AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0335740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0335740 MtrunA17_Chr2g0320921 91.736 847 53 4 1 834 1 843 0.0 1499
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0335740 AT5G22640.1 49.880 832 358 12 32 821 50 864 0.0 751
Msa0335740 AT5G22640.2 60.922 499 181 3 32 520 50 544 0.0 645
Msa0335740 AT5G22640.3 51.196 627 249 11 237 821 2 613 0.0 567

Find 222 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGCCATTCTCTCTCTTC+TGG 0.161520 2_4:+54826819 None:intergenic
GGACTGGTGCTTCGGTGTTT+TGG 0.162576 2_4:+54830054 None:intergenic
CCATTCATCCCTCTCATAAT+AGG 0.203599 2_4:+54826746 None:intergenic
TGAACCTTACTTCATAAAAT+TGG 0.221404 2_4:+54824526 None:intergenic
TTGAGAGAGCTTTGGGATAA+TGG 0.233445 2_4:-54829870 Msa0335740:CDS
TGTTACAGGTTCCTGATTAC+TGG 0.234389 2_4:-54824437 Msa0335740:intron
GGTTTGATAACCTAGGAAAA+TGG 0.251822 2_4:-54823545 Msa0335740:CDS
AATTCTTCAATAACATCTTT+AGG 0.263590 2_4:+54829675 None:intergenic
GAAAATTAGTGAAATGAAAA+AGG 0.269320 2_4:-54823508 Msa0335740:CDS
GATATTGCACCATCGAGTTT+TGG 0.272261 2_4:-54823270 Msa0335740:CDS
TGAGAGAGCTTTGGGATAAT+GGG 0.275118 2_4:-54829869 Msa0335740:CDS
ACTAATCATTCTGCTATTAA+AGG 0.278113 2_4:-54829699 Msa0335740:CDS
CGGCTTTCAGCCTACCCTTT+TGG 0.278462 2_4:+54822152 None:intergenic
CTGAAGGGAAGATAATAAAA+AGG 0.282694 2_4:-54826854 Msa0335740:CDS
TTATTTACTTAGCGGTAAAT+AGG 0.287909 2_4:+54830332 None:intergenic
TTCCTATAAGGAAGATAAAA+AGG 0.292162 2_4:+54829741 None:intergenic
TAAAGATGTTATTGAAGAAT+TGG 0.297588 2_4:-54829673 Msa0335740:CDS
GATGAATGGGTTAAGGAGTT+TGG 0.301803 2_4:-54826732 Msa0335740:CDS
TGAGGTTCTCTTTGGATGTT+TGG 0.305532 2_4:+54821911 None:intergenic
TTGTTAAGCAGGACAAATTC+AGG 0.305982 2_4:+54823846 None:intergenic
ATTTGAAGTGAGGTTCTCTT+TGG 0.308838 2_4:+54821903 None:intergenic
TGTGAAGTGGAAGCATTATA+AGG 0.309843 2_4:-54829784 Msa0335740:CDS
CTACATTAATTAAACTTGAA+TGG 0.311924 2_4:-54830304 Msa0335740:five_prime_UTR
CATTCATCCCTCTCATAATA+GGG 0.321040 2_4:+54826747 None:intergenic
TGGCAACCACCTTTGCAAAA+AGG 0.323564 2_4:-54823696 Msa0335740:CDS
GTCAGTTTCCCTCCTGTGAT+TGG 0.326869 2_4:-54822175 Msa0335740:CDS
AGAAGATTTGAGAGAGCTTT+GGG 0.329983 2_4:-54829877 Msa0335740:CDS
TTAGATATGAAGGAACTCTT+TGG 0.332618 2_4:-54828568 Msa0335740:intron
AATGATTGTTGCAGCTTTGA+TGG 0.333289 2_4:+54822286 None:intergenic
TGCAACAATCATTTCCATTC+TGG 0.336605 2_4:-54822276 Msa0335740:CDS
TCTTTCCAATTCTCATCATC+AGG 0.337468 2_4:+54829900 None:intergenic
TAAGGTTGGTTGTTGTTTGC+GGG 0.343226 2_4:+54830232 None:intergenic
GTTGAGTCAAGAAGTTATTC+AGG 0.343371 2_4:-54822109 Msa0335740:CDS
ACTTCAAATTTAAGCTTTGA+AGG 0.350865 2_4:-54821889 Msa0335740:exon
CAAGCCATTCTCTCTCTTCT+GGG 0.352645 2_4:+54826820 None:intergenic
AAGAAGATTTGAGAGAGCTT+TGG 0.357631 2_4:-54829878 Msa0335740:CDS
GCTAGTGAAGTTGTAGAAAA+TGG 0.357700 2_4:+54823192 None:intergenic
TAATTAAACTTGAATGGAAC+TGG 0.357988 2_4:-54830298 Msa0335740:five_prime_UTR
TTAGTAGGTACAGGAGGAAT+AGG 0.360057 2_4:+54829717 None:intergenic
TCTGGGTCGAATTCGGAGGC+TGG 0.360552 2_4:+54830032 None:intergenic
TTCCACCTGATGATGAGAAT+TGG 0.360876 2_4:-54829905 Msa0335740:CDS
TGAGAAAGTTGACCCTAAAA+AGG 0.365613 2_4:-54823673 Msa0335740:CDS
GATAGAAGCTGAATTATGTT+TGG 0.365778 2_4:-54823460 Msa0335740:CDS
AATGGGAATAACACCATTAC+TGG 0.371101 2_4:-54829852 Msa0335740:CDS
TAGATATGAAGGAACTCTTT+GGG 0.377987 2_4:-54828567 Msa0335740:CDS
CGGGTCTTCAGGGTCAGGCT+CGG 0.378073 2_4:+54823818 None:intergenic
CCCTCCTGTGATTGGCCAAA+AGG 0.382992 2_4:-54822167 Msa0335740:CDS
TGTAGAAAATGGTGATTTGC+CGG 0.385046 2_4:+54823203 None:intergenic
TGAGAGGGATGAATGGGTTA+AGG 0.388463 2_4:-54826739 Msa0335740:CDS
TTCGACATCGAGGTCGTCTT+GGG 0.388583 2_4:+54830100 None:intergenic
TTTCAGCTGCACGCTGGTAT+AGG 0.396522 2_4:-54825753 Msa0335740:intron
GATAGTTATCTTCTTGCAAA+TGG 0.399040 2_4:-54826783 Msa0335740:CDS
TATTTAATACCGCTGAAGTT+TGG 0.403494 2_4:+54825862 None:intergenic
TTAATAGCAGAATGATTAGT+AGG 0.408842 2_4:+54829702 None:intergenic
GGAGGAATAGGTTTCCTATA+AGG 0.411609 2_4:+54829729 None:intergenic
TCGAATTCGGAGGCTGGGAC+TGG 0.415203 2_4:+54830038 None:intergenic
TTGGAGTCGGAGGGTGGTGG+TGG 0.417529 2_4:+54830173 None:intergenic
GAGAAACATTGTTGAAGATA+AGG 0.420184 2_4:+54830214 None:intergenic
CTCATCCTTCACACTCCAAC+CGG 0.421667 2_4:-54823768 Msa0335740:CDS
CCTGTTATAGAACCTGTTCC+CGG 0.424006 2_4:-54826998 Msa0335740:CDS
ATTCGACATCGAGGTCGTCT+TGG 0.429381 2_4:+54830099 None:intergenic
GCATGCTGTGGATCATTATA+CGG 0.429585 2_4:+54824597 None:intergenic
CCGGGAACAGGTTCTATAAC+AGG 0.430966 2_4:+54826998 None:intergenic
TATGTTTGGAAGAGGCCATT+GGG 0.431358 2_4:-54823446 Msa0335740:CDS
GTTTGATAACCTAGGAAAAT+GGG 0.431396 2_4:-54823544 Msa0335740:CDS
GGAGGCTGGGACTGGTGCTT+CGG 0.434212 2_4:+54830046 None:intergenic
ATCTTGTTTGACTACAGAAC+CGG 0.434750 2_4:+54823344 None:intergenic
TCAATAACACCATGACCCTC+TGG 0.435554 2_4:+54827031 None:intergenic
TTTGACGGGTCTTCAGGGTC+AGG 0.438983 2_4:+54823813 None:intergenic
ACATACTTGGACCCGGGAAC+AGG 0.442435 2_4:+54826986 None:intergenic
AATATGGAATACGTATGTTC+TGG 0.442630 2_4:-54823716 Msa0335740:CDS
GGGTCTTCAGGGTCAGGCTC+GGG 0.442845 2_4:+54823819 None:intergenic
TAGATAAATTATTTACTTAG+CGG 0.444917 2_4:+54830324 None:intergenic
TTTCTATATCATAGGTATGA+AGG 0.446030 2_4:-54827073 Msa0335740:intron
TGCCAGCTGAGTTGGAATAC+TGG 0.446775 2_4:-54824335 Msa0335740:CDS
TATGTCGAGGATGAGAAATA+TGG 0.449653 2_4:-54823732 Msa0335740:CDS
CACCATTACTGGTACTGGTT+GGG 0.454895 2_4:-54829841 Msa0335740:CDS
AATAACACCATTACTGGTAC+TGG 0.456394 2_4:-54829846 Msa0335740:CDS
GATACCTATGCCAGCTGAGT+TGG 0.457310 2_4:-54824343 Msa0335740:CDS
GATCCAACCTTGTTCCAGAA+TGG 0.459069 2_4:+54822262 None:intergenic
AACATTGTTGAAGATAAGGT+TGG 0.462424 2_4:+54830218 None:intergenic
TCCTCAGGCGTAGCAAAAGC+AGG 0.464185 2_4:+54829816 None:intergenic
CTTCTCCAGATGGACTTGTC+AGG 0.467032 2_4:-54828514 Msa0335740:intron
GGATGAGTCGGAGTCGGAAT+CGG 0.467762 2_4:+54830142 None:intergenic
ATAAGGTTGGTTGTTGTTTG+CGG 0.468497 2_4:+54830231 None:intergenic
TCATCAGGTGGAAAATCAAA+CGG 0.471502 2_4:+54829915 None:intergenic
ATGTTGTCTAAATCCCTCTC+TGG 0.472786 2_4:+54821974 None:intergenic
GATGATATTGCTCAAGGAAA+AGG 0.473909 2_4:-54828545 Msa0335740:CDS
CACAACTCACCGCAGAGATA+AGG 0.476851 2_4:+54823154 None:intergenic
ATTGCGTAGAAGAGAGAAAG+AGG 0.477384 2_4:-54823409 Msa0335740:CDS
CCTATTATGAGAGGGATGAA+TGG 0.477757 2_4:-54826746 Msa0335740:CDS
GCAGAATGATTAGTAGGTAC+AGG 0.480235 2_4:+54829708 None:intergenic
TTCACATATTCCCATTCCTC+AGG 0.482160 2_4:+54829801 None:intergenic
TCATATGTGTCACACTTTGT+TGG 0.485177 2_4:+54821667 None:intergenic
CAGCTGGCATAGGTATCCTA+AGG 0.486521 2_4:+54824349 None:intergenic
AAATAATGCATTATGCATAC+AGG 0.486979 2_4:+54821729 None:intergenic
CTTTCTATAGATCTCCCCTT+AGG 0.487320 2_4:-54824365 Msa0335740:CDS
GTGAAGTGGAAGCATTATAA+GGG 0.489573 2_4:-54829783 Msa0335740:CDS
GCTCGGGTTCCTTGTTAAGC+AGG 0.489747 2_4:+54823835 None:intergenic
CCTCCTGTGATTGGCCAAAA+GGG 0.490125 2_4:-54822166 Msa0335740:CDS
GGAAGAGGCCATTGGGGACA+TGG 0.491646 2_4:-54823439 Msa0335740:CDS
ACAAACCTGACAAGTCCATC+TGG 0.492218 2_4:+54828509 None:intergenic
GACATAATTGATGATAAATC+CGG 0.492776 2_4:+54823749 None:intergenic
CTGGGTCGAATTCGGAGGCT+GGG 0.494605 2_4:+54830033 None:intergenic
TAAAATTGGTTAATGAAGCC+AGG 0.495775 2_4:+54824540 None:intergenic
CTATTATGAGAGGGATGAAT+GGG 0.496621 2_4:-54826745 Msa0335740:CDS
TTGAAGTCCCCTATTATGAG+AGG 0.496719 2_4:-54826755 Msa0335740:CDS
AGAGAGAGAATGGCTTGATA+AGG 0.498294 2_4:-54826814 Msa0335740:CDS
CTAAACATCATACTTCCATC+TGG 0.499339 2_4:+54825690 None:intergenic
TAGGTTATCAAACCATGGCT+TGG 0.500218 2_4:+54823554 None:intergenic
GATTGAAGAGTTTCTCAAAT+GGG 0.501735 2_4:-54829646 Msa0335740:CDS
AGCTGAATTATGTTTGGAAG+AGG 0.502575 2_4:-54823454 Msa0335740:CDS
TTTCCATTCTGGAACAAGGT+TGG 0.503912 2_4:-54822265 Msa0335740:CDS
GTTCACAAACATGCGAGCCT+TGG 0.504894 2_4:+54825716 None:intergenic
GAACCGGTATCATCTTCATC+TGG 0.507816 2_4:+54823360 None:intergenic
TTATGTTTGGAAGAGGCCAT+TGG 0.510151 2_4:-54823447 Msa0335740:CDS
GAAGAAGCAATGCGAGCTGA+AGG 0.512756 2_4:-54826870 Msa0335740:CDS
GGATTGAAGAGTTTCTCAAA+TGG 0.515739 2_4:-54829647 Msa0335740:CDS
ATCATTTCCATTCTGGAACA+AGG 0.521145 2_4:-54822269 Msa0335740:CDS
TGTCCCCAGAAGAGAGAGAA+TGG 0.525180 2_4:-54826824 Msa0335740:CDS
ACACCATTACTGGTACTGGT+TGG 0.525319 2_4:-54829842 Msa0335740:CDS
CTTCATCTTCTTCATCTACA+CGG 0.528670 2_4:+54823313 None:intergenic
ATACGCGCATGAAGTAGATC+AGG 0.529667 2_4:-54824409 Msa0335740:CDS
ATCAGCGATGTGAAAACAGC+TGG 0.530970 2_4:-54822202 Msa0335740:CDS
CTTTGGGATGATATTGCTCA+AGG 0.531578 2_4:-54828551 Msa0335740:CDS
TTCATCTTCTTCATCTACAC+GGG 0.533739 2_4:+54823314 None:intergenic
AAAGGTCGCTATCGTTATGC+TGG 0.534373 2_4:-54826585 Msa0335740:CDS
CATCAGGTGGAAAATCAAAC+GGG 0.534536 2_4:+54829916 None:intergenic
TGAGTCGGAGTCGGAATCGG+AGG 0.534988 2_4:+54830145 None:intergenic
GCTGCATGCGGCACCAGAGA+GGG 0.535166 2_4:-54821987 Msa0335740:CDS
CAGCATGCTTACTTGTATGA+AGG 0.538200 2_4:-54824582 Msa0335740:CDS
CAAAGCTTAAATTTGAAGTG+AGG 0.539205 2_4:+54821893 None:intergenic
ATCATAGGTATGAAGGTGAA+TGG 0.539261 2_4:-54827066 Msa0335740:intron
AGGTGAAGTTGCTGCTGCCA+AGG 0.539918 2_4:-54825733 Msa0335740:CDS
TGAAGAAGATGAAGATGATG+AGG 0.540232 2_4:-54823304 Msa0335740:CDS
GGTTTCTGATTCTGCGTCGG+AGG 0.541799 2_4:+54830121 None:intergenic
CAGATATACATACTTGGACC+CGG 0.543991 2_4:+54826979 None:intergenic
GTAGAAAATGGTGATTTGCC+GGG 0.546033 2_4:+54823204 None:intergenic
ATGTTATTGAAGAATTGGAT+AGG 0.546328 2_4:-54829668 Msa0335740:CDS
CACCAGTATTCCAACTCAGC+TGG 0.548245 2_4:+54824333 None:intergenic
GGTGTTTATACTTCTCCAGA+TGG 0.549999 2_4:-54828524 Msa0335740:CDS
TTGGGTTTCTGATTCTGCGT+CGG 0.552974 2_4:+54830118 None:intergenic
ATGAAGCATGGGAGGATGCA+TGG 0.553835 2_4:-54826558 Msa0335740:CDS
CTGTTATAGAACCTGTTCCC+GGG 0.558902 2_4:-54826997 Msa0335740:CDS
TGCTTACTTGTATGAAGGAG+AGG 0.559972 2_4:-54824577 Msa0335740:CDS
GAGTCGGAGTCGGAATCGGA+GGG 0.563257 2_4:+54830146 None:intergenic
TGAATTTGTCCTGCTTAACA+AGG 0.563327 2_4:-54823844 Msa0335740:CDS
AGTGTGACACATATGACAAA+TGG 0.568279 2_4:-54821660 Msa0335740:three_prime_UTR
AACAAGGTTGGATCAAAACC+AGG 0.568503 2_4:-54822253 Msa0335740:CDS
TTCCAATTCTCATCATCAGG+TGG 0.569444 2_4:+54829903 None:intergenic
CAATAACACCATGACCCTCT+GGG 0.570495 2_4:+54827032 None:intergenic
TTCTGCGTCGGAGGATGAGT+CGG 0.571987 2_4:+54830130 None:intergenic
GAGGATGTGTGGATGGCACC+TGG 0.574763 2_4:-54824558 Msa0335740:CDS
TTCAGGTGGGAGATTTCTTG+AGG 0.575981 2_4:-54822092 Msa0335740:CDS
AGAAATATTGGATGATGATG+AGG 0.576592 2_4:-54825895 Msa0335740:CDS
GAAATATTGGATGATGATGA+GGG 0.577055 2_4:-54825894 Msa0335740:CDS
TATTCCAACTCAGCTGGCAT+AGG 0.578083 2_4:+54824339 None:intergenic
TTGGAATACTGGTGGTCCAA+AGG 0.580088 2_4:-54824324 Msa0335740:intron
ATCAAAGACAGATCAGCAGA+AGG 0.580464 2_4:-54823232 Msa0335740:CDS
AAGCTTAAGACGCTCCCATA+CGG 0.582795 2_4:+54823593 None:intergenic
TATGCTGGTCAGATGAAGCA+TGG 0.583444 2_4:-54826570 Msa0335740:CDS
CGAAACGACCCAGAGGGTCA+TGG 0.583757 2_4:-54827040 Msa0335740:CDS
TTGTTCTGGGTCGAATTCGG+AGG 0.585869 2_4:+54830028 None:intergenic
ATGTGATCAATGTGTTGCGC+AGG 0.586670 2_4:+54822223 None:intergenic
TGTATGAAGGAGAGGATGTG+TGG 0.586754 2_4:-54824569 Msa0335740:CDS
GATCAGCAGAAGGGAAAACC+CGG 0.587447 2_4:-54823222 Msa0335740:CDS
CTGTGATTGGCCAAAAGGGT+AGG 0.593200 2_4:-54822162 Msa0335740:CDS
TTTCCTAGGTTATCAAACCA+TGG 0.593326 2_4:+54823549 None:intergenic
GAGTCAAGAAGTTATTCAGG+TGG 0.594211 2_4:-54822106 Msa0335740:CDS
TTGCCAGATGAAGATGATAC+CGG 0.595416 2_4:-54823363 Msa0335740:CDS
CATGGGAGGATGCATGGATG+TGG 0.599968 2_4:-54826552 Msa0335740:CDS
TAACTCTTCCATGTCCCCAA+TGG 0.600348 2_4:+54823431 None:intergenic
TGAAGTCCCCTATTATGAGA+GGG 0.600859 2_4:-54826754 Msa0335740:CDS
AGATATACATACTTGGACCC+GGG 0.601167 2_4:+54826980 None:intergenic
GTCCCAACCAGTACCAGTAA+TGG 0.601866 2_4:+54829839 None:intergenic
TCAAAGACAGATCAGCAGAA+GGG 0.602574 2_4:-54823231 Msa0335740:CDS
AAGAAGCAATGCGAGCTGAA+GGG 0.605218 2_4:-54826869 Msa0335740:CDS
AGTCAAGAAGTTATTCAGGT+GGG 0.607587 2_4:-54822105 Msa0335740:CDS
TAATTGATGATAAATCCGGT+TGG 0.607681 2_4:+54823753 None:intergenic
TCAATAGACCCAAAACTCGA+TGG 0.608158 2_4:+54823261 None:intergenic
TCAAAAGAGCGAAGAATGAG+TGG 0.612655 2_4:-54822019 Msa0335740:CDS
AGCTGGCATAGGTATCCTAA+GGG 0.613587 2_4:+54824350 None:intergenic
TTCTAGCAGCCTTATCTCTG+CGG 0.613883 2_4:-54823163 Msa0335740:intron
GGCTGCATGCGGCACCAGAG+AGG 0.614419 2_4:-54821988 Msa0335740:CDS
GTCGGAGGATGAGTCGGAGT+CGG 0.616817 2_4:+54830136 None:intergenic
ATTTATCATCAATTATGTCG+AGG 0.618144 2_4:-54823745 Msa0335740:CDS
ATGCTGGTCAGATGAAGCAT+GGG 0.619110 2_4:-54826569 Msa0335740:CDS
TCCTTCGTGTCTCTATGCCG+AGG 0.619254 2_4:+54821808 None:intergenic
TGGCAACATGTGGCTGCATG+CGG 0.619737 2_4:-54821999 Msa0335740:CDS
TGTTGCGCAGGAACTAACCC+TGG 0.620055 2_4:+54822235 None:intergenic
GAATGATTAGTAGGTACAGG+AGG 0.622571 2_4:+54829711 None:intergenic
AGTCATCATAACCATCGGGT+AGG 0.627073 2_4:+54823643 None:intergenic
TAGATCAGGAAAGAGAAATG+TGG 0.627095 2_4:-54824395 Msa0335740:CDS
ATGTTTGTGAACAAGCCAGA+TGG 0.628868 2_4:-54825705 Msa0335740:CDS
TGTCAATTTCAGCTGCACGC+TGG 0.629404 2_4:-54825759 Msa0335740:intron
GTTGGAGTGTGAAGGATGAG+AGG 0.631119 2_4:+54823771 None:intergenic
ATTCATCCCTCTCATAATAG+GGG 0.633266 2_4:+54826748 None:intergenic
TGAAGGAGAGGATGTGTGGA+TGG 0.635250 2_4:-54824565 Msa0335740:CDS
TCATACAAGTAAGCATGCTG+TGG 0.635472 2_4:+54824585 None:intergenic
ATGTTTGGAAGAGGCCATTG+GGG 0.639745 2_4:-54823445 Msa0335740:CDS
AAGCCATTCTCTCTCTTCTG+GGG 0.643213 2_4:+54826821 None:intergenic
CGGTCGAGTCTGAGACATAG+AGG 0.649168 2_4:+54822066 None:intergenic
AAGGGTAGGCTGAAAGCCGT+CGG 0.650840 2_4:-54822148 Msa0335740:CDS
AGGAATGGGAATATGTGAAG+TGG 0.653783 2_4:-54829797 Msa0335740:CDS
GCCTCGGCATAGAGACACGA+AGG 0.653928 2_4:-54821809 Msa0335740:three_prime_UTR
AAGGCTATATTCCTACCCGA+TGG 0.656178 2_4:-54823654 Msa0335740:CDS
CCTCAGGCGTAGCAAAAGCA+GGG 0.658702 2_4:+54829817 None:intergenic
CTGGTCAGATGAAGCATGGG+AGG 0.660225 2_4:-54826566 Msa0335740:CDS
AAGCCATGGTTTGATAACCT+AGG 0.662376 2_4:-54823552 Msa0335740:CDS
AGTCGGAGTCGGAATCGGAG+GGG 0.663708 2_4:+54830147 None:intergenic
TTAAGCAGGACAAATTCAGG+AGG 0.663739 2_4:+54823849 None:intergenic
TGGTTTCGAAACGACCCAGA+GGG 0.666508 2_4:-54827046 Msa0335740:CDS
TAAATCCGGTTGGAGTGTGA+AGG 0.671748 2_4:+54823763 None:intergenic
GTCAAAACTCATATATACTG+AGG 0.684772 2_4:-54823796 Msa0335740:CDS
GAAGAATGAGTGGCAACATG+TGG 0.687291 2_4:-54822009 Msa0335740:CDS
ATGTGATGACCAAACTTCAG+CGG 0.697886 2_4:-54825871 Msa0335740:intron
TGAGATAAGATTCGACATCG+AGG 0.702508 2_4:+54830090 None:intergenic
CAGCTGAGTTGGAATACTGG+TGG 0.706946 2_4:-54824332 Msa0335740:CDS
ACAAGGTTGGATCAAAACCA+GGG 0.708459 2_4:-54822252 Msa0335740:CDS
ATGGTTTCGAAACGACCCAG+AGG 0.719076 2_4:-54827047 Msa0335740:CDS
GCTGGCATAGGTATCCTAAG+GGG 0.735218 2_4:+54824351 None:intergenic
GCAGTGGTTAGAGAAAAGAG+AGG 0.769842 2_4:-54824621 Msa0335740:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACCTTTTATTAAAATAA+TGG + chr2_4:54823680-54823699 None:intergenic 10.0%
!!! CTTTTCAAATTTATAAAAAA+AGG - chr2_4:54825546-54825565 Msa0335740:intron 10.0%
!! TTTCAAATTTATAAAAAAAG+GGG - chr2_4:54825548-54825567 Msa0335740:intron 10.0%
!!! ACTTTTTTAAGATAAAAATA+AGG - chr2_4:54825584-54825603 Msa0335740:intron 10.0%
!! TAATAAATATAAAAGAAAAG+AGG + chr2_4:54826035-54826054 None:intergenic 10.0%
!!! GATTTTAATATTCAATAATT+TGG + chr2_4:54827978-54827997 None:intergenic 10.0%
!! TAGATAAATTATTTACTTAG+CGG + chr2_4:54821665-54821684 None:intergenic 15.0%
!! TTAACAACTTACTATAAATT+TGG + chr2_4:54822952-54822971 None:intergenic 15.0%
!! AGATTATAAATATTTCGAAA+AGG + chr2_4:54823043-54823062 None:intergenic 15.0%
!! TTCGAAATATTTATAATCTT+AGG - chr2_4:54823044-54823063 Msa0335740:intron 15.0%
!! TCGAAATATTTATAATCTTA+GGG - chr2_4:54823045-54823064 Msa0335740:intron 15.0%
!!! TAAGCCATTATTTTAATAAA+AGG - chr2_4:54823673-54823692 Msa0335740:CDS 15.0%
!!! ATATACTAATATACATGTTT+TGG - chr2_4:54824551-54824570 Msa0335740:CDS 15.0%
!! TTCAAATTTATAAAAAAAGG+GGG - chr2_4:54825549-54825568 Msa0335740:intron 15.0%
!!! TAGTTTAAAAGTTTTTTACA+CGG - chr2_4:54825627-54825646 Msa0335740:intron 15.0%
!!! TTTGAGTTAAAAATGTATAA+AGG + chr2_4:54825871-54825890 None:intergenic 15.0%
!!! ATTTTATTTTGGAGAAATAT+TGG - chr2_4:54826079-54826098 Msa0335740:intron 15.0%
!! AATAATATTAGTAATTTGAG+AGG - chr2_4:54826170-54826189 Msa0335740:intron 15.0%
!! TATATTTATTCAATACCAAT+TGG - chr2_4:54826947-54826966 Msa0335740:intron 15.0%
!!! TATATACAAACCTTTATTTT+CGG - chr2_4:54826974-54826993 Msa0335740:intron 15.0%
!! AAAAAAAAACTGTAACAAAT+GGG + chr2_4:54827697-54827716 None:intergenic 15.0%
!! AAAAAAAAAACTGTAACAAA+TGG + chr2_4:54827698-54827717 None:intergenic 15.0%
!!! GTTACAGTTTTTTTTTTTTT+TGG - chr2_4:54827701-54827720 Msa0335740:intron 15.0%
!!! TATCAAAAATGATTTTTAAC+AGG + chr2_4:54827860-54827879 None:intergenic 15.0%
!!! TTAAAAAGTGATTTTCATTA+TGG - chr2_4:54827895-54827914 Msa0335740:intron 15.0%
!! TCAAAGAATAATACAAAAAT+TGG + chr2_4:54828919-54828938 None:intergenic 15.0%
!! AAATTGACATACAAAATAAT+TGG - chr2_4:54829103-54829122 Msa0335740:intron 15.0%
!! CTACATTAATTAAACTTGAA+TGG - chr2_4:54821682-54821701 Msa0335740:three_prime_UTR 20.0%
!!! GTAGTATTTTTGAACTTTTT+CGG + chr2_4:54822015-54822034 None:intergenic 20.0%
!! AATTCTTCAATAACATCTTT+AGG + chr2_4:54822314-54822333 None:intergenic 20.0%
!! TAAAGATGTTATTGAAGAAT+TGG - chr2_4:54822313-54822332 Msa0335740:intron 20.0%
!! AACACAATATTTATCTATGT+AGG - chr2_4:54822761-54822780 Msa0335740:intron 20.0%
!! ACACAATATTTATCTATGTA+GGG - chr2_4:54822762-54822781 Msa0335740:intron 20.0%
!! GATTATGAATACTTCATAAA+TGG - chr2_4:54822841-54822860 Msa0335740:intron 20.0%
!! TAGTAAGTTGTTAAAATACA+AGG - chr2_4:54822958-54822977 Msa0335740:intron 20.0%
!! TTAAGCAAATAGTTATTGTT+CGG - chr2_4:54823176-54823195 Msa0335740:CDS 20.0%
!!! AATAGGCATTTGTTTTTAAA+GGG + chr2_4:54823330-54823349 None:intergenic 20.0%
!!! AAATAGGCATTTGTTTTTAA+AGG + chr2_4:54823331-54823350 None:intergenic 20.0%
!!! TGCTAAATTTTTAGATATGA+AGG - chr2_4:54823408-54823427 Msa0335740:CDS 20.0%
!! AATAAGCTGAAAACAATTTA+TGG - chr2_4:54823744-54823763 Msa0335740:CDS 20.0%
!! ATTACTTGGAAATTTGATAT+AGG - chr2_4:54824189-54824208 Msa0335740:intron 20.0%
!!! AACTTTGATGATGATATATT+TGG - chr2_4:54824336-54824355 Msa0335740:CDS 20.0%
!!! ACTTTGATGATGATATATTT+GGG - chr2_4:54824337-54824356 Msa0335740:CDS 20.0%
!! CAGTAAATTAATTATGCTTA+TGG - chr2_4:54825842-54825861 Msa0335740:intron 20.0%
!! GAATGAAATATAAGCAAAAA+AGG + chr2_4:54826536-54826555 None:intergenic 20.0%
!!! TTTTTGCTTATATTTCATTC+CGG - chr2_4:54826536-54826555 Msa0335740:intron 20.0%
!!! TTGGTATTGATATGTTTAAA+TGG + chr2_4:54826618-54826637 None:intergenic 20.0%
!! AGAAAACATAAAACCAAAAA+GGG + chr2_4:54826919-54826938 None:intergenic 20.0%
!!! ATATACAAACCTTTATTTTC+GGG - chr2_4:54826975-54826994 Msa0335740:intron 20.0%
!!! TTAATATGCATGTTGATTAT+TGG - chr2_4:54827224-54827243 Msa0335740:intron 20.0%
!! TAACAAGATTAAAAACAGTA+TGG + chr2_4:54827314-54827333 None:intergenic 20.0%
!!! TTAACCAATTTTATGAAGTA+AGG - chr2_4:54827456-54827475 Msa0335740:intron 20.0%
!!! TTTTGAAAATCTGTAACAAA+CGG + chr2_4:54827779-54827798 None:intergenic 20.0%
!! GAAAATTAGTGAAATGAAAA+AGG - chr2_4:54828478-54828497 Msa0335740:intron 20.0%
!! ACAAAACATATATACACTAA+AGG + chr2_4:54829483-54829502 None:intergenic 20.0%
!!! AATATTTTATCGTTGTCATT+TGG - chr2_4:54829666-54829685 Msa0335740:CDS 20.0%
!!! ATGCATAATGCATTATTTTT+TGG - chr2_4:54830262-54830281 Msa0335740:five_prime_UTR 20.0%
! TTATTTACTTAGCGGTAAAT+AGG + chr2_4:54821657-54821676 None:intergenic 25.0%
! TAATTAAACTTGAATGGAAC+TGG - chr2_4:54821688-54821707 Msa0335740:three_prime_UTR 25.0%
! TTCCTATAAGGAAGATAAAA+AGG + chr2_4:54822248-54822267 None:intergenic 25.0%
! TTAATAGCAGAATGATTAGT+AGG + chr2_4:54822287-54822306 None:intergenic 25.0%
! ACTAATCATTCTGCTATTAA+AGG - chr2_4:54822287-54822306 Msa0335740:CDS 25.0%
! ATGTTATTGAAGAATTGGAT+AGG - chr2_4:54822318-54822337 Msa0335740:intron 25.0%
! TAACAACTAAGTTGTACTTA+CGG + chr2_4:54822464-54822483 None:intergenic 25.0%
! CATAGATAAATATTGTGTTC+TGG + chr2_4:54822760-54822779 None:intergenic 25.0%
! TTAACGACTCATTATCAATT+AGG + chr2_4:54822985-54823004 None:intergenic 25.0%
!! TACAAAATAAGAGACTAGTT+TGG - chr2_4:54823086-54823105 Msa0335740:intron 25.0%
! TTTAGTACAATATTGTCGAA+TGG - chr2_4:54823209-54823228 Msa0335740:CDS 25.0%
! TGCATAGAAGAATTTAAACA+AGG - chr2_4:54823249-54823268 Msa0335740:CDS 25.0%
! GCATAGAAGAATTTAAACAA+GGG - chr2_4:54823250-54823269 Msa0335740:CDS 25.0%
!!! TTGTTTTTGCTACATTGTTT+TGG - chr2_4:54823496-54823515 Msa0335740:CDS 25.0%
! TAGTTATGCTTAAATGGTTT+AGG - chr2_4:54823536-54823555 Msa0335740:CDS 25.0%
!!! AAGTTTTGTTAGTTAAACAC+AGG - chr2_4:54824052-54824071 Msa0335740:intron 25.0%
!!! TACTAATATACATGTTTTGG+TGG - chr2_4:54824554-54824573 Msa0335740:CDS 25.0%
!!! ACTAATATACATGTTTTGGT+GGG - chr2_4:54824555-54824574 Msa0335740:CDS 25.0%
!!! AAGTTCTGTCACTTTTTTTT+GGG + chr2_4:54824686-54824705 None:intergenic 25.0%
!! CAGTGTATTTTCTATATCAT+AGG - chr2_4:54824905-54824924 Msa0335740:intron 25.0%
! TTTCTATATCATAGGTATGA+AGG - chr2_4:54824913-54824932 Msa0335740:intron 25.0%
!! TTGAACACAATTTTAAACTG+TGG + chr2_4:54825048-54825067 None:intergenic 25.0%
! TGAAGGGAAGATAATAAAAA+GGG - chr2_4:54825133-54825152 Msa0335740:intron 25.0%
! AGAATCAAGAATTGAACTTA+CGG + chr2_4:54825287-54825306 None:intergenic 25.0%
! TTGAAAAGTAAGTTGTTGAT+TGG + chr2_4:54825534-54825553 None:intergenic 25.0%
!! CTTTTGCTTATATTTCATTC+CGG + chr2_4:54826449-54826468 None:intergenic 25.0%
! ATATGATGTAAAGTTCCAAT+TGG + chr2_4:54826707-54826726 None:intergenic 25.0%
!! TTTATTGATAACACTCGATA+TGG - chr2_4:54826726-54826745 Msa0335740:CDS 25.0%
! CAGAAAACATAAAACCAAAA+AGG + chr2_4:54826920-54826939 None:intergenic 25.0%
!!! TTGGTTTTATGTTTTCTGTT+AGG - chr2_4:54826922-54826941 Msa0335740:intron 25.0%
! GTTTGTATATAATTGCCAAT+TGG + chr2_4:54826965-54826984 None:intergenic 25.0%
!!! ATTCCACTATAATTGTTTTG+AGG - chr2_4:54827092-54827111 Msa0335740:intron 25.0%
! TGAACCTTACTTCATAAAAT+TGG + chr2_4:54827463-54827482 None:intergenic 25.0%
!!! GCTTATTTTCATTTTATGCA+AGG - chr2_4:54827504-54827523 Msa0335740:intron 25.0%
!!! TCAGTATATATGAGTTTTGA+CGG + chr2_4:54828191-54828210 None:intergenic 25.0%
!! GACATAATTGATGATAAATC+CGG + chr2_4:54828240-54828259 None:intergenic 25.0%
! ATTTATCATCAATTATGTCG+AGG - chr2_4:54828241-54828260 Msa0335740:intron 25.0%
! AAAAAAGTCATCATAACCAT+CGG + chr2_4:54828351-54828370 None:intergenic 25.0%
!!! ATGGTTATGATGACTTTTTT+GGG - chr2_4:54828351-54828370 Msa0335740:intron 25.0%
! AATTAGTGAAATGAAAAAGG+AGG - chr2_4:54828481-54828500 Msa0335740:intron 25.0%
! AACTTTATAAAACTGCTCAA+TGG + chr2_4:54828878-54828897 None:intergenic 25.0%
!!! TTTTTTACAAGTTAGCTTAC+AGG - chr2_4:54828957-54828976 Msa0335740:intron 25.0%
!!! CAACTCTAAAGTTGAAATTA+GGG - chr2_4:54829412-54829431 Msa0335740:intron 25.0%
!! AGTGTATATATGTTTTGTGA+AGG - chr2_4:54829485-54829504 Msa0335740:intron 25.0%
! TTGTGTATAACTGTATATCT+CGG - chr2_4:54829527-54829546 Msa0335740:intron 25.0%
! CAATTCTACATATTGAAATG+AGG + chr2_4:54829613-54829632 None:intergenic 25.0%
!! ACTTCAAATTTAAGCTTTGA+AGG - chr2_4:54830097-54830116 Msa0335740:CDS 25.0%
! AAATAATGCATTATGCATAC+AGG + chr2_4:54830260-54830279 None:intergenic 25.0%
!!! CATTTTAAAGTTGTGCAAAA+AGG + chr2_4:54830299-54830318 None:intergenic 25.0%
AACATTGTTGAAGATAAGGT+TGG + chr2_4:54821771-54821790 None:intergenic 30.0%
GAGAAACATTGTTGAAGATA+AGG + chr2_4:54821775-54821794 None:intergenic 30.0%
! CTCCTTTTTATCTTCCTTAT+AGG - chr2_4:54822243-54822262 Msa0335740:CDS 30.0%
GATTGAAGAGTTTCTCAAAT+GGG - chr2_4:54822340-54822359 Msa0335740:intron 30.0%
!! GTTAGCTATGTTTTTGAAGA+TGG - chr2_4:54822362-54822381 Msa0335740:intron 30.0%
AACAACTAAGTTGTACTTAC+GGG + chr2_4:54822463-54822482 None:intergenic 30.0%
! TCTCTCTCTCATCTTATTTA+TGG + chr2_4:54822658-54822677 None:intergenic 30.0%
CAATATTTATCTATGTAGGG+CGG - chr2_4:54822765-54822784 Msa0335740:intron 30.0%
TGAGTAAAATTAACCAGAGT+CGG + chr2_4:54822868-54822887 None:intergenic 30.0%
! GAGACTAAATTGATAGTAAG+TGG - chr2_4:54822913-54822932 Msa0335740:intron 30.0%
!! AAAATAAGAGACTAGTTTGG+TGG - chr2_4:54823089-54823108 Msa0335740:intron 30.0%
ATAGTTATTGTTCGGCAATA+AGG - chr2_4:54823184-54823203 Msa0335740:CDS 30.0%
TTAGATATGAAGGAACTCTT+TGG - chr2_4:54823418-54823437 Msa0335740:CDS 30.0%
TAGATATGAAGGAACTCTTT+GGG - chr2_4:54823419-54823438 Msa0335740:CDS 30.0%
TGCTGTTAGTTATGCTTAAA+TGG - chr2_4:54823530-54823549 Msa0335740:CDS 30.0%
TTATGCTTAAATGGTTTAGG+TGG - chr2_4:54823539-54823558 Msa0335740:CDS 30.0%
AACAAGATAGAATGAGATAC+AGG - chr2_4:54823581-54823600 Msa0335740:CDS 30.0%
AACGATCAGATTACTATCAA+TGG + chr2_4:54823937-54823956 None:intergenic 30.0%
AACAAAACTTGTATTGCCTA+CGG + chr2_4:54824042-54824061 None:intergenic 30.0%
CAAATTTCCAAGTAATGTGT+TGG + chr2_4:54824185-54824204 None:intergenic 30.0%
ACTTGGAAATTTGATATAGG+CGG - chr2_4:54824192-54824211 Msa0335740:intron 30.0%
GTAACTAAGTTTGTCAAAGT+AGG + chr2_4:54824282-54824301 None:intergenic 30.0%
TTGAGTATATTTGTCTCAGT+TGG - chr2_4:54824412-54824431 Msa0335740:CDS 30.0%
TGAGTATATTTGTCTCAGTT+GGG - chr2_4:54824413-54824432 Msa0335740:CDS 30.0%
!!! CTAATATACATGTTTTGGTG+GGG - chr2_4:54824556-54824575 Msa0335740:CDS 30.0%
!!! TAATATACATGTTTTGGTGG+GGG - chr2_4:54824557-54824576 Msa0335740:CDS 30.0%
!!! CAAGTTCTGTCACTTTTTTT+TGG + chr2_4:54824687-54824706 None:intergenic 30.0%
! TCTATTTGTCATGTTTTCTG+CGG - chr2_4:54824730-54824749 Msa0335740:intron 30.0%
CCATTATCAAACAAAGTCAA+AGG + chr2_4:54824776-54824795 None:intergenic 30.0%
! CCTTTGACTTTGTTTGATAA+TGG - chr2_4:54824773-54824792 Msa0335740:intron 30.0%
AGACTTCAGATATACATACT+TGG + chr2_4:54825016-54825035 None:intergenic 30.0%
CTGAAGGGAAGATAATAAAA+AGG - chr2_4:54825132-54825151 Msa0335740:intron 30.0%
GATAGTTATCTTCTTGCAAA+TGG - chr2_4:54825203-54825222 Msa0335740:intron 30.0%
AATGACCGTATCATATATGT+AGG - chr2_4:54825470-54825489 Msa0335740:intron 30.0%
ATGGACCTACATATATGATA+CGG + chr2_4:54825478-54825497 None:intergenic 30.0%
CATAAACTTTATCTACTCCA+TGG + chr2_4:54825497-54825516 None:intergenic 30.0%
ATTTATAAAAAAAGGGGGAG+AGG - chr2_4:54825554-54825573 Msa0335740:intron 30.0%
GGTCAATCAATTATAATCGT+CGG - chr2_4:54825648-54825667 Msa0335740:intron 30.0%
AAGGTTCAATCACATAAATC+AGG + chr2_4:54825924-54825943 None:intergenic 30.0%
AACCTTGCAACTAAATTCAA+AGG - chr2_4:54825938-54825957 Msa0335740:intron 30.0%
AACCTTTGAATTTAGTTGCA+AGG + chr2_4:54825943-54825962 None:intergenic 30.0%
TGCAACTAAATTCAAAGGTT+AGG - chr2_4:54825943-54825962 Msa0335740:intron 30.0%
ATCTTACTTGACTCACATAT+AGG - chr2_4:54826006-54826025 Msa0335740:intron 30.0%
AAAATAAAATCTACCCTGCA+TGG + chr2_4:54826069-54826088 None:intergenic 30.0%
!! ATGCAGGGTAGATTTTATTT+TGG - chr2_4:54826068-54826087 Msa0335740:intron 30.0%
! AGAAATATTGGATGATGATG+AGG - chr2_4:54826091-54826110 Msa0335740:intron 30.0%
! GAAATATTGGATGATGATGA+GGG - chr2_4:54826092-54826111 Msa0335740:intron 30.0%
TATTTAATACCGCTGAAGTT+TGG + chr2_4:54826127-54826146 None:intergenic 30.0%
TATTAGTAATTTGAGAGGTG+TGG - chr2_4:54826175-54826194 Msa0335740:intron 30.0%
AAAACAAAACCATGAATACG+AGG + chr2_4:54826347-54826366 None:intergenic 30.0%
!!! CGTATTCATGGTTTTGTTTT+TGG - chr2_4:54826347-54826366 Msa0335740:intron 30.0%
AGTTGAAAAGTCAATGTATG+TGG - chr2_4:54826473-54826492 Msa0335740:intron 30.0%
GATATGTTTAAATGGCAAGA+AGG + chr2_4:54826610-54826629 None:intergenic 30.0%
GTCATGATATAAAGACCAAT+TGG - chr2_4:54826689-54826708 Msa0335740:intron 30.0%
! TAGTCCTTTTCATTACTCTT+GGG - chr2_4:54826851-54826870 Msa0335740:CDS 30.0%
AAAACCCAAGAGTAATGAAA+AGG + chr2_4:54826858-54826877 None:intergenic 30.0%
AAGAAGAAACCCGAAAATAA+AGG + chr2_4:54826987-54827006 None:intergenic 30.0%
TTGTTGAGATGATTGTCAAA+GGG + chr2_4:54827193-54827212 None:intergenic 30.0%
ATTGTTGAGATGATTGTCAA+AGG + chr2_4:54827194-54827213 None:intergenic 30.0%
ATCATCTCAACAATTGATGA+TGG - chr2_4:54827200-54827219 Msa0335740:intron 30.0%
TAAAATTGGTTAATGAAGCC+AGG + chr2_4:54827449-54827468 None:intergenic 30.0%
ACAGAAAAAGAGAAAGACTA+AGG + chr2_4:54828029-54828048 None:intergenic 30.0%
TGTATGAACAAGTACACAAT+TGG - chr2_4:54828046-54828065 Msa0335740:intron 30.0%
!! CAGTATATATGAGTTTTGAC+GGG + chr2_4:54828190-54828209 None:intergenic 30.0%
GTCAAAACTCATATATACTG+AGG - chr2_4:54828190-54828209 Msa0335740:intron 30.0%
! TAATTGATGATAAATCCGGT+TGG + chr2_4:54828236-54828255 None:intergenic 30.0%
AATATGGAATACGTATGTTC+TGG - chr2_4:54828270-54828289 Msa0335740:intron 30.0%
! GTAGGAATATAGCCTTTTTA+GGG + chr2_4:54828328-54828347 None:intergenic 30.0%
AAAAAGTCATCATAACCATC+GGG + chr2_4:54828350-54828369 None:intergenic 30.0%
!!! GATGGTTATGATGACTTTTT+TGG - chr2_4:54828350-54828369 Msa0335740:intron 30.0%
ATAAGAACAAAAAGACCGTA+TGG - chr2_4:54828378-54828397 Msa0335740:intron 30.0%
TAAGAACAAAAAGACCGTAT+GGG - chr2_4:54828379-54828398 Msa0335740:intron 30.0%
! GTTTGATAACCTAGGAAAAT+GGG - chr2_4:54828442-54828461 Msa0335740:intron 30.0%
GATAGAAGCTGAATTATGTT+TGG - chr2_4:54828526-54828545 Msa0335740:CDS 30.0%
!! CAGATTTTAAGAATCACATG+AGG - chr2_4:54829034-54829053 Msa0335740:intron 30.0%
GGTCAATTACATTCAATGAA+TGG + chr2_4:54829205-54829224 None:intergenic 30.0%
!! CCTAATTTCAACTTTAGAGT+TGG + chr2_4:54829414-54829433 None:intergenic 30.0%
!! CCAACTCTAAAGTTGAAATT+AGG - chr2_4:54829411-54829430 Msa0335740:intron 30.0%
TATTGAAATGAGGTGCAATT+AGG + chr2_4:54829603-54829622 None:intergenic 30.0%
AGAATTGAAACTGTTTGAGT+TGG - chr2_4:54829626-54829645 Msa0335740:CDS 30.0%
!!! CTTTTTGAAGTCGTATAACA+CGG + chr2_4:54829943-54829962 None:intergenic 30.0%
! CAAAGCTTAAATTTGAAGTG+AGG + chr2_4:54830096-54830115 None:intergenic 30.0%
!!! ACTCATTTTTTGGTACACAA+GGG + chr2_4:54830144-54830163 None:intergenic 30.0%
!! ATAAGGTTGGTTGTTGTTTG+CGG + chr2_4:54821758-54821777 None:intergenic 35.0%
!!! CGTCTTTGAAGTTTTGTTCT+GGG + chr2_4:54821974-54821993 None:intergenic 35.0%
!!! ACGTCTTTGAAGTTTTGTTC+TGG + chr2_4:54821975-54821994 None:intergenic 35.0%
TCATCAGGTGGAAAATCAAA+CGG + chr2_4:54822074-54822093 None:intergenic 35.0%
TCTTTCCAATTCTCATCATC+AGG + chr2_4:54822089-54822108 None:intergenic 35.0%
AAGAAGATTTGAGAGAGCTT+TGG - chr2_4:54822108-54822127 Msa0335740:CDS 35.0%
AGAAGATTTGAGAGAGCTTT+GGG - chr2_4:54822109-54822128 Msa0335740:CDS 35.0%
AATGGGAATAACACCATTAC+TGG - chr2_4:54822134-54822153 Msa0335740:CDS 35.0%
AATAACACCATTACTGGTAC+TGG - chr2_4:54822140-54822159 Msa0335740:CDS 35.0%
!! TGTGAAGTGGAAGCATTATA+AGG - chr2_4:54822202-54822221 Msa0335740:CDS 35.0%
!! GTGAAGTGGAAGCATTATAA+GGG - chr2_4:54822203-54822222 Msa0335740:CDS 35.0%
GGAAGATAAAAAGGAGCAAT+AGG + chr2_4:54822239-54822258 None:intergenic 35.0%
GGATTGAAGAGTTTCTCAAA+TGG - chr2_4:54822339-54822358 Msa0335740:intron 35.0%
! TAGCTGCATTGACGTTAATA+TGG - chr2_4:54822482-54822501 Msa0335740:intron 35.0%
! TGCATTGACGTTAATATGGA+TGG - chr2_4:54822486-54822505 Msa0335740:intron 35.0%
! GCATTGACGTTAATATGGAT+GGG - chr2_4:54822487-54822506 Msa0335740:intron 35.0%
GAGAATCACATGTTCAATCT+CGG + chr2_4:54822523-54822542 None:intergenic 35.0%
TCTCTACTTCTCCACATTTA+AGG - chr2_4:54822539-54822558 Msa0335740:intron 35.0%
!! GAGATTCACTGACTTTAAGA+CGG - chr2_4:54822579-54822598 Msa0335740:intron 35.0%
!! AGATTCACTGACTTTAAGAC+GGG - chr2_4:54822580-54822599 Msa0335740:intron 35.0%
TAGTGGCTATACTCACAAAT+TGG + chr2_4:54822727-54822746 None:intergenic 35.0%
GCTCAAATGATAAACATGCT+TGG - chr2_4:54822787-54822806 Msa0335740:intron 35.0%
!! ATAAACATGCTTGGCTTTGT+AGG - chr2_4:54822796-54822815 Msa0335740:intron 35.0%
!! TAAACATGCTTGGCTTTGTA+GGG - chr2_4:54822797-54822816 Msa0335740:intron 35.0%
!! TTTGTAGGGTGCTCTAAAAT+AGG - chr2_4:54822811-54822830 Msa0335740:intron 35.0%
GAGTAAAATTAACCAGAGTC+GGG + chr2_4:54822867-54822886 None:intergenic 35.0%
TTGACAGCTTGATAGAGATA+AGG - chr2_4:54823016-54823035 Msa0335740:intron 35.0%
!! TGTTCAGTGTTGGTAAATAG+AGG - chr2_4:54823136-54823155 Msa0335740:intron 35.0%
AAATAGAGGCTATTGCAAGA+TGG - chr2_4:54823150-54823169 Msa0335740:intron 35.0%
AGTACAATATTGTCGAATGG+TGG - chr2_4:54823212-54823231 Msa0335740:CDS 35.0%
! AACAAATGCCTATTTTGTGC+CGG - chr2_4:54823336-54823355 Msa0335740:CDS 35.0%
GATGATATTGCTCAAGGAAA+AGG - chr2_4:54823441-54823460 Msa0335740:CDS 35.0%
TTAAATGGTTTAGGTGGTAG+TGG - chr2_4:54823545-54823564 Msa0335740:CDS 35.0%
AGACAATTACGGTACTGTTT+GGG + chr2_4:54823799-54823818 None:intergenic 35.0%
!!! CTTTTAGGATGTTACGACAA+TGG - chr2_4:54823842-54823861 Msa0335740:CDS 35.0%
AATCGTGAATGTATTTCCGT+AGG - chr2_4:54823872-54823891 Msa0335740:intron 35.0%
ATCGTGAATGTATTTCCGTA+GGG - chr2_4:54823873-54823892 Msa0335740:intron 35.0%
TAGTTAAACACAGGACTGAT+AGG - chr2_4:54824061-54824080 Msa0335740:intron 35.0%
AGTTAAACACAGGACTGATA+GGG - chr2_4:54824062-54824081 Msa0335740:intron 35.0%
GACATAGCATATGTACTATC+AGG + chr2_4:54824115-54824134 None:intergenic 35.0%
GACAAACTTAGTTACAGAGA+AGG - chr2_4:54824287-54824306 Msa0335740:intron 35.0%
AAACTTAGTTACAGAGAAGG+AGG - chr2_4:54824290-54824309 Msa0335740:intron 35.0%
!!! AATATACATGTTTTGGTGGG+GGG - chr2_4:54824558-54824577 Msa0335740:CDS 35.0%
GGATAACACTTCGTATTCAA+TGG + chr2_4:54824649-54824668 None:intergenic 35.0%
! ATACGAAGTGTTATCCAAGT+TGG - chr2_4:54824653-54824672 Msa0335740:intron 35.0%
GAAGCTAATACATCTAATGC+AGG + chr2_4:54824829-54824848 None:intergenic 35.0%
ATCATAGGTATGAAGGTGAA+TGG - chr2_4:54824920-54824939 Msa0335740:intron 35.0%
ATTCATCCCTCTCATAATAG+GGG + chr2_4:54825241-54825260 None:intergenic 35.0%
CATTCATCCCTCTCATAATA+GGG + chr2_4:54825242-54825261 None:intergenic 35.0%
CTATTATGAGAGGGATGAAT+GGG - chr2_4:54825241-54825260 Msa0335740:intron 35.0%
! ATGCTGCATTGTCTCTATTT+TGG - chr2_4:54825320-54825339 Msa0335740:intron 35.0%
! AAAACTGTATTTTCGTGACC+AGG - chr2_4:54825375-54825394 Msa0335740:intron 35.0%
! AAACTGTATTTTCGTGACCA+GGG - chr2_4:54825376-54825395 Msa0335740:intron 35.0%
GTATCATATATGTAGGTCCA+TGG - chr2_4:54825477-54825496 Msa0335740:intron 35.0%
GTTCAATCACATAAATCAGG+TGG + chr2_4:54825921-54825940 None:intergenic 35.0%
ATGCTAGTCATCTCAACATA+AGG - chr2_4:54825968-54825987 Msa0335740:intron 35.0%
TGCTAGTCATCTCAACATAA+GGG - chr2_4:54825969-54825988 Msa0335740:intron 35.0%
CTAAACATCATACTTCCATC+TGG + chr2_4:54826299-54826318 None:intergenic 35.0%
AATTGAAAGCCTCGTATTCA+TGG - chr2_4:54826335-54826354 Msa0335740:intron 35.0%
GTAACATGTGTGCTAATGAA+TGG + chr2_4:54826404-54826423 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+GGG + chr2_4:54826540-54826559 None:intergenic 35.0%
TTGCTTATATTTCATTCCGG+AGG + chr2_4:54826539-54826558 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+TGG - chr2_4:54826540-54826559 Msa0335740:intron 35.0%
GGGTGTTCTTAAATCTTACT+TGG + chr2_4:54826637-54826656 None:intergenic 35.0%
CACAAATTGGAAAAGAACAC+TGG + chr2_4:54826664-54826683 None:intergenic 35.0%
! CAGTGTTCTTTTCCAATTTG+TGG - chr2_4:54826662-54826681 Msa0335740:intron 35.0%
ATCATGACTTAGCCACAAAT+TGG + chr2_4:54826677-54826696 None:intergenic 35.0%
AACATGCAGAACAAAGCAAT+TGG + chr2_4:54826817-54826836 None:intergenic 35.0%
! CTAGTCCTTTTCATTACTCT+TGG - chr2_4:54826850-54826869 Msa0335740:CDS 35.0%
CGACCTCAAAACAATTATAG+TGG + chr2_4:54827098-54827117 None:intergenic 35.0%
ATGATTGTCAAAGGGTAAAG+AGG + chr2_4:54827185-54827204 None:intergenic 35.0%
! AAGATATTTTGTCTGTGCAG+TGG - chr2_4:54827349-54827368 Msa0335740:intron 35.0%
CATGCATATGATTCTGTTAC+AGG - chr2_4:54827535-54827554 Msa0335740:intron 35.0%
TAGATCAGGAAAGAGAAATG+TGG - chr2_4:54827591-54827610 Msa0335740:intron 35.0%
!! AAATGGGCTCTAAATACCTT+TGG + chr2_4:54827681-54827700 None:intergenic 35.0%
! AGACTAAGGTCTGTTTGTTA+CGG + chr2_4:54828015-54828034 None:intergenic 35.0%
TTGTTAAGCAGGACAAATTC+AGG + chr2_4:54828143-54828162 None:intergenic 35.0%
TGAATTTGTCCTGCTTAACA+AGG - chr2_4:54828142-54828161 Msa0335740:intron 35.0%
TATGTCGAGGATGAGAAATA+TGG - chr2_4:54828254-54828273 Msa0335740:intron 35.0%
! ACTTTCTCACCTTTTTGCAA+AGG + chr2_4:54828302-54828321 None:intergenic 35.0%
TGAGAAAGTTGACCCTAAAA+AGG - chr2_4:54828313-54828332 Msa0335740:intron 35.0%
! GGTAGGAATATAGCCTTTTT+AGG + chr2_4:54828329-54828348 None:intergenic 35.0%
TTTCCTAGGTTATCAAACCA+TGG + chr2_4:54828440-54828459 None:intergenic 35.0%
! GGTTTGATAACCTAGGAAAA+TGG - chr2_4:54828441-54828460 Msa0335740:intron 35.0%
AGCTGAATTATGTTTGGAAG+AGG - chr2_4:54828532-54828551 Msa0335740:CDS 35.0%
AGAGAAAGAGGAGAAAAAGA+AGG - chr2_4:54828589-54828608 Msa0335740:intron 35.0%
! ATCTTGTTTGACTACAGAAC+CGG + chr2_4:54828645-54828664 None:intergenic 35.0%
TTCATCTTCTTCATCTACAC+GGG + chr2_4:54828675-54828694 None:intergenic 35.0%
CTTCATCTTCTTCATCTACA+CGG + chr2_4:54828676-54828695 None:intergenic 35.0%
TGAAGAAGATGAAGATGATG+AGG - chr2_4:54828682-54828701 Msa0335740:intron 35.0%
! ATATTGCACCATCGAGTTTT+GGG - chr2_4:54828717-54828736 Msa0335740:intron 35.0%
! TGTAGAAAATGGTGATTTGC+CGG + chr2_4:54828786-54828805 None:intergenic 35.0%
GCTAGTGAAGTTGTAGAAAA+TGG + chr2_4:54828797-54828816 None:intergenic 35.0%
GTTAACGAACAACAAAGACA+TGG - chr2_4:54829125-54829144 Msa0335740:intron 35.0%
TTAACCACTGATCGAATTTG+TGG + chr2_4:54829226-54829245 None:intergenic 35.0%
CAAGAATTGATGCCAATAGT+TGG + chr2_4:54829347-54829366 None:intergenic 35.0%
! ATGACATATGTTTTGCTCCT+TGG + chr2_4:54829571-54829590 None:intergenic 35.0%
GAGCAAAACATATGTCATGT+TGG - chr2_4:54829573-54829592 Msa0335740:intron 35.0%
! AATGATTGTTGCAGCTTTGA+TGG + chr2_4:54829703-54829722 None:intergenic 35.0%
TGCAACAATCATTTCCATTC+TGG - chr2_4:54829710-54829729 Msa0335740:CDS 35.0%
!! ATCATTTCCATTCTGGAACA+AGG - chr2_4:54829717-54829736 Msa0335740:CDS 35.0%
! TTTTTCATGTGCTTTACCGA+CGG + chr2_4:54829857-54829876 None:intergenic 35.0%
GTTGAGTCAAGAAGTTATTC+AGG - chr2_4:54829877-54829896 Msa0335740:CDS 35.0%
AGTCAAGAAGTTATTCAGGT+GGG - chr2_4:54829881-54829900 Msa0335740:CDS 35.0%
! ATTTGAAGTGAGGTTCTCTT+TGG + chr2_4:54830086-54830105 None:intergenic 35.0%
!!! GGCCATTTTTATTCTTAGCT+AGG - chr2_4:54830118-54830137 Msa0335740:CDS 35.0%
GGCCTAGCTAAGAATAAAAA+TGG + chr2_4:54830123-54830142 None:intergenic 35.0%
!!! CACTCATTTTTTGGTACACA+AGG + chr2_4:54830145-54830164 None:intergenic 35.0%
ACCAAAAAATGAGTGAGCAT+AGG - chr2_4:54830150-54830169 Msa0335740:CDS 35.0%
!!! ACCTATGCTCACTCATTTTT+TGG + chr2_4:54830154-54830173 None:intergenic 35.0%
TCATATGTGTCACACTTTGT+TGG + chr2_4:54830322-54830341 None:intergenic 35.0%
AGTGTGACACATATGACAAA+TGG - chr2_4:54830326-54830345 Msa0335740:five_prime_UTR 35.0%
!! TAAGGTTGGTTGTTGTTTGC+GGG + chr2_4:54821757-54821776 None:intergenic 40.0%
TGAGATAAGATTCGACATCG+AGG + chr2_4:54821899-54821918 None:intergenic 40.0%
!! GTTTTGTTCTGGGTCGAATT+CGG + chr2_4:54821964-54821983 None:intergenic 40.0%
CATCAGGTGGAAAATCAAAC+GGG + chr2_4:54822073-54822092 None:intergenic 40.0%
! TTCCACCTGATGATGAGAAT+TGG - chr2_4:54822081-54822100 Msa0335740:CDS 40.0%
TTCCAATTCTCATCATCAGG+TGG + chr2_4:54822086-54822105 None:intergenic 40.0%
!! TTGAGAGAGCTTTGGGATAA+TGG - chr2_4:54822116-54822135 Msa0335740:CDS 40.0%
!! TGAGAGAGCTTTGGGATAAT+GGG - chr2_4:54822117-54822136 Msa0335740:CDS 40.0%
TTCACATATTCCCATTCCTC+AGG + chr2_4:54822188-54822207 None:intergenic 40.0%
AGGAATGGGAATATGTGAAG+TGG - chr2_4:54822189-54822208 Msa0335740:CDS 40.0%
GGAGGAATAGGTTTCCTATA+AGG + chr2_4:54822260-54822279 None:intergenic 40.0%
TTAGTAGGTACAGGAGGAAT+AGG + chr2_4:54822272-54822291 None:intergenic 40.0%
GAATGATTAGTAGGTACAGG+AGG + chr2_4:54822278-54822297 None:intergenic 40.0%
GCAGAATGATTAGTAGGTAC+AGG + chr2_4:54822281-54822300 None:intergenic 40.0%
AGACTCACACACCTTAAATG+TGG + chr2_4:54822553-54822572 None:intergenic 40.0%
! CATTTAAGGTGTGTGAGTCT+AGG - chr2_4:54822553-54822572 Msa0335740:intron 40.0%
GTTCTGGTCAAATAGTCTAG+TGG + chr2_4:54822744-54822763 None:intergenic 40.0%
!! GTCTCTGTTTTGTTCAGTGT+TGG - chr2_4:54823126-54823145 Msa0335740:intron 40.0%
CTTCTTATCAAGTGTCCTTC+GGG + chr2_4:54823291-54823310 None:intergenic 40.0%
GCTTCTTATCAAGTGTCCTT+CGG + chr2_4:54823292-54823311 None:intergenic 40.0%
!! CTTTGGGATGATATTGCTCA+AGG - chr2_4:54823435-54823454 Msa0335740:CDS 40.0%
GGTGTTTATACTTCTCCAGA+TGG - chr2_4:54823462-54823481 Msa0335740:CDS 40.0%
!!! ACATTGTTTTGGCATGCAGT+TGG - chr2_4:54823507-54823526 Msa0335740:CDS 40.0%
CTAAGCTGTTTACCCAAACA+GGG + chr2_4:54823607-54823626 None:intergenic 40.0%
ACTAAGCTGTTTACCCAAAC+AGG + chr2_4:54823608-54823627 None:intergenic 40.0%
CAGACAATTACGGTACTGTT+TGG + chr2_4:54823800-54823819 None:intergenic 40.0%
CCAACACACACAGACAATTA+CGG + chr2_4:54823810-54823829 None:intergenic 40.0%
CGTAATTGTCTGTGTGTGTT+GGG - chr2_4:54823808-54823827 Msa0335740:CDS 40.0%
GTAATTGTCTGTGTGTGTTG+GGG - chr2_4:54823809-54823828 Msa0335740:CDS 40.0%
TCGTGAATGTATTTCCGTAG+GGG - chr2_4:54823874-54823893 Msa0335740:intron 40.0%
ATACAAGCCATCACTGATGT+TGG - chr2_4:54823980-54823999 Msa0335740:intron 40.0%
CAAATCACCAACATCAGTGA+TGG + chr2_4:54823990-54824009 None:intergenic 40.0%
GTTAAACACAGGACTGATAG+GGG - chr2_4:54824063-54824082 Msa0335740:intron 40.0%
TCCACATGCAAAAGCCAATT+GGG - chr2_4:54824135-54824154 Msa0335740:intron 40.0%
TTGATATAGGCGGCAAACAA+AGG - chr2_4:54824202-54824221 Msa0335740:intron 40.0%
! CAAACAAAGGACCAAGCTTT+TGG - chr2_4:54824215-54824234 Msa0335740:intron 40.0%
CTGCAAGGACAATAATATGC+CGG - chr2_4:54824438-54824457 Msa0335740:intron 40.0%
TGCAAGGACAATAATATGCC+GGG - chr2_4:54824439-54824458 Msa0335740:intron 40.0%
TCCAACAGGGACATATTGAA+GGG + chr2_4:54824609-54824628 None:intergenic 40.0%
TTACGAAAACCTCTCCAACA+GGG + chr2_4:54824622-54824641 None:intergenic 40.0%
ATTACGAAAACCTCTCCAAC+AGG + chr2_4:54824623-54824642 None:intergenic 40.0%
!! TTTTGGGTAGTTAGCCAACT+TGG + chr2_4:54824670-54824689 None:intergenic 40.0%
!! GAAAGTGTTACACAATGCAG+TGG + chr2_4:54824868-54824887 None:intergenic 40.0%
AGATATACATACTTGGACCC+GGG + chr2_4:54825009-54825028 None:intergenic 40.0%
CAGATATACATACTTGGACC+CGG + chr2_4:54825010-54825029 None:intergenic 40.0%
AGAGAGAGAATGGCTTGATA+AGG - chr2_4:54825172-54825191 Msa0335740:intron 40.0%
TTGAAGTCCCCTATTATGAG+AGG - chr2_4:54825231-54825250 Msa0335740:intron 40.0%
TGAAGTCCCCTATTATGAGA+GGG - chr2_4:54825232-54825251 Msa0335740:intron 40.0%
CCATTCATCCCTCTCATAAT+AGG + chr2_4:54825243-54825262 None:intergenic 40.0%
CCTATTATGAGAGGGATGAA+TGG - chr2_4:54825240-54825259 Msa0335740:intron 40.0%
!! GATGAATGGGTTAAGGAGTT+TGG - chr2_4:54825254-54825273 Msa0335740:intron 40.0%
TCTCTCTGATACGTTGTAAC+TGG - chr2_4:54825345-54825364 Msa0335740:intron 40.0%
!! CACGATTTGCTTTAGCTTTC+TGG - chr2_4:54825812-54825831 Msa0335740:intron 40.0%
TTACATTATCTGTGCCATGC+AGG - chr2_4:54826052-54826071 Msa0335740:intron 40.0%
TACATTATCTGTGCCATGCA+GGG - chr2_4:54826053-54826072 Msa0335740:intron 40.0%
ATGTGATGACCAAACTTCAG+CGG - chr2_4:54826115-54826134 Msa0335740:intron 40.0%
ATGTTTGTGAACAAGCCAGA+TGG - chr2_4:54826281-54826300 Msa0335740:intron 40.0%
TGGATCTATCAAACAGACAG+AGG + chr2_4:54826384-54826403 None:intergenic 40.0%
GTATTAAGATGTACTCCCTC+CGG - chr2_4:54826427-54826446 Msa0335740:intron 40.0%
ACATGAATCTGTACTCCATC+CGG + chr2_4:54826558-54826577 None:intergenic 40.0%
AAATGGCAAGAAGGAGATGT+CGG + chr2_4:54826601-54826620 None:intergenic 40.0%
TGGAAAAGAACACTGGTGAT+GGG + chr2_4:54826657-54826676 None:intergenic 40.0%
TTGGAAAAGAACACTGGTGA+TGG + chr2_4:54826658-54826677 None:intergenic 40.0%
! TTGATAACACTCGATATGGC+TGG - chr2_4:54826730-54826749 Msa0335740:CDS 40.0%
AAAACCTGTTAGCCCTTGAT+CGG - chr2_4:54826770-54826789 Msa0335740:CDS 40.0%
! TTACTCTTGGGTTTTGCCTT+TGG - chr2_4:54826863-54826882 Msa0335740:CDS 40.0%
CCAATCAGGAAAAGGAAACA+TGG + chr2_4:54827289-54827308 None:intergenic 40.0%
! CCATGTTTCCTTTTCCTGAT+TGG - chr2_4:54827286-54827305 Msa0335740:intron 40.0%
! AAAACAGTATGGTGCCAATC+AGG + chr2_4:54827303-54827322 None:intergenic 40.0%
GCATGCTGTGGATCATTATA+CGG + chr2_4:54827392-54827411 None:intergenic 40.0%
TCATACAAGTAAGCATGCTG+TGG + chr2_4:54827404-54827423 None:intergenic 40.0%
CAGCATGCTTACTTGTATGA+AGG - chr2_4:54827404-54827423 Msa0335740:intron 40.0%
TGCTTACTTGTATGAAGGAG+AGG - chr2_4:54827409-54827428 Msa0335740:intron 40.0%
TGTTACAGGTTCCTGATTAC+TGG - chr2_4:54827549-54827568 Msa0335740:intron 40.0%
! GCGTATGTTTTCCAGTAATC+AGG + chr2_4:54827563-54827582 None:intergenic 40.0%
CTTTCTATAGATCTCCCCTT+AGG - chr2_4:54827621-54827640 Msa0335740:intron 40.0%
TGTTATTCTCCTCTGGTCAA+GGG + chr2_4:54828115-54828134 None:intergenic 40.0%
! TTGTTATTCTCCTCTGGTCA+AGG + chr2_4:54828116-54828135 None:intergenic 40.0%
TTAAGCAGGACAAATTCAGG+AGG + chr2_4:54828140-54828159 None:intergenic 40.0%
! TTCTCACCTTTTTGCAAAGG+TGG + chr2_4:54828299-54828318 None:intergenic 40.0%
!! TTGAAAAAGTGTCCAAGCCA+TGG - chr2_4:54828420-54828439 Msa0335740:intron 40.0%
TAGGTTATCAAACCATGGCT+TGG + chr2_4:54828435-54828454 None:intergenic 40.0%
! AAGCCATGGTTTGATAACCT+AGG - chr2_4:54828434-54828453 Msa0335740:intron 40.0%
TTATGTTTGGAAGAGGCCAT+TGG - chr2_4:54828539-54828558 Msa0335740:CDS 40.0%
TATGTTTGGAAGAGGCCATT+GGG - chr2_4:54828540-54828559 Msa0335740:CDS 40.0%
ATTGCGTAGAAGAGAGAAAG+AGG - chr2_4:54828577-54828596 Msa0335740:intron 40.0%
GAAAGAGGAGAAAAAGAAGG+CGG - chr2_4:54828592-54828611 Msa0335740:intron 40.0%
TTGCCAGATGAAGATGATAC+CGG - chr2_4:54828623-54828642 Msa0335740:intron 40.0%
! GATATTGCACCATCGAGTTT+TGG - chr2_4:54828716-54828735 Msa0335740:intron 40.0%
TCAATAGACCCAAAACTCGA+TGG + chr2_4:54828728-54828747 None:intergenic 40.0%
ATCAAAGACAGATCAGCAGA+AGG - chr2_4:54828754-54828773 Msa0335740:intron 40.0%
TCAAAGACAGATCAGCAGAA+GGG - chr2_4:54828755-54828774 Msa0335740:intron 40.0%
! GTAGAAAATGGTGATTTGCC+GGG + chr2_4:54828785-54828804 None:intergenic 40.0%
GTCAACACACATACACACAA+GGG + chr2_4:54829001-54829020 None:intergenic 40.0%
AGTCAACACACATACACACA+AGG + chr2_4:54829002-54829021 None:intergenic 40.0%
ATGTTCAGCAGATGGTTAAC+AGG - chr2_4:54829154-54829173 Msa0335740:intron 40.0%
TTGACCACAAATTCGATCAG+TGG - chr2_4:54829219-54829238 Msa0335740:intron 40.0%
CTCAAGTGGTAACCAACTAT+TGG - chr2_4:54829332-54829351 Msa0335740:intron 40.0%
!!! TCGTTGTCATTTGGCTTTTC+AGG - chr2_4:54829675-54829694 Msa0335740:CDS 40.0%
!! TTTCCATTCTGGAACAAGGT+TGG - chr2_4:54829721-54829740 Msa0335740:CDS 40.0%
AACAAGGTTGGATCAAAACC+AGG - chr2_4:54829733-54829752 Msa0335740:CDS 40.0%
ACAAGGTTGGATCAAAACCA+GGG - chr2_4:54829734-54829753 Msa0335740:CDS 40.0%
GAGTCAAGAAGTTATTCAGG+TGG - chr2_4:54829880-54829899 Msa0335740:CDS 40.0%
TCAAAAGAGCGAAGAATGAG+TGG - chr2_4:54829967-54829986 Msa0335740:CDS 40.0%
ATGTTGTCTAAATCCCTCTC+TGG + chr2_4:54830015-54830034 None:intergenic 40.0%
TGAGGTTCTCTTTGGATGTT+TGG + chr2_4:54830078-54830097 None:intergenic 40.0%
TTGGGTTTCTGATTCTGCGT+CGG + chr2_4:54821871-54821890 None:intergenic 45.0%
CGACAAAAAAACTCGTCGCA+AGG - chr2_4:54822034-54822053 Msa0335740:CDS 45.0%
!! ACACCATTACTGGTACTGGT+TGG - chr2_4:54822144-54822163 Msa0335740:CDS 45.0%
!! CACCATTACTGGTACTGGTT+GGG - chr2_4:54822145-54822164 Msa0335740:CDS 45.0%
! TTTTGCTACGCCTGAGGAAT+GGG - chr2_4:54822175-54822194 Msa0335740:CDS 45.0%
!! CTTTCCCGCTTTAAAGTCAC+TGG - chr2_4:54822698-54822717 Msa0335740:intron 45.0%
!! GCATCCAGTGACTTTAAAGC+GGG + chr2_4:54822705-54822724 None:intergenic 45.0%
! GGCATCCAGTGACTTTAAAG+CGG + chr2_4:54822706-54822725 None:intergenic 45.0%
AAATGCTAACAAGTGCCCGA+AGG - chr2_4:54823273-54823292 Msa0335740:CDS 45.0%
ACAAACCTGACAAGTCCATC+TGG + chr2_4:54823480-54823499 None:intergenic 45.0%
AATGAGATACAGGCCCTGTT+TGG - chr2_4:54823591-54823610 Msa0335740:CDS 45.0%
ATGAGATACAGGCCCTGTTT+GGG - chr2_4:54823592-54823611 Msa0335740:CDS 45.0%
CCGTAATTGTCTGTGTGTGT+TGG - chr2_4:54823807-54823826 Msa0335740:CDS 45.0%
!! ACTGATGTTGGTGATTTGCC+TGG - chr2_4:54823992-54824011 Msa0335740:intron 45.0%
CTCCACATGCAAAAGCCAAT+TGG - chr2_4:54824134-54824153 Msa0335740:intron 45.0%
! CCAAGTAATGTGTTGGTCAG+CGG + chr2_4:54824178-54824197 None:intergenic 45.0%
CTCGTCAAAGACCAAAAGCT+TGG + chr2_4:54824229-54824248 None:intergenic 45.0%
!! CAAGCTTTTGGTCTTTGACG+AGG - chr2_4:54824227-54824246 Msa0335740:intron 45.0%
GCAAGGACAATAATATGCCG+GGG - chr2_4:54824440-54824459 Msa0335740:intron 45.0%
! TTTTGGTCGCGTAGCTTAGT+CGG + chr2_4:54824488-54824507 None:intergenic 45.0%
ACATATTGAAGGGGGAAGCA+GGG + chr2_4:54824599-54824618 None:intergenic 45.0%
CAACAGGGACATATTGAAGG+GGG + chr2_4:54824607-54824626 None:intergenic 45.0%
CCAACAGGGACATATTGAAG+GGG + chr2_4:54824608-54824627 None:intergenic 45.0%
CTCCAACAGGGACATATTGA+AGG + chr2_4:54824610-54824629 None:intergenic 45.0%
TCAATATGTCCCTGTTGGAG+AGG - chr2_4:54824610-54824629 Msa0335740:CDS 45.0%
! TCATGTTTTCTGCGGCTTCA+TGG - chr2_4:54824738-54824757 Msa0335740:intron 45.0%
CAATAACACCATGACCCTCT+GGG + chr2_4:54824957-54824976 None:intergenic 45.0%
TCAATAACACCATGACCCTC+TGG + chr2_4:54824958-54824977 None:intergenic 45.0%
CCTGTTATAGAACCTGTTCC+CGG - chr2_4:54824988-54825007 Msa0335740:intron 45.0%
CTGTTATAGAACCTGTTCCC+GGG - chr2_4:54824989-54825008 Msa0335740:intron 45.0%
AAGAAGCAATGCGAGCTGAA+GGG - chr2_4:54825117-54825136 Msa0335740:intron 45.0%
AAGCCATTCTCTCTCTTCTG+GGG + chr2_4:54825168-54825187 None:intergenic 45.0%
CAAGCCATTCTCTCTCTTCT+GGG + chr2_4:54825169-54825188 None:intergenic 45.0%
TCAAGCCATTCTCTCTCTTC+TGG + chr2_4:54825170-54825189 None:intergenic 45.0%
!! TGAGAGGGATGAATGGGTTA+AGG - chr2_4:54825247-54825266 Msa0335740:intron 45.0%
! ATTTTCGTGACCAGGGAGAA+AGG - chr2_4:54825383-54825402 Msa0335740:intron 45.0%
AAAGGTCGCTATCGTTATGC+TGG - chr2_4:54825401-54825420 Msa0335740:intron 45.0%
TATGCTGGTCAGATGAAGCA+TGG - chr2_4:54825416-54825435 Msa0335740:intron 45.0%
ATGCTGGTCAGATGAAGCAT+GGG - chr2_4:54825417-54825436 Msa0335740:intron 45.0%
! ATATCTGCTGCACCGATCAA+GGG + chr2_4:54826785-54826804 None:intergenic 45.0%
! TATATCTGCTGCACCGATCA+AGG + chr2_4:54826786-54826805 None:intergenic 45.0%
GGTGCAGCAGATATATGTTG+TGG - chr2_4:54826791-54826810 Msa0335740:CDS 45.0%
ACATAGCAGAGGTAGACCAA+AGG + chr2_4:54826882-54826901 None:intergenic 45.0%
ACAACACTGCTACATAGCAG+AGG + chr2_4:54826893-54826912 None:intergenic 45.0%
!! GCAGTGTTGTTCACCCTTTT+TGG - chr2_4:54826903-54826922 Msa0335740:intron 45.0%
TTCCATGCAGTTATCCTGGA+TGG - chr2_4:54827121-54827140 Msa0335740:intron 45.0%
! GTATGGTGCCAATCAGGAAA+AGG + chr2_4:54827297-54827316 None:intergenic 45.0%
GCAGTGGTTAGAGAAAAGAG+AGG - chr2_4:54827365-54827384 Msa0335740:intron 45.0%
TGTATGAAGGAGAGGATGTG+TGG - chr2_4:54827417-54827436 Msa0335740:intron 45.0%
ATACGCGCATGAAGTAGATC+AGG - chr2_4:54827577-54827596 Msa0335740:intron 45.0%
AGCTGGCATAGGTATCCTAA+GGG + chr2_4:54827639-54827658 None:intergenic 45.0%
TATTCCAACTCAGCTGGCAT+AGG + chr2_4:54827650-54827669 None:intergenic 45.0%
TTGGAATACTGGTGGTCCAA+AGG - chr2_4:54827662-54827681 Msa0335740:intron 45.0%
!! TGAGTTTTGACGGGTCTTCA+GGG + chr2_4:54828181-54828200 None:intergenic 45.0%
!! ATGAGTTTTGACGGGTCTTC+AGG + chr2_4:54828182-54828201 None:intergenic 45.0%
TAAATCCGGTTGGAGTGTGA+AGG + chr2_4:54828226-54828245 None:intergenic 45.0%
TGGCAACCACCTTTGCAAAA+AGG - chr2_4:54828290-54828309 Msa0335740:intron 45.0%
AAGGCTATATTCCTACCCGA+TGG - chr2_4:54828332-54828351 Msa0335740:intron 45.0%
AGTCATCATAACCATCGGGT+AGG + chr2_4:54828346-54828365 None:intergenic 45.0%
AAGCTTAAGACGCTCCCATA+CGG + chr2_4:54828396-54828415 None:intergenic 45.0%
! GTTCTTCAGCCCATTTTCCT+AGG + chr2_4:54828454-54828473 None:intergenic 45.0%
ATGTTTGGAAGAGGCCATTG+GGG - chr2_4:54828541-54828560 Msa0335740:CDS 45.0%
TAACTCTTCCATGTCCCCAA+TGG + chr2_4:54828558-54828577 None:intergenic 45.0%
GGAGAAAAAGAAGGCGGAAT+CGG - chr2_4:54828598-54828617 Msa0335740:intron 45.0%
GAGAAAAAGAAGGCGGAATC+GGG - chr2_4:54828599-54828618 Msa0335740:intron 45.0%
AGAAAAAGAAGGCGGAATCG+GGG - chr2_4:54828600-54828619 Msa0335740:intron 45.0%
GAACCGGTATCATCTTCATC+TGG + chr2_4:54828629-54828648 None:intergenic 45.0%
!!! GAGTTTTGGGTCTATTGAGC+AGG - chr2_4:54828730-54828749 Msa0335740:intron 45.0%
! TTCTAGCAGCCTTATCTCTG+CGG - chr2_4:54828823-54828842 Msa0335740:intron 45.0%
GGTGCATTATGTTCAGCAGA+TGG - chr2_4:54829146-54829165 Msa0335740:intron 45.0%
ACCACGTAGTTGAACTCAAG+TGG - chr2_4:54829318-54829337 Msa0335740:intron 45.0%
ACCACTTGAGTTCAACTACG+TGG + chr2_4:54829322-54829341 None:intergenic 45.0%
ATGCTTGTAACACTGTGCCA+AGG - chr2_4:54829551-54829570 Msa0335740:intron 45.0%
GATCCAACCTTGTTCCAGAA+TGG + chr2_4:54829727-54829746 None:intergenic 45.0%
ATGTGATCAATGTGTTGCGC+AGG + chr2_4:54829766-54829785 None:intergenic 45.0%
ATCAGCGATGTGAAAACAGC+TGG - chr2_4:54829784-54829803 Msa0335740:CDS 45.0%
TTCAGGTGGGAGATTTCTTG+AGG - chr2_4:54829894-54829913 Msa0335740:CDS 45.0%
GAAGAATGAGTGGCAACATG+TGG - chr2_4:54829977-54829996 Msa0335740:CDS 45.0%
! AGTGAGCATAGGTTTTGCCT+CGG - chr2_4:54830161-54830180 Msa0335740:CDS 45.0%
!!! ATAATTTATTTATTTGTTTT+TGG + chr2_4:54824505-54824524 None:intergenic 5.0%
!!! TTTTCAAATTTATAAAAAAA+GGG - chr2_4:54825547-54825566 Msa0335740:intron 5.0%
!!! GTGGTGGTGGTTTTTGGAAG+CGG + chr2_4:54821803-54821822 None:intergenic 50.0%
!!! ATCGGAGGGGTTTTTGGAGT+CGG + chr2_4:54821829-54821848 None:intergenic 50.0%
TTCGACATCGAGGTCGTCTT+GGG + chr2_4:54821889-54821908 None:intergenic 50.0%
ATTCGACATCGAGGTCGTCT+TGG + chr2_4:54821890-54821909 None:intergenic 50.0%
!!! GACTGGTGCTTCGGTGTTTT+GGG + chr2_4:54821934-54821953 None:intergenic 50.0%
! TTGTTCTGGGTCGAATTCGG+AGG + chr2_4:54821961-54821980 None:intergenic 50.0%
GTCCCAACCAGTACCAGTAA+TGG + chr2_4:54822150-54822169 None:intergenic 50.0%
! CTTTTGCTACGCCTGAGGAA+TGG - chr2_4:54822174-54822193 Msa0335740:CDS 50.0%
CTTCATAAATGGCCCGACTC+TGG - chr2_4:54822852-54822871 Msa0335740:intron 50.0%
AATCGCAGCCGGCACAAAAT+AGG + chr2_4:54823347-54823366 None:intergenic 50.0%
CCAGTATTGTCAATCGCAGC+CGG + chr2_4:54823358-54823377 None:intergenic 50.0%
! CTTCTCCAGATGGACTTGTC+AGG - chr2_4:54823472-54823491 Msa0335740:CDS 50.0%
!! GGTTTAGGTGGTAGTGGAAG+TGG - chr2_4:54823551-54823570 Msa0335740:CDS 50.0%
TTGTCTGTGTGTGTTGGGGT+TGG - chr2_4:54823813-54823832 Msa0335740:CDS 50.0%
!! ACCTTTTGACTACGCCCCTA+CGG + chr2_4:54823891-54823910 None:intergenic 50.0%
TTGCCTGGTTGTGTGACCAT+AGG - chr2_4:54824007-54824026 Msa0335740:intron 50.0%
TGCCTGGTTGTGTGACCATA+GGG - chr2_4:54824008-54824027 Msa0335740:intron 50.0%
!!! GCCCAATTGGCTTTTGCATG+TGG + chr2_4:54824139-54824158 None:intergenic 50.0%
GTTTGTGCATCAGGCCCAAT+TGG + chr2_4:54824152-54824171 None:intergenic 50.0%
! CAGCGGTTTGTTTGTGCATC+AGG + chr2_4:54824161-54824180 None:intergenic 50.0%
CCGCTGACCAACACATTACT+TGG - chr2_4:54824175-54824194 Msa0335740:intron 50.0%
GGACAATAATATGCCGGGGT+CGG - chr2_4:54824444-54824463 Msa0335740:intron 50.0%
GACAATAATATGCCGGGGTC+GGG - chr2_4:54824445-54824464 Msa0335740:intron 50.0%
ACAATAATATGCCGGGGTCG+GGG - chr2_4:54824446-54824465 Msa0335740:intron 50.0%
CGTAGCTTAGTCGGGAATCT+AGG + chr2_4:54824479-54824498 None:intergenic 50.0%
TTTGGTCGCGTAGCTTAGTC+GGG + chr2_4:54824487-54824506 None:intergenic 50.0%
!!! ATACATGTTTTGGTGGGGGG+TGG - chr2_4:54824561-54824580 Msa0335740:CDS 50.0%
CATATTGAAGGGGGAAGCAG+GGG + chr2_4:54824598-54824617 None:intergenic 50.0%
GACATATTGAAGGGGGAAGC+AGG + chr2_4:54824600-54824619 None:intergenic 50.0%
CCCCTTCAATATGTCCCTGT+TGG - chr2_4:54824605-54824624 Msa0335740:CDS 50.0%
! CGGCTTCATGGTAATGATCG+AGG - chr2_4:54824750-54824769 Msa0335740:intron 50.0%
ATGGTTTCGAAACGACCCAG+AGG - chr2_4:54824939-54824958 Msa0335740:intron 50.0%
TGGTTTCGAAACGACCCAGA+GGG - chr2_4:54824940-54824959 Msa0335740:intron 50.0%
CCGGGAACAGGTTCTATAAC+AGG + chr2_4:54824991-54825010 None:intergenic 50.0%
GAAGAAGCAATGCGAGCTGA+AGG - chr2_4:54825116-54825135 Msa0335740:intron 50.0%
TGTCCCCAGAAGAGAGAGAA+TGG - chr2_4:54825162-54825181 Msa0335740:intron 50.0%
ATGAAGCATGGGAGGATGCA+TGG - chr2_4:54825428-54825447 Msa0335740:intron 50.0%
AAAAAAGGGGGAGAGGAAGC+TGG - chr2_4:54825561-54825580 Msa0335740:intron 50.0%
TGTCAATTTCAGCTGCACGC+TGG - chr2_4:54826227-54826246 Msa0335740:intron 50.0%
TTTCAGCTGCACGCTGGTAT+AGG - chr2_4:54826233-54826252 Msa0335740:intron 50.0%
GTTCACAAACATGCGAGCCT+TGG + chr2_4:54826273-54826292 None:intergenic 50.0%
AAGAAGGAGATGTCGGAGGA+AGG + chr2_4:54826594-54826613 None:intergenic 50.0%
GTAGCAAGTCTGTCACGCTT+AGG + chr2_4:54827065-54827084 None:intergenic 50.0%
GCTGTTCCATGCAGTTATCC+TGG - chr2_4:54827117-54827136 Msa0335740:intron 50.0%
CTCCATCCAGGATAACTGCA+TGG + chr2_4:54827126-54827145 None:intergenic 50.0%
TGAAGGAGAGGATGTGTGGA+TGG - chr2_4:54827421-54827440 Msa0335740:intron 50.0%
GCTGGCATAGGTATCCTAAG+GGG + chr2_4:54827638-54827657 None:intergenic 50.0%
CAGCTGGCATAGGTATCCTA+AGG + chr2_4:54827640-54827659 None:intergenic 50.0%
GATACCTATGCCAGCTGAGT+TGG - chr2_4:54827643-54827662 Msa0335740:intron 50.0%
! TGCCAGCTGAGTTGGAATAC+TGG - chr2_4:54827651-54827670 Msa0335740:intron 50.0%
CACCAGTATTCCAACTCAGC+TGG + chr2_4:54827656-54827675 None:intergenic 50.0%
! CAGCTGAGTTGGAATACTGG+TGG - chr2_4:54827654-54827673 Msa0335740:intron 50.0%
TCTCCTCTGGTCAAGGGATT+TGG + chr2_4:54828109-54828128 None:intergenic 50.0%
!! GGAGGCTTGTTATTCTCCTC+TGG + chr2_4:54828122-54828141 None:intergenic 50.0%
GTTGGAGTGTGAAGGATGAG+AGG + chr2_4:54828218-54828237 None:intergenic 50.0%
CTCATCCTTCACACTCCAAC+CGG - chr2_4:54828218-54828237 Msa0335740:intron 50.0%
GATCAGCAGAAGGGAAAACC+CGG - chr2_4:54828764-54828783 Msa0335740:intron 50.0%
CACAACTCACCGCAGAGATA+AGG + chr2_4:54828835-54828854 None:intergenic 50.0%
GTCAGTTTCCCTCCTGTGAT+TGG - chr2_4:54829811-54829830 Msa0335740:CDS 50.0%
! CCTTTTGGCCAATCACAGGA+GGG + chr2_4:54829822-54829841 None:intergenic 50.0%
! CCTCCTGTGATTGGCCAAAA+GGG - chr2_4:54829820-54829839 Msa0335740:CDS 50.0%
! CTACCCTTTTGGCCAATCAC+AGG + chr2_4:54829826-54829845 None:intergenic 50.0%
! CTGTGATTGGCCAAAAGGGT+AGG - chr2_4:54829824-54829843 Msa0335740:CDS 50.0%
!! GTGGTTTTTGGAAGCGGCGA+AGG + chr2_4:54821797-54821816 None:intergenic 55.0%
!!! TTTTTGGAGTCGGAGGGTGG+TGG + chr2_4:54821819-54821838 None:intergenic 55.0%
!!! GAGGGGTTTTTGGAGTCGGA+GGG + chr2_4:54821825-54821844 None:intergenic 55.0%
! GTCGGAATCGGAGGGGTTTT+TGG + chr2_4:54821835-54821854 None:intergenic 55.0%
GGATGAGTCGGAGTCGGAAT+CGG + chr2_4:54821847-54821866 None:intergenic 55.0%
TTCTGCGTCGGAGGATGAGT+CGG + chr2_4:54821859-54821878 None:intergenic 55.0%
GGTTTCTGATTCTGCGTCGG+AGG + chr2_4:54821868-54821887 None:intergenic 55.0%
!!! GGACTGGTGCTTCGGTGTTT+TGG + chr2_4:54821935-54821954 None:intergenic 55.0%
CCTCAGGCGTAGCAAAAGCA+GGG + chr2_4:54822172-54822191 None:intergenic 55.0%
TCCTCAGGCGTAGCAAAAGC+AGG + chr2_4:54822173-54822192 None:intergenic 55.0%
CCGGCTGCGATTGACAATAC+TGG - chr2_4:54823355-54823374 Msa0335740:CDS 55.0%
TCTGTGTGTGTTGGGGTTGG+AGG - chr2_4:54823816-54823835 Msa0335740:CDS 55.0%
CTGTGTGTGTTGGGGTTGGA+GGG - chr2_4:54823817-54823836 Msa0335740:CDS 55.0%
TGTGTGTGTTGGGGTTGGAG+GGG - chr2_4:54823818-54823837 Msa0335740:CDS 55.0%
! TGGGGTTGGAGGGGACTTTT+AGG - chr2_4:54823827-54823846 Msa0335740:CDS 55.0%
! TCCGTAGGGGCGTAGTCAAA+AGG - chr2_4:54823887-54823906 Msa0335740:intron 55.0%
GCCTGGTTGTGTGACCATAG+GGG - chr2_4:54824009-54824028 Msa0335740:intron 55.0%
TCCCCTATGGTCACACAACC+AGG + chr2_4:54824013-54824032 None:intergenic 55.0%
TGTCTCAGTTGGGAGCTGCA+AGG - chr2_4:54824423-54824442 Msa0335740:CDS 55.0%
ACATACTTGGACCCGGGAAC+AGG + chr2_4:54825003-54825022 None:intergenic 55.0%
ACGATAGCGACCTTTCTCCC+TGG + chr2_4:54825396-54825415 None:intergenic 55.0%
CTGGTCAGATGAAGCATGGG+AGG - chr2_4:54825420-54825439 Msa0335740:intron 55.0%
CATGGGAGGATGCATGGATG+TGG - chr2_4:54825434-54825453 Msa0335740:intron 55.0%
AGGTGAAGTTGCTGCTGCCA+AGG - chr2_4:54826253-54826272 Msa0335740:intron 55.0%
TGGCAAGAAGGAGATGTCGG+AGG + chr2_4:54826598-54826617 None:intergenic 55.0%
! TGCACCGATCAAGGGCTAAC+AGG + chr2_4:54826777-54826796 None:intergenic 55.0%
CCTCTGGTCAAGGGATTTGG+AGG + chr2_4:54828106-54828125 None:intergenic 55.0%
CCTCCAAATCCCTTGACCAG+AGG - chr2_4:54828103-54828122 Msa0335740:intron 55.0%
GCTCGGGTTCCTTGTTAAGC+AGG + chr2_4:54828154-54828173 None:intergenic 55.0%
! TTTGACGGGTCTTCAGGGTC+AGG + chr2_4:54828176-54828195 None:intergenic 55.0%
TGTTGCGCAGGAACTAACCC+TGG + chr2_4:54829754-54829773 None:intergenic 55.0%
! CCCTCCTGTGATTGGCCAAA+AGG - chr2_4:54829819-54829838 Msa0335740:CDS 55.0%
! CCCTTTTGGCCAATCACAGG+AGG + chr2_4:54829823-54829842 None:intergenic 55.0%
! CGGCTTTCAGCCTACCCTTT+TGG + chr2_4:54829837-54829856 None:intergenic 55.0%
AAGGGTAGGCTGAAAGCCGT+CGG - chr2_4:54829838-54829857 Msa0335740:CDS 55.0%
! CGGTCGAGTCTGAGACATAG+AGG + chr2_4:54829923-54829942 None:intergenic 55.0%
TGGCAACATGTGGCTGCATG+CGG - chr2_4:54829987-54830006 Msa0335740:CDS 55.0%
TCCTTCGTGTCTCTATGCCG+AGG + chr2_4:54830181-54830200 None:intergenic 55.0%
!!! CGGAGGGTGGTGGTGGTTTT+TGG + chr2_4:54821809-54821828 None:intergenic 60.0%
!!! GGGTTTTTGGAGTCGGAGGG+TGG + chr2_4:54821822-54821841 None:intergenic 60.0%
!!! GGAGGGGTTTTTGGAGTCGG+AGG + chr2_4:54821826-54821845 None:intergenic 60.0%
AGTCGGAGTCGGAATCGGAG+GGG + chr2_4:54821842-54821861 None:intergenic 60.0%
GAGTCGGAGTCGGAATCGGA+GGG + chr2_4:54821843-54821862 None:intergenic 60.0%
TGAGTCGGAGTCGGAATCGG+AGG + chr2_4:54821844-54821863 None:intergenic 60.0%
GTCGGAGGATGAGTCGGAGT+CGG + chr2_4:54821853-54821872 None:intergenic 60.0%
TCGAATTCGGAGGCTGGGAC+TGG + chr2_4:54821951-54821970 None:intergenic 60.0%
CTGGGTCGAATTCGGAGGCT+GGG + chr2_4:54821956-54821975 None:intergenic 60.0%
TCTGGGTCGAATTCGGAGGC+TGG + chr2_4:54821957-54821976 None:intergenic 60.0%
!! CCCTGCTTTTGCTACGCCTG+AGG - chr2_4:54822169-54822188 Msa0335740:CDS 60.0%
CCTACGGTAGCAGTCCCCTA+TGG + chr2_4:54824026-54824045 None:intergenic 60.0%
CCATAGGGGACTGCTACCGT+AGG - chr2_4:54824023-54824042 Msa0335740:intron 60.0%
CACAGGACTGATAGGGGAGC+TGG - chr2_4:54824069-54824088 Msa0335740:intron 60.0%
TAGGTTTCGAACCCCGACCC+CGG + chr2_4:54824460-54824479 None:intergenic 60.0%
!!! ATGTTTTGGTGGGGGGTGGC+TGG - chr2_4:54824565-54824584 Msa0335740:CDS 60.0%
!!! TGTTTTGGTGGGGGGTGGCT+GGG - chr2_4:54824566-54824585 Msa0335740:CDS 60.0%
CGAAACGACCCAGAGGGTCA+TGG - chr2_4:54824946-54824965 Msa0335740:intron 60.0%
GAGGATGTGTGGATGGCACC+TGG - chr2_4:54827428-54827447 Msa0335740:intron 60.0%
GGAAGAGGCCATTGGGGACA+TGG - chr2_4:54828547-54828566 Msa0335740:CDS 60.0%
GCCTCGGCATAGAGACACGA+AGG - chr2_4:54830177-54830196 Msa0335740:CDS 60.0%
! TTGGAGTCGGAGGGTGGTGG+TGG + chr2_4:54821816-54821835 None:intergenic 65.0%
! GGAGGCTGGGACTGGTGCTT+CGG + chr2_4:54821943-54821962 None:intergenic 65.0%
GGGTCTTCAGGGTCAGGCTC+GGG + chr2_4:54828170-54828189 None:intergenic 65.0%
CGGGTCTTCAGGGTCAGGCT+CGG + chr2_4:54828171-54828190 None:intergenic 65.0%
GCTGCATGCGGCACCAGAGA+GGG - chr2_4:54829999-54830018 Msa0335740:CDS 65.0%
TTGGTGGGGGGTGGCTGGGT+TGG - chr2_4:54824570-54824589 Msa0335740:CDS 70.0%
GGCTGCATGCGGCACCAGAG+AGG - chr2_4:54829998-54830017 Msa0335740:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 54821652 54830356 54821652 ID=Msa0335740;Name=Msa0335740
chr2_4 mRNA 54821652 54830356 54821652 ID=Msa0335740-mRNA-1;Parent=Msa0335740;Name=Msa0335740-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|0.9|0.90|1|1|1|11|240|834
chr2_4 exon 54821652 54822311 54821652 ID=Msa0335740-mRNA-1:exon:16643;Parent=Msa0335740-mRNA-1
chr2_4 exon 54823164 54823885 54823164 ID=Msa0335740-mRNA-1:exon:16642;Parent=Msa0335740-mRNA-1
chr2_4 exon 54824325 54824451 54824325 ID=Msa0335740-mRNA-1:exon:16641;Parent=Msa0335740-mRNA-1
chr2_4 exon 54824536 54824639 54824536 ID=Msa0335740-mRNA-1:exon:16640;Parent=Msa0335740-mRNA-1
chr2_4 exon 54825703 54825769 54825703 ID=Msa0335740-mRNA-1:exon:16639;Parent=Msa0335740-mRNA-1
chr2_4 exon 54825872 54825934 54825872 ID=Msa0335740-mRNA-1:exon:16638;Parent=Msa0335740-mRNA-1
chr2_4 exon 54826551 54826611 54826551 ID=Msa0335740-mRNA-1:exon:16637;Parent=Msa0335740-mRNA-1
chr2_4 exon 54826723 54826896 54826723 ID=Msa0335740-mRNA-1:exon:16636;Parent=Msa0335740-mRNA-1
chr2_4 exon 54826992 54827081 54826992 ID=Msa0335740-mRNA-1:exon:16635;Parent=Msa0335740-mRNA-1
chr2_4 exon 54828515 54828586 54828515 ID=Msa0335740-mRNA-1:exon:16634;Parent=Msa0335740-mRNA-1
chr2_4 exon 54829618 54830356 54829618 ID=Msa0335740-mRNA-1:exon:16633;Parent=Msa0335740-mRNA-1
chr2_4 five_prime_UTR 54830223 54830356 54830223 ID=Msa0335740-mRNA-1:five_prime_utr;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54829618 54830222 54829618 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54828515 54828586 54828515 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54826992 54827081 54826992 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54826723 54826896 54826723 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54826551 54826611 54826551 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54825872 54825934 54825872 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54825703 54825769 54825703 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54824536 54824639 54824536 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54824325 54824451 54824325 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54823164 54823885 54823164 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 CDS 54821892 54822311 54821892 ID=Msa0335740-mRNA-1:cds;Parent=Msa0335740-mRNA-1
chr2_4 three_prime_UTR 54821652 54821891 54821652 ID=Msa0335740-mRNA-1:three_prime_utr;Parent=Msa0335740-mRNA-1
Gene Sequence

>Msa0335740

ATGTTTCTCCTTCGCCGCTTCCAAAAACCACCACCACCCTCCGACTCCAAAAACCCCTCCGATTCCGACTCCGACTCATCCTCCGACGCAGAATCAGAAACCCAAGACGACCTCGATGTCGAATCTTATCTCAACTCATTCATCGCCCAAAACACCGAAGCACCAGTCCCAGCCTCCGAATTCGACCCAGAACAAAACTTCAAAGACGTAATCGAAGCTTATCATTCCGAAAAAGTTCAAAAATACTACGACAAAAAAACTCGTCGCAAGGTTAAACATCGTAACCCGTTTGATTTTCCACCTGATGATGAGAATTGGAAAGAAGAAGATTTGAGAGAGCTTTGGGATAATGGGAATAACACCATTACTGGTACTGGTTGGGACCCTGCTTTTGCTACGCCTGAGGAATGGGAATATGTGAAGTGGAAGCATTATAAGGGACAAGATGTTCCTATTGCTCCTTTTTATCTTCCTTATAGGAAACCTATTCCTCCTGTACCTACTAATCATTCTGCTATTAAAGGTCCTAAAGATGTTATTGAAGAATTGGATAGGATTGAAGAGTTTCTCAAATGGGTTAGCTATGTTTTTGAAGATGGTAGCACATATGAAGGAACTCTTTGGGATGATATTGCTCAAGGAAAAGGTGTTTATACTTCTCCAGATGGACTTGTCAGGTATGAAGGTGAATGGTTTCGAAACGACCCAGAGGGTCATGGTGTTATTGAAGTTGAAGTACCTGTTATAGAACCTGTTCCCGGGTCCAAACTTGAAGAAGCAATGCGAGCTGAAGGGAAGATAATAAAAAGGGATTTTATGTCCCCAGAAGAGAGAGAATGGCTTGATAAGGATATTGAAGATAGTTATCTTCTTGCAAATGGCAACTTTGAAGTCCCCTATTATGAGAGGGATGAATGGGTTAAGGAGTTTGGAGAAAAGCCGGAGAAAGGTCGCTATCGTTATGCTGGTCAGATGAAGCATGGGAGGATGCATGGATGTGGTGGTAGATTTTATTTTGGAGAAATATTGGATGATGATGAGGGATGTGATGACCAAACTTCAGCGCTGCACGCTGGTATAGGTGAAGTTGCTGCTGCCAAGGCTCGCATGTTTGTGAACAAGCCAGATGGAATGGTTAGAGAAAAGAGAGGTCCGTATAATGATCCACAGCATGCTTACTTGTATGAAGGAGAGGATGTGTGGATGGCACCTGGCTTCATTAACCAATTTTATGAAGTTCCTGATTACTGGAAAACATACGCGCATGAAGTAGATCAGGAAAGAGAAATGTGGTTGAACTCTTTCTATAGATCTCCCCTTAGGATACCTATGCCAGCTGAGTTGGAATACTGGTGGTCCAAAGAGGAGAATAACAAGCCTCCTGAATTTGTCCTGCTTAACAAGGAACCCGAGCCTGACCCTGAAGACCCGTCAAAACTCATATATACTGAGGATCCTCTCATCCTTCACACTCCAACCGGATTTATCATCAATTATGTCGAGGATGAGAAATATGGAATACGTATGTTCTGGCAACCACCTTTGCAAAAAGGTGAGAAAGTTGACCCTAAAAAGGCTATATTCCTACCCGATGGTTATGATGACTTTTTTGGGATAGATAAGAACAAAAAGACCGTATGGGAGCGTCTTAAGCTTGCAATTGAAAAAGTGTCCAAGCCATGGTTTGATAACCTAGGAAAATGGGCTGAAGAACAGAAGAAAATTAGTGAAATGAAAAAGGAGGCACTTGAGAAAGAACTTGAACTGATAGAAGCTGAATTATGTTTGGAAGAGGCCATTGGGGACATGGAAGAGTTATTGCGTAGAAGAGAGAAAGAGGAGAAAAAGAAGGCGGAATCGGGGTTGCCAGATGAAGATGATACCGGTTCTGTAGTCAAACAAGATGAAAAAGCCCGTGTAGATGAAGAAGATGAAGATGATGAGGAAGACGAAGATGATATTGCACCATCGAGTTTTGGGTCTATTGAGCAGGAATCAAAGACAGATCAGCAGAAGGGAAAACCCGGCAAATCACCATTTTCTACAACTTCACTAGCATTTACTTCTAGCAGCCTTATCTCTGCGGTTCCATCAAAGCTGCAACAATCATTTCCATTCTGGAACAAGGTTGGATCAAAACCAGGGTTAGTTCCTGCGCAACACATTGATCACATCAGCGATGTGAAAACAGCTGGTTCAGTCAGTTTCCCTCCTGTGATTGGCCAAAAGGGTAGGCTGAAAGCCGTCGGTAAAGCACATGAAAAAGTTGAGTCAAGAAGTTATTCAGGTGGGAGATTTCTTGAGGCATCCTCTATGTCTCAGACTCGACCGTGTTATACGACTTCAAAAAGTAACTCAAAAGAGCGAAGAATGAGTGGCAACATGTGGCTGCATGCGGCACCAGAGAGGGATTTAGACAACATACTCTCTCTGCATTCAGCTTCATCAATGTACAATTTTTATCCAAACATCCAAAGAGAACCTCACTTCAAATTTAAGCTTTGA
Protein sequence

>Msa0335740

MFLLRRFQKPPPPSDSKNPSDSDSDSSSDAESETQDDLDVESYLNSFIAQNTEAPVPASEFDPEQNFKDVIEAYHSEKVQKYYDKKTRRKVKHRNPFDFPPDDENWKEEDLRELWDNGNNTITGTGWDPAFATPEEWEYVKWKHYKGQDVPIAPFYLPYRKPIPPVPTNHSAIKGPKDVIEELDRIEEFLKWVSYVFEDGSTYEGTLWDDIAQGKGVYTSPDGLVRYEGEWFRNDPEGHGVIEVEVPVIEPVPGSKLEEAMRAEGKIIKRDFMSPEEREWLDKDIEDSYLLANGNFEVPYYERDEWVKEFGEKPEKGRYRYAGQMKHGRMHGCGGRFYFGEILDDDEGCDDQTSALHAGIGEVAAAKARMFVNKPDGMVREKRGPYNDPQHAYLYEGEDVWMAPGFINQFYEVPDYWKTYAHEVDQEREMWLNSFYRSPLRIPMPAELEYWWSKEENNKPPEFVLLNKEPEPDPEDPSKLIYTEDPLILHTPTGFIINYVEDEKYGIRMFWQPPLQKGEKVDPKKAIFLPDGYDDFFGIDKNKKTVWERLKLAIEKVSKPWFDNLGKWAEEQKKISEMKKEALEKELELIEAELCLEEAIGDMEELLRRREKEEKKKAESGLPDEDDTGSVVKQDEKARVDEEDEDDEEDEDDIAPSSFGSIEQESKTDQQKGKPGKSPFSTTSLAFTSSSLISAVPSKLQQSFPFWNKVGSKPGLVPAQHIDHISDVKTAGSVSFPPVIGQKGRLKAVGKAHEKVESRSYSGGRFLEASSMSQTRPCYTTSKSNSKERRMSGNMWLHAAPERDLDNILSLHSASSMYNFYPNIQREPHFKFKL*