Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359660 | XP_003588866.1 | 94.096 | 542 | 21 | 3 | 1 | 532 | 1 | 541 | 0.0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359660 | sp|Q9M084|SYDC2_ARATH | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359660 | G7I885 | 94.096 | 542 | 21 | 3 | 1 | 532 | 1 | 541 | 0.0 | 1009 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054720 | Msa1359660 | 0.857125 | 2.019995e-62 | -8.615850e-47 |
| Msa0661180 | Msa1359660 | 0.882399 | 1.075923e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359660 | MtrunA17_Chr1g0150111 | 94.096 | 542 | 21 | 3 | 1 | 532 | 1 | 541 | 0.0 | 1009 |
| Msa1359660 | MtrunA17_Chr5g0410321 | 64.583 | 576 | 129 | 6 | 1 | 532 | 62 | 606 | 0.0 | 712 |
| Msa1359660 | MtrunA17_Chr8g0389541 | 30.961 | 281 | 174 | 8 | 262 | 529 | 275 | 548 | 3.15e-26 | 112 |
| Msa1359660 | MtrunA17_Chr7g0263951 | 31.560 | 282 | 173 | 10 | 262 | 529 | 325 | 600 | 2.43e-25 | 110 |
| Msa1359660 | MtrunA17_Chr2g0298001 | 23.984 | 492 | 325 | 15 | 72 | 524 | 107 | 588 | 2.21e-23 | 103 |
| Msa1359660 | MtrunA17_Chr8g0335841 | 22.289 | 498 | 297 | 18 | 81 | 524 | 111 | 572 | 2.13e-15 | 79.0 |
| Msa1359660 | MtrunA17_Chr4g0072181 | 23.478 | 345 | 228 | 11 | 200 | 511 | 32 | 373 | 7.04e-13 | 70.5 |
| Msa1359660 | MtrunA17_Chr4g0056151 | 42.466 | 73 | 42 | 0 | 455 | 527 | 57 | 129 | 5.90e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359660 | AT4G31180.1 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| Msa1359660 | AT4G31180.2 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| Msa1359660 | AT4G26870.1 | 64.648 | 512 | 173 | 3 | 26 | 532 | 24 | 532 | 0.0 | 684 |
| Msa1359660 | AT5G56680.1 | 30.466 | 279 | 174 | 8 | 262 | 527 | 296 | 567 | 5.42e-27 | 115 |
| Msa1359660 | AT4G17300.2 | 25.482 | 467 | 253 | 15 | 112 | 527 | 160 | 582 | 1.25e-26 | 114 |
| Msa1359660 | AT4G17300.1 | 25.482 | 467 | 253 | 15 | 112 | 527 | 140 | 562 | 1.93e-26 | 113 |
| Msa1359660 | AT1G70980.1 | 28.571 | 280 | 180 | 7 | 262 | 527 | 293 | 566 | 4.13e-23 | 103 |
| Msa1359660 | AT3G07420.1 | 24.907 | 269 | 188 | 8 | 266 | 525 | 368 | 631 | 5.96e-12 | 68.9 |
Find 167 sgRNAs with CRISPR-Local
Find 601 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATTGATTCTTTC+AGG | 0.118251 | tig0016715:+399412 | Msa1359660:CDS |
| CATTGATGTCCCCAAGAATT+TGG | 0.169294 | tig0016715:+396108 | Msa1359660:five_prime_UTR |
| CAGCTTTGCGAGTTCCTTCT+TGG | 0.187183 | tig0016715:-396230 | None:intergenic |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | tig0016715:+396613 | Msa1359660:CDS |
| CACAAGCAAATGTCAATATT+TGG | 0.203397 | tig0016715:+397514 | Msa1359660:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.255342 | tig0016715:+396475 | Msa1359660:CDS |
| AAGTTGACATTGGAGGTTTC+CGG | 0.264653 | tig0016715:-396156 | None:intergenic |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | tig0016715:-397857 | None:intergenic |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | tig0016715:-399108 | None:intergenic |
| TCCCGCTCATTTGCTTTATT+AGG | 0.289865 | tig0016715:-395821 | None:intergenic |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | tig0016715:-398041 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | tig0016715:+396873 | Msa1359660:CDS |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | tig0016715:-396625 | None:intergenic |
| TGGAAAATTCCTTGATTTGC+TGG | 0.311128 | tig0016715:-397182 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | tig0016715:+397598 | Msa1359660:CDS |
| GGGTTGCAATTCCAAATTCT+TGG | 0.322871 | tig0016715:-396119 | None:intergenic |
| TTAATAAATAAGGATTTGTT+AGG | 0.325385 | tig0016715:+391674 | None:intergenic |
| CGTAACAAAATTAATAAATA+AGG | 0.326840 | tig0016715:+395869 | Msa1359660:five_prime_UTR |
| AAGTAAGTCCAAGGCATTAT+TGG | 0.332543 | tig0016715:-399831 | None:intergenic |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | tig0016715:-399107 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | tig0016715:+396501 | Msa1359660:CDS |
| TGGCGTCAAGCTACACCTTC+AGG | 0.350829 | tig0016715:-399811 | None:intergenic |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | tig0016715:-396792 | None:intergenic |
| CATGATGGTATGAAATTGTT+TGG | 0.357276 | tig0016715:+400192 | Msa1359660:three_prime_UTR |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | tig0016715:+397578 | Msa1359660:CDS |
| GGTTGCAATTCCAAATTCTT+GGG | 0.368431 | tig0016715:-396118 | None:intergenic |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | tig0016715:+397412 | Msa1359660:CDS |
| TCAACTTCGGTCCAGTCGTC+AGG | 0.376176 | tig0016715:-396367 | None:intergenic |
| CAAGAGGATAGGAATGAAAT+TGG | 0.382453 | tig0016715:+395750 | Msa1359660:five_prime_UTR |
| CAAGAGGATAGGAATGAAAT+AGG | 0.388483 | tig0016715:+391749 | Msa1359660:five_prime_UTR |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | tig0016715:-399078 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | tig0016715:-396270 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | tig0016715:+399630 | Msa1359660:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | tig0016715:+397121 | Msa1359660:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | tig0016715:+397615 | Msa1359660:CDS |
| CAAGAAGGAACTCGCAAAGC+TGG | 0.423555 | tig0016715:+396231 | Msa1359660:CDS |
| CAAAGGGAAACCTGCATGCC+TGG | 0.426932 | tig0016715:+397474 | Msa1359660:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | tig0016715:+397443 | Msa1359660:CDS |
| ATGTGATTGAGTGATAAATA+TGG | 0.439555 | tig0016715:+400064 | Msa1359660:three_prime_UTR |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | tig0016715:+398858 | Msa1359660:CDS |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | tig0016715:-397847 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | tig0016715:-396529 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | tig0016715:-397172 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | tig0016715:+397447 | Msa1359660:CDS |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | tig0016715:+397639 | Msa1359660:CDS |
| TTAGGTGAGGAGATAATATC+AGG | 0.470682 | tig0016715:+399315 | Msa1359660:intron |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | tig0016715:+396627 | Msa1359660:CDS |
| GAGTCTATTGTCGATGTTGA+AGG | 0.473757 | tig0016715:+396580 | Msa1359660:CDS |
| TTACAGTTCCAACTTGAGAC+TGG | 0.475421 | tig0016715:-397208 | None:intergenic |
| AATGCCATCTTCTTCCCAAC+TGG | 0.476125 | tig0016715:-396454 | None:intergenic |
| TTAAGATCTTTAGGAGCTGA+TGG | 0.477807 | tig0016715:+400151 | Msa1359660:three_prime_UTR |
| CTTTGCGAGTTCCTTCTTGG+AGG | 0.479823 | tig0016715:-396227 | None:intergenic |
| AAAATAATTGATGATGTTGA+AGG | 0.484253 | tig0016715:+395956 | Msa1359660:five_prime_UTR |
| TGGGGACATCAATGAGCCTA+TGG | 0.485195 | tig0016715:-396099 | None:intergenic |
| ACATTGGAGGTTTCCGGAGA+AGG | 0.487766 | tig0016715:-396150 | None:intergenic |
| AACCCTAGCAATACCTTCTC+CGG | 0.488131 | tig0016715:+396137 | Msa1359660:five_prime_UTR |
| TGAGATTCTGAAGTTGACAT+TGG | 0.488423 | tig0016715:-396166 | None:intergenic |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | tig0016715:+399641 | Msa1359660:CDS |
| GCAGCATCCTCGATATTAAA+CGG | 0.494569 | tig0016715:-396838 | None:intergenic |
| TCACCACACCCACTTTGAAA+AGG | 0.495870 | tig0016715:+400016 | Msa1359660:three_prime_UTR |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | tig0016715:+396387 | Msa1359660:CDS |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | tig0016715:+396495 | Msa1359660:CDS |
| TTTGTTTCTGATGACAGTGT+CGG | 0.500363 | tig0016715:-396193 | None:intergenic |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | tig0016715:-399062 | None:intergenic |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | tig0016715:-399056 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | tig0016715:-398873 | None:intergenic |
| TCATTGAGCTCCCTGACGAC+TGG | 0.506929 | tig0016715:+396356 | Msa1359660:CDS |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | tig0016715:-397418 | None:intergenic |
| GATTCTGAAGTTGACATTGG+AGG | 0.510514 | tig0016715:-396163 | None:intergenic |
| TTTCACCGTCAACTTGGAGC+TGG | 0.511610 | tig0016715:+399901 | Msa1359660:three_prime_UTR |
| GGTGACTGAGCCAGGCATGC+AGG | 0.511713 | tig0016715:-397484 | None:intergenic |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | tig0016715:-396611 | None:intergenic |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | tig0016715:-396616 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | tig0016715:+396440 | Msa1359660:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | tig0016715:+396439 | Msa1359660:CDS |
| TTCCACATCCAGTCTCAAGT+TGG | 0.521976 | tig0016715:+397200 | Msa1359660:CDS |
| TAACACCAGCTCCAAGTTGA+CGG | 0.522048 | tig0016715:-399906 | None:intergenic |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | tig0016715:-397846 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | tig0016715:-399050 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | tig0016715:+398050 | Msa1359660:CDS |
| TTTCCGGAGAAGGTATTGCT+AGG | 0.528622 | tig0016715:-396140 | None:intergenic |
| CATGCAGTTCTATATGAAGC+GGG | 0.529598 | tig0016715:-399982 | None:intergenic |
| AATGAATATATATACCTGAA+TGG | 0.529761 | tig0016715:-396887 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | tig0016715:+396801 | Msa1359660:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | tig0016715:-397856 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | tig0016715:-396429 | None:intergenic |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | tig0016715:+397173 | Msa1359660:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | tig0016715:-397492 | None:intergenic |
| TCTTTAGGCTGGACTACAAA+GGG | 0.538957 | tig0016715:+397458 | Msa1359660:CDS |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | tig0016715:+398899 | Msa1359660:CDS |
| TACTCTGCCGTTTAATATCG+AGG | 0.540763 | tig0016715:+396831 | Msa1359660:CDS |
| AACAAGCAGGTTCTAATCCG+TGG | 0.542895 | tig0016715:+396412 | Msa1359660:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | tig0016715:-396281 | None:intergenic |
| TCGATATTAAACGGCAGAGT+AGG | 0.544830 | tig0016715:-396829 | None:intergenic |
| CGGCGGCAACTTCTCGGCGG+CGG | 0.544898 | tig0016715:-396264 | None:intergenic |
| ACCTAATAAAGCAAATGAGC+GGG | 0.545231 | tig0016715:+395820 | Msa1359660:five_prime_UTR |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | tig0016715:+399636 | Msa1359660:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | tig0016715:+397798 | Msa1359660:CDS |
| GCTTGACGCCAATAATGCCT+TGG | 0.549853 | tig0016715:+399823 | Msa1359660:three_prime_UTR |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | tig0016715:-399063 | None:intergenic |
| CGTCAGGGAGCTCAATGAGC+GGG | 0.553502 | tig0016715:-396351 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | tig0016715:-397505 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | tig0016715:-397587 | None:intergenic |
| TTCCAACTTGAGACTGGATG+TGG | 0.562506 | tig0016715:-397202 | None:intergenic |
| TTCCGGAGAAGGTATTGCTA+GGG | 0.566546 | tig0016715:-396139 | None:intergenic |
| AAATGCTAATAACATCATCA+TGG | 0.570368 | tig0016715:-399744 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | tig0016715:-396284 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | tig0016715:+399037 | Msa1359660:CDS |
| ATTAAACGGCAGAGTAGGAA+TGG | 0.575600 | tig0016715:-396824 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | tig0016715:-399093 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | tig0016715:+399369 | Msa1359660:CDS |
| CACATTCAACTGAAGCCTGA+AGG | 0.578547 | tig0016715:+399796 | Msa1359660:three_prime_UTR |
| GTTGCAATTCCAAATTCTTG+GGG | 0.580607 | tig0016715:-396117 | None:intergenic |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | tig0016715:+396450 | Msa1359660:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | tig0016715:-396563 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | tig0016715:+399377 | Msa1359660:CDS |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | tig0016715:+398891 | Msa1359660:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | tig0016715:-396287 | None:intergenic |
| TGATTCACTGGAGAACAAGC+AGG | 0.586415 | tig0016715:+396399 | Msa1359660:CDS |
| GTCTTTAGGCTGGACTACAA+AGG | 0.586503 | tig0016715:+397457 | Msa1359660:CDS |
| AAACCATAATTGACAGCAAG+GGG | 0.592667 | tig0016715:-396325 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | tig0016715:+398883 | Msa1359660:CDS |
| TGACGACTGGACCGAAGTTG+AGG | 0.595296 | tig0016715:+396369 | Msa1359660:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | tig0016715:+396531 | Msa1359660:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | tig0016715:+397843 | Msa1359660:CDS |
| CAACTTCGGTCCAGTCGTCA+GGG | 0.601964 | tig0016715:-396366 | None:intergenic |
| ACATCCCCTATAAAATCCAT+AGG | 0.602208 | tig0016715:+396083 | Msa1359660:five_prime_UTR |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.603238 | tig0016715:-396290 | None:intergenic |
| ATCATTGAGAGCCTCAACTT+CGG | 0.607801 | tig0016715:-396380 | None:intergenic |
| ATCAAAACCAACCTGTTGTG+AGG | 0.608593 | tig0016715:-396638 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | tig0016715:-396620 | None:intergenic |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | tig0016715:+399047 | Msa1359660:CDS |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | tig0016715:-397411 | None:intergenic |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | tig0016715:-396544 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | tig0016715:+397427 | Msa1359660:CDS |
| ACAAGCAGGTTCTAATCCGT+GGG | 0.615661 | tig0016715:+396413 | Msa1359660:CDS |
| TATTGTCGATGTTGAAGGTG+TGG | 0.616511 | tig0016715:+396585 | Msa1359660:CDS |
| TCAGGCTTCAGTTGAATGTG+AGG | 0.617159 | tig0016715:-399793 | None:intergenic |
| AGCAGGTTCTAATCCGTGGG+AGG | 0.619320 | tig0016715:+396416 | Msa1359660:CDS |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | tig0016715:-399728 | None:intergenic |
| GCATGCAGTTCTATATGAAG+CGG | 0.621106 | tig0016715:-399983 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | tig0016715:-396566 | None:intergenic |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | tig0016715:+396864 | Msa1359660:CDS |
| TGTTTGGAAAAGTAAGTCCA+AGG | 0.629031 | tig0016715:-399840 | None:intergenic |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | tig0016715:+397813 | Msa1359660:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | tig0016715:+397423 | Msa1359660:CDS |
| CAACATCGACAATAGACTCA+CGG | 0.632667 | tig0016715:-396576 | None:intergenic |
| AACCTAATAAAGCAAATGAG+CGG | 0.635132 | tig0016715:+395819 | Msa1359660:five_prime_UTR |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | tig0016715:+399666 | Msa1359660:CDS |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | tig0016715:-396503 | None:intergenic |
| GCAGGTTCTAATCCGTGGGA+GGG | 0.639094 | tig0016715:+396417 | Msa1359660:CDS |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | tig0016715:+398067 | Msa1359660:CDS |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | tig0016715:+397424 | Msa1359660:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | tig0016715:-399633 | None:intergenic |
| ACACTATTAAAATAGTGCTG+TGG | 0.647523 | tig0016715:+399860 | Msa1359660:three_prime_UTR |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | tig0016715:-399729 | None:intergenic |
| TCGTCAGGGAGCTCAATGAG+CGG | 0.662590 | tig0016715:-396352 | None:intergenic |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | tig0016715:+399621 | Msa1359660:intron |
| AAAACCATAATTGACAGCAA+GGG | 0.671638 | tig0016715:-396326 | None:intergenic |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | tig0016715:+396779 | Msa1359660:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.678111 | tig0016715:-399720 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.684255 | tig0016715:-396267 | None:intergenic |
| ATGCAGTTCTATATGAAGCG+GGG | 0.701942 | tig0016715:-399981 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | tig0016715:-399636 | None:intergenic |
| AACCATAATTGACAGCAAGG+GGG | 0.738850 | tig0016715:-396324 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | tig0016715:+398033 | Msa1359660:intron |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | tig0016715:+399624 | Msa1359660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTACAACAATAAA+AGG | - | tig0016715:391944-391963 | None:intergenic | 10.0% |
| !! | TCTTAAAAAATAATATTATG+TGG | + | tig0016715:392058-392077 | Msa1359660:intron | 10.0% |
| !! | CTTAAAAAATAATATTATGT+GGG | + | tig0016715:392059-392078 | Msa1359660:intron | 10.0% |
| !! | CTTAACAAAATTAATAAATA+AGG | + | tig0016715:395665-395684 | Msa1359660:intron | 10.0% |
| !!! | AATTATTTTACAACAATAAA+AGG | - | tig0016715:391944-391963 | None:intergenic | 10.0% |
| !! | TCTTAAAAAATAATATTATG+TGG | + | tig0016715:392058-392077 | Msa1359660:intron | 10.0% |
| !! | CTTAAAAAATAATATTATGT+GGG | + | tig0016715:392059-392078 | Msa1359660:intron | 10.0% |
| !! | AAATATTTGCTTCAAAAAAA+AGG | + | tig0016715:391726-391745 | Msa1359660:five_prime_UTR | 15.0% |
| !! | CGTAACAAAATTAATAAATA+AGG | + | tig0016715:391868-391887 | Msa1359660:intron | 15.0% |
| !! | GAAAAAAAGCTTAAAAATAA+GGG | - | tig0016715:391988-392007 | None:intergenic | 15.0% |
| !! | TGAAAAAAAGCTTAAAAATA+AGG | - | tig0016715:391989-392008 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | + | tig0016715:392735-392754 | Msa1359660:intron | 15.0% |
| !! | AGAATAATATTAGAGAAAAT+AGG | - | tig0016715:393235-393254 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACTTTACTAC+AGG | - | tig0016715:394305-394324 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | + | tig0016715:394350-394369 | Msa1359660:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | - | tig0016715:394573-394592 | None:intergenic | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | + | tig0016715:394573-394592 | Msa1359660:intron | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | + | tig0016715:394762-394781 | Msa1359660:intron | 15.0% |
| !!! | AAATAGTAAGTTTTATAAGT+TGG | - | tig0016715:395357-395376 | None:intergenic | 15.0% |
| !! | ATATGAAATATTTAGTACAT+TGG | + | tig0016715:395465-395484 | Msa1359660:intron | 15.0% |
| !!! | TTAATAAATAAGGATTTGTT+AGG | + | tig0016715:395675-395694 | Msa1359660:intron | 15.0% |
| !! | AAATATTTGCTTCAAAAAAA+AGG | + | tig0016715:391726-391745 | Msa1359660:five_prime_UTR | 15.0% |
| !! | CGTAACAAAATTAATAAATA+AGG | + | tig0016715:391868-391887 | Msa1359660:intron | 15.0% |
| !! | GAAAAAAAGCTTAAAAATAA+GGG | - | tig0016715:391988-392007 | None:intergenic | 15.0% |
| !! | TGAAAAAAAGCTTAAAAATA+AGG | - | tig0016715:391989-392008 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | + | tig0016715:392735-392754 | Msa1359660:intron | 15.0% |
| !! | AGAATAATATTAGAGAAAAT+AGG | - | tig0016715:393235-393254 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACTTTACTAC+AGG | - | tig0016715:394305-394324 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | + | tig0016715:394350-394369 | Msa1359660:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | - | tig0016715:394573-394592 | None:intergenic | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | + | tig0016715:394573-394592 | Msa1359660:intron | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | + | tig0016715:394762-394781 | Msa1359660:intron | 15.0% |
| !! | TCTTAGATAAAAATTAGAAA+GGG | - | tig0016715:400091-400110 | None:intergenic | 15.0% |
| !! | TTCTTAGATAAAAATTAGAA+AGG | - | tig0016715:400092-400111 | None:intergenic | 15.0% |
| !!! | CAAATATTTTCTACACTTTT+AGG | - | tig0016715:391715-391734 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATGGAATTTGTT+AGG | + | tig0016715:391782-391801 | Msa1359660:five_prime_UTR | 20.0% |
| !!! | AAAATAATTGATGATGTTGA+AGG | + | tig0016715:391955-391974 | Msa1359660:intron | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | - | tig0016715:392889-392908 | None:intergenic | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | - | tig0016715:392913-392932 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+CGG | + | tig0016715:393039-393058 | Msa1359660:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | - | tig0016715:393319-393338 | None:intergenic | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | + | tig0016715:393638-393657 | Msa1359660:intron | 20.0% |
| !!! | TCAATTTATTTGTTTTGTAG+TGG | + | tig0016715:393916-393935 | Msa1359660:intron | 20.0% |
| !!! | CAATTTATTTGTTTTGTAGT+GGG | + | tig0016715:393917-393936 | Msa1359660:intron | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | - | tig0016715:394193-394212 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | + | tig0016715:394195-394214 | Msa1359660:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | + | tig0016715:394391-394410 | Msa1359660:intron | 20.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | + | tig0016715:394392-394411 | Msa1359660:intron | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | - | tig0016715:394544-394563 | None:intergenic | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | + | tig0016715:394543-394562 | Msa1359660:intron | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | + | tig0016715:394544-394563 | Msa1359660:intron | 20.0% |
| !! | AAAAATGTTAGATGAAAAGA+AGG | - | tig0016715:395066-395085 | None:intergenic | 20.0% |
| !! | TTACTATTTAATATCTAACC+CGG | + | tig0016715:395368-395387 | Msa1359660:intron | 20.0% |
| !!! | TCTTTTACTGAATTATTGAT+AGG | - | tig0016715:395444-395463 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATGGAATTTGTT+AGG | + | tig0016715:391782-391801 | Msa1359660:five_prime_UTR | 20.0% |
| !!! | AAAATAATTGATGATGTTGA+AGG | + | tig0016715:391955-391974 | Msa1359660:intron | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | - | tig0016715:392889-392908 | None:intergenic | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | - | tig0016715:392913-392932 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+CGG | + | tig0016715:393039-393058 | Msa1359660:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | - | tig0016715:393319-393338 | None:intergenic | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | + | tig0016715:393638-393657 | Msa1359660:intron | 20.0% |
| !!! | TCAATTTATTTGTTTTGTAG+TGG | + | tig0016715:393916-393935 | Msa1359660:intron | 20.0% |
| !!! | CAATTTATTTGTTTTGTAGT+GGG | + | tig0016715:393917-393936 | Msa1359660:intron | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | - | tig0016715:394193-394212 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | + | tig0016715:394195-394214 | Msa1359660:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | + | tig0016715:394391-394410 | Msa1359660:intron | 20.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | + | tig0016715:394392-394411 | Msa1359660:intron | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | - | tig0016715:394544-394563 | None:intergenic | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | + | tig0016715:394543-394562 | Msa1359660:intron | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | + | tig0016715:394544-394563 | Msa1359660:intron | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | + | tig0016715:399012-399031 | Msa1359660:intron | 20.0% |
| !!! | TCTGGTTATAATGATTTTAT+GGG | + | tig0016715:399555-399574 | Msa1359660:intron | 20.0% |
| !! | AATACTGAATAGACAAAAAA+TGG | - | tig0016715:400043-400062 | None:intergenic | 20.0% |
| !! | CTTAGATAAAAATTAGAAAG+GGG | - | tig0016715:400090-400109 | None:intergenic | 20.0% |
| !!! | GAATACTTTTTAAGATCTTT+AGG | + | tig0016715:400142-400161 | Msa1359660:three_prime_UTR | 20.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | + | tig0016715:392203-392222 | Msa1359660:intron | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | + | tig0016715:392745-392764 | Msa1359660:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | + | tig0016715:393326-393345 | Msa1359660:intron | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | + | tig0016715:393647-393666 | Msa1359660:intron | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | + | tig0016715:393727-393746 | Msa1359660:intron | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | + | tig0016715:393797-393816 | Msa1359660:intron | 25.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | - | tig0016715:393858-393877 | None:intergenic | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | - | tig0016715:393859-393878 | None:intergenic | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | + | tig0016715:393858-393877 | Msa1359660:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | + | tig0016715:394130-394149 | Msa1359660:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | - | tig0016715:394194-394213 | None:intergenic | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | + | tig0016715:394194-394213 | Msa1359660:intron | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | + | tig0016715:394196-394215 | Msa1359660:intron | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | - | tig0016715:394250-394269 | None:intergenic | 25.0% |
| ! | TTTAAACTTTACTACAGGAT+TGG | - | tig0016715:394300-394319 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | - | tig0016715:394456-394475 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | + | tig0016715:394471-394490 | Msa1359660:intron | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | - | tig0016715:394524-394543 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | - | tig0016715:394525-394544 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | - | tig0016715:394528-394547 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | + | tig0016715:394545-394564 | Msa1359660:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | + | tig0016715:394593-394612 | Msa1359660:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | - | tig0016715:394940-394959 | None:intergenic | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | - | tig0016715:394941-394960 | None:intergenic | 25.0% |
| !! | TCTAACATTTTTCCTTTTTC+AGG | + | tig0016715:395074-395093 | Msa1359660:intron | 25.0% |
| ! | AGAGAAAAAATCGATTGAAA+GGG | - | tig0016715:395122-395141 | None:intergenic | 25.0% |
| ! | TACTATTTAATATCTAACCC+GGG | + | tig0016715:395369-395388 | Msa1359660:intron | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | + | tig0016715:392203-392222 | Msa1359660:intron | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | + | tig0016715:392745-392764 | Msa1359660:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | + | tig0016715:393326-393345 | Msa1359660:intron | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | + | tig0016715:393647-393666 | Msa1359660:intron | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | + | tig0016715:393727-393746 | Msa1359660:intron | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | + | tig0016715:393797-393816 | Msa1359660:intron | 25.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | - | tig0016715:393858-393877 | None:intergenic | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | - | tig0016715:393859-393878 | None:intergenic | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | + | tig0016715:393858-393877 | Msa1359660:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | + | tig0016715:394130-394149 | Msa1359660:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | - | tig0016715:394194-394213 | None:intergenic | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | + | tig0016715:394194-394213 | Msa1359660:intron | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | + | tig0016715:394196-394215 | Msa1359660:intron | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | - | tig0016715:394250-394269 | None:intergenic | 25.0% |
| ! | TTTAAACTTTACTACAGGAT+TGG | - | tig0016715:394300-394319 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | - | tig0016715:394456-394475 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | + | tig0016715:394471-394490 | Msa1359660:intron | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | - | tig0016715:394524-394543 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | - | tig0016715:394525-394544 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | - | tig0016715:394528-394547 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | + | tig0016715:394545-394564 | Msa1359660:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | + | tig0016715:394593-394612 | Msa1359660:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | - | tig0016715:394940-394959 | None:intergenic | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | - | tig0016715:394941-394960 | None:intergenic | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | + | tig0016715:399007-399026 | Msa1359660:intron | 25.0% |
| !! | TATGGAAGTACAAACAAATT+TGG | - | tig0016715:399240-399259 | None:intergenic | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | + | tig0016715:399505-399524 | Msa1359660:intron | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | + | tig0016715:399506-399525 | Msa1359660:intron | 25.0% |
| !! | CTCTGGTTATAATGATTTTA+TGG | + | tig0016715:399554-399573 | Msa1359660:intron | 25.0% |
| !! | CTGGTTATAATGATTTTATG+GGG | + | tig0016715:399556-399575 | Msa1359660:intron | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | - | tig0016715:399596-399615 | None:intergenic | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | + | tig0016715:399606-399625 | Msa1359660:intron | 25.0% |
| ! | AAATGCTAATAACATCATCA+TGG | - | tig0016715:399747-399766 | None:intergenic | 25.0% |
| !!! | AGCACTATTTTAATAGTGTT+TGG | - | tig0016715:399859-399878 | None:intergenic | 25.0% |
| ! | ATGTGATTGAGTGATAAATA+TGG | + | tig0016715:400064-400083 | Msa1359660:three_prime_UTR | 25.0% |
| !! | GTTTTTACTTATGTACATGA+TGG | + | tig0016715:400177-400196 | Msa1359660:three_prime_UTR | 25.0% |
| AACCTAATAAAGCAAATGAG+CGG | + | tig0016715:391818-391837 | Msa1359660:intron | 30.0% | |
| ! | ATGAGCCTATGGATTTTATA+GGG | - | tig0016715:392090-392109 | None:intergenic | 30.0% |
| ! | AATGAGCCTATGGATTTTAT+AGG | - | tig0016715:392091-392110 | None:intergenic | 30.0% |
| AAAACCATAATTGACAGCAA+GGG | - | tig0016715:392328-392347 | None:intergenic | 30.0% | |
| AAAAACCATAATTGACAGCA+AGG | - | tig0016715:392329-392348 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | + | tig0016715:392474-392493 | Msa1359660:intron | 30.0% | |
| !! | GTTTTGATATCCTGTTACTT+AGG | + | tig0016715:392652-392671 | Msa1359660:intron | 30.0% |
| AATCACAAAACCTAAGTAAC+AGG | - | tig0016715:392665-392684 | None:intergenic | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | + | tig0016715:392707-392726 | Msa1359660:intron | 30.0% | |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | + | tig0016715:392761-392780 | Msa1359660:intron | 30.0% |
| AAGTGAAGTTGAAATTGAGA+AGG | + | tig0016715:392863-392882 | Msa1359660:intron | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | - | tig0016715:393015-393034 | None:intergenic | 30.0% | |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | + | tig0016715:393084-393103 | Msa1359660:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | - | tig0016715:393315-393334 | None:intergenic | 30.0% |
| CACAAGCAAATGTCAATATT+TGG | + | tig0016715:393513-393532 | Msa1359660:intron | 30.0% | |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | + | tig0016715:393731-393750 | Msa1359660:intron | 30.0% |
| CCAAACAAATTAACACCTTT+AGG | - | tig0016715:393860-393879 | None:intergenic | 30.0% | |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | + | tig0016715:393857-393876 | Msa1359660:intron | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | + | tig0016715:394479-394498 | Msa1359660:intron | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | + | tig0016715:394480-394499 | Msa1359660:intron | 30.0% |
| CCCCAATAGTAACAATTATT+TGG | - | tig0016715:394548-394567 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | + | tig0016715:394620-394639 | Msa1359660:intron | 30.0% | |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | + | tig0016715:394677-394696 | Msa1359660:intron | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | + | tig0016715:394678-394697 | Msa1359660:intron | 30.0% |
| TTTACATCAAGACTCAGAAA+AGG | + | tig0016715:394726-394745 | Msa1359660:intron | 30.0% | |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | - | tig0016715:394916-394935 | None:intergenic | 30.0% |
| TTAGATGAAAAGAAGGTTTG+GGG | - | tig0016715:395059-395078 | None:intergenic | 30.0% | |
| GTTAGATGAAAAGAAGGTTT+GGG | - | tig0016715:395060-395079 | None:intergenic | 30.0% | |
| TGTTAGATGAAAAGAAGGTT+TGG | - | tig0016715:395061-395080 | None:intergenic | 30.0% | |
| ! | AAGGGAATAAAATTGGTGTT+TGG | - | tig0016715:395104-395123 | None:intergenic | 30.0% |
| CGATTGAAAGGGAATAAAAT+TGG | - | tig0016715:395111-395130 | None:intergenic | 30.0% | |
| GAGAGAAAAAATCGATTGAA+AGG | - | tig0016715:395123-395142 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTCTCATACGCAT+GGG | + | tig0016715:395131-395150 | Msa1359660:intron | 30.0% |
| CAATAATGAATTAGTCCAAG+TGG | - | tig0016715:395206-395225 | None:intergenic | 30.0% | |
| ATATTGATCACTGATGAAGA+TGG | - | tig0016715:395561-395580 | None:intergenic | 30.0% | |
| CAATATCTTTAATCCTTCTC+TGG | + | tig0016715:395575-395594 | Msa1359660:intron | 30.0% | |
| ! | ACTTAACCTGTATTTTCTCA+CGG | - | tig0016715:395636-395655 | None:intergenic | 30.0% |
| AACCTAATAAAGCAAATGAG+CGG | + | tig0016715:391818-391837 | Msa1359660:intron | 30.0% | |
| ! | ATGAGCCTATGGATTTTATA+GGG | - | tig0016715:392090-392109 | None:intergenic | 30.0% |
| ! | AATGAGCCTATGGATTTTAT+AGG | - | tig0016715:392091-392110 | None:intergenic | 30.0% |
| AAAACCATAATTGACAGCAA+GGG | - | tig0016715:392328-392347 | None:intergenic | 30.0% | |
| AAAAACCATAATTGACAGCA+AGG | - | tig0016715:392329-392348 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | + | tig0016715:392474-392493 | Msa1359660:intron | 30.0% | |
| !! | GTTTTGATATCCTGTTACTT+AGG | + | tig0016715:392652-392671 | Msa1359660:intron | 30.0% |
| AATCACAAAACCTAAGTAAC+AGG | - | tig0016715:392665-392684 | None:intergenic | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | + | tig0016715:392707-392726 | Msa1359660:intron | 30.0% | |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | + | tig0016715:392761-392780 | Msa1359660:intron | 30.0% |
| AAGTGAAGTTGAAATTGAGA+AGG | + | tig0016715:392863-392882 | Msa1359660:intron | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | - | tig0016715:393015-393034 | None:intergenic | 30.0% | |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | + | tig0016715:393084-393103 | Msa1359660:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | - | tig0016715:393315-393334 | None:intergenic | 30.0% |
| CACAAGCAAATGTCAATATT+TGG | + | tig0016715:393513-393532 | Msa1359660:intron | 30.0% | |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | + | tig0016715:393731-393750 | Msa1359660:intron | 30.0% |
| CCAAACAAATTAACACCTTT+AGG | - | tig0016715:393860-393879 | None:intergenic | 30.0% | |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | + | tig0016715:393857-393876 | Msa1359660:intron | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | + | tig0016715:394479-394498 | Msa1359660:intron | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | + | tig0016715:394480-394499 | Msa1359660:intron | 30.0% |
| CCCCAATAGTAACAATTATT+TGG | - | tig0016715:394548-394567 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | + | tig0016715:394620-394639 | Msa1359660:intron | 30.0% | |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | + | tig0016715:394677-394696 | Msa1359660:intron | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | + | tig0016715:394678-394697 | Msa1359660:intron | 30.0% |
| TTTACATCAAGACTCAGAAA+AGG | + | tig0016715:394726-394745 | Msa1359660:intron | 30.0% | |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | - | tig0016715:394916-394935 | None:intergenic | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | - | tig0016715:399081-399100 | None:intergenic | 30.0% |
| CAAAAGAGTTACTGTAGTTT+GGG | - | tig0016715:399110-399129 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | - | tig0016715:399111-399130 | None:intergenic | 30.0% | |
| ! | TATTTTGTCATGCAATGCTT+TGG | + | tig0016715:399164-399183 | Msa1359660:intron | 30.0% |
| AATGCTTTGGTATGACAATT+TGG | + | tig0016715:399177-399196 | Msa1359660:intron | 30.0% | |
| AAGAATCAATGTAAGCAGAT+AGG | - | tig0016715:399410-399429 | None:intergenic | 30.0% | |
| ACACTATTAAAATAGTGCTG+TGG | + | tig0016715:399860-399879 | Msa1359660:three_prime_UTR | 30.0% | |
| ! | AAAATGGTCCTTTTCAAAGT+GGG | - | tig0016715:400027-400046 | None:intergenic | 30.0% |
| ! | AAAAATGGTCCTTTTCAAAG+TGG | - | tig0016715:400028-400047 | None:intergenic | 30.0% |
| CATGATGGTATGAAATTGTT+TGG | + | tig0016715:400192-400211 | Msa1359660:three_prime_UTR | 30.0% | |
| TGCTTCAAAAAAAAGGCAAG+AGG | + | tig0016715:391733-391752 | Msa1359660:five_prime_UTR | 35.0% | |
| CAAAAAAAAGGCAAGAGGAT+AGG | + | tig0016715:391738-391757 | Msa1359660:five_prime_UTR | 35.0% | |
| CAAGAGGATAGGAATGAAAT+AGG | + | tig0016715:391749-391768 | Msa1359660:five_prime_UTR | 35.0% | |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | + | tig0016715:391771-391790 | Msa1359660:five_prime_UTR | 35.0% |
| ACCTAATAAAGCAAATGAGC+GGG | + | tig0016715:391819-391838 | Msa1359660:intron | 35.0% | |
| CAAATGAGCGGGAAAAAATT+AGG | + | tig0016715:391830-391849 | Msa1359660:intron | 35.0% | |
| ACATCCCCTATAAAATCCAT+AGG | + | tig0016715:392082-392101 | Msa1359660:intron | 35.0% | |
| ! | TGAGCCTATGGATTTTATAG+GGG | - | tig0016715:392089-392108 | None:intergenic | 35.0% |
| GTTGCAATTCCAAATTCTTG+GGG | - | tig0016715:392119-392138 | None:intergenic | 35.0% | |
| GGTTGCAATTCCAAATTCTT+GGG | - | tig0016715:392120-392139 | None:intergenic | 35.0% | |
| !! | TGAGATTCTGAAGTTGACAT+TGG | - | tig0016715:392168-392187 | None:intergenic | 35.0% |
| !! | TTTGTTTCTGATGACAGTGT+CGG | - | tig0016715:392195-392214 | None:intergenic | 35.0% |
| AAACCATAATTGACAGCAAG+GGG | - | tig0016715:392327-392346 | None:intergenic | 35.0% | |
| ! | TATAGGTTGAAATCCAAGTG+AGG | + | tig0016715:392778-392797 | Msa1359660:intron | 35.0% |
| GAAACTGTATTGTGTGAGTA+AGG | + | tig0016715:392800-392819 | Msa1359660:intron | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | - | tig0016715:393074-393093 | None:intergenic | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | - | tig0016715:393075-393094 | None:intergenic | 35.0% | |
| !! | TGGAAAATTCCTTGATTTGC+TGG | - | tig0016715:393184-393203 | None:intergenic | 35.0% |
| CAGAAGATTCCTTTACTCAT+AGG | + | tig0016715:393577-393596 | Msa1359660:intron | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | + | tig0016715:393614-393633 | Msa1359660:intron | 35.0% | |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | + | tig0016715:393690-393709 | Msa1359660:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | + | tig0016715:393737-393756 | Msa1359660:intron | 35.0% |
| GAAGATACTGCACATTCATA+GGG | - | tig0016715:394021-394040 | None:intergenic | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | + | tig0016715:394032-394051 | Msa1359660:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | + | tig0016715:394140-394159 | Msa1359660:intron | 35.0% | |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | + | tig0016715:394199-394218 | Msa1359660:intron | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | + | tig0016715:394481-394500 | Msa1359660:intron | 35.0% |
| TAGGTTCCTAACTATTGTTG+AGG | + | tig0016715:394639-394658 | Msa1359660:intron | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | - | tig0016715:394648-394667 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | + | tig0016715:394648-394667 | Msa1359660:intron | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | + | tig0016715:394649-394668 | Msa1359660:intron | 35.0% | |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | + | tig0016715:394685-394704 | Msa1359660:intron | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | + | tig0016715:394829-394848 | Msa1359660:intron | 35.0% |
| TCAGTATTCAAGTCACCAAA+AGG | - | tig0016715:394875-394894 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | + | tig0016715:394882-394901 | Msa1359660:intron | 35.0% | |
| !!! | GATTTTTTCTCTCATACGCA+TGG | + | tig0016715:395130-395149 | Msa1359660:intron | 35.0% |
| TACGACATTAGACGTTACAT+TGG | + | tig0016715:395527-395546 | Msa1359660:intron | 35.0% | |
| TGCTTCAAAAAAAAGGCAAG+AGG | + | tig0016715:391733-391752 | Msa1359660:five_prime_UTR | 35.0% | |
| CAAAAAAAAGGCAAGAGGAT+AGG | + | tig0016715:391738-391757 | Msa1359660:five_prime_UTR | 35.0% | |
| CAAGAGGATAGGAATGAAAT+TGG | + | tig0016715:391749-391768 | Msa1359660:five_prime_UTR | 35.0% | |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | + | tig0016715:391771-391790 | Msa1359660:five_prime_UTR | 35.0% |
| ACCTAATAAAGCAAATGAGC+GGG | + | tig0016715:391819-391838 | Msa1359660:intron | 35.0% | |
| CAAATGAGCGGGAAAAAATT+AGG | + | tig0016715:391830-391849 | Msa1359660:intron | 35.0% | |
| ACATCCCCTATAAAATCCAT+AGG | + | tig0016715:392082-392101 | Msa1359660:intron | 35.0% | |
| ! | TGAGCCTATGGATTTTATAG+GGG | - | tig0016715:392089-392108 | None:intergenic | 35.0% |
| GTTGCAATTCCAAATTCTTG+GGG | - | tig0016715:392119-392138 | None:intergenic | 35.0% | |
| GGTTGCAATTCCAAATTCTT+GGG | - | tig0016715:392120-392139 | None:intergenic | 35.0% | |
| !! | TGAGATTCTGAAGTTGACAT+TGG | - | tig0016715:392168-392187 | None:intergenic | 35.0% |
| !! | TTTGTTTCTGATGACAGTGT+CGG | - | tig0016715:392195-392214 | None:intergenic | 35.0% |
| AAACCATAATTGACAGCAAG+GGG | - | tig0016715:392327-392346 | None:intergenic | 35.0% | |
| ! | TATAGGTTGAAATCCAAGTG+AGG | + | tig0016715:392778-392797 | Msa1359660:intron | 35.0% |
| GAAACTGTATTGTGTGAGTA+AGG | + | tig0016715:392800-392819 | Msa1359660:intron | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | - | tig0016715:393074-393093 | None:intergenic | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | - | tig0016715:393075-393094 | None:intergenic | 35.0% | |
| !! | TGGAAAATTCCTTGATTTGC+TGG | - | tig0016715:393184-393203 | None:intergenic | 35.0% |
| CAGAAGATTCCTTTACTCAT+AGG | + | tig0016715:393577-393596 | Msa1359660:intron | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | + | tig0016715:393614-393633 | Msa1359660:intron | 35.0% | |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | + | tig0016715:393690-393709 | Msa1359660:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | + | tig0016715:393737-393756 | Msa1359660:intron | 35.0% |
| GAAGATACTGCACATTCATA+GGG | - | tig0016715:394021-394040 | None:intergenic | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | + | tig0016715:394032-394051 | Msa1359660:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | + | tig0016715:394140-394159 | Msa1359660:intron | 35.0% | |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | + | tig0016715:394199-394218 | Msa1359660:intron | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | + | tig0016715:394481-394500 | Msa1359660:intron | 35.0% |
| TAGGTTCCTAACTATTGTTG+AGG | + | tig0016715:394639-394658 | Msa1359660:intron | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | - | tig0016715:394648-394667 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | + | tig0016715:394648-394667 | Msa1359660:intron | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | + | tig0016715:394649-394668 | Msa1359660:intron | 35.0% | |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | + | tig0016715:394685-394704 | Msa1359660:intron | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | + | tig0016715:394829-394848 | Msa1359660:intron | 35.0% |
| TCAGTATTCAAGTCACCAAA+AGG | - | tig0016715:394875-394894 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | + | tig0016715:394882-394901 | Msa1359660:intron | 35.0% | |
| ! | TAAAATGGTCTTACAGCCAA+CGG | - | tig0016715:399066-399085 | None:intergenic | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | + | tig0016715:399123-399142 | Msa1359660:CDS | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | + | tig0016715:399201-399220 | Msa1359660:intron | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | + | tig0016715:399254-399273 | Msa1359660:intron | 35.0% |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | + | tig0016715:399255-399274 | Msa1359660:intron | 35.0% |
| TTAGGTGAGGAGATAATATC+AGG | + | tig0016715:399315-399334 | Msa1359660:intron | 35.0% | |
| ! | TATCCACATGCCTGAATTTT+TGG | + | tig0016715:399347-399366 | Msa1359660:CDS | 35.0% |
| !! | CTGCTTACATTGATTCTTTC+AGG | + | tig0016715:399412-399431 | Msa1359660:CDS | 35.0% |
| !! | CTGCTTACATTGATTCTTTC+AGG | + | tig0016715:399412-399431 | Msa1359660:CDS | 35.0% |
| ACAAAGACATTGAACACGAT+AGG | - | tig0016715:399500-399519 | None:intergenic | 35.0% | |
| CTTTGTTAATACGGGTGTTT+AGG | + | tig0016715:399514-399533 | Msa1359660:intron | 35.0% | |
| ! | AAGTAAGTCCAAGGCATTAT+TGG | - | tig0016715:399834-399853 | None:intergenic | 35.0% |
| TGTTTGGAAAAGTAAGTCCA+AGG | - | tig0016715:399843-399862 | None:intergenic | 35.0% | |
| ! | TTCTATTTTCACCGTCAACT+TGG | + | tig0016715:399895-399914 | Msa1359660:three_prime_UTR | 35.0% |
| ! | TTAAGATCTTTAGGAGCTGA+TGG | + | tig0016715:400151-400170 | Msa1359660:three_prime_UTR | 35.0% |
| ! | TCCCGCTCATTTGCTTTATT+AGG | - | tig0016715:391823-391842 | None:intergenic | 40.0% |
| CATTGATGTCCCCAAGAATT+TGG | + | tig0016715:392107-392126 | Msa1359660:intron | 40.0% | |
| GGGTTGCAATTCCAAATTCT+TGG | - | tig0016715:392121-392140 | None:intergenic | 40.0% | |
| AAGTTGACATTGGAGGTTTC+CGG | - | tig0016715:392158-392177 | None:intergenic | 40.0% | |
| !! | GATTCTGAAGTTGACATTGG+AGG | - | tig0016715:392165-392184 | None:intergenic | 40.0% |
| AACCATAATTGACAGCAAGG+GGG | - | tig0016715:392326-392345 | None:intergenic | 40.0% | |
| ATCATTGAGAGCCTCAACTT+CGG | - | tig0016715:392382-392401 | None:intergenic | 40.0% | |
| CAACATCGACAATAGACTCA+CGG | - | tig0016715:392578-392597 | None:intergenic | 40.0% | |
| GAGTCTATTGTCGATGTTGA+AGG | + | tig0016715:392579-392598 | Msa1359660:intron | 40.0% | |
| TATTGTCGATGTTGAAGGTG+TGG | + | tig0016715:392584-392603 | Msa1359660:intron | 40.0% | |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | - | tig0016715:392627-392646 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | + | tig0016715:392626-392645 | Msa1359660:intron | 40.0% |
| ATCAAAACCAACCTGTTGTG+AGG | - | tig0016715:392640-392659 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | - | tig0016715:392794-392813 | None:intergenic | 40.0% | |
| ATTAAACGGCAGAGTAGGAA+TGG | - | tig0016715:392826-392845 | None:intergenic | 40.0% | |
| TCGATATTAAACGGCAGAGT+AGG | - | tig0016715:392831-392850 | None:intergenic | 40.0% | |
| ! | TACTCTGCCGTTTAATATCG+AGG | + | tig0016715:392830-392849 | Msa1359660:intron | 40.0% |
| GCAGCATCCTCGATATTAAA+CGG | - | tig0016715:392840-392859 | None:intergenic | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | + | tig0016715:392872-392891 | Msa1359660:intron | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | + | tig0016715:392947-392966 | Msa1359660:intron | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | + | tig0016715:393069-393088 | Msa1359660:intron | 40.0% | |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | + | tig0016715:393090-393109 | Msa1359660:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | + | tig0016715:393094-393113 | Msa1359660:intron | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | tig0016715:393120-393139 | Msa1359660:intron | 40.0% |
| TTACAGTTCCAACTTGAGAC+TGG | - | tig0016715:393210-393229 | None:intergenic | 40.0% | |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | + | tig0016715:393281-393300 | Msa1359660:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | + | tig0016715:393336-393355 | Msa1359660:intron | 40.0% |
| CTAGATCCAGCAATCAACTT+AGG | - | tig0016715:393420-393439 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | + | tig0016715:393423-393442 | Msa1359660:intron | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | + | tig0016715:393457-393476 | Msa1359660:intron | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | - | tig0016715:393507-393526 | None:intergenic | 40.0% | |
| CAGCACCAATCTCAAAAACA+CGG | - | tig0016715:393548-393567 | None:intergenic | 40.0% | |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | + | tig0016715:393689-393708 | Msa1359660:intron | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | - | tig0016715:393849-393868 | None:intergenic | 40.0% |
| GGAAGATACTGCACATTCAT+AGG | - | tig0016715:394022-394041 | None:intergenic | 40.0% | |
| ! | TATGTAAGCCGCAGAGTATT+TGG | - | tig0016715:394043-394062 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | + | tig0016715:394066-394085 | Msa1359660:intron | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | + | tig0016715:394143-394162 | Msa1359660:intron | 40.0% |
| GACAGGGATAAAAGACGTAA+AGG | - | tig0016715:394177-394196 | None:intergenic | 40.0% | |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | + | tig0016715:394219-394238 | Msa1359660:intron | 40.0% |
| GAAAATGTACTTGGGTAGAC+AGG | + | tig0016715:394400-394419 | Msa1359660:intron | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | + | tig0016715:394650-394669 | Msa1359660:intron | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | - | tig0016715:394669-394688 | None:intergenic | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | - | tig0016715:394683-394702 | None:intergenic | 40.0% | |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | tig0016715:394836-394855 | Msa1359660:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | + | tig0016715:394857-394876 | Msa1359660:intron | 40.0% |
| ACTGAAGCAGAAAGGAAACT+AGG | + | tig0016715:394890-394909 | Msa1359660:intron | 40.0% | |
| GTGTTTGGCAAACCTGAAAA+AGG | - | tig0016715:395089-395108 | None:intergenic | 40.0% | |
| ACCCATGACCACATGTTTAA+AGG | + | tig0016715:395165-395184 | Msa1359660:intron | 40.0% | |
| GCCTTTAAACATGTGGTCAT+GGG | - | tig0016715:395169-395188 | None:intergenic | 40.0% | |
| TGCCTTTAAACATGTGGTCA+TGG | - | tig0016715:395170-395189 | None:intergenic | 40.0% | |
| TTTGGGTGCCTTTAAACATG+TGG | - | tig0016715:395176-395195 | None:intergenic | 40.0% | |
| ! | GTCCAAGTGGTAAGAGTTTT+GGG | - | tig0016715:395193-395212 | None:intergenic | 40.0% |
| ! | AGTCCAAGTGGTAAGAGTTT+TGG | - | tig0016715:395194-395213 | None:intergenic | 40.0% |
| TCAAGAGTTACATCCAGAGA+AGG | - | tig0016715:395591-395610 | None:intergenic | 40.0% | |
| AACTGTCCGTGAGAAAATAC+AGG | + | tig0016715:395627-395646 | Msa1359660:intron | 40.0% | |
| ! | TCCCGCTCATTTGCTTTATT+AGG | - | tig0016715:391823-391842 | None:intergenic | 40.0% |
| CATTGATGTCCCCAAGAATT+TGG | + | tig0016715:392107-392126 | Msa1359660:intron | 40.0% | |
| GGGTTGCAATTCCAAATTCT+TGG | - | tig0016715:392121-392140 | None:intergenic | 40.0% | |
| AAGTTGACATTGGAGGTTTC+CGG | - | tig0016715:392158-392177 | None:intergenic | 40.0% | |
| !! | GATTCTGAAGTTGACATTGG+AGG | - | tig0016715:392165-392184 | None:intergenic | 40.0% |
| AACCATAATTGACAGCAAGG+GGG | - | tig0016715:392326-392345 | None:intergenic | 40.0% | |
| ATCATTGAGAGCCTCAACTT+CGG | - | tig0016715:392382-392401 | None:intergenic | 40.0% | |
| CAACATCGACAATAGACTCA+CGG | - | tig0016715:392578-392597 | None:intergenic | 40.0% | |
| GAGTCTATTGTCGATGTTGA+AGG | + | tig0016715:392579-392598 | Msa1359660:intron | 40.0% | |
| TATTGTCGATGTTGAAGGTG+TGG | + | tig0016715:392584-392603 | Msa1359660:intron | 40.0% | |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | - | tig0016715:392627-392646 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | + | tig0016715:392626-392645 | Msa1359660:intron | 40.0% |
| ATCAAAACCAACCTGTTGTG+AGG | - | tig0016715:392640-392659 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | - | tig0016715:392794-392813 | None:intergenic | 40.0% | |
| ATTAAACGGCAGAGTAGGAA+TGG | - | tig0016715:392826-392845 | None:intergenic | 40.0% | |
| TCGATATTAAACGGCAGAGT+AGG | - | tig0016715:392831-392850 | None:intergenic | 40.0% | |
| ! | TACTCTGCCGTTTAATATCG+AGG | + | tig0016715:392830-392849 | Msa1359660:intron | 40.0% |
| GCAGCATCCTCGATATTAAA+CGG | - | tig0016715:392840-392859 | None:intergenic | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | + | tig0016715:392872-392891 | Msa1359660:intron | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | + | tig0016715:392947-392966 | Msa1359660:intron | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | + | tig0016715:393069-393088 | Msa1359660:intron | 40.0% | |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | + | tig0016715:393090-393109 | Msa1359660:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | + | tig0016715:393094-393113 | Msa1359660:intron | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | tig0016715:393120-393139 | Msa1359660:intron | 40.0% |
| TTACAGTTCCAACTTGAGAC+TGG | - | tig0016715:393210-393229 | None:intergenic | 40.0% | |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | + | tig0016715:393281-393300 | Msa1359660:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | + | tig0016715:393336-393355 | Msa1359660:intron | 40.0% |
| CTAGATCCAGCAATCAACTT+AGG | - | tig0016715:393420-393439 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | + | tig0016715:393423-393442 | Msa1359660:intron | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | + | tig0016715:393457-393476 | Msa1359660:intron | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | - | tig0016715:393507-393526 | None:intergenic | 40.0% | |
| CAGCACCAATCTCAAAAACA+CGG | - | tig0016715:393548-393567 | None:intergenic | 40.0% | |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | + | tig0016715:393689-393708 | Msa1359660:intron | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | - | tig0016715:393849-393868 | None:intergenic | 40.0% |
| GGAAGATACTGCACATTCAT+AGG | - | tig0016715:394022-394041 | None:intergenic | 40.0% | |
| ! | TATGTAAGCCGCAGAGTATT+TGG | - | tig0016715:394043-394062 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | + | tig0016715:394066-394085 | Msa1359660:intron | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | + | tig0016715:394143-394162 | Msa1359660:intron | 40.0% |
| GACAGGGATAAAAGACGTAA+AGG | - | tig0016715:394177-394196 | None:intergenic | 40.0% | |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | + | tig0016715:394219-394238 | Msa1359660:intron | 40.0% |
| GAAAATGTACTTGGGTAGAC+AGG | + | tig0016715:394400-394419 | Msa1359660:intron | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | + | tig0016715:394650-394669 | Msa1359660:intron | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | - | tig0016715:394669-394688 | None:intergenic | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | - | tig0016715:394683-394702 | None:intergenic | 40.0% | |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | tig0016715:394836-394855 | Msa1359660:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | + | tig0016715:394857-394876 | Msa1359660:intron | 40.0% |
| ACTGAAGCAGAAAGGAAACT+AGG | + | tig0016715:394890-394909 | Msa1359660:intron | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | + | tig0016715:399037-399056 | Msa1359660:CDS | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | - | tig0016715:399065-399084 | None:intergenic | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | - | tig0016715:399096-399115 | None:intergenic | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | - | tig0016715:399258-399277 | None:intergenic | 40.0% |
| ! | CTATGCAATCCTTGTTGCTT+AGG | + | tig0016715:399297-399316 | Msa1359660:intron | 40.0% |
| CTTCCAAAAATTCAGGCATG+TGG | - | tig0016715:399353-399372 | None:intergenic | 40.0% | |
| GCACGTTCTTCCAAAAATTC+AGG | - | tig0016715:399360-399379 | None:intergenic | 40.0% | |
| ATGCAGTTCTATATGAAGCG+GGG | - | tig0016715:399984-400003 | None:intergenic | 40.0% | |
| CATGCAGTTCTATATGAAGC+GGG | - | tig0016715:399985-400004 | None:intergenic | 40.0% | |
| GCATGCAGTTCTATATGAAG+CGG | - | tig0016715:399986-400005 | None:intergenic | 40.0% | |
| AACCCTAGCAATACCTTCTC+CGG | + | tig0016715:392136-392155 | Msa1359660:intron | 45.0% | |
| !! | TTCCGGAGAAGGTATTGCTA+GGG | - | tig0016715:392141-392160 | None:intergenic | 45.0% |
| !! | TTTCCGGAGAAGGTATTGCT+AGG | - | tig0016715:392142-392161 | None:intergenic | 45.0% |
| AAGCAAAAAGGCCTCCAAGA+AGG | + | tig0016715:392215-392234 | Msa1359660:intron | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | + | tig0016715:392386-392405 | Msa1359660:intron | 45.0% | |
| TGATTCACTGGAGAACAAGC+AGG | + | tig0016715:392398-392417 | Msa1359660:intron | 45.0% | |
| ! | AACAAGCAGGTTCTAATCCG+TGG | + | tig0016715:392411-392430 | Msa1359660:intron | 45.0% |
| ! | ACAAGCAGGTTCTAATCCGT+GGG | + | tig0016715:392412-392431 | Msa1359660:intron | 45.0% |
| CACAAGCTATTCGACCAGTT+GGG | + | tig0016715:392439-392458 | Msa1359660:intron | 45.0% | |
| AATGCCATCTTCTTCCCAAC+TGG | - | tig0016715:392456-392475 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | - | tig0016715:392531-392550 | None:intergenic | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | + | tig0016715:392530-392549 | Msa1359660:intron | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | - | tig0016715:392613-392632 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | + | tig0016715:392612-392631 | Msa1359660:intron | 45.0% | |
| ! | TGAGGCACCTTTAATAGGAG+CGG | - | tig0016715:392622-392641 | None:intergenic | 45.0% |
| CATGTAAGGGAGACAAGTTC+CGG | - | tig0016715:393061-393080 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | + | tig0016715:393199-393218 | Msa1359660:intron | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | - | tig0016715:393204-393223 | None:intergenic | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | - | tig0016715:393413-393432 | None:intergenic | 45.0% | |
| !! | CACACTCCTAAGTTGATTGC+TGG | + | tig0016715:393411-393430 | Msa1359660:intron | 45.0% |
| GTTGATTGCTGGATCTAGTG+AGG | + | tig0016715:393422-393441 | Msa1359660:intron | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | + | tig0016715:393456-393475 | Msa1359660:intron | 45.0% | |
| !!! | CTTCGCCGTGTTTTTGAGAT+TGG | + | tig0016715:393540-393559 | Msa1359660:intron | 45.0% |
| GCACAGATGCCTATGAGTAA+AGG | - | tig0016715:393589-393608 | None:intergenic | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | + | tig0016715:393812-393831 | Msa1359660:intron | 45.0% | |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | - | tig0016715:393848-393867 | None:intergenic | 45.0% |
| CTGCGGCTTACATATGAAGA+AGG | + | tig0016715:394049-394068 | Msa1359660:intron | 45.0% | |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | + | tig0016715:394218-394237 | Msa1359660:intron | 45.0% |
| TCATTACTCGCTGCAAGACA+AGG | - | tig0016715:394818-394837 | None:intergenic | 45.0% | |
| CACCCAAAACTCTTACCACT+TGG | + | tig0016715:395188-395207 | Msa1359660:intron | 45.0% | |
| AACCCTAGCAATACCTTCTC+CGG | + | tig0016715:392136-392155 | Msa1359660:intron | 45.0% | |
| !! | TTCCGGAGAAGGTATTGCTA+GGG | - | tig0016715:392141-392160 | None:intergenic | 45.0% |
| !! | TTTCCGGAGAAGGTATTGCT+AGG | - | tig0016715:392142-392161 | None:intergenic | 45.0% |
| AAGCAAAAAGGCCTCCAAGA+AGG | + | tig0016715:392215-392234 | Msa1359660:intron | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | + | tig0016715:392386-392405 | Msa1359660:intron | 45.0% | |
| TGATTCACTGGAGAACAAGC+AGG | + | tig0016715:392398-392417 | Msa1359660:intron | 45.0% | |
| ! | AACAAGCAGGTTCTAATCCG+TGG | + | tig0016715:392411-392430 | Msa1359660:intron | 45.0% |
| ! | ACAAGCAGGTTCTAATCCGT+GGG | + | tig0016715:392412-392431 | Msa1359660:intron | 45.0% |
| CACAAGCTATTCGACCAGTT+GGG | + | tig0016715:392439-392458 | Msa1359660:intron | 45.0% | |
| AATGCCATCTTCTTCCCAAC+TGG | - | tig0016715:392456-392475 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | - | tig0016715:392531-392550 | None:intergenic | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | + | tig0016715:392530-392549 | Msa1359660:intron | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | - | tig0016715:392613-392632 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | + | tig0016715:392612-392631 | Msa1359660:intron | 45.0% | |
| ! | TGAGGCACCTTTAATAGGAG+CGG | - | tig0016715:392622-392641 | None:intergenic | 45.0% |
| CATGTAAGGGAGACAAGTTC+CGG | - | tig0016715:393061-393080 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | + | tig0016715:393199-393218 | Msa1359660:intron | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | - | tig0016715:393204-393223 | None:intergenic | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | - | tig0016715:393413-393432 | None:intergenic | 45.0% | |
| !! | CACACTCCTAAGTTGATTGC+TGG | + | tig0016715:393411-393430 | Msa1359660:intron | 45.0% |
| GTTGATTGCTGGATCTAGTG+AGG | + | tig0016715:393422-393441 | Msa1359660:intron | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | + | tig0016715:393456-393475 | Msa1359660:intron | 45.0% | |
| !!! | CTTCGCCGTGTTTTTGAGAT+TGG | + | tig0016715:393540-393559 | Msa1359660:intron | 45.0% |
| GCACAGATGCCTATGAGTAA+AGG | - | tig0016715:393589-393608 | None:intergenic | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | + | tig0016715:393812-393831 | Msa1359660:intron | 45.0% | |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | - | tig0016715:393848-393867 | None:intergenic | 45.0% |
| CTGCGGCTTACATATGAAGA+AGG | + | tig0016715:394049-394068 | Msa1359660:intron | 45.0% | |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | + | tig0016715:394218-394237 | Msa1359660:intron | 45.0% |
| TCATTACTCGCTGCAAGACA+AGG | - | tig0016715:394818-394837 | None:intergenic | 45.0% | |
| ! | CAATCCTTGTTGCTTAGGTG+AGG | + | tig0016715:399302-399321 | Msa1359660:intron | 45.0% |
| ATCTCCTCACCTAAGCAACA+AGG | - | tig0016715:399309-399328 | None:intergenic | 45.0% | |
| ATAACCAGAGCTCAGCAAGA+GGG | - | tig0016715:399544-399563 | None:intergenic | 45.0% | |
| TATAACCAGAGCTCAGCAAG+AGG | - | tig0016715:399545-399564 | None:intergenic | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | + | tig0016715:399621-399640 | Msa1359660:intron | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | + | tig0016715:399666-399685 | Msa1359660:CDS | 45.0% | |
| ATCATGGTGCAATCCTGAGT+GGG | - | tig0016715:399731-399750 | None:intergenic | 45.0% | |
| TCAGGCTTCAGTTGAATGTG+AGG | - | tig0016715:399796-399815 | None:intergenic | 45.0% | |
| CACATTCAACTGAAGCCTGA+AGG | + | tig0016715:399796-399815 | Msa1359660:three_prime_UTR | 45.0% | |
| ! | TAACACCAGCTCCAAGTTGA+CGG | - | tig0016715:399909-399928 | None:intergenic | 45.0% |
| ! | TCACCACACCCACTTTGAAA+AGG | + | tig0016715:400016-400035 | Msa1359660:three_prime_UTR | 45.0% |
| !! | TTATATTATAAAAGAAAATT+CGG | + | tig0016715:395414-395433 | Msa1359660:intron | 5.0% |
| TGGGGACATCAATGAGCCTA+TGG | - | tig0016715:392101-392120 | None:intergenic | 50.0% | |
| ACATTGGAGGTTTCCGGAGA+AGG | - | tig0016715:392152-392171 | None:intergenic | 50.0% | |
| CTTTGCGAGTTCCTTCTTGG+AGG | - | tig0016715:392229-392248 | None:intergenic | 50.0% | |
| CAGCTTTGCGAGTTCCTTCT+TGG | - | tig0016715:392232-392251 | None:intergenic | 50.0% | |
| CAAGAAGGAACTCGCAAAGC+TGG | + | tig0016715:392230-392249 | Msa1359660:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | - | tig0016715:392292-392311 | None:intergenic | 50.0% | |
| ! | GACCCCCTTGCTGTCAATTA+TGG | + | tig0016715:392321-392340 | Msa1359660:intron | 50.0% |
| GCACAAGCTATTCGACCAGT+TGG | + | tig0016715:392438-392457 | Msa1359660:intron | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | + | tig0016715:392449-392468 | Msa1359660:intron | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | + | tig0016715:392494-392513 | Msa1359660:intron | 50.0% | |
| ! | TGCCTGAACCAAGCACTGTA+CGG | - | tig0016715:392505-392524 | None:intergenic | 50.0% |
| GCGGCAAATTTCACCATCTG+CGG | - | tig0016715:392546-392565 | None:intergenic | 50.0% | |
| AATAGACTCACGGCTGAGAG+CGG | - | tig0016715:392568-392587 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCTCACAACAGGT+TGG | + | tig0016715:392630-392649 | Msa1359660:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | - | tig0016715:393174-393193 | None:intergenic | 50.0% |
| CTGCGAACACCAGCAAATCA+AGG | + | tig0016715:393172-393191 | Msa1359660:intron | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | + | tig0016715:393342-393361 | Msa1359660:intron | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | + | tig0016715:393343-393362 | Msa1359660:intron | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | + | tig0016715:393426-393445 | Msa1359660:intron | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | + | tig0016715:393597-393616 | Msa1359660:intron | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | + | tig0016715:393842-393861 | Msa1359660:intron | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | + | tig0016715:394214-394233 | Msa1359660:intron | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | + | tig0016715:394898-394917 | Msa1359660:intron | 50.0% | |
| ! | GTGGTCATGGGTTTGTTTCG+TGG | - | tig0016715:395157-395176 | None:intergenic | 50.0% |
| TGGGGACATCAATGAGCCTA+TGG | - | tig0016715:392101-392120 | None:intergenic | 50.0% | |
| ACATTGGAGGTTTCCGGAGA+AGG | - | tig0016715:392152-392171 | None:intergenic | 50.0% | |
| CTTTGCGAGTTCCTTCTTGG+AGG | - | tig0016715:392229-392248 | None:intergenic | 50.0% | |
| CAGCTTTGCGAGTTCCTTCT+TGG | - | tig0016715:392232-392251 | None:intergenic | 50.0% | |
| CAAGAAGGAACTCGCAAAGC+TGG | + | tig0016715:392230-392249 | Msa1359660:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | - | tig0016715:392292-392311 | None:intergenic | 50.0% | |
| ! | GACCCCCTTGCTGTCAATTA+TGG | + | tig0016715:392321-392340 | Msa1359660:intron | 50.0% |
| GCACAAGCTATTCGACCAGT+TGG | + | tig0016715:392438-392457 | Msa1359660:intron | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | + | tig0016715:392449-392468 | Msa1359660:intron | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | + | tig0016715:392494-392513 | Msa1359660:intron | 50.0% | |
| ! | TGCCTGAACCAAGCACTGTA+CGG | - | tig0016715:392505-392524 | None:intergenic | 50.0% |
| GCGGCAAATTTCACCATCTG+CGG | - | tig0016715:392546-392565 | None:intergenic | 50.0% | |
| AATAGACTCACGGCTGAGAG+CGG | - | tig0016715:392568-392587 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCTCACAACAGGT+TGG | + | tig0016715:392630-392649 | Msa1359660:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | - | tig0016715:393174-393193 | None:intergenic | 50.0% |
| CTGCGAACACCAGCAAATCA+AGG | + | tig0016715:393172-393191 | Msa1359660:intron | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | + | tig0016715:393342-393361 | Msa1359660:intron | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | + | tig0016715:393343-393362 | Msa1359660:intron | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | + | tig0016715:393426-393445 | Msa1359660:intron | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | + | tig0016715:393597-393616 | Msa1359660:intron | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | + | tig0016715:393842-393861 | Msa1359660:intron | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | + | tig0016715:394214-394233 | Msa1359660:intron | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | + | tig0016715:394898-394917 | Msa1359660:intron | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | + | tig0016715:399369-399388 | Msa1359660:CDS | 50.0% | |
| TAACCAGAGCTCAGCAAGAG+GGG | - | tig0016715:399543-399562 | None:intergenic | 50.0% | |
| ! | TTTTTCCACGTGACCCACTC+AGG | + | tig0016715:399715-399734 | Msa1359660:CDS | 50.0% |
| CATCATGGTGCAATCCTGAG+TGG | - | tig0016715:399732-399751 | None:intergenic | 50.0% | |
| GCTTGACGCCAATAATGCCT+TGG | + | tig0016715:399823-399842 | Msa1359660:three_prime_UTR | 50.0% | |
| TTTCACCGTCAACTTGGAGC+TGG | + | tig0016715:399901-399920 | Msa1359660:three_prime_UTR | 50.0% | |
| ! | GGTCCTTTTCAAAGTGGGTG+TGG | - | tig0016715:400022-400041 | None:intergenic | 50.0% |
| AGTCGATGTAGCAGAGGTGG+CGG | - | tig0016715:392286-392305 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | - | tig0016715:392289-392308 | None:intergenic | 55.0% | |
| TCGTCAGGGAGCTCAATGAG+CGG | - | tig0016715:392354-392373 | None:intergenic | 55.0% | |
| TCATTGAGCTCCCTGACGAC+TGG | + | tig0016715:392355-392374 | Msa1359660:intron | 55.0% | |
| CAACTTCGGTCCAGTCGTCA+GGG | - | tig0016715:392368-392387 | None:intergenic | 55.0% | |
| TCAACTTCGGTCCAGTCGTC+AGG | - | tig0016715:392369-392388 | None:intergenic | 55.0% | |
| TGACGACTGGACCGAAGTTG+AGG | + | tig0016715:392368-392387 | Msa1359660:intron | 55.0% | |
| ! | AGCAGGTTCTAATCCGTGGG+AGG | + | tig0016715:392415-392434 | Msa1359660:intron | 55.0% |
| ! | GCAGGTTCTAATCCGTGGGA+GGG | + | tig0016715:392416-392435 | Msa1359660:intron | 55.0% |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | - | tig0016715:392431-392450 | None:intergenic | 55.0% |
| CACCGTACAGTGCTTGGTTC+AGG | + | tig0016715:392500-392519 | Msa1359660:intron | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | - | tig0016715:392618-392637 | None:intergenic | 55.0% | |
| ! | GGTGTGATACGGTGTTGGGT+AGG | + | tig0016715:393347-393366 | Msa1359660:intron | 55.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | + | tig0016715:393442-393461 | Msa1359660:intron | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | + | tig0016715:393446-393465 | Msa1359660:intron | 55.0% | |
| CAAAGGGAAACCTGCATGCC+TGG | + | tig0016715:393473-393492 | Msa1359660:intron | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | tig0016715:393494-393513 | None:intergenic | 55.0% | |
| ATATCTAACCCGGGCAACGC+TGG | + | tig0016715:395378-395397 | Msa1359660:intron | 55.0% | |
| TATCTAACCCGGGCAACGCT+GGG | + | tig0016715:395379-395398 | Msa1359660:intron | 55.0% | |
| TTTAGAGACCCAGCGTTGCC+CGG | - | tig0016715:395390-395409 | None:intergenic | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | - | tig0016715:392286-392305 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | - | tig0016715:392289-392308 | None:intergenic | 55.0% | |
| TCGTCAGGGAGCTCAATGAG+CGG | - | tig0016715:392354-392373 | None:intergenic | 55.0% | |
| TCATTGAGCTCCCTGACGAC+TGG | + | tig0016715:392355-392374 | Msa1359660:intron | 55.0% | |
| CAACTTCGGTCCAGTCGTCA+GGG | - | tig0016715:392368-392387 | None:intergenic | 55.0% | |
| TCAACTTCGGTCCAGTCGTC+AGG | - | tig0016715:392369-392388 | None:intergenic | 55.0% | |
| TGACGACTGGACCGAAGTTG+AGG | + | tig0016715:392368-392387 | Msa1359660:intron | 55.0% | |
| ! | AGCAGGTTCTAATCCGTGGG+AGG | + | tig0016715:392415-392434 | Msa1359660:intron | 55.0% |
| ! | GCAGGTTCTAATCCGTGGGA+GGG | + | tig0016715:392416-392435 | Msa1359660:intron | 55.0% |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | - | tig0016715:392431-392450 | None:intergenic | 55.0% |
| CACCGTACAGTGCTTGGTTC+AGG | + | tig0016715:392500-392519 | Msa1359660:intron | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | - | tig0016715:392618-392637 | None:intergenic | 55.0% | |
| ! | GGTGTGATACGGTGTTGGGT+AGG | + | tig0016715:393347-393366 | Msa1359660:intron | 55.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | + | tig0016715:393442-393461 | Msa1359660:intron | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | + | tig0016715:393446-393465 | Msa1359660:intron | 55.0% | |
| CAAAGGGAAACCTGCATGCC+TGG | + | tig0016715:393473-393492 | Msa1359660:intron | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | tig0016715:393494-393513 | None:intergenic | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | + | tig0016715:399047-399066 | Msa1359660:CDS | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | - | tig0016715:399059-399078 | None:intergenic | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | + | tig0016715:399377-399396 | Msa1359660:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | + | tig0016715:399624-399643 | Msa1359660:CDS | 55.0% | |
| TGGCGTCAAGCTACACCTTC+AGG | - | tig0016715:399814-399833 | None:intergenic | 55.0% | |
| CGTCAGGGAGCTCAATGAGC+GGG | - | tig0016715:392353-392372 | None:intergenic | 60.0% | |
| TTAGAGACCCAGCGTTGCCC+GGG | - | tig0016715:395389-395408 | None:intergenic | 60.0% | |
| CGTCAGGGAGCTCAATGAGC+GGG | - | tig0016715:392353-392372 | None:intergenic | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | + | tig0016715:399630-399649 | Msa1359660:CDS | 60.0% | |
| ACTCCAAAGCCACCGTGTGG+TGG | - | tig0016715:399636-399655 | None:intergenic | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | - | tig0016715:399639-399658 | None:intergenic | 60.0% | |
| !! | CCACACGGTGGCTTTGGAGT+AGG | + | tig0016715:399636-399655 | Msa1359660:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | + | tig0016715:399641-399660 | Msa1359660:CDS | 60.0% |
| GCAATCCTGAGTGGGTCACG+TGG | - | tig0016715:399723-399742 | None:intergenic | 60.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | - | tig0016715:392272-392291 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | - | tig0016715:392283-392302 | None:intergenic | 65.0% |
| AGACTCACGGCTGAGAGCGG+CGG | - | tig0016715:392565-392584 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | tig0016715:393486-393505 | None:intergenic | 65.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | - | tig0016715:392272-392291 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | - | tig0016715:392283-392302 | None:intergenic | 65.0% |
| AGACTCACGGCTGAGAGCGG+CGG | - | tig0016715:392565-392584 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | tig0016715:393486-393505 | None:intergenic | 65.0% | |
| !! | CAGCCAACGGGTACCGGTGA+AGG | - | tig0016715:399053-399072 | None:intergenic | 65.0% |
| CTGCCCCTCTTGCTGAGCTC+TGG | + | tig0016715:399537-399556 | Msa1359660:intron | 65.0% | |
| TGGCGGCGGCAACTTCTCGG+CGG | - | tig0016715:392269-392288 | None:intergenic | 70.0% | |
| TGGCGGCGGCAACTTCTCGG+CGG | - | tig0016715:392269-392288 | None:intergenic | 70.0% | |
| CGGCGGCAACTTCTCGGCGG+CGG | - | tig0016715:392266-392285 | None:intergenic | 75.0% | |
| CGGCGGCAACTTCTCGGCGG+CGG | - | tig0016715:392266-392285 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016715 | gene | 391689 | 400231 | 391689 | ID=Msa1359660;Name=Msa1359660 |
| tig0016715 | mRNA | 391689 | 400231 | 391689 | ID=Msa1359660-mRNA-1;Parent=Msa1359660;Name=Msa1359660-mRNA-1;_AED=0.34;_eAED=0.34;_QI=587|1|1|1|0.9|0.81|11|482|532 |
| tig0016715 | exon | 391689 | 391803 | 391689 | ID=Msa1359660-mRNA-1:exon:11477;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 395697 | 396648 | 395697 | ID=Msa1359660-mRNA-1:exon:11478;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 396784 | 396894 | 396784 | ID=Msa1359660-mRNA-1:exon:11479;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 397113 | 397226 | 397113 | ID=Msa1359660-mRNA-1:exon:11480;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 397370 | 397660 | 397370 | ID=Msa1359660-mRNA-1:exon:11481;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 397754 | 397864 | 397754 | ID=Msa1359660-mRNA-1:exon:11482;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 398035 | 398088 | 398035 | ID=Msa1359660-mRNA-1:exon:11483;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 398852 | 398931 | 398852 | ID=Msa1359660-mRNA-1:exon:11484;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 399029 | 399144 | 399029 | ID=Msa1359660-mRNA-1:exon:11485;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 399319 | 399433 | 399319 | ID=Msa1359660-mRNA-1:exon:11486;Parent=Msa1359660-mRNA-1 |
| tig0016715 | exon | 399623 | 400231 | 399623 | ID=Msa1359660-mRNA-1:exon:11487;Parent=Msa1359660-mRNA-1 |
| tig0016715 | five_prime_UTR | 391689 | 391803 | 391689 | ID=Msa1359660-mRNA-1:five_prime_utr;Parent=Msa1359660-mRNA-1 |
| tig0016715 | five_prime_UTR | 395697 | 396168 | 395697 | ID=Msa1359660-mRNA-1:five_prime_utr;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 396169 | 396648 | 396169 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 396784 | 396894 | 396784 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 397113 | 397226 | 397113 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 397370 | 397660 | 397370 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 397754 | 397864 | 397754 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 398035 | 398088 | 398035 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 398852 | 398931 | 398852 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 399029 | 399144 | 399029 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 399319 | 399433 | 399319 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | CDS | 399623 | 399749 | 399623 | ID=Msa1359660-mRNA-1:cds;Parent=Msa1359660-mRNA-1 |
| tig0016715 | three_prime_UTR | 399750 | 400231 | 399750 | ID=Msa1359660-mRNA-1:three_prime_utr;Parent=Msa1359660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
