGTGAC+CGG - chr5_3:10660656-10660675 None:intergenic 35.0%
!!! ATTTTTTGTGATACAGGAGG+TGG + chr5_3:10660741-10660760 Msa0798080:intron 35.0%
GGATGTTGGCATATAAGATA+TGG + chr5_3:10660795-10660814 Msa0798080:three_prime_UTR 35.0%
GGCATATAAGATATGGTTGA+AGG + chr5_3:10660802-10660821 Msa0798080:three_prime_UTR 35.0%
! TTCTTGTCTTGTTGACAAGA+TGG + chr5_3:10660888-10660907 Msa0798080:three_prime_UTR 35.0%
! TCTTGTCTTGTTGACAAGAT+GGG + chr5_3:10660889-10660908 Msa0798080:three_prime_UTR 35.0%
!! GATGTTGTTCTGAAATCTCA+TGG + chr5_3:10659999-10660018 Msa0798080:exon 35.0%
TACAACTCATCCGAACAAAA+GGG + chr5_3:10660039-10660058 Msa0798080:CDS 35.0%
ATCCACAAAATCATTGGAGA+AGG - chr5_3:10660112-10660131 None:intergenic 35.0%
TTGGAGATCCACAAAATCAT+TGG - chr5_3:10660118-10660137 None:intergenic 35.0%
!!! TTTTCTTTAAGGCCTCCTAA+GGG + chr5_3:10660348-10660367 Msa0798080:CDS 35.0%
GGTCTTAGAAAAAGTCACAT+TGG + chr5_3:10660390-10660409 Msa0798080:CDS 35.0%
!!! TTCTTTTTTTTGGTGGTGAC+CGG - chr5_3:10660656-10660675 None:intergenic 35.0%
!!! ATTTTTTGTGATACAGGAGG+TGG + chr5_3:10660741-10660760 Msa0798080:intron 35.0%
GGATGTTGGCATATAAGATA+TGG + chr5_3:10660795-10660814 Msa0798080:three_prime_UTR 35.0%
GGCATATAAGATATGGTTGA+AGG + chr5_3:10660802-10660821 Msa0798080:three_prime_UTR 35.0%
! TTCTTGTCTTGTTGACAAGA+TGG + chr5_3:10660888-10660907 Msa0798080:three_prime_UTR 35.0%
! TCTTGTCTTGTTGACAAGAT+GGG + chr5_3:10660889-10660908 Msa0798080:three_prime_UTR 35.0%
GTACAACTCATCCGAACAAA+AGG + chr5_3:10660038-10660057 Msa0798080:CDS 40.0%
AAGGAGATTCTTGGACTCAT+TGG - chr5_3:10660093-10660112 None:intergenic 40.0%
TCATTGGAGAAGGAGATTCT+TGG - chr5_3:10660102-10660121 None:intergenic 40.0%
! CTCCTTCTCCAATGATTTTG+TGG + chr5_3:10660107-10660126 Msa0798080:CDS 40.0%
!! CTTGTTGTTTCATGGCTTGT+TGG - chr5_3:10660137-10660156 None:intergenic 40.0%
TCAAAGTCAGAAGACACAAC+AGG - chr5_3:10660183-10660202 None:intergenic 40.0%
! GCTGATGAACTTTTCTCCAA+AGG + chr5_3:10660234-10660253 Msa0798080:CDS 40.0%
GTAAGGCAACAATCTACCTT+TGG - chr5_3:10660253-10660272 None:intergenic 40.0%
CTTAGGAGGCCTTAAAGAAA+AGG - chr5_3:10660349-10660368 None:intergenic 40.0%
!!! CTTTTCTTTAAGGCCTCCTA+AGG + chr5_3:10660347-10660366 Msa0798080:CDS 40.0%
!! AAGTCACATTGGTTCCAAGA+AGG + chr5_3:10660401-10660420 Msa0798080:CDS 40.0%
!!! TCTTTTTTTTGGTGGTGACC+GGG - chr5_3:10660655-10660674 None:intergenic 40.0%
! CTTGTCTTGTTGACAAGATG+GGG + chr5_3:10660890-10660909 Msa0798080:three_prime_UTR 40.0%
TTGTTGACAAGATGGGGAAA+AGG + chr5_3:10660896-10660915 Msa0798080:three_prime_UTR 40.0%
GTACAACTCATCCGAACAAA+AGG + chr5_3:10660038-10660057 Msa0798080:CDS 40.0%
AAGGAGATTCTTGGACTCAT+TGG - chr5_3:10660093-10660112 None:intergenic 40.0%
TCATTGGAGAAGGAGATTCT+TGG - chr5_3:10660102-10660121 None:intergenic 40.0%
! CTCCTTCTCCAATGATTTTG+TGG + chr5_3:10660107-10660126 Msa0798080:CDS 40.0%
!! CTTGTTGTTTCATGGCTTGT+TGG - chr5_3:10660137-10660156 None:intergenic 40.0%
TCAAAGTCAGAAGACACAAC+AGG - chr5_3:10660183-10660202 None:intergenic 40.0%
! GCTGATGAACTTTTCTCCAA+AGG + chr5_3:10660234-10660253 Msa0798080:CDS 40.0%
GTAAGGCAACAATCTACCTT+TGG - chr5_3:10660253-10660272 None:intergenic 40.0%
CTTAGGAGGCCTTAAAGAAA+AGG - chr5_3:10660349-10660368 None:intergenic 40.0%
!!! CTTTTCTTTAAGGCCTCCTA+AGG + chr5_3:10660347-10660366 Msa0798080:CDS 40.0%
!! AAGTCACATTGGTTCCAAGA+AGG + chr5_3:10660401-10660420 Msa0798080:CDS 40.0%
!!! TCTTTTTTTTGGTGGTGACC+GGG - chr5_3:10660655-10660674 None:intergenic 40.0%
! CTTGTCTTGTTGACAAGATG+GGG + chr5_3:10660890-10660909 Msa0798080:three_prime_UTR 40.0%
TTGTTGACAAGATGGGGAAA+AGG + chr5_3:10660896-10660915 Msa0798080:three_prime_UTR 40.0%
TTCACTCTTCTCAGCCTTCT+TGG - chr5_3:10660418-10660437 None:intergenic 45.0%
AAGAAGGCTGAGAAGAGTGA+AGG + chr5_3:10660417-10660436 Msa0798080:CDS 45.0%
ATACAGGAGGTGGCAAATGA+AGG + chr5_3:10660751-10660770 Msa0798080:intron 45.0%
TACAGGAGGTGGCAAATGAA+GGG + chr5_3:10660752-10660771 Msa0798080:intron 45.0%
TGACAAGATGGGGAAAAGGA+AGG + chr5_3:10660900-10660919 Msa0798080:three_prime_UTR 45.0%
TTCACTCTTCTCAGCCTTCT+TGG - chr5_3:10660418-10660437 None:intergenic 45.0%
AAGAAGGCTGAGAAGAGTGA+AGG + chr5_3:10660417-10660436 Msa0798080:CDS 45.0%
ATACAGGAGGTGGCAAATGA+AGG + chr5_3:10660751-10660770 Msa0798080:intron 45.0%
TACAGGAGGTGGCAAATGAA+GGG + chr5_3:10660752-10660771 Msa0798080:intron 45.0%
TGACAAGATGGGGAAAAGGA+AGG + chr5_3:10660900-10660919 Msa0798080:three_prime_UTR 45.0%
!! TAAATAAATAAATAAAAAGT+TGG - chr5_3:10660524-10660543 None:intergenic 5.0%
!!! TTTTATTTATTTATTTACTT+TGG + chr5_3:10660527-10660546 Msa0798080:intron 5.0%
!! TAAATAAATAAATAAAAAGT+TGG - chr5_3:10660524-10660543 None:intergenic 5.0%
!!! TTTTATTTATTTATTTACTT+TGG + chr5_3:10660527-10660546 Msa0798080:intron 5.0%
!! CTTTAAGGCCTCCTAAGGGT+AGG + chr5_3:10660352-10660371 Msa0798080:CDS 50.0%
! GGTAGGTGGAAGGGTCTTTT+GGG + chr5_3:10660369-10660388 Msa0798080:CDS 50.0%
TGCAAAGTCCGGAGTTTACC+CGG + chr5_3:10660634-10660653 Msa0798080:intron 50.0%
!! CTTTAAGGCCTCCTAAGGGT+AGG + chr5_3:10660352-10660371 Msa0798080:CDS 50.0%
! GGTAGGTGGAAGGGTCTTTT+GGG + chr5_3:10660369-10660388 Msa0798080:CDS 50.0%
TGCAAAGTCCGGAGTTTACC+CGG + chr5_3:10660634-10660653 Msa0798080:intron 50.0%
TAAGGCCTCCTAAGGGTAGG+TGG + chr5_3:10660355-10660374 Msa0798080:CDS 55.0%
CCTCCTAAGGGTAGGTGGAA+GGG + chr5_3:10660360-10660379 Msa0798080:CDS 55.0%
AGACCCTTCCACCTACCCTT+AGG - chr5_3:10660366-10660385 None:intergenic 55.0%
! GGGTAGGTGGAAGGGTCTTT+TGG + chr5_3:10660368-10660387 Msa0798080:CDS 55.0%
TAAGGCCTCCTAAGGGTAGG+TGG + chr5_3:10660355-10660374 Msa0798080:CDS 55.0%
CCTCCTAAGGGTAGGTGGAA+GGG + chr5_3:10660360-10660379 Msa0798080:CDS 55.0%
AGACCCTTCCACCTACCCTT+AGG - chr5_3:10660366-10660385 None:intergenic 55.0%
! GGGTAGGTGGAAGGGTCTTT+TGG + chr5_3:10660368-10660387 Msa0798080:CDS 55.0%
GCCTCCTAAGGGTAGGTGGA+AGG + chr5_3:10660359-10660378 Msa0798080:CDS 60.0%
CCCTTCCACCTACCCTTAGG+AGG - chr5_3:10660363-10660382 None:intergenic 60.0%
GGTGGTGACCGGGTAAACTC+CGG - chr5_3:10660645-10660664 None:intergenic 60.0%
GCCTCCTAAGGGTAGGTGGA+AGG + chr5_3:10660359-10660378 Msa0798080:CDS 60.0%
CCCTTCCACCTACCCTTAGG+AGG - chr5_3:10660363-10660382 None:intergenic 60.0%
GGTGGTGACCGGGTAAACTC+CGG - chr5_3:10660645-10660664 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 10659925 10660970 10659925 ID=Msa0798080;Name=Msa0798080
chr5_3 mRNA 10659925 10660970 10659925 ID=Msa0798080-mRNA-1;Parent=Msa0798080;Name=Msa0798080-mRNA-1;_AED=0.01;_eAED=0.01;_QI=93|1|1|1|1|1|2|181|168
chr5_3 exon 10659925 10660491 10659925 ID=Msa0798080-mRNA-1:exon:4414;Parent=Msa0798080-mRNA-1
chr5_3 exon 10660757 10660970 10660757 ID=Msa0798080-mRNA-1:exon:4415;Parent=Msa0798080-mRNA-1
chr5_3 five_prime_UTR 10659925 10660017 10659925 ID=Msa0798080-mRNA-1:five_prime_utr;Parent=Msa0798080-mRNA-1
chr5_3 CDS 10660018 10660491 10660018 ID=Msa0798080-mRNA-1:cds;Parent=Msa0798080-mRNA-1
chr5_3 CDS 10660757 10660789 10660757 ID=Msa0798080-mRNA-1:cds;Parent=Msa0798080-mRNA-1
chr5_3 three_prime_UTR 10660790 10660970 10660790 ID=Msa0798080-mRNA-1:three_prime_utr;Parent=Msa0798080-mRNA-1
Gene Sequence

>Msa0798080

ATGGCAAGTTTAGACATGATGTACAACTCATCCGAACAAAAGGGTCATCATAATAATAATCATCATTGTGCTCCAATGAGTCCAAGAATCTCCTTCTCCAATGATTTTGTGGATCTCCAACAAGCCATGAAACAACAAGAAAGAAGATCAGACACACACATACCTGTTGTGTCTTCTGACTTTGAATTTTCTGTCACTAACTACTCAATGATGAGTGCTGATGAACTTTTCTCCAAAGGTAGATTGTTGCCTTACAAAGATAATAAGATGCAAAGAGCTACTACTACTCTTAAACAAGAGCTTCTTCATAATGATGATGAATATGATTCCTTTTCTTTAAGGCCTCCTAAGGGTAGGTGGAAGGGTCTTTTGGGTCTTAGAAAAAGTCACATTGGTTCCAAGAAGGCTGAGAAGAGTGAAGGTTCTCATCAAAGAAGCCCTAATGAACCACCTCAATTTAATTTCACTTCTCAGGAGGTGGCAAATGAAGGGAGTTCAAGTTACTAA
Protein sequence

>Msa0798080

MASLDMMYNSSEQKGHHNNNHHCAPMSPRISFSNDFVDLQQAMKQQERRSDTHIPVVSSDFEFSVTNYSMMSADELFSKGRLLPYKDNKMQRATTTLKQELLHNDDEYDSFSLRPPKGRWKGLLGLRKSHIGSKKAEKSEGSHQRSPNEPPQFNFTSQEVANEGSSSY*