Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360110 | XP_013453283.1 | 96.629 | 178 | 5 | 1 | 1 | 177 | 1 | 178 | 4.52e-123 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360110 | B7FIF5 | 96.629 | 178 | 5 | 1 | 1 | 177 | 1 | 178 | 2.16e-123 | 360 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0832350 | Msa1360110 | 0.816389 | 5.671630e-52 | -8.615850e-47 |
| Msa0983050 | Msa1360110 | 0.915209 | 7.723501e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360110 | MtrunA17_Chr5g0393481 | 96.629 | 178 | 5 | 1 | 1 | 177 | 1 | 178 | 4.16e-127 | 360 |
| Msa1360110 | MtrunA17_Chr5g0393541 | 77.778 | 207 | 34 | 4 | 7 | 208 | 3 | 202 | 1.79e-109 | 316 |
| Msa1360110 | MtrunA17_Chr5g0435251 | 29.524 | 105 | 70 | 2 | 15 | 115 | 6 | 110 | 4.64e-12 | 62.4 |
| Msa1360110 | MtrunA17_Chr8g0350031 | 27.966 | 118 | 83 | 2 | 15 | 131 | 6 | 122 | 6.69e-12 | 61.6 |
| Msa1360110 | MtrunA17_Chr8g0350021 | 27.119 | 118 | 84 | 2 | 15 | 131 | 6 | 122 | 6.60e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360110 | AT4G34150.1 | 60.116 | 173 | 57 | 3 | 7 | 169 | 4 | 174 | 1.07e-68 | 212 |
Find 86 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGCAGCAGCAGGTATTGC+TGG | 0.282116 | tig0016935:+121440 | None:intergenic |
| CTTTGCCCAGATTTCTGCCT+TGG | 0.304687 | tig0016935:-121061 | Msa1360110:three_prime_UTR |
| GCTAGACATCATCGTTTCTA+AGG | 0.314275 | tig0016935:+122859 | None:intergenic |
| GGAGGGTATGGCGATGGTGG+TGG | 0.323657 | tig0016935:+121350 | None:intergenic |
| TCTCACGAAGGCCTTCAATA+AGG | 0.328098 | tig0016935:+122494 | None:intergenic |
| AAGAATTACTTACCAGCGTT+TGG | 0.337334 | tig0016935:+121260 | None:intergenic |
| GGAGGATAAGAGTGGGGAGG+AGG | 0.339930 | tig0016935:+121332 | None:intergenic |
| TGGCGATGGTGGTGGTGGAT+AGG | 0.362864 | tig0016935:+121358 | None:intergenic |
| GTACGTACCTGTGCACGTTT+TGG | 0.367969 | tig0016935:+122616 | None:intergenic |
| AATGCTCCAAGGCAGAAATC+TGG | 0.371519 | tig0016935:+121055 | None:intergenic |
| GGGCAACCTCTCGAGGTTAC+TGG | 0.383160 | tig0016935:-122815 | Msa1360110:intron |
| GCTGGTGGTGTTGCCATGTA+TGG | 0.389828 | tig0016935:+121527 | None:intergenic |
| GGCGATGGTGGTGGTGGATA+GGG | 0.395311 | tig0016935:+121359 | None:intergenic |
| TAAGAGTGGGGAGGAGGGTA+TGG | 0.395418 | tig0016935:+121338 | None:intergenic |
| GGAGGAGGGTATGGCGATGG+TGG | 0.395565 | tig0016935:+121347 | None:intergenic |
| GTGTTGCCATGTATGGAGTA+TGG | 0.408909 | tig0016935:+121534 | None:intergenic |
| CTCACGAAGGCCTTCAATAA+GGG | 0.423667 | tig0016935:+122495 | None:intergenic |
| GGGTATGGCGATGGTGGTGG+TGG | 0.437690 | tig0016935:+121353 | None:intergenic |
| CTGAAGATGGAGGATAAGAG+TGG | 0.442433 | tig0016935:+121324 | None:intergenic |
| GTGAGATCAATGTTGCTGTT+TGG | 0.443748 | tig0016935:-122477 | Msa1360110:CDS |
| GAGGATAAGAGTGGGGAGGA+GGG | 0.450283 | tig0016935:+121333 | None:intergenic |
| GATGGATTGTGTGAAGCAAC+AGG | 0.451681 | tig0016935:+121383 | None:intergenic |
| AGCAGTCTCGTCATATAATC+AGG | 0.453464 | tig0016935:-121507 | Msa1360110:CDS |
| GGAGGATAACCTGGAGGTGG+AGG | 0.455430 | tig0016935:+121281 | None:intergenic |
| CCAGCGTTTGGAGGATAACC+TGG | 0.457048 | tig0016935:+121272 | None:intergenic |
| CCTGGAGGTGGAGGGTATGA+AGG | 0.459154 | tig0016935:+121290 | None:intergenic |
| TGAAGATGGAGGATAAGAGT+GGG | 0.462321 | tig0016935:+121325 | None:intergenic |
| ACTTGTTGGTGGCGTATTCA+AGG | 0.471023 | tig0016935:+122645 | None:intergenic |
| GTATGGCTTGAGGAGGAGCC+TGG | 0.472095 | tig0016935:+121551 | None:intergenic |
| TTGCACAAGGTTCTCTCTCA+AGG | 0.481086 | tig0016935:-122319 | Msa1360110:CDS |
| AATTAGAGTGTGGTTGTTGT+GGG | 0.481190 | tig0016935:+121471 | None:intergenic |
| AGGGTATGAAGGTGGTGGAT+AGG | 0.481584 | tig0016935:+121301 | None:intergenic |
| TAATGTCACAGTACTCAGTA+TGG | 0.487423 | tig0016935:+121141 | None:intergenic |
| GGAACGATAGCGGGGATCCA+AGG | 0.490479 | tig0016935:-122836 | Msa1360110:CDS |
| TAATTAGAGTGTGGTTGTTG+TGG | 0.492816 | tig0016935:+121470 | None:intergenic |
| TGGGGAGGAGGGTATGGCGA+TGG | 0.501516 | tig0016935:+121344 | None:intergenic |
| GGTGGTGGATAGGCTGAAGA+TGG | 0.504457 | tig0016935:+121311 | None:intergenic |
| CGAAATTGAAGGACACAGAA+TGG | 0.506439 | tig0016935:-122694 | Msa1360110:CDS |
| ATGCTCCAAGGCAGAAATCT+GGG | 0.506646 | tig0016935:+121056 | None:intergenic |
| CTCAAGCCATACTCCATACA+TGG | 0.508335 | tig0016935:-121540 | Msa1360110:CDS |
| CCTTCATACCCTCCACCTCC+AGG | 0.523848 | tig0016935:-121290 | Msa1360110:CDS |
| GTGTGGTTGTTGTGGGTAGT+AGG | 0.528734 | tig0016935:+121478 | None:intergenic |
| AATTACTTACCAGCGTTTGG+AGG | 0.530399 | tig0016935:+121263 | None:intergenic |
| TGTGAAGCAACAGGGTAAGA+TGG | 0.531401 | tig0016935:+121392 | None:intergenic |
| TTCCGAACCAAAACGTGCAC+AGG | 0.538149 | tig0016935:-122623 | Msa1360110:intron |
| TAACCTCGAGAGGTTGCCCT+TGG | 0.543830 | tig0016935:+122819 | None:intergenic |
| GGTGGTGGTGGATAGGGTGA+TGG | 0.543866 | tig0016935:+121365 | None:intergenic |
| GCGTATTCAAGGCAAACATA+AGG | 0.547821 | tig0016935:+122656 | None:intergenic |
| GGTGGAGGGTATGAAGGTGG+TGG | 0.549199 | tig0016935:+121296 | None:intergenic |
| TTTGGTTCGGAACTTGTTGG+TGG | 0.550891 | tig0016935:+122634 | None:intergenic |
| GAACGATAGCGGGGATCCAA+GGG | 0.561392 | tig0016935:-122835 | Msa1360110:CDS |
| ACGTACCTGGTGATTCACTT+TGG | 0.569600 | tig0016935:+121670 | None:intergenic |
| CATTAGGGTTCAATTGCACA+AGG | 0.570787 | tig0016935:-122332 | Msa1360110:intron |
| TGATTATATGACGAGACTGC+TGG | 0.571501 | tig0016935:+121509 | None:intergenic |
| TGCTTACCAGTAACCTCGAG+AGG | 0.576572 | tig0016935:+122809 | None:intergenic |
| GGTGGATAGGCTGAAGATGG+AGG | 0.577125 | tig0016935:+121314 | None:intergenic |
| ATAAGCAAGACACGTTGTTG+TGG | 0.580442 | tig0016935:-122909 | None:intergenic |
| CAACGAAAGCGAAAGCATGA+TGG | 0.580744 | tig0016935:+121102 | None:intergenic |
| TTTGGAGGATAACCTGGAGG+TGG | 0.580887 | tig0016935:+121278 | None:intergenic |
| CACAGTACTCAGTATGGCGG+AGG | 0.583962 | tig0016935:+121147 | None:intergenic |
| TGTGTGTTGCTCGAAATTGA+AGG | 0.591480 | tig0016935:-122705 | Msa1360110:CDS |
| GATGGAGGATAAGAGTGGGG+AGG | 0.596813 | tig0016935:+121329 | None:intergenic |
| GATCCAAGGGCAACCTCTCG+AGG | 0.597623 | tig0016935:-122822 | Msa1360110:CDS |
| GCAACAGGGTAAGATGGTAG+TGG | 0.600028 | tig0016935:+121398 | None:intergenic |
| GAGGATAACCTGGAGGTGGA+GGG | 0.601472 | tig0016935:+121282 | None:intergenic |
| GAAGATGGAGGATAAGAGTG+GGG | 0.611331 | tig0016935:+121326 | None:intergenic |
| ACAGGGTAAGATGGTAGTGG+TGG | 0.617269 | tig0016935:+121401 | None:intergenic |
| GGTAATATATTGCAGAAACC+AGG | 0.624486 | tig0016935:-121569 | Msa1360110:intron |
| AAACTTAGACAAATGCTCCA+AGG | 0.629387 | tig0016935:+121044 | None:intergenic |
| GATGTCTAGCGGAACGATAG+CGG | 0.631709 | tig0016935:-122846 | Msa1360110:CDS |
| GGAGGTGGAGGGTATGAAGG+TGG | 0.632925 | tig0016935:+121293 | None:intergenic |
| CCAGGTTATCCTCCAAACGC+TGG | 0.646205 | tig0016935:-121272 | Msa1360110:intron |
| TGTCTGGTTGGCAGACACGC+AGG | 0.665089 | tig0016935:-121725 | Msa1360110:intron |
| TGTCTAGCGGAACGATAGCG+GGG | 0.665238 | tig0016935:-122844 | Msa1360110:CDS |
| GTATGGAGTATGGCTTGAGG+AGG | 0.667986 | tig0016935:+121544 | None:intergenic |
| GGTTGTTGTGGGTAGTAGGA+CGG | 0.678586 | tig0016935:+121482 | None:intergenic |
| TAATGCCAAAGTGAATCACC+AGG | 0.688532 | tig0016935:-121675 | Msa1360110:intron |
| GGATTGTGATAATTAGAGTG+TGG | 0.688865 | tig0016935:+121461 | None:intergenic |
| GGTGCCGATAAAATCATCAG+AGG | 0.696455 | tig0016935:+122438 | None:intergenic |
| TTAGAAACGATGATGTCTAG+CGG | 0.703905 | tig0016935:-122857 | Msa1360110:exon |
| TGTCACAGTACTCAGTATGG+CGG | 0.715217 | tig0016935:+121144 | None:intergenic |
| TTATATGACGAGACTGCTGG+TGG | 0.716775 | tig0016935:+121512 | None:intergenic |
| ATGGATTGTGTGAAGCAACA+GGG | 0.718917 | tig0016935:+121384 | None:intergenic |
| CAGCAACATTGATCTCACGA+AGG | 0.744037 | tig0016935:+122482 | None:intergenic |
| CATGTATGGAGTATGGCTTG+AGG | 0.747281 | tig0016935:+121541 | None:intergenic |
| GCGTTTGGAGGATAACCTGG+AGG | 0.754328 | tig0016935:+121275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATATATATGTATATATT+AGG | + | tig0016935:121528-121547 | None:intergenic | 10.0% |
| !! | TATATATATATATATAAGCA+AGG | - | tig0016935:121937-121956 | Msa1360110:intron | 10.0% |
| !! | AAATAAATATTGATGTAAAT+AGG | + | tig0016935:122245-122264 | None:intergenic | 10.0% |
| !! | ATCATATATATGTATATATT+AGG | + | tig0016935:121528-121547 | None:intergenic | 10.0% |
| !! | TATATATATATATATAAGCA+AGG | - | tig0016935:121937-121956 | Msa1360110:intron | 10.0% |
| !! | AAATAAATATTGATGTAAAT+AGG | + | tig0016935:122245-122264 | None:intergenic | 10.0% |
| !!! | TTTTACTCATTCATTTATTT+AGG | - | tig0016935:121655-121674 | Msa1360110:intron | 15.0% |
| !! | TTACATATAATATATATGTG+AGG | + | tig0016935:121789-121808 | None:intergenic | 15.0% |
| !!! | AAAAACCATTTTTAATTTGT+TGG | - | tig0016935:122883-122902 | Msa1360110:five_prime_UTR | 15.0% |
| !!! | TTTTACTCATTCATTTATTT+AGG | - | tig0016935:121655-121674 | Msa1360110:intron | 15.0% |
| !! | TTACATATAATATATATGTG+AGG | + | tig0016935:121789-121808 | None:intergenic | 15.0% |
| !!! | AAAAACCATTTTTAATTTGT+TGG | - | tig0016935:122883-122902 | Msa1360110:five_prime_UTR | 15.0% |
| !!! | TTATATCATTCATCTTTTCT+AGG | + | tig0016935:121820-121839 | None:intergenic | 20.0% |
| !! | TGATATAAAAAATGTGAGAT+AGG | - | tig0016935:121832-121851 | Msa1360110:intron | 20.0% |
| !!! | CAAGAGACAATTTTATTTTA+TGG | + | tig0016935:121859-121878 | None:intergenic | 20.0% |
| !! | ATGAATGTATAATACTTGTA+AGG | + | tig0016935:122018-122037 | None:intergenic | 20.0% |
| !! | ATTTACATACATGTAATGTA+AGG | - | tig0016935:122261-122280 | Msa1360110:intron | 20.0% |
| !!! | TTATATCATTCATCTTTTCT+AGG | + | tig0016935:121820-121839 | None:intergenic | 20.0% |
| !! | TGATATAAAAAATGTGAGAT+AGG | - | tig0016935:121832-121851 | Msa1360110:intron | 20.0% |
| !!! | CAAGAGACAATTTTATTTTA+TGG | + | tig0016935:121859-121878 | None:intergenic | 20.0% |
| !! | ATGAATGTATAATACTTGTA+AGG | + | tig0016935:122018-122037 | None:intergenic | 20.0% |
| !! | ATTTACATACATGTAATGTA+AGG | - | tig0016935:122261-122280 | Msa1360110:intron | 20.0% |
| ! | AAATAATAGTACGTACTTTC+CGG | + | tig0016935:121473-121492 | None:intergenic | 25.0% |
| ! | ATATATGATTCTCCTTCATT+AGG | - | tig0016935:121539-121558 | Msa1360110:CDS | 25.0% |
| ! | TATATGATTCTCCTTCATTA+GGG | - | tig0016935:121540-121559 | Msa1360110:CDS | 25.0% |
| ! | TGAATGAGTAAAATAACATG+AGG | + | tig0016935:121648-121667 | None:intergenic | 25.0% |
| ! | ATTAATAAGTCTGTTTGTGA+TGG | - | tig0016935:122297-122316 | Msa1360110:CDS | 25.0% |
| ! | TTTCTTTCTTTCTTTCTTTC+AGG | - | tig0016935:122706-122725 | Msa1360110:CDS | 25.0% |
| ! | TCATGCCAACAAATTAAAAA+TGG | + | tig0016935:122891-122910 | None:intergenic | 25.0% |
| ! | AAATAATAGTACGTACTTTC+CGG | + | tig0016935:121473-121492 | None:intergenic | 25.0% |
| ! | ATATATGATTCTCCTTCATT+AGG | - | tig0016935:121539-121558 | Msa1360110:CDS | 25.0% |
| ! | TATATGATTCTCCTTCATTA+GGG | - | tig0016935:121540-121559 | Msa1360110:CDS | 25.0% |
| ! | TGAATGAGTAAAATAACATG+AGG | + | tig0016935:121648-121667 | None:intergenic | 25.0% |
| ! | ATTAATAAGTCTGTTTGTGA+TGG | - | tig0016935:122297-122316 | Msa1360110:CDS | 25.0% |
| ! | TTTCTTTCTTTCTTTCTTTC+AGG | - | tig0016935:122706-122725 | Msa1360110:CDS | 25.0% |
| ! | TCATGCCAACAAATTAAAAA+TGG | + | tig0016935:122891-122910 | None:intergenic | 25.0% |
| ! | GACATGATGATAATGATGAA+TGG | - | tig0016935:121137-121156 | Msa1360110:exon | 30.0% |
| ACAACTGCAAATCAAATCAA+AGG | + | tig0016935:121165-121184 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGACTCCTTCAATT+TGG | - | tig0016935:121321-121340 | Msa1360110:CDS | 30.0% |
| !! | AGTAGTACTGATACAGATTT+GGG | + | tig0016935:121687-121706 | None:intergenic | 30.0% |
| !! | TAGTAGTACTGATACAGATT+TGG | + | tig0016935:121688-121707 | None:intergenic | 30.0% |
| ATTTGTGTGTTGTGAATTTC+CGG | - | tig0016935:122042-122061 | Msa1360110:intron | 30.0% | |
| ACTTGAACGAACAATAGTAT+CGG | + | tig0016935:122086-122105 | None:intergenic | 30.0% | |
| !! | ACTATTGTTCGTTCAAGTTT+TGG | - | tig0016935:122088-122107 | Msa1360110:intron | 30.0% |
| CATACATGTAATGTAAGGAT+TGG | - | tig0016935:122266-122285 | Msa1360110:intron | 30.0% | |
| GAGATGAAAATTGAAATGGT+TGG | + | tig0016935:122662-122681 | None:intergenic | 30.0% | |
| GCAAGAGATGAAAATTGAAA+TGG | + | tig0016935:122666-122685 | None:intergenic | 30.0% | |
| ! | GACATGATGATAATGATGAA+TGG | - | tig0016935:121137-121156 | Msa1360110:exon | 30.0% |
| ACAACTGCAAATCAAATCAA+AGG | + | tig0016935:121165-121184 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGACTCCTTCAATT+TGG | - | tig0016935:121321-121340 | Msa1360110:CDS | 30.0% |
| !! | AGTAGTACTGATACAGATTT+GGG | + | tig0016935:121687-121706 | None:intergenic | 30.0% |
| !! | TAGTAGTACTGATACAGATT+TGG | + | tig0016935:121688-121707 | None:intergenic | 30.0% |
| ATTTGTGTGTTGTGAATTTC+CGG | - | tig0016935:122042-122061 | Msa1360110:intron | 30.0% | |
| ACTTGAACGAACAATAGTAT+CGG | + | tig0016935:122086-122105 | None:intergenic | 30.0% | |
| !! | ACTATTGTTCGTTCAAGTTT+TGG | - | tig0016935:122088-122107 | Msa1360110:intron | 30.0% |
| CATACATGTAATGTAAGGAT+TGG | - | tig0016935:122266-122285 | Msa1360110:intron | 30.0% | |
| GAGATGAAAATTGAAATGGT+TGG | + | tig0016935:122662-122681 | None:intergenic | 30.0% | |
| GCAAGAGATGAAAATTGAAA+TGG | + | tig0016935:122666-122685 | None:intergenic | 30.0% | |
| TTAGAAACGATGATGTCTAG+CGG | - | tig0016935:121030-121049 | Msa1360110:three_prime_UTR | 35.0% | |
| AGGAGTCAACAAAAAGTCAA+GGG | + | tig0016935:121315-121334 | None:intergenic | 35.0% | |
| AAGGAGTCAACAAAAAGTCA+AGG | + | tig0016935:121316-121335 | None:intergenic | 35.0% | |
| TCCTTCAATTTGGATTCAGA+TGG | - | tig0016935:121331-121350 | Msa1360110:CDS | 35.0% | |
| ACCATCTGAATCCAAATTGA+AGG | + | tig0016935:121335-121354 | None:intergenic | 35.0% | |
| TTCAATTTGGATTCAGATGG+TGG | - | tig0016935:121334-121353 | Msa1360110:CDS | 35.0% | |
| CGAACTTCTCTTGAAAAACA+GGG | + | tig0016935:121366-121385 | None:intergenic | 35.0% | |
| ACGAACTTCTCTTGAAAAAC+AGG | + | tig0016935:121367-121386 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTTCCCTTATTGA+AGG | - | tig0016935:121382-121401 | Msa1360110:CDS | 35.0% |
| ! | GTCACCTCTGATGATTTTAT+CGG | - | tig0016935:121445-121464 | Msa1360110:CDS | 35.0% |
| TGGCCACTTCAAACTAAAAA+TGG | - | tig0016935:121607-121626 | Msa1360110:intron | 35.0% | |
| !!! | CTGCCATTTTTAGTTTGAAG+TGG | + | tig0016935:121613-121632 | None:intergenic | 35.0% |
| CACTTCAAACTAAAAATGGC+AGG | - | tig0016935:121611-121630 | Msa1360110:intron | 35.0% | |
| !! | TAATTTTGATGTGCGTGTGT+GGG | + | tig0016935:121729-121748 | None:intergenic | 35.0% |
| !! | ATAATTTTGATGTGCGTGTG+TGG | + | tig0016935:121730-121749 | None:intergenic | 35.0% |
| ATGTAAATAGGTTACGTACC+TGG | + | tig0016935:122233-122252 | None:intergenic | 35.0% | |
| GGTAATATATTGCAGAAACC+AGG | - | tig0016935:122318-122337 | Msa1360110:CDS | 35.0% | |
| AATTAGAGTGTGGTTGTTGT+GGG | + | tig0016935:122419-122438 | None:intergenic | 35.0% | |
| TAATTAGAGTGTGGTTGTTG+TGG | + | tig0016935:122420-122439 | None:intergenic | 35.0% | |
| GGATTGTGATAATTAGAGTG+TGG | + | tig0016935:122429-122448 | None:intergenic | 35.0% | |
| AAGAATTACTTACCAGCGTT+TGG | + | tig0016935:122630-122649 | None:intergenic | 35.0% | |
| TAATGTCACAGTACTCAGTA+TGG | + | tig0016935:122749-122768 | None:intergenic | 35.0% | |
| AAACTTAGACAAATGCTCCA+AGG | + | tig0016935:122846-122865 | None:intergenic | 35.0% | |
| TTAGAAACGATGATGTCTAG+CGG | - | tig0016935:121030-121049 | Msa1360110:three_prime_UTR | 35.0% | |
| AGGAGTCAACAAAAAGTCAA+GGG | + | tig0016935:121315-121334 | None:intergenic | 35.0% | |
| AAGGAGTCAACAAAAAGTCA+AGG | + | tig0016935:121316-121335 | None:intergenic | 35.0% | |
| TCCTTCAATTTGGATTCAGA+TGG | - | tig0016935:121331-121350 | Msa1360110:CDS | 35.0% | |
| ACCATCTGAATCCAAATTGA+AGG | + | tig0016935:121335-121354 | None:intergenic | 35.0% | |
| TTCAATTTGGATTCAGATGG+TGG | - | tig0016935:121334-121353 | Msa1360110:CDS | 35.0% | |
| CGAACTTCTCTTGAAAAACA+GGG | + | tig0016935:121366-121385 | None:intergenic | 35.0% | |
| ACGAACTTCTCTTGAAAAAC+AGG | + | tig0016935:121367-121386 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTTCCCTTATTGA+AGG | - | tig0016935:121382-121401 | Msa1360110:CDS | 35.0% |
| ! | GTCACCTCTGATGATTTTAT+CGG | - | tig0016935:121445-121464 | Msa1360110:CDS | 35.0% |
| TGGCCACTTCAAACTAAAAA+TGG | - | tig0016935:121607-121626 | Msa1360110:intron | 35.0% | |
| !!! | CTGCCATTTTTAGTTTGAAG+TGG | + | tig0016935:121613-121632 | None:intergenic | 35.0% |
| CACTTCAAACTAAAAATGGC+AGG | - | tig0016935:121611-121630 | Msa1360110:intron | 35.0% | |
| !! | TAATTTTGATGTGCGTGTGT+GGG | + | tig0016935:121729-121748 | None:intergenic | 35.0% |
| !! | ATAATTTTGATGTGCGTGTG+TGG | + | tig0016935:121730-121749 | None:intergenic | 35.0% |
| ATGTAAATAGGTTACGTACC+TGG | + | tig0016935:122233-122252 | None:intergenic | 35.0% | |
| GGTAATATATTGCAGAAACC+AGG | - | tig0016935:122318-122337 | Msa1360110:CDS | 35.0% | |
| AATTAGAGTGTGGTTGTTGT+GGG | + | tig0016935:122419-122438 | None:intergenic | 35.0% | |
| TAATTAGAGTGTGGTTGTTG+TGG | + | tig0016935:122420-122439 | None:intergenic | 35.0% | |
| GGATTGTGATAATTAGAGTG+TGG | + | tig0016935:122429-122448 | None:intergenic | 35.0% | |
| AAGAATTACTTACCAGCGTT+TGG | + | tig0016935:122630-122649 | None:intergenic | 35.0% | |
| TAATGTCACAGTACTCAGTA+TGG | + | tig0016935:122749-122768 | None:intergenic | 35.0% | |
| AAACTTAGACAAATGCTCCA+AGG | + | tig0016935:122846-122865 | None:intergenic | 35.0% | |
| GCTAGACATCATCGTTTCTA+AGG | + | tig0016935:121031-121050 | None:intergenic | 40.0% | |
| ! | TGTGTGTTGCTCGAAATTGA+AGG | - | tig0016935:121182-121201 | Msa1360110:intron | 40.0% |
| CGAAATTGAAGGACACAGAA+TGG | - | tig0016935:121193-121212 | Msa1360110:intron | 40.0% | |
| GCGTATTCAAGGCAAACATA+AGG | + | tig0016935:121234-121253 | None:intergenic | 40.0% | |
| ! | GTGAGATCAATGTTGCTGTT+TGG | - | tig0016935:121410-121429 | Msa1360110:CDS | 40.0% |
| ! | TCTGATGATTTTATCGGCAC+CGG | - | tig0016935:121451-121470 | Msa1360110:CDS | 40.0% |
| GTGCAATTGAACCCTAATGA+AGG | + | tig0016935:121554-121573 | None:intergenic | 40.0% | |
| CATTAGGGTTCAATTGCACA+AGG | - | tig0016935:121555-121574 | Msa1360110:CDS | 40.0% | |
| !! | AAGGTTTTGATGACTCTGCA+TGG | - | tig0016935:121587-121606 | Msa1360110:intron | 40.0% |
| GAGAATCGATCTATGAAAGC+CGG | + | tig0016935:122064-122083 | None:intergenic | 40.0% | |
| GGGAAAAGATGCATTATGCA+TGG | + | tig0016935:122135-122154 | None:intergenic | 40.0% | |
| ! | TCTTTTCCCTTTTGTCTGTC+TGG | - | tig0016935:122146-122165 | Msa1360110:intron | 40.0% |
| TAATGCCAAAGTGAATCACC+AGG | - | tig0016935:122212-122231 | Msa1360110:intron | 40.0% | |
| TGATTATATGACGAGACTGC+TGG | + | tig0016935:122381-122400 | None:intergenic | 40.0% | |
| AGCAGTCTCGTCATATAATC+AGG | - | tig0016935:122380-122399 | Msa1360110:intron | 40.0% | |
| ! | ATGGATTGTGTGAAGCAACA+GGG | + | tig0016935:122506-122525 | None:intergenic | 40.0% |
| TGAAGATGGAGGATAAGAGT+GGG | + | tig0016935:122565-122584 | None:intergenic | 40.0% | |
| AATTACTTACCAGCGTTTGG+AGG | + | tig0016935:122627-122646 | None:intergenic | 40.0% | |
| GCTAGACATCATCGTTTCTA+AGG | + | tig0016935:121031-121050 | None:intergenic | 40.0% | |
| ! | TGTGTGTTGCTCGAAATTGA+AGG | - | tig0016935:121182-121201 | Msa1360110:intron | 40.0% |
| CGAAATTGAAGGACACAGAA+TGG | - | tig0016935:121193-121212 | Msa1360110:intron | 40.0% | |
| GCGTATTCAAGGCAAACATA+AGG | + | tig0016935:121234-121253 | None:intergenic | 40.0% | |
| ! | GTGAGATCAATGTTGCTGTT+TGG | - | tig0016935:121410-121429 | Msa1360110:CDS | 40.0% |
| ! | TCTGATGATTTTATCGGCAC+CGG | - | tig0016935:121451-121470 | Msa1360110:CDS | 40.0% |
| GTGCAATTGAACCCTAATGA+AGG | + | tig0016935:121554-121573 | None:intergenic | 40.0% | |
| CATTAGGGTTCAATTGCACA+AGG | - | tig0016935:121555-121574 | Msa1360110:CDS | 40.0% | |
| !! | AAGGTTTTGATGACTCTGCA+TGG | - | tig0016935:121587-121606 | Msa1360110:intron | 40.0% |
| GAGAATCGATCTATGAAAGC+CGG | + | tig0016935:122064-122083 | None:intergenic | 40.0% | |
| GGGAAAAGATGCATTATGCA+TGG | + | tig0016935:122135-122154 | None:intergenic | 40.0% | |
| ! | TCTTTTCCCTTTTGTCTGTC+TGG | - | tig0016935:122146-122165 | Msa1360110:intron | 40.0% |
| TAATGCCAAAGTGAATCACC+AGG | - | tig0016935:122212-122231 | Msa1360110:intron | 40.0% | |
| TGATTATATGACGAGACTGC+TGG | + | tig0016935:122381-122400 | None:intergenic | 40.0% | |
| AGCAGTCTCGTCATATAATC+AGG | - | tig0016935:122380-122399 | Msa1360110:intron | 40.0% | |
| ! | ATGGATTGTGTGAAGCAACA+GGG | + | tig0016935:122506-122525 | None:intergenic | 40.0% |
| TGAAGATGGAGGATAAGAGT+GGG | + | tig0016935:122565-122584 | None:intergenic | 40.0% | |
| AATTACTTACCAGCGTTTGG+AGG | + | tig0016935:122627-122646 | None:intergenic | 40.0% | |
| !! | ACTTGTTGGTGGCGTATTCA+AGG | + | tig0016935:121245-121264 | None:intergenic | 45.0% |
| !! | TTTGGTTCGGAACTTGTTGG+TGG | + | tig0016935:121256-121275 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCGGAACTTGT+TGG | + | tig0016935:121259-121278 | None:intergenic | 45.0% |
| !!! | TACCTGTGCACGTTTTGGTT+CGG | + | tig0016935:121269-121288 | None:intergenic | 45.0% |
| CTCACGAAGGCCTTCAATAA+GGG | + | tig0016935:121395-121414 | None:intergenic | 45.0% | |
| TCTCACGAAGGCCTTCAATA+AGG | + | tig0016935:121396-121415 | None:intergenic | 45.0% | |
| CAGCAACATTGATCTCACGA+AGG | + | tig0016935:121408-121427 | None:intergenic | 45.0% | |
| !! | GGTGCCGATAAAATCATCAG+AGG | + | tig0016935:121452-121471 | None:intergenic | 45.0% |
| TTGCACAAGGTTCTCTCTCA+AGG | - | tig0016935:121568-121587 | Msa1360110:intron | 45.0% | |
| ! | TTCCCTTTTGTCTGTCTGGT+TGG | - | tig0016935:122150-122169 | Msa1360110:intron | 45.0% |
| TGCCAACCAGACAGACAAAA+GGG | + | tig0016935:122155-122174 | None:intergenic | 45.0% | |
| ACGTACCTGGTGATTCACTT+TGG | + | tig0016935:122220-122239 | None:intergenic | 45.0% | |
| CATGTATGGAGTATGGCTTG+AGG | + | tig0016935:122349-122368 | None:intergenic | 45.0% | |
| CTCAAGCCATACTCCATACA+TGG | - | tig0016935:122347-122366 | Msa1360110:intron | 45.0% | |
| GTGTTGCCATGTATGGAGTA+TGG | + | tig0016935:122356-122375 | None:intergenic | 45.0% | |
| TTATATGACGAGACTGCTGG+TGG | + | tig0016935:122378-122397 | None:intergenic | 45.0% | |
| TGTGAAGCAACAGGGTAAGA+TGG | + | tig0016935:122498-122517 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGTGAAGCAAC+AGG | + | tig0016935:122507-122526 | None:intergenic | 45.0% |
| GAAGATGGAGGATAAGAGTG+GGG | + | tig0016935:122564-122583 | None:intergenic | 45.0% | |
| CTGAAGATGGAGGATAAGAG+TGG | + | tig0016935:122566-122585 | None:intergenic | 45.0% | |
| TGTCACAGTACTCAGTATGG+CGG | + | tig0016935:122746-122765 | None:intergenic | 45.0% | |
| ! | CAACGAAAGCGAAAGCATGA+TGG | + | tig0016935:122788-122807 | None:intergenic | 45.0% |
| ATGCTCCAAGGCAGAAATCT+GGG | + | tig0016935:122834-122853 | None:intergenic | 45.0% | |
| AATGCTCCAAGGCAGAAATC+TGG | + | tig0016935:122835-122854 | None:intergenic | 45.0% | |
| !! | ACTTGTTGGTGGCGTATTCA+AGG | + | tig0016935:121245-121264 | None:intergenic | 45.0% |
| !! | TTTGGTTCGGAACTTGTTGG+TGG | + | tig0016935:121256-121275 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCGGAACTTGT+TGG | + | tig0016935:121259-121278 | None:intergenic | 45.0% |
| !!! | TACCTGTGCACGTTTTGGTT+CGG | + | tig0016935:121269-121288 | None:intergenic | 45.0% |
| CTCACGAAGGCCTTCAATAA+GGG | + | tig0016935:121395-121414 | None:intergenic | 45.0% | |
| TCTCACGAAGGCCTTCAATA+AGG | + | tig0016935:121396-121415 | None:intergenic | 45.0% | |
| CAGCAACATTGATCTCACGA+AGG | + | tig0016935:121408-121427 | None:intergenic | 45.0% | |
| !! | GGTGCCGATAAAATCATCAG+AGG | + | tig0016935:121452-121471 | None:intergenic | 45.0% |
| TTGCACAAGGTTCTCTCTCA+AGG | - | tig0016935:121568-121587 | Msa1360110:intron | 45.0% | |
| ! | TTCCCTTTTGTCTGTCTGGT+TGG | - | tig0016935:122150-122169 | Msa1360110:intron | 45.0% |
| TGCCAACCAGACAGACAAAA+GGG | + | tig0016935:122155-122174 | None:intergenic | 45.0% | |
| ACGTACCTGGTGATTCACTT+TGG | + | tig0016935:122220-122239 | None:intergenic | 45.0% | |
| CATGTATGGAGTATGGCTTG+AGG | + | tig0016935:122349-122368 | None:intergenic | 45.0% | |
| CTCAAGCCATACTCCATACA+TGG | - | tig0016935:122347-122366 | Msa1360110:intron | 45.0% | |
| GTGTTGCCATGTATGGAGTA+TGG | + | tig0016935:122356-122375 | None:intergenic | 45.0% | |
| TTATATGACGAGACTGCTGG+TGG | + | tig0016935:122378-122397 | None:intergenic | 45.0% | |
| TGTGAAGCAACAGGGTAAGA+TGG | + | tig0016935:122498-122517 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGTGAAGCAAC+AGG | + | tig0016935:122507-122526 | None:intergenic | 45.0% |
| GAAGATGGAGGATAAGAGTG+GGG | + | tig0016935:122564-122583 | None:intergenic | 45.0% | |
| CTGAAGATGGAGGATAAGAG+TGG | + | tig0016935:122566-122585 | None:intergenic | 45.0% | |
| TGTCACAGTACTCAGTATGG+CGG | + | tig0016935:122746-122765 | None:intergenic | 45.0% | |
| ! | CAACGAAAGCGAAAGCATGA+TGG | + | tig0016935:122788-122807 | None:intergenic | 45.0% |
| ATGCTCCAAGGCAGAAATCT+GGG | + | tig0016935:122834-122853 | None:intergenic | 45.0% | |
| AATGCTCCAAGGCAGAAATC+TGG | + | tig0016935:122835-122854 | None:intergenic | 45.0% | |
| GATGTCTAGCGGAACGATAG+CGG | - | tig0016935:121041-121060 | Msa1360110:three_prime_UTR | 50.0% | |
| ATGTCTAGCGGAACGATAGC+GGG | - | tig0016935:121042-121061 | Msa1360110:three_prime_UTR | 50.0% | |
| TGCTTACCAGTAACCTCGAG+AGG | + | tig0016935:121081-121100 | None:intergenic | 50.0% | |
| TTCCGAACCAAAACGTGCAC+AGG | - | tig0016935:121264-121283 | Msa1360110:intron | 50.0% | |
| ! | GTACGTACCTGTGCACGTTT+TGG | + | tig0016935:121274-121293 | None:intergenic | 50.0% |
| ACGTGCACAGGTACGTACTT+AGG | - | tig0016935:121276-121295 | Msa1360110:CDS | 50.0% | |
| GTGTGTGGGATATGTAGTCG+CGG | + | tig0016935:121715-121734 | None:intergenic | 50.0% | |
| CTGCCAACCAGACAGACAAA+AGG | + | tig0016935:122156-122175 | None:intergenic | 50.0% | |
| GTATGGAGTATGGCTTGAGG+AGG | + | tig0016935:122346-122365 | None:intergenic | 50.0% | |
| GGTTGTTGTGGGTAGTAGGA+CGG | + | tig0016935:122408-122427 | None:intergenic | 50.0% | |
| GTGTGGTTGTTGTGGGTAGT+AGG | + | tig0016935:122412-122431 | None:intergenic | 50.0% | |
| !! | ACAGGGTAAGATGGTAGTGG+TGG | + | tig0016935:122489-122508 | None:intergenic | 50.0% |
| GCAACAGGGTAAGATGGTAG+TGG | + | tig0016935:122492-122511 | None:intergenic | 50.0% | |
| !! | AGGGTATGAAGGTGGTGGAT+AGG | + | tig0016935:122589-122608 | None:intergenic | 50.0% |
| TTTGGAGGATAACCTGGAGG+TGG | + | tig0016935:122612-122631 | None:intergenic | 50.0% | |
| CTTTGCCCAGATTTCTGCCT+TGG | - | tig0016935:122826-122845 | Msa1360110:CDS | 50.0% | |
| GATGTCTAGCGGAACGATAG+CGG | - | tig0016935:121041-121060 | Msa1360110:three_prime_UTR | 50.0% | |
| ATGTCTAGCGGAACGATAGC+GGG | - | tig0016935:121042-121061 | Msa1360110:three_prime_UTR | 50.0% | |
| TGCTTACCAGTAACCTCGAG+AGG | + | tig0016935:121081-121100 | None:intergenic | 50.0% | |
| TTCCGAACCAAAACGTGCAC+AGG | - | tig0016935:121264-121283 | Msa1360110:intron | 50.0% | |
| ! | GTACGTACCTGTGCACGTTT+TGG | + | tig0016935:121274-121293 | None:intergenic | 50.0% |
| ACGTGCACAGGTACGTACTT+AGG | - | tig0016935:121276-121295 | Msa1360110:CDS | 50.0% | |
| GTGTGTGGGATATGTAGTCG+CGG | + | tig0016935:121715-121734 | None:intergenic | 50.0% | |
| CTGCCAACCAGACAGACAAA+AGG | + | tig0016935:122156-122175 | None:intergenic | 50.0% | |
| GTATGGAGTATGGCTTGAGG+AGG | + | tig0016935:122346-122365 | None:intergenic | 50.0% | |
| GGTTGTTGTGGGTAGTAGGA+CGG | + | tig0016935:122408-122427 | None:intergenic | 50.0% | |
| GTGTGGTTGTTGTGGGTAGT+AGG | + | tig0016935:122412-122431 | None:intergenic | 50.0% | |
| !! | ACAGGGTAAGATGGTAGTGG+TGG | + | tig0016935:122489-122508 | None:intergenic | 50.0% |
| GCAACAGGGTAAGATGGTAG+TGG | + | tig0016935:122492-122511 | None:intergenic | 50.0% | |
| !! | AGGGTATGAAGGTGGTGGAT+AGG | + | tig0016935:122589-122608 | None:intergenic | 50.0% |
| TTTGGAGGATAACCTGGAGG+TGG | + | tig0016935:122612-122631 | None:intergenic | 50.0% | |
| CTTTGCCCAGATTTCTGCCT+TGG | - | tig0016935:122826-122845 | Msa1360110:CDS | 50.0% | |
| TGTCTAGCGGAACGATAGCG+GGG | - | tig0016935:121043-121062 | Msa1360110:three_prime_UTR | 55.0% | |
| !! | GAACGATAGCGGGGATCCAA+GGG | - | tig0016935:121052-121071 | Msa1360110:three_prime_UTR | 55.0% |
| TAACCTCGAGAGGTTGCCCT+TGG | + | tig0016935:121071-121090 | None:intergenic | 55.0% | |
| !! | GCTGGTGGTGTTGCCATGTA+TGG | + | tig0016935:122363-122382 | None:intergenic | 55.0% |
| TAAGAGTGGGGAGGAGGGTA+TGG | + | tig0016935:122552-122571 | None:intergenic | 55.0% | |
| GAGGATAAGAGTGGGGAGGA+GGG | + | tig0016935:122557-122576 | None:intergenic | 55.0% | |
| GATGGAGGATAAGAGTGGGG+AGG | + | tig0016935:122561-122580 | None:intergenic | 55.0% | |
| GGTGGATAGGCTGAAGATGG+AGG | + | tig0016935:122576-122595 | None:intergenic | 55.0% | |
| !! | GGTGGTGGATAGGCTGAAGA+TGG | + | tig0016935:122579-122598 | None:intergenic | 55.0% |
| GAGGATAACCTGGAGGTGGA+GGG | + | tig0016935:122608-122627 | None:intergenic | 55.0% | |
| GCGTTTGGAGGATAACCTGG+AGG | + | tig0016935:122615-122634 | None:intergenic | 55.0% | |
| CCAGCGTTTGGAGGATAACC+TGG | + | tig0016935:122618-122637 | None:intergenic | 55.0% | |
| CCAGGTTATCCTCCAAACGC+TGG | - | tig0016935:122615-122634 | Msa1360110:intron | 55.0% | |
| CACAGTACTCAGTATGGCGG+AGG | + | tig0016935:122743-122762 | None:intergenic | 55.0% | |
| TGTCTAGCGGAACGATAGCG+GGG | - | tig0016935:121043-121062 | Msa1360110:three_prime_UTR | 55.0% | |
| !! | GAACGATAGCGGGGATCCAA+GGG | - | tig0016935:121052-121071 | Msa1360110:three_prime_UTR | 55.0% |
| TAACCTCGAGAGGTTGCCCT+TGG | + | tig0016935:121071-121090 | None:intergenic | 55.0% | |
| !! | GCTGGTGGTGTTGCCATGTA+TGG | + | tig0016935:122363-122382 | None:intergenic | 55.0% |
| TAAGAGTGGGGAGGAGGGTA+TGG | + | tig0016935:122552-122571 | None:intergenic | 55.0% | |
| GAGGATAAGAGTGGGGAGGA+GGG | + | tig0016935:122557-122576 | None:intergenic | 55.0% | |
| GATGGAGGATAAGAGTGGGG+AGG | + | tig0016935:122561-122580 | None:intergenic | 55.0% | |
| GGTGGATAGGCTGAAGATGG+AGG | + | tig0016935:122576-122595 | None:intergenic | 55.0% | |
| !! | GGTGGTGGATAGGCTGAAGA+TGG | + | tig0016935:122579-122598 | None:intergenic | 55.0% |
| GAGGATAACCTGGAGGTGGA+GGG | + | tig0016935:122608-122627 | None:intergenic | 55.0% | |
| GCGTTTGGAGGATAACCTGG+AGG | + | tig0016935:122615-122634 | None:intergenic | 55.0% | |
| CCAGCGTTTGGAGGATAACC+TGG | + | tig0016935:122618-122637 | None:intergenic | 55.0% | |
| CCAGGTTATCCTCCAAACGC+TGG | - | tig0016935:122615-122634 | Msa1360110:intron | 55.0% | |
| CACAGTACTCAGTATGGCGG+AGG | + | tig0016935:122743-122762 | None:intergenic | 55.0% | |
| !! | GGAACGATAGCGGGGATCCA+AGG | - | tig0016935:121051-121070 | Msa1360110:three_prime_UTR | 60.0% |
| GATCCAAGGGCAACCTCTCG+AGG | - | tig0016935:121065-121084 | Msa1360110:three_prime_UTR | 60.0% | |
| GGGCAACCTCTCGAGGTTAC+TGG | - | tig0016935:121072-121091 | Msa1360110:three_prime_UTR | 60.0% | |
| TGTCTGGTTGGCAGACACGC+AGG | - | tig0016935:122162-122181 | Msa1360110:intron | 60.0% | |
| GTATGGCTTGAGGAGGAGCC+TGG | + | tig0016935:122339-122358 | None:intergenic | 60.0% | |
| ! | GCAGCAGCAGCAGGTATTGC+TGG | + | tig0016935:122450-122469 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGATAGGGTGA+TGG | + | tig0016935:122525-122544 | None:intergenic | 60.0% |
| !! | GGCGATGGTGGTGGTGGATA+GGG | + | tig0016935:122531-122550 | None:intergenic | 60.0% |
| !! | TGGCGATGGTGGTGGTGGAT+AGG | + | tig0016935:122532-122551 | None:intergenic | 60.0% |
| GGAGGATAAGAGTGGGGAGG+AGG | + | tig0016935:122558-122577 | None:intergenic | 60.0% | |
| ! | GGTGGAGGGTATGAAGGTGG+TGG | + | tig0016935:122594-122613 | None:intergenic | 60.0% |
| ! | GGAGGTGGAGGGTATGAAGG+TGG | + | tig0016935:122597-122616 | None:intergenic | 60.0% |
| ! | CCTGGAGGTGGAGGGTATGA+AGG | + | tig0016935:122600-122619 | None:intergenic | 60.0% |
| CCTTCATACCCTCCACCTCC+AGG | - | tig0016935:122597-122616 | Msa1360110:intron | 60.0% | |
| GGAGGATAACCTGGAGGTGG+AGG | + | tig0016935:122609-122628 | None:intergenic | 60.0% | |
| !! | GGAACGATAGCGGGGATCCA+AGG | - | tig0016935:121051-121070 | Msa1360110:three_prime_UTR | 60.0% |
| GATCCAAGGGCAACCTCTCG+AGG | - | tig0016935:121065-121084 | Msa1360110:three_prime_UTR | 60.0% | |
| GGGCAACCTCTCGAGGTTAC+TGG | - | tig0016935:121072-121091 | Msa1360110:three_prime_UTR | 60.0% | |
| TGTCTGGTTGGCAGACACGC+AGG | - | tig0016935:122162-122181 | Msa1360110:intron | 60.0% | |
| GTATGGCTTGAGGAGGAGCC+TGG | + | tig0016935:122339-122358 | None:intergenic | 60.0% | |
| ! | GCAGCAGCAGCAGGTATTGC+TGG | + | tig0016935:122450-122469 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGATAGGGTGA+TGG | + | tig0016935:122525-122544 | None:intergenic | 60.0% |
| !! | GGCGATGGTGGTGGTGGATA+GGG | + | tig0016935:122531-122550 | None:intergenic | 60.0% |
| !! | TGGCGATGGTGGTGGTGGAT+AGG | + | tig0016935:122532-122551 | None:intergenic | 60.0% |
| GGAGGATAAGAGTGGGGAGG+AGG | + | tig0016935:122558-122577 | None:intergenic | 60.0% | |
| ! | GGTGGAGGGTATGAAGGTGG+TGG | + | tig0016935:122594-122613 | None:intergenic | 60.0% |
| ! | GGAGGTGGAGGGTATGAAGG+TGG | + | tig0016935:122597-122616 | None:intergenic | 60.0% |
| ! | CCTGGAGGTGGAGGGTATGA+AGG | + | tig0016935:122600-122619 | None:intergenic | 60.0% |
| CCTTCATACCCTCCACCTCC+AGG | - | tig0016935:122597-122616 | Msa1360110:intron | 60.0% | |
| GGAGGATAACCTGGAGGTGG+AGG | + | tig0016935:122609-122628 | None:intergenic | 60.0% | |
| !! | GGGTATGGCGATGGTGGTGG+TGG | + | tig0016935:122537-122556 | None:intergenic | 65.0% |
| ! | GGAGGGTATGGCGATGGTGG+TGG | + | tig0016935:122540-122559 | None:intergenic | 65.0% |
| ! | GGAGGAGGGTATGGCGATGG+TGG | + | tig0016935:122543-122562 | None:intergenic | 65.0% |
| ! | TGGGGAGGAGGGTATGGCGA+TGG | + | tig0016935:122546-122565 | None:intergenic | 65.0% |
| !! | GGGTATGGCGATGGTGGTGG+TGG | + | tig0016935:122537-122556 | None:intergenic | 65.0% |
| ! | GGAGGGTATGGCGATGGTGG+TGG | + | tig0016935:122540-122559 | None:intergenic | 65.0% |
| ! | GGAGGAGGGTATGGCGATGG+TGG | + | tig0016935:122543-122562 | None:intergenic | 65.0% |
| ! | TGGGGAGGAGGGTATGGCGA+TGG | + | tig0016935:122546-122565 | None:intergenic | 65.0% |
| GCAGCAGCAGCAGCAGCAGC+AGG | + | tig0016935:122459-122478 | None:intergenic | 70.0% | |
| GCAGCAGCAGCAGCAGCAGC+AGG | + | tig0016935:122459-122478 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016935 | gene | 120984 | 122925 | 120984 | ID=Msa1360110;Name=Msa1360110 |
| tig0016935 | mRNA | 120984 | 122925 | 120984 | ID=Msa1360110-mRNA-1;Parent=Msa1360110;Name=Msa1360110-mRNA-1;_AED=0.13;_eAED=0.13;_QI=55|1|0.85|1|0.83|0.85|7|171|247 |
| tig0016935 | exon | 120984 | 121177 | 120984 | ID=Msa1360110-mRNA-1:exon:11754;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 121273 | 121576 | 121273 | ID=Msa1360110-mRNA-1:exon:11753;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 121676 | 121733 | 121676 | ID=Msa1360110-mRNA-1:exon:11752;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 122277 | 122348 | 122277 | ID=Msa1360110-mRNA-1:exon:11751;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 122433 | 122559 | 122433 | ID=Msa1360110-mRNA-1:exon:11750;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 122624 | 122728 | 122624 | ID=Msa1360110-mRNA-1:exon:11749;Parent=Msa1360110-mRNA-1 |
| tig0016935 | exon | 122816 | 122925 | 122816 | ID=Msa1360110-mRNA-1:exon:11748;Parent=Msa1360110-mRNA-1 |
| tig0016935 | five_prime_UTR | 122871 | 122925 | 122871 | ID=Msa1360110-mRNA-1:five_prime_utr;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 122816 | 122870 | 122816 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 122624 | 122728 | 122624 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 122433 | 122559 | 122433 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 122277 | 122348 | 122277 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 121676 | 121733 | 121676 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 121273 | 121576 | 121273 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | CDS | 121155 | 121177 | 121155 | ID=Msa1360110-mRNA-1:cds;Parent=Msa1360110-mRNA-1 |
| tig0016935 | three_prime_UTR | 120984 | 121154 | 120984 | ID=Msa1360110-mRNA-1:three_prime_utr;Parent=Msa1360110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
