Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983050 | XP_013453283.1 | 95.951 | 247 | 8 | 2 | 1 | 245 | 1 | 247 | 8.83e-166 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983050 | B7FIF5 | 95.951 | 247 | 8 | 2 | 1 | 245 | 1 | 247 | 4.22e-166 | 468 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030800 | Msa0983050 | 0.805457 | 1.322512e-49 | -8.615850e-47 |
| Msa0078210 | Msa0983050 | 0.802513 | 5.413162e-49 | -8.615850e-47 |
| Msa0832350 | Msa0983050 | 0.827177 | 1.806940e-54 | -8.615850e-47 |
| Msa0983050 | Msa1137750 | 0.800343 | 1.506740e-48 | -8.615850e-47 |
| Msa0983050 | Msa1360110 | 0.915209 | 7.723501e-85 | -8.615850e-47 |
| Msa0983050 | Msa1438160 | 0.805739 | 1.154297e-49 | -8.615850e-47 |
| Msa0267900 | Msa0983050 | 0.810005 | 1.429176e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983050 | MtrunA17_Chr5g0393481 | 95.951 | 247 | 8 | 2 | 1 | 245 | 1 | 247 | 8.12e-170 | 468 |
| Msa0983050 | MtrunA17_Chr5g0393541 | 78.095 | 210 | 37 | 4 | 7 | 211 | 3 | 208 | 3.74e-110 | 318 |
| Msa0983050 | MtrunA17_Chr5g0435251 | 29.524 | 105 | 70 | 2 | 15 | 115 | 6 | 110 | 4.95e-12 | 62.0 |
| Msa0983050 | MtrunA17_Chr8g0350031 | 27.966 | 118 | 83 | 2 | 15 | 131 | 6 | 122 | 6.25e-12 | 61.6 |
| Msa0983050 | MtrunA17_Chr8g0350021 | 27.119 | 118 | 84 | 2 | 15 | 131 | 6 | 122 | 6.64e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983050 | AT4G34150.1 | 53.922 | 204 | 68 | 4 | 7 | 205 | 4 | 186 | 9.26e-69 | 212 |
Find 84 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGCAGCAGCAGGTATTGC+TGG | 0.282116 | 6_4:-24731022 | None:intergenic |
| CTTTGCCCAGATTTCTGCCT+TGG | 0.304687 | 6_4:+24731395 | Msa0983050:three_prime_UTR |
| GCTAGACATCATCGTTTCTA+AGG | 0.314275 | 6_4:-24729632 | None:intergenic |
| GGAGGGTATGGCGATGGTGG+TGG | 0.323657 | 6_4:-24731106 | None:intergenic |
| TCTCACGAAGGCCTTCAATA+AGG | 0.328098 | 6_4:-24729994 | None:intergenic |
| AAGAATTACTTACCAGCGTT+TGG | 0.337334 | 6_4:-24731196 | None:intergenic |
| GGAGGATAAGAGTGGGGAGG+AGG | 0.339930 | 6_4:-24731124 | None:intergenic |
| GTACGTACCTGTGCACGTTT+TGG | 0.367969 | 6_4:-24729872 | None:intergenic |
| GGGTATGGCGATGGTGGTGG+TGG | 0.369992 | 6_4:-24731103 | None:intergenic |
| AATGCTCCAAGGCAGAAATC+TGG | 0.371519 | 6_4:-24731401 | None:intergenic |
| TAAGAGTGGGGAGGAGGGTA+TGG | 0.395418 | 6_4:-24731118 | None:intergenic |
| GGAGGAGGGTATGGCGATGG+TGG | 0.395565 | 6_4:-24731109 | None:intergenic |
| TATGGCGATGGTGGTGGTGG+TGG | 0.397662 | 6_4:-24731100 | None:intergenic |
| GCCGGTGGTGTTGCCATGTA+TGG | 0.397761 | 6_4:-24730935 | None:intergenic |
| GTGTTGCCATGTATGGAGTA+TGG | 0.408909 | 6_4:-24730928 | None:intergenic |
| CTCACGAAGGCCTTCAATAA+GGG | 0.423667 | 6_4:-24729993 | None:intergenic |
| CTGAAGATGGAGGATAAGAG+TGG | 0.442433 | 6_4:-24731132 | None:intergenic |
| GTGAGATCAATGTTGCTGTT+TGG | 0.443748 | 6_4:+24730011 | Msa0983050:CDS |
| GAGGATAAGAGTGGGGAGGA+GGG | 0.450283 | 6_4:-24731123 | None:intergenic |
| GATGGATTGTGTGAAGCAAC+AGG | 0.451681 | 6_4:-24731070 | None:intergenic |
| GGAGGATAACCTGGAGGTGG+AGG | 0.455430 | 6_4:-24731175 | None:intergenic |
| CCAGCGTTTGGAGGATAACC+TGG | 0.457048 | 6_4:-24731184 | None:intergenic |
| GGGGATCCAAGGGCAACCTC+TGG | 0.458398 | 6_4:+24729666 | Msa0983050:CDS |
| CCTGGAGGTGGAGGGTATGA+AGG | 0.459154 | 6_4:-24731166 | None:intergenic |
| TGAAGATGGAGGATAAGAGT+GGG | 0.462321 | 6_4:-24731131 | None:intergenic |
| ACTTGTTGGTGGCGTATTCA+AGG | 0.471023 | 6_4:-24729843 | None:intergenic |
| GTATGGCTTGAGGAGGAGCC+TGG | 0.472095 | 6_4:-24730911 | None:intergenic |
| TTGCACAAGGTTCTCTCTCA+AGG | 0.481086 | 6_4:+24730157 | Msa0983050:CDS |
| AATTAGAGTGTGGTTGTTGT+GGG | 0.481190 | 6_4:-24730991 | None:intergenic |
| AGGGTATGAAGGTGGTGGAT+AGG | 0.481584 | 6_4:-24731155 | None:intergenic |
| TAATGTCACAGTACTCAGTA+TGG | 0.487423 | 6_4:-24731315 | None:intergenic |
| GGTGGTGGTGGATAGGGTGA+TGG | 0.489017 | 6_4:-24731088 | None:intergenic |
| GGAACGATAGCGGGGATCCA+AGG | 0.490479 | 6_4:+24729655 | Msa0983050:CDS |
| TAATTAGAGTGTGGTTGTTG+TGG | 0.492816 | 6_4:-24730992 | None:intergenic |
| TGGGGAGGAGGGTATGGCGA+TGG | 0.501516 | 6_4:-24731112 | None:intergenic |
| GGTGGTGGATAGGCTGAAGA+TGG | 0.504457 | 6_4:-24731145 | None:intergenic |
| CGAAATTGAAGGACACAGAA+TGG | 0.506439 | 6_4:+24729794 | Msa0983050:CDS |
| ATGCTCCAAGGCAGAAATCT+GGG | 0.506646 | 6_4:-24731400 | None:intergenic |
| CTCAAGCCATACTCCATACA+TGG | 0.508335 | 6_4:+24730922 | Msa0983050:CDS |
| CCTTCATACCCTCCACCTCC+AGG | 0.523848 | 6_4:+24731166 | Msa0983050:CDS |
| GTGTGGTTGTTGTGGGTAGT+AGG | 0.528734 | 6_4:-24730984 | None:intergenic |
| AATTACTTACCAGCGTTTGG+AGG | 0.530399 | 6_4:-24731193 | None:intergenic |
| TGTGAAGCAACAGGGTAAGA+TGG | 0.531401 | 6_4:-24731061 | None:intergenic |
| TTCCGAACCAAAACGTGCAC+AGG | 0.538149 | 6_4:+24729865 | Msa0983050:CDS |
| TAACCTCCAGAGGTTGCCCT+TGG | 0.538413 | 6_4:-24729672 | None:intergenic |
| GCGTATTCAAGGCAAACATA+AGG | 0.547821 | 6_4:-24729832 | None:intergenic |
| GGTGGAGGGTATGAAGGTGG+TGG | 0.549199 | 6_4:-24731160 | None:intergenic |
| TTTGGTTCGGAACTTGTTGG+TGG | 0.550891 | 6_4:-24729854 | None:intergenic |
| GAACGATAGCGGGGATCCAA+GGG | 0.561392 | 6_4:+24729656 | Msa0983050:CDS |
| GATCCAAGGGCAACCTCTGG+AGG | 0.565010 | 6_4:+24729669 | Msa0983050:CDS |
| ACGTACCTGGTGATTCACTT+TGG | 0.569600 | 6_4:-24730792 | None:intergenic |
| CATTAGGGTTCAATTGCACA+AGG | 0.570787 | 6_4:+24730144 | Msa0983050:intron |
| TCCATACATGGCAACACCAC+CGG | 0.574564 | 6_4:+24730934 | Msa0983050:CDS |
| GGTGGATAGGCTGAAGATGG+AGG | 0.577125 | 6_4:-24731142 | None:intergenic |
| TGATTATATGACGAGACTGC+CGG | 0.578563 | 6_4:-24730953 | None:intergenic |
| ATAAGCAAGACACGTTGTTG+TGG | 0.580442 | 6_4:+24729582 | None:intergenic |
| CAACGAAAGCGAAAGCATGA+TGG | 0.580744 | 6_4:-24731354 | None:intergenic |
| TTTGGAGGATAACCTGGAGG+TGG | 0.580887 | 6_4:-24731178 | None:intergenic |
| CACAGTACTCAGTATGGCGG+AGG | 0.583962 | 6_4:-24731309 | None:intergenic |
| TGCTTACCAGTAACCTCCAG+AGG | 0.586431 | 6_4:-24729682 | None:intergenic |
| TGTGTGTTGCTCGAAATTGA+AGG | 0.591480 | 6_4:+24729783 | Msa0983050:CDS |
| GATGGAGGATAAGAGTGGGG+AGG | 0.596813 | 6_4:-24731127 | None:intergenic |
| GCAACAGGGTAAGATGGTAG+TGG | 0.600028 | 6_4:-24731055 | None:intergenic |
| GAGGATAACCTGGAGGTGGA+GGG | 0.601472 | 6_4:-24731174 | None:intergenic |
| GAAGATGGAGGATAAGAGTG+GGG | 0.611331 | 6_4:-24731130 | None:intergenic |
| ACAGGGTAAGATGGTAGTGG+TGG | 0.617269 | 6_4:-24731052 | None:intergenic |
| GGTAATATATTGCAGAAACC+AGG | 0.624486 | 6_4:+24730893 | Msa0983050:intron |
| AAACTTAGACAAATGCTCCA+AGG | 0.629387 | 6_4:-24731412 | None:intergenic |
| GATGTCTAGCGGAACGATAG+CGG | 0.631709 | 6_4:+24729645 | Msa0983050:CDS |
| GGAGGTGGAGGGTATGAAGG+TGG | 0.632925 | 6_4:-24731163 | None:intergenic |
| CCAGGTTATCCTCCAAACGC+TGG | 0.646205 | 6_4:+24731184 | Msa0983050:CDS |
| TGTCTGGTTGGCAGACACGC+AGG | 0.665089 | 6_4:+24730737 | Msa0983050:intron |
| TGTCTAGCGGAACGATAGCG+GGG | 0.665238 | 6_4:+24729647 | Msa0983050:CDS |
| GTATGGAGTATGGCTTGAGG+AGG | 0.667986 | 6_4:-24730918 | None:intergenic |
| GGTTGTTGTGGGTAGTAGGA+CGG | 0.678586 | 6_4:-24730980 | None:intergenic |
| TAATGCCAAAGTGAATCACC+AGG | 0.688532 | 6_4:+24730787 | Msa0983050:CDS |
| GGATTGTGATAATTAGAGTG+TGG | 0.688865 | 6_4:-24731001 | None:intergenic |
| GGTGCCGATAAAATCATCAG+AGG | 0.696455 | 6_4:-24730050 | None:intergenic |
| TTAGAAACGATGATGTCTAG+CGG | 0.703905 | 6_4:+24729634 | Msa0983050:exon |
| TGTCACAGTACTCAGTATGG+CGG | 0.715217 | 6_4:-24731312 | None:intergenic |
| ATGGATTGTGTGAAGCAACA+GGG | 0.718917 | 6_4:-24731069 | None:intergenic |
| CAGCAACATTGATCTCACGA+AGG | 0.744037 | 6_4:-24730006 | None:intergenic |
| CATGTATGGAGTATGGCTTG+AGG | 0.747281 | 6_4:-24730921 | None:intergenic |
| GCGTTTGGAGGATAACCTGG+AGG | 0.754328 | 6_4:-24731181 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATAAGCA+AGG | + | chr6_4:24730572-24730591 | Msa0983050:intron | 10.0% |
| !! | AAATAAATATTGATGTAAAT+AGG | - | chr6_4:24730820-24730839 | None:intergenic | 10.0% |
| !! | TATATATATATATATAAGCA+AGG | + | chr6_4:24730572-24730591 | Msa0983050:intron | 10.0% |
| !! | AAATAAATATTGATGTAAAT+AGG | - | chr6_4:24730820-24730839 | None:intergenic | 10.0% |
| !!! | TTTTACTCATTCATTTATTT+AGG | + | chr6_4:24730244-24730263 | Msa0983050:intron | 15.0% |
| !! | TTACATATAATATATATGTG+AGG | - | chr6_4:24730378-24730397 | None:intergenic | 15.0% |
| !!! | AAAAACCATTTTTAATTTGT+TGG | + | chr6_4:24731452-24731471 | Msa0983050:three_prime_UTR | 15.0% |
| !!! | TTTTACTCATTCATTTATTT+AGG | + | chr6_4:24730244-24730263 | Msa0983050:intron | 15.0% |
| !! | TTACATATAATATATATGTG+AGG | - | chr6_4:24730378-24730397 | None:intergenic | 15.0% |
| !!! | AAAAACCATTTTTAATTTGT+TGG | + | chr6_4:24731452-24731471 | Msa0983050:three_prime_UTR | 15.0% |
| !!! | TTATATCATTCATCTTTTCT+AGG | - | chr6_4:24730409-24730428 | None:intergenic | 20.0% |
| !! | TGATATAAAAAATGTGAGAT+AGG | + | chr6_4:24730421-24730440 | Msa0983050:intron | 20.0% |
| !!! | CAAGAGACAATTTTATTTTA+TGG | - | chr6_4:24730448-24730467 | None:intergenic | 20.0% |
| !! | ATTTACATACATGTAATGTA+AGG | + | chr6_4:24730836-24730855 | Msa0983050:intron | 20.0% |
| !!! | TTATATCATTCATCTTTTCT+AGG | - | chr6_4:24730409-24730428 | None:intergenic | 20.0% |
| !! | TGATATAAAAAATGTGAGAT+AGG | + | chr6_4:24730421-24730440 | Msa0983050:intron | 20.0% |
| !!! | CAAGAGACAATTTTATTTTA+TGG | - | chr6_4:24730448-24730467 | None:intergenic | 20.0% |
| !! | ATTTACATACATGTAATGTA+AGG | + | chr6_4:24730836-24730855 | Msa0983050:intron | 20.0% |
| ! | AAATAATAGTACGTACTTTC+CGG | - | chr6_4:24730074-24730093 | None:intergenic | 25.0% |
| ! | TAATATCATTCTCCTTCATT+AGG | + | chr6_4:24730128-24730147 | Msa0983050:intron | 25.0% |
| ! | AATATCATTCTCCTTCATTA+GGG | + | chr6_4:24730129-24730148 | Msa0983050:intron | 25.0% |
| ! | TGAATGAGTAAAATAACATG+AGG | - | chr6_4:24730237-24730256 | None:intergenic | 25.0% |
| ! | ATTTGTGTATTGTGAATTTC+CGG | + | chr6_4:24730622-24730641 | Msa0983050:intron | 25.0% |
| ! | CAAAACTTGAACAATAGTAT+CGG | - | chr6_4:24730666-24730685 | None:intergenic | 25.0% |
| ! | ATTAATAAGTGTGTTTGTGA+TGG | + | chr6_4:24730872-24730891 | Msa0983050:intron | 25.0% |
| ! | TTTCTTTCTTTCTTTCTTTC+AGG | + | chr6_4:24731271-24731290 | Msa0983050:intron | 25.0% |
| ! | TCATGCCAACAAATTAAAAA+TGG | - | chr6_4:24731460-24731479 | None:intergenic | 25.0% |
| ! | AAATAATAGTACGTACTTTC+CGG | - | chr6_4:24730074-24730093 | None:intergenic | 25.0% |
| ! | TAATATCATTCTCCTTCATT+AGG | + | chr6_4:24730128-24730147 | Msa0983050:intron | 25.0% |
| ! | AATATCATTCTCCTTCATTA+GGG | + | chr6_4:24730129-24730148 | Msa0983050:intron | 25.0% |
| ! | TGAATGAGTAAAATAACATG+AGG | - | chr6_4:24730237-24730256 | None:intergenic | 25.0% |
| ! | ATTTGTGTATTGTGAATTTC+CGG | + | chr6_4:24730622-24730641 | Msa0983050:intron | 25.0% |
| ! | CAAAACTTGAACAATAGTAT+CGG | - | chr6_4:24730666-24730685 | None:intergenic | 25.0% |
| ! | ATTAATAAGTGTGTTTGTGA+TGG | + | chr6_4:24730872-24730891 | Msa0983050:intron | 25.0% |
| ! | TTTCTTTCTTTCTTTCTTTC+AGG | + | chr6_4:24731271-24731290 | Msa0983050:intron | 25.0% |
| ! | TCATGCCAACAAATTAAAAA+TGG | - | chr6_4:24731460-24731479 | None:intergenic | 25.0% |
| ! | GACATGATGATAATGATGAA+TGG | + | chr6_4:24729738-24729757 | Msa0983050:intron | 30.0% |
| ACAACTGCAAATCAAATCAA+AGG | - | chr6_4:24729766-24729785 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGACTCCTTCAATT+TGG | + | chr6_4:24729922-24729941 | Msa0983050:intron | 30.0% |
| !! | AGTAGTACTGATACAGATTT+GGG | - | chr6_4:24730276-24730295 | None:intergenic | 30.0% |
| !! | TAGTAGTACTGATACAGATT+TGG | - | chr6_4:24730277-24730296 | None:intergenic | 30.0% |
| CATACATGTAATGTAAGGAT+TGG | + | chr6_4:24730841-24730860 | Msa0983050:intron | 30.0% | |
| GAGATGAAAATTGAAATGGT+TGG | - | chr6_4:24731231-24731250 | None:intergenic | 30.0% | |
| GCAAGAGATGAAAATTGAAA+TGG | - | chr6_4:24731235-24731254 | None:intergenic | 30.0% | |
| ! | GACATGATGATAATGATGAA+TGG | + | chr6_4:24729738-24729757 | Msa0983050:intron | 30.0% |
| ACAACTGCAAATCAAATCAA+AGG | - | chr6_4:24729766-24729785 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGACTCCTTCAATT+TGG | + | chr6_4:24729922-24729941 | Msa0983050:intron | 30.0% |
| !! | AGTAGTACTGATACAGATTT+GGG | - | chr6_4:24730276-24730295 | None:intergenic | 30.0% |
| !! | TAGTAGTACTGATACAGATT+TGG | - | chr6_4:24730277-24730296 | None:intergenic | 30.0% |
| CATACATGTAATGTAAGGAT+TGG | + | chr6_4:24730841-24730860 | Msa0983050:intron | 30.0% | |
| GAGATGAAAATTGAAATGGT+TGG | - | chr6_4:24731231-24731250 | None:intergenic | 30.0% | |
| GCAAGAGATGAAAATTGAAA+TGG | - | chr6_4:24731235-24731254 | None:intergenic | 30.0% | |
| TTAGAAACGATGATGTCTAG+CGG | + | chr6_4:24729634-24729653 | Msa0983050:exon | 35.0% | |
| AGGAGTCAACAAAAAGTCAA+GGG | - | chr6_4:24729916-24729935 | None:intergenic | 35.0% | |
| AAGGAGTCAACAAAAAGTCA+AGG | - | chr6_4:24729917-24729936 | None:intergenic | 35.0% | |
| TCCTTCAATTTGGATTCAGA+TGG | + | chr6_4:24729932-24729951 | Msa0983050:intron | 35.0% | |
| ACCATCTGAATCCAAATTGA+AGG | - | chr6_4:24729936-24729955 | None:intergenic | 35.0% | |
| TTCAATTTGGATTCAGATGG+TGG | + | chr6_4:24729935-24729954 | Msa0983050:intron | 35.0% | |
| CGAACTTCTCTTGAAAAACA+GGG | - | chr6_4:24729967-24729986 | None:intergenic | 35.0% | |
| ACGAACTTCTCTTGAAAAAC+AGG | - | chr6_4:24729968-24729987 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTTCCCTTATTGA+AGG | + | chr6_4:24729983-24730002 | Msa0983050:CDS | 35.0% |
| ! | GTCACCTCTGATGATTTTAT+CGG | + | chr6_4:24730046-24730065 | Msa0983050:CDS | 35.0% |
| TGGCCACTTCAAACTAAAAA+TGG | + | chr6_4:24730196-24730215 | Msa0983050:CDS | 35.0% | |
| !!! | CTGCCATTTTTAGTTTGAAG+TGG | - | chr6_4:24730202-24730221 | None:intergenic | 35.0% |
| CACTTCAAACTAAAAATGGC+AGG | + | chr6_4:24730200-24730219 | Msa0983050:CDS | 35.0% | |
| !! | TAATTTTGATGTGCGTGTGT+GGG | - | chr6_4:24730318-24730337 | None:intergenic | 35.0% |
| !! | ATAATTTTGATGTGCGTGTG+TGG | - | chr6_4:24730319-24730338 | None:intergenic | 35.0% |
| GAGAATCTATCTATGAAAGC+CGG | - | chr6_4:24730644-24730663 | None:intergenic | 35.0% | |
| ATGTAAATAGGTTACGTACC+TGG | - | chr6_4:24730808-24730827 | None:intergenic | 35.0% | |
| GGTAATATATTGCAGAAACC+AGG | + | chr6_4:24730893-24730912 | Msa0983050:intron | 35.0% | |
| AATTAGAGTGTGGTTGTTGT+GGG | - | chr6_4:24730994-24731013 | None:intergenic | 35.0% | |
| TAATTAGAGTGTGGTTGTTG+TGG | - | chr6_4:24730995-24731014 | None:intergenic | 35.0% | |
| GGATTGTGATAATTAGAGTG+TGG | - | chr6_4:24731004-24731023 | None:intergenic | 35.0% | |
| AAGAATTACTTACCAGCGTT+TGG | - | chr6_4:24731199-24731218 | None:intergenic | 35.0% | |
| TAATGTCACAGTACTCAGTA+TGG | - | chr6_4:24731318-24731337 | None:intergenic | 35.0% | |
| AAACTTAGACAAATGCTCCA+AGG | - | chr6_4:24731415-24731434 | None:intergenic | 35.0% | |
| TTAGAAACGATGATGTCTAG+CGG | + | chr6_4:24729634-24729653 | Msa0983050:exon | 35.0% | |
| AGGAGTCAACAAAAAGTCAA+GGG | - | chr6_4:24729916-24729935 | None:intergenic | 35.0% | |
| AAGGAGTCAACAAAAAGTCA+AGG | - | chr6_4:24729917-24729936 | None:intergenic | 35.0% | |
| TCCTTCAATTTGGATTCAGA+TGG | + | chr6_4:24729932-24729951 | Msa0983050:intron | 35.0% | |
| ACCATCTGAATCCAAATTGA+AGG | - | chr6_4:24729936-24729955 | None:intergenic | 35.0% | |
| TTCAATTTGGATTCAGATGG+TGG | + | chr6_4:24729935-24729954 | Msa0983050:intron | 35.0% | |
| CGAACTTCTCTTGAAAAACA+GGG | - | chr6_4:24729967-24729986 | None:intergenic | 35.0% | |
| ACGAACTTCTCTTGAAAAAC+AGG | - | chr6_4:24729968-24729987 | None:intergenic | 35.0% | |
| ! | TTCGTGTTTTCCCTTATTGA+AGG | + | chr6_4:24729983-24730002 | Msa0983050:CDS | 35.0% |
| ! | GTCACCTCTGATGATTTTAT+CGG | + | chr6_4:24730046-24730065 | Msa0983050:CDS | 35.0% |
| TGGCCACTTCAAACTAAAAA+TGG | + | chr6_4:24730196-24730215 | Msa0983050:CDS | 35.0% | |
| !!! | CTGCCATTTTTAGTTTGAAG+TGG | - | chr6_4:24730202-24730221 | None:intergenic | 35.0% |
| CACTTCAAACTAAAAATGGC+AGG | + | chr6_4:24730200-24730219 | Msa0983050:CDS | 35.0% | |
| !! | TAATTTTGATGTGCGTGTGT+GGG | - | chr6_4:24730318-24730337 | None:intergenic | 35.0% |
| !! | ATAATTTTGATGTGCGTGTG+TGG | - | chr6_4:24730319-24730338 | None:intergenic | 35.0% |
| GAGAATCTATCTATGAAAGC+CGG | - | chr6_4:24730644-24730663 | None:intergenic | 35.0% | |
| ATGTAAATAGGTTACGTACC+TGG | - | chr6_4:24730808-24730827 | None:intergenic | 35.0% | |
| GGTAATATATTGCAGAAACC+AGG | + | chr6_4:24730893-24730912 | Msa0983050:intron | 35.0% | |
| AATTAGAGTGTGGTTGTTGT+GGG | - | chr6_4:24730994-24731013 | None:intergenic | 35.0% | |
| TAATTAGAGTGTGGTTGTTG+TGG | - | chr6_4:24730995-24731014 | None:intergenic | 35.0% | |
| GGATTGTGATAATTAGAGTG+TGG | - | chr6_4:24731004-24731023 | None:intergenic | 35.0% | |
| AAGAATTACTTACCAGCGTT+TGG | - | chr6_4:24731199-24731218 | None:intergenic | 35.0% | |
| TAATGTCACAGTACTCAGTA+TGG | - | chr6_4:24731318-24731337 | None:intergenic | 35.0% | |
| AAACTTAGACAAATGCTCCA+AGG | - | chr6_4:24731415-24731434 | None:intergenic | 35.0% | |
| GCTAGACATCATCGTTTCTA+AGG | - | chr6_4:24729635-24729654 | None:intergenic | 40.0% | |
| ! | TGTGTGTTGCTCGAAATTGA+AGG | + | chr6_4:24729783-24729802 | Msa0983050:CDS | 40.0% |
| CGAAATTGAAGGACACAGAA+TGG | + | chr6_4:24729794-24729813 | Msa0983050:CDS | 40.0% | |
| GCGTATTCAAGGCAAACATA+AGG | - | chr6_4:24729835-24729854 | None:intergenic | 40.0% | |
| ! | GTGAGATCAATGTTGCTGTT+TGG | + | chr6_4:24730011-24730030 | Msa0983050:CDS | 40.0% |
| ! | TCTGATGATTTTATCGGCAC+CGG | + | chr6_4:24730052-24730071 | Msa0983050:CDS | 40.0% |
| GTGCAATTGAACCCTAATGA+AGG | - | chr6_4:24730143-24730162 | None:intergenic | 40.0% | |
| CATTAGGGTTCAATTGCACA+AGG | + | chr6_4:24730144-24730163 | Msa0983050:intron | 40.0% | |
| !! | AAGGTTTTGATGACTCTGCA+TGG | + | chr6_4:24730176-24730195 | Msa0983050:CDS | 40.0% |
| GGGAAAAGATGCATTATGCA+TGG | - | chr6_4:24730711-24730730 | None:intergenic | 40.0% | |
| ! | ATCTTTTCCCTTTGTCTGTC+TGG | + | chr6_4:24730721-24730740 | Msa0983050:intron | 40.0% |
| TAATGCCAAAGTGAATCACC+AGG | + | chr6_4:24730787-24730806 | Msa0983050:CDS | 40.0% | |
| TGATTATATGACGAGACTGC+CGG | - | chr6_4:24730956-24730975 | None:intergenic | 40.0% | |
| ! | ATGGATTGTGTGAAGCAACA+GGG | - | chr6_4:24731072-24731091 | None:intergenic | 40.0% |
| TGAAGATGGAGGATAAGAGT+GGG | - | chr6_4:24731134-24731153 | None:intergenic | 40.0% | |
| AATTACTTACCAGCGTTTGG+AGG | - | chr6_4:24731196-24731215 | None:intergenic | 40.0% | |
| GCTAGACATCATCGTTTCTA+AGG | - | chr6_4:24729635-24729654 | None:intergenic | 40.0% | |
| ! | TGTGTGTTGCTCGAAATTGA+AGG | + | chr6_4:24729783-24729802 | Msa0983050:CDS | 40.0% |
| CGAAATTGAAGGACACAGAA+TGG | + | chr6_4:24729794-24729813 | Msa0983050:CDS | 40.0% | |
| GCGTATTCAAGGCAAACATA+AGG | - | chr6_4:24729835-24729854 | None:intergenic | 40.0% | |
| ! | GTGAGATCAATGTTGCTGTT+TGG | + | chr6_4:24730011-24730030 | Msa0983050:CDS | 40.0% |
| ! | TCTGATGATTTTATCGGCAC+CGG | + | chr6_4:24730052-24730071 | Msa0983050:CDS | 40.0% |
| GTGCAATTGAACCCTAATGA+AGG | - | chr6_4:24730143-24730162 | None:intergenic | 40.0% | |
| CATTAGGGTTCAATTGCACA+AGG | + | chr6_4:24730144-24730163 | Msa0983050:intron | 40.0% | |
| !! | AAGGTTTTGATGACTCTGCA+TGG | + | chr6_4:24730176-24730195 | Msa0983050:CDS | 40.0% |
| GGGAAAAGATGCATTATGCA+TGG | - | chr6_4:24730711-24730730 | None:intergenic | 40.0% | |
| ! | ATCTTTTCCCTTTGTCTGTC+TGG | + | chr6_4:24730721-24730740 | Msa0983050:intron | 40.0% |
| TAATGCCAAAGTGAATCACC+AGG | + | chr6_4:24730787-24730806 | Msa0983050:CDS | 40.0% | |
| TGATTATATGACGAGACTGC+CGG | - | chr6_4:24730956-24730975 | None:intergenic | 40.0% | |
| ! | ATGGATTGTGTGAAGCAACA+GGG | - | chr6_4:24731072-24731091 | None:intergenic | 40.0% |
| TGAAGATGGAGGATAAGAGT+GGG | - | chr6_4:24731134-24731153 | None:intergenic | 40.0% | |
| AATTACTTACCAGCGTTTGG+AGG | - | chr6_4:24731196-24731215 | None:intergenic | 40.0% | |
| !! | ACTTGTTGGTGGCGTATTCA+AGG | - | chr6_4:24729846-24729865 | None:intergenic | 45.0% |
| !! | TTTGGTTCGGAACTTGTTGG+TGG | - | chr6_4:24729857-24729876 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCGGAACTTGT+TGG | - | chr6_4:24729860-24729879 | None:intergenic | 45.0% |
| !!! | TACCTGTGCACGTTTTGGTT+CGG | - | chr6_4:24729870-24729889 | None:intergenic | 45.0% |
| CTCACGAAGGCCTTCAATAA+GGG | - | chr6_4:24729996-24730015 | None:intergenic | 45.0% | |
| TCTCACGAAGGCCTTCAATA+AGG | - | chr6_4:24729997-24730016 | None:intergenic | 45.0% | |
| CAGCAACATTGATCTCACGA+AGG | - | chr6_4:24730009-24730028 | None:intergenic | 45.0% | |
| !! | GGTGCCGATAAAATCATCAG+AGG | - | chr6_4:24730053-24730072 | None:intergenic | 45.0% |
| TTGCACAAGGTTCTCTCTCA+AGG | + | chr6_4:24730157-24730176 | Msa0983050:CDS | 45.0% | |
| TTTCCCTTTGTCTGTCTGGT+TGG | + | chr6_4:24730725-24730744 | Msa0983050:intron | 45.0% | |
| ACGTACCTGGTGATTCACTT+TGG | - | chr6_4:24730795-24730814 | None:intergenic | 45.0% | |
| CATGTATGGAGTATGGCTTG+AGG | - | chr6_4:24730924-24730943 | None:intergenic | 45.0% | |
| CTCAAGCCATACTCCATACA+TGG | + | chr6_4:24730922-24730941 | Msa0983050:CDS | 45.0% | |
| GTGTTGCCATGTATGGAGTA+TGG | - | chr6_4:24730931-24730950 | None:intergenic | 45.0% | |
| TGTGAAGCAACAGGGTAAGA+TGG | - | chr6_4:24731064-24731083 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGTGAAGCAAC+AGG | - | chr6_4:24731073-24731092 | None:intergenic | 45.0% |
| GAAGATGGAGGATAAGAGTG+GGG | - | chr6_4:24731133-24731152 | None:intergenic | 45.0% | |
| CTGAAGATGGAGGATAAGAG+TGG | - | chr6_4:24731135-24731154 | None:intergenic | 45.0% | |
| TGTCACAGTACTCAGTATGG+CGG | - | chr6_4:24731315-24731334 | None:intergenic | 45.0% | |
| ! | CAACGAAAGCGAAAGCATGA+TGG | - | chr6_4:24731357-24731376 | None:intergenic | 45.0% |
| ATGCTCCAAGGCAGAAATCT+GGG | - | chr6_4:24731403-24731422 | None:intergenic | 45.0% | |
| AATGCTCCAAGGCAGAAATC+TGG | - | chr6_4:24731404-24731423 | None:intergenic | 45.0% | |
| !! | ACTTGTTGGTGGCGTATTCA+AGG | - | chr6_4:24729846-24729865 | None:intergenic | 45.0% |
| !! | TTTGGTTCGGAACTTGTTGG+TGG | - | chr6_4:24729857-24729876 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCGGAACTTGT+TGG | - | chr6_4:24729860-24729879 | None:intergenic | 45.0% |
| !!! | TACCTGTGCACGTTTTGGTT+CGG | - | chr6_4:24729870-24729889 | None:intergenic | 45.0% |
| CTCACGAAGGCCTTCAATAA+GGG | - | chr6_4:24729996-24730015 | None:intergenic | 45.0% | |
| TCTCACGAAGGCCTTCAATA+AGG | - | chr6_4:24729997-24730016 | None:intergenic | 45.0% | |
| CAGCAACATTGATCTCACGA+AGG | - | chr6_4:24730009-24730028 | None:intergenic | 45.0% | |
| !! | GGTGCCGATAAAATCATCAG+AGG | - | chr6_4:24730053-24730072 | None:intergenic | 45.0% |
| TTGCACAAGGTTCTCTCTCA+AGG | + | chr6_4:24730157-24730176 | Msa0983050:CDS | 45.0% | |
| TTTCCCTTTGTCTGTCTGGT+TGG | + | chr6_4:24730725-24730744 | Msa0983050:intron | 45.0% | |
| ACGTACCTGGTGATTCACTT+TGG | - | chr6_4:24730795-24730814 | None:intergenic | 45.0% | |
| CATGTATGGAGTATGGCTTG+AGG | - | chr6_4:24730924-24730943 | None:intergenic | 45.0% | |
| CTCAAGCCATACTCCATACA+TGG | + | chr6_4:24730922-24730941 | Msa0983050:CDS | 45.0% | |
| GTGTTGCCATGTATGGAGTA+TGG | - | chr6_4:24730931-24730950 | None:intergenic | 45.0% | |
| TGTGAAGCAACAGGGTAAGA+TGG | - | chr6_4:24731064-24731083 | None:intergenic | 45.0% | |
| !! | GATGGATTGTGTGAAGCAAC+AGG | - | chr6_4:24731073-24731092 | None:intergenic | 45.0% |
| GAAGATGGAGGATAAGAGTG+GGG | - | chr6_4:24731133-24731152 | None:intergenic | 45.0% | |
| CTGAAGATGGAGGATAAGAG+TGG | - | chr6_4:24731135-24731154 | None:intergenic | 45.0% | |
| TGTCACAGTACTCAGTATGG+CGG | - | chr6_4:24731315-24731334 | None:intergenic | 45.0% | |
| ! | CAACGAAAGCGAAAGCATGA+TGG | - | chr6_4:24731357-24731376 | None:intergenic | 45.0% |
| ATGCTCCAAGGCAGAAATCT+GGG | - | chr6_4:24731403-24731422 | None:intergenic | 45.0% | |
| AATGCTCCAAGGCAGAAATC+TGG | - | chr6_4:24731404-24731423 | None:intergenic | 45.0% | |
| GATGTCTAGCGGAACGATAG+CGG | + | chr6_4:24729645-24729664 | Msa0983050:CDS | 50.0% | |
| ATGTCTAGCGGAACGATAGC+GGG | + | chr6_4:24729646-24729665 | Msa0983050:CDS | 50.0% | |
| TGCTTACCAGTAACCTCCAG+AGG | - | chr6_4:24729685-24729704 | None:intergenic | 50.0% | |
| TTCCGAACCAAAACGTGCAC+AGG | + | chr6_4:24729865-24729884 | Msa0983050:CDS | 50.0% | |
| ! | GTACGTACCTGTGCACGTTT+TGG | - | chr6_4:24729875-24729894 | None:intergenic | 50.0% |
| ACGTGCACAGGTACGTACTT+AGG | + | chr6_4:24729877-24729896 | Msa0983050:intron | 50.0% | |
| GTGTGTGGGATATGTAGTCG+CGG | - | chr6_4:24730304-24730323 | None:intergenic | 50.0% | |
| CTGCCAACCAGACAGACAAA+GGG | - | chr6_4:24730731-24730750 | None:intergenic | 50.0% | |
| TCTGCCAACCAGACAGACAA+AGG | - | chr6_4:24730732-24730751 | None:intergenic | 50.0% | |
| GTATGGAGTATGGCTTGAGG+AGG | - | chr6_4:24730921-24730940 | None:intergenic | 50.0% | |
| TCCATACATGGCAACACCAC+CGG | + | chr6_4:24730934-24730953 | Msa0983050:CDS | 50.0% | |
| TTATATGACGAGACTGCCGG+TGG | - | chr6_4:24730953-24730972 | None:intergenic | 50.0% | |
| GGTTGTTGTGGGTAGTAGGA+CGG | - | chr6_4:24730983-24731002 | None:intergenic | 50.0% | |
| GTGTGGTTGTTGTGGGTAGT+AGG | - | chr6_4:24730987-24731006 | None:intergenic | 50.0% | |
| !! | ACAGGGTAAGATGGTAGTGG+TGG | - | chr6_4:24731055-24731074 | None:intergenic | 50.0% |
| GCAACAGGGTAAGATGGTAG+TGG | - | chr6_4:24731058-24731077 | None:intergenic | 50.0% | |
| !! | AGGGTATGAAGGTGGTGGAT+AGG | - | chr6_4:24731158-24731177 | None:intergenic | 50.0% |
| TTTGGAGGATAACCTGGAGG+TGG | - | chr6_4:24731181-24731200 | None:intergenic | 50.0% | |
| CTTTGCCCAGATTTCTGCCT+TGG | + | chr6_4:24731395-24731414 | Msa0983050:three_prime_UTR | 50.0% | |
| GATGTCTAGCGGAACGATAG+CGG | + | chr6_4:24729645-24729664 | Msa0983050:CDS | 50.0% | |
| ATGTCTAGCGGAACGATAGC+GGG | + | chr6_4:24729646-24729665 | Msa0983050:CDS | 50.0% | |
| TGCTTACCAGTAACCTCCAG+AGG | - | chr6_4:24729685-24729704 | None:intergenic | 50.0% | |
| TTCCGAACCAAAACGTGCAC+AGG | + | chr6_4:24729865-24729884 | Msa0983050:CDS | 50.0% | |
| ! | GTACGTACCTGTGCACGTTT+TGG | - | chr6_4:24729875-24729894 | None:intergenic | 50.0% |
| ACGTGCACAGGTACGTACTT+AGG | + | chr6_4:24729877-24729896 | Msa0983050:intron | 50.0% | |
| GTGTGTGGGATATGTAGTCG+CGG | - | chr6_4:24730304-24730323 | None:intergenic | 50.0% | |
| CTGCCAACCAGACAGACAAA+GGG | - | chr6_4:24730731-24730750 | None:intergenic | 50.0% | |
| TCTGCCAACCAGACAGACAA+AGG | - | chr6_4:24730732-24730751 | None:intergenic | 50.0% | |
| GTATGGAGTATGGCTTGAGG+AGG | - | chr6_4:24730921-24730940 | None:intergenic | 50.0% | |
| TCCATACATGGCAACACCAC+CGG | + | chr6_4:24730934-24730953 | Msa0983050:CDS | 50.0% | |
| TTATATGACGAGACTGCCGG+TGG | - | chr6_4:24730953-24730972 | None:intergenic | 50.0% | |
| GGTTGTTGTGGGTAGTAGGA+CGG | - | chr6_4:24730983-24731002 | None:intergenic | 50.0% | |
| GTGTGGTTGTTGTGGGTAGT+AGG | - | chr6_4:24730987-24731006 | None:intergenic | 50.0% | |
| !! | ACAGGGTAAGATGGTAGTGG+TGG | - | chr6_4:24731055-24731074 | None:intergenic | 50.0% |
| GCAACAGGGTAAGATGGTAG+TGG | - | chr6_4:24731058-24731077 | None:intergenic | 50.0% | |
| !! | AGGGTATGAAGGTGGTGGAT+AGG | - | chr6_4:24731158-24731177 | None:intergenic | 50.0% |
| TTTGGAGGATAACCTGGAGG+TGG | - | chr6_4:24731181-24731200 | None:intergenic | 50.0% | |
| CTTTGCCCAGATTTCTGCCT+TGG | + | chr6_4:24731395-24731414 | Msa0983050:three_prime_UTR | 50.0% | |
| TGTCTAGCGGAACGATAGCG+GGG | + | chr6_4:24729647-24729666 | Msa0983050:CDS | 55.0% | |
| !! | GAACGATAGCGGGGATCCAA+GGG | + | chr6_4:24729656-24729675 | Msa0983050:CDS | 55.0% |
| TAACCTCCAGAGGTTGCCCT+TGG | - | chr6_4:24729675-24729694 | None:intergenic | 55.0% | |
| !! | GATGGTGGTGGTGGTGGATA+GGG | - | chr6_4:24731097-24731116 | None:intergenic | 55.0% |
| TAAGAGTGGGGAGGAGGGTA+TGG | - | chr6_4:24731121-24731140 | None:intergenic | 55.0% | |
| GAGGATAAGAGTGGGGAGGA+GGG | - | chr6_4:24731126-24731145 | None:intergenic | 55.0% | |
| GATGGAGGATAAGAGTGGGG+AGG | - | chr6_4:24731130-24731149 | None:intergenic | 55.0% | |
| GGTGGATAGGCTGAAGATGG+AGG | - | chr6_4:24731145-24731164 | None:intergenic | 55.0% | |
| !! | GGTGGTGGATAGGCTGAAGA+TGG | - | chr6_4:24731148-24731167 | None:intergenic | 55.0% |
| GAGGATAACCTGGAGGTGGA+GGG | - | chr6_4:24731177-24731196 | None:intergenic | 55.0% | |
| GCGTTTGGAGGATAACCTGG+AGG | - | chr6_4:24731184-24731203 | None:intergenic | 55.0% | |
| CCAGCGTTTGGAGGATAACC+TGG | - | chr6_4:24731187-24731206 | None:intergenic | 55.0% | |
| CCAGGTTATCCTCCAAACGC+TGG | + | chr6_4:24731184-24731203 | Msa0983050:CDS | 55.0% | |
| CACAGTACTCAGTATGGCGG+AGG | - | chr6_4:24731312-24731331 | None:intergenic | 55.0% | |
| TGTCTAGCGGAACGATAGCG+GGG | + | chr6_4:24729647-24729666 | Msa0983050:CDS | 55.0% | |
| !! | GAACGATAGCGGGGATCCAA+GGG | + | chr6_4:24729656-24729675 | Msa0983050:CDS | 55.0% |
| TAACCTCCAGAGGTTGCCCT+TGG | - | chr6_4:24729675-24729694 | None:intergenic | 55.0% | |
| !! | GATGGTGGTGGTGGTGGATA+GGG | - | chr6_4:24731097-24731116 | None:intergenic | 55.0% |
| TAAGAGTGGGGAGGAGGGTA+TGG | - | chr6_4:24731121-24731140 | None:intergenic | 55.0% | |
| GAGGATAAGAGTGGGGAGGA+GGG | - | chr6_4:24731126-24731145 | None:intergenic | 55.0% | |
| GATGGAGGATAAGAGTGGGG+AGG | - | chr6_4:24731130-24731149 | None:intergenic | 55.0% | |
| GGTGGATAGGCTGAAGATGG+AGG | - | chr6_4:24731145-24731164 | None:intergenic | 55.0% | |
| !! | GGTGGTGGATAGGCTGAAGA+TGG | - | chr6_4:24731148-24731167 | None:intergenic | 55.0% |
| GAGGATAACCTGGAGGTGGA+GGG | - | chr6_4:24731177-24731196 | None:intergenic | 55.0% | |
| GCGTTTGGAGGATAACCTGG+AGG | - | chr6_4:24731184-24731203 | None:intergenic | 55.0% | |
| CCAGCGTTTGGAGGATAACC+TGG | - | chr6_4:24731187-24731206 | None:intergenic | 55.0% | |
| CCAGGTTATCCTCCAAACGC+TGG | + | chr6_4:24731184-24731203 | Msa0983050:CDS | 55.0% | |
| CACAGTACTCAGTATGGCGG+AGG | - | chr6_4:24731312-24731331 | None:intergenic | 55.0% | |
| !! | GGAACGATAGCGGGGATCCA+AGG | + | chr6_4:24729655-24729674 | Msa0983050:CDS | 60.0% |
| GATCCAAGGGCAACCTCTGG+AGG | + | chr6_4:24729669-24729688 | Msa0983050:CDS | 60.0% | |
| ! | GGGCAACCTCTGGAGGTTAC+TGG | + | chr6_4:24729676-24729695 | Msa0983050:CDS | 60.0% |
| TGTCTGGTTGGCAGACACGC+AGG | + | chr6_4:24730737-24730756 | Msa0983050:intron | 60.0% | |
| GTATGGCTTGAGGAGGAGCC+TGG | - | chr6_4:24730914-24730933 | None:intergenic | 60.0% | |
| !! | GCCGGTGGTGTTGCCATGTA+TGG | - | chr6_4:24730938-24730957 | None:intergenic | 60.0% |
| ! | GCAGCAGCAGCAGGTATTGC+TGG | - | chr6_4:24731025-24731044 | None:intergenic | 60.0% |
| GGATAAGCAGCAGCAGCAGC+AGG | - | chr6_4:24731034-24731053 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGATAGGGTGA+TGG | - | chr6_4:24731091-24731110 | None:intergenic | 60.0% |
| !! | CGATGGTGGTGGTGGTGGAT+AGG | - | chr6_4:24731098-24731117 | None:intergenic | 60.0% |
| !! | TATGGCGATGGTGGTGGTGG+TGG | - | chr6_4:24731103-24731122 | None:intergenic | 60.0% |
| GGAGGATAAGAGTGGGGAGG+AGG | - | chr6_4:24731127-24731146 | None:intergenic | 60.0% | |
| ! | GGTGGAGGGTATGAAGGTGG+TGG | - | chr6_4:24731163-24731182 | None:intergenic | 60.0% |
| ! | GGAGGTGGAGGGTATGAAGG+TGG | - | chr6_4:24731166-24731185 | None:intergenic | 60.0% |
| ! | CCTGGAGGTGGAGGGTATGA+AGG | - | chr6_4:24731169-24731188 | None:intergenic | 60.0% |
| CCTTCATACCCTCCACCTCC+AGG | + | chr6_4:24731166-24731185 | Msa0983050:CDS | 60.0% | |
| GGAGGATAACCTGGAGGTGG+AGG | - | chr6_4:24731178-24731197 | None:intergenic | 60.0% | |
| !! | GGAACGATAGCGGGGATCCA+AGG | + | chr6_4:24729655-24729674 | Msa0983050:CDS | 60.0% |
| GATCCAAGGGCAACCTCTGG+AGG | + | chr6_4:24729669-24729688 | Msa0983050:CDS | 60.0% | |
| ! | GGGCAACCTCTGGAGGTTAC+TGG | + | chr6_4:24729676-24729695 | Msa0983050:CDS | 60.0% |
| TGTCTGGTTGGCAGACACGC+AGG | + | chr6_4:24730737-24730756 | Msa0983050:intron | 60.0% | |
| GTATGGCTTGAGGAGGAGCC+TGG | - | chr6_4:24730914-24730933 | None:intergenic | 60.0% | |
| !! | GCCGGTGGTGTTGCCATGTA+TGG | - | chr6_4:24730938-24730957 | None:intergenic | 60.0% |
| ! | GCAGCAGCAGCAGGTATTGC+TGG | - | chr6_4:24731025-24731044 | None:intergenic | 60.0% |
| GGATAAGCAGCAGCAGCAGC+AGG | - | chr6_4:24731034-24731053 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGATAGGGTGA+TGG | - | chr6_4:24731091-24731110 | None:intergenic | 60.0% |
| !! | CGATGGTGGTGGTGGTGGAT+AGG | - | chr6_4:24731098-24731117 | None:intergenic | 60.0% |
| !! | TATGGCGATGGTGGTGGTGG+TGG | - | chr6_4:24731103-24731122 | None:intergenic | 60.0% |
| GGAGGATAAGAGTGGGGAGG+AGG | - | chr6_4:24731127-24731146 | None:intergenic | 60.0% | |
| ! | GGTGGAGGGTATGAAGGTGG+TGG | - | chr6_4:24731163-24731182 | None:intergenic | 60.0% |
| ! | GGAGGTGGAGGGTATGAAGG+TGG | - | chr6_4:24731166-24731185 | None:intergenic | 60.0% |
| ! | CCTGGAGGTGGAGGGTATGA+AGG | - | chr6_4:24731169-24731188 | None:intergenic | 60.0% |
| CCTTCATACCCTCCACCTCC+AGG | + | chr6_4:24731166-24731185 | Msa0983050:CDS | 60.0% | |
| GGAGGATAACCTGGAGGTGG+AGG | - | chr6_4:24731178-24731197 | None:intergenic | 60.0% | |
| GGGGATCCAAGGGCAACCTC+TGG | + | chr6_4:24729666-24729685 | Msa0983050:CDS | 65.0% | |
| !! | GGGTATGGCGATGGTGGTGG+TGG | - | chr6_4:24731106-24731125 | None:intergenic | 65.0% |
| ! | GGAGGGTATGGCGATGGTGG+TGG | - | chr6_4:24731109-24731128 | None:intergenic | 65.0% |
| ! | GGAGGAGGGTATGGCGATGG+TGG | - | chr6_4:24731112-24731131 | None:intergenic | 65.0% |
| ! | TGGGGAGGAGGGTATGGCGA+TGG | - | chr6_4:24731115-24731134 | None:intergenic | 65.0% |
| GGGGATCCAAGGGCAACCTC+TGG | + | chr6_4:24729666-24729685 | Msa0983050:CDS | 65.0% | |
| !! | GGGTATGGCGATGGTGGTGG+TGG | - | chr6_4:24731106-24731125 | None:intergenic | 65.0% |
| ! | GGAGGGTATGGCGATGGTGG+TGG | - | chr6_4:24731109-24731128 | None:intergenic | 65.0% |
| ! | GGAGGAGGGTATGGCGATGG+TGG | - | chr6_4:24731112-24731131 | None:intergenic | 65.0% |
| ! | TGGGGAGGAGGGTATGGCGA+TGG | - | chr6_4:24731115-24731134 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 24729588 | 24731494 | 24729588 | ID=Msa0983050;Name=Msa0983050 |
| chr6_4 | mRNA | 24729588 | 24731494 | 24729588 | ID=Msa0983050-mRNA-1;Parent=Msa0983050;Name=Msa0983050-mRNA-1;_AED=0.13;_eAED=0.13;_QI=55|1|0.85|1|1|1|7|171|245 |
| chr6_4 | exon | 24729588 | 24729697 | 24729588 | ID=Msa0983050-mRNA-1:exon:7296;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24729782 | 24729886 | 24729782 | ID=Msa0983050-mRNA-1:exon:7297;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24729951 | 24730077 | 24729951 | ID=Msa0983050-mRNA-1:exon:7298;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24730150 | 24730221 | 24730150 | ID=Msa0983050-mRNA-1:exon:7299;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24730751 | 24730808 | 24730751 | ID=Msa0983050-mRNA-1:exon:7300;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24730908 | 24731205 | 24730908 | ID=Msa0983050-mRNA-1:exon:7301;Parent=Msa0983050-mRNA-1 |
| chr6_4 | exon | 24731301 | 24731494 | 24731301 | ID=Msa0983050-mRNA-1:exon:7302;Parent=Msa0983050-mRNA-1 |
| chr6_4 | five_prime_UTR | 24729588 | 24729642 | 24729588 | ID=Msa0983050-mRNA-1:five_prime_utr;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24729643 | 24729697 | 24729643 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24729782 | 24729886 | 24729782 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24729951 | 24730077 | 24729951 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24730150 | 24730221 | 24730150 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24730751 | 24730808 | 24730751 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24730908 | 24731205 | 24730908 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | CDS | 24731301 | 24731323 | 24731301 | ID=Msa0983050-mRNA-1:cds;Parent=Msa0983050-mRNA-1 |
| chr6_4 | three_prime_UTR | 24731324 | 24731494 | 24731324 | ID=Msa0983050-mRNA-1:three_prime_utr;Parent=Msa0983050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
