Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360250 | XP_003597727.1 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360250 | sp|Q9FMU5|UTP18_ARATH | 62.014 | 566 | 184 | 10 | 1 | 555 | 1 | 546 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360250 | Q2HU46 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1350710 | Msa1360250 | 0.881044 | 3.328032e-70 | -8.615850e-47 |
| Msa0266230 | Msa1360250 | 0.934433 | 4.066971e-96 | -8.615850e-47 |
| Msa0287690 | Msa1360250 | 0.946171 | 7.675206e-105 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360250 | MtrunA17_Chr2g0331501 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Msa1360250 | MtrunA17_Chr2g0279781 | 84.144 | 555 | 47 | 1 | 1 | 555 | 1 | 514 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1360250 | AT5G14050.1 | 62.014 | 566 | 184 | 10 | 1 | 555 | 1 | 546 | 0.0 | 671 |
Find 126 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAGATGCTTTGAATTT+TGG | 0.136326 | tig0016995:+19485 | None:intergenic |
| CTCTACTCCCCTCTTGAATT+TGG | 0.174548 | tig0016995:-20143 | Msa1360250:CDS |
| ATGGAACTGAACCGAATTAA+TGG | 0.250496 | tig0016995:+19584 | None:intergenic |
| TGAAATCCACTTCAGTATTC+AGG | 0.253259 | tig0016995:+18935 | None:intergenic |
| TAGCCAAAGTTAACAGATTA+AGG | 0.262384 | tig0016995:-19923 | Msa1360250:CDS |
| GACTGGGCACAGCTTGATTC+AGG | 0.267674 | tig0016995:-19807 | Msa1360250:CDS |
| CTTAACGTCATCCTCTCTTT+TGG | 0.282888 | tig0016995:+20307 | None:intergenic |
| AAGGCTAGAGTTGATAAAAT+TGG | 0.310494 | tig0016995:-19366 | Msa1360250:CDS |
| CCGAGAAGTCAGAATCTTCT+TGG | 0.315985 | tig0016995:+20024 | None:intergenic |
| TTAACAGATTAAGGAAGTTA+AGG | 0.316539 | tig0016995:-19914 | Msa1360250:CDS |
| TCCCCTCTTGAATTTGGAAA+TGG | 0.323398 | tig0016995:-20137 | Msa1360250:CDS |
| TACAATAGTGAGGAATTTCT+TGG | 0.340204 | tig0016995:-18991 | Msa1360250:CDS |
| CCAAGAAGATTCTGACTTCT+CGG | 0.345962 | tig0016995:-20024 | Msa1360250:CDS |
| CTTTGCGAAGAAAGCCGGTT+TGG | 0.353761 | tig0016995:-19980 | Msa1360250:CDS |
| TTCTAATGGTCCCATTAATT+CGG | 0.354772 | tig0016995:-19595 | Msa1360250:CDS |
| AGGTTATCAATGGTCTTGAT+AGG | 0.358287 | tig0016995:+18955 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | tig0016995:-19555 | Msa1360250:CDS |
| ACTTGTAGATGCAAACATTC+AGG | 0.369324 | tig0016995:-19622 | Msa1360250:CDS |
| TTTGAAAGAATCTAAGATTC+CGG | 0.381602 | tig0016995:+19526 | None:intergenic |
| GGGTCTCAAGTGATAATATC+TGG | 0.385058 | tig0016995:-19423 | Msa1360250:CDS |
| CCCCTCTTGAATTTGGAAAT+GGG | 0.395309 | tig0016995:-20136 | Msa1360250:CDS |
| TGGACTAAAATCAATACAAC+GGG | 0.404884 | tig0016995:+18780 | None:intergenic |
| CTTCCTTAATCTGTTAACTT+TGG | 0.410710 | tig0016995:+19920 | None:intergenic |
| TTTGCGAAGAAAGCCGGTTT+GGG | 0.414670 | tig0016995:-19979 | Msa1360250:CDS |
| AGATGGAAAGGAAGAACATT+TGG | 0.415307 | tig0016995:-20219 | Msa1360250:CDS |
| ATGGCTGTAGGAAACGCTTC+AGG | 0.416776 | tig0016995:-18745 | Msa1360250:CDS |
| GAGGACGAGAATGTGATATC+TGG | 0.419714 | tig0016995:-19885 | Msa1360250:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | tig0016995:-19385 | Msa1360250:CDS |
| TTCGAATGGGGCAATCTTCA+AGG | 0.424695 | tig0016995:+19466 | None:intergenic |
| ACAAAATCAAAGCAATTAGT+TGG | 0.426886 | tig0016995:-19237 | Msa1360250:CDS |
| ACAATAGTGAGGAATTTCTT+GGG | 0.430835 | tig0016995:-18990 | Msa1360250:CDS |
| CAAAAGAGAGGATGACGTTA+AGG | 0.431319 | tig0016995:-20306 | Msa1360250:CDS |
| TGGAACTGAACCGAATTAAT+GGG | 0.436701 | tig0016995:+19585 | None:intergenic |
| GAATTAATGGGACCATTAGA+AGG | 0.443632 | tig0016995:+19597 | None:intergenic |
| TCGGTTCAGTTCCATCGAAA+TGG | 0.445521 | tig0016995:-19576 | Msa1360250:CDS |
| TTCAGTATTCAGGTTATCAA+TGG | 0.445525 | tig0016995:+18945 | None:intergenic |
| AAGTAATGTTGTTGCGAGCC+GGG | 0.448192 | tig0016995:-19739 | Msa1360250:CDS |
| AACATTCAGGATCCTTCTAA+TGG | 0.448781 | tig0016995:-19609 | Msa1360250:CDS |
| TTCTAAAATGATAGCCTTTG+TGG | 0.449352 | tig0016995:-19289 | Msa1360250:CDS |
| TCTTCCTCATCCACCCAAAC+CGG | 0.450796 | tig0016995:+19966 | None:intergenic |
| TTTGCAGCTGGTTCGGCTAG+TGG | 0.463183 | tig0016995:-19027 | Msa1360250:CDS |
| CTTAGATTCTTTCAAATCGA+TGG | 0.465769 | tig0016995:-19519 | Msa1360250:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | tig0016995:-19084 | Msa1360250:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | tig0016995:+19042 | None:intergenic |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.470846 | tig0016995:-19910 | Msa1360250:CDS |
| ACTGACCGTTCTGCTGATAG+TGG | 0.477341 | tig0016995:-20059 | Msa1360250:CDS |
| TGTTGCGAGCCGGGGTTATG+AGG | 0.478638 | tig0016995:-19730 | Msa1360250:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | tig0016995:-19443 | Msa1360250:CDS |
| GATGATGAATTGACAGATGA+TGG | 0.480610 | tig0016995:-19762 | Msa1360250:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.481203 | tig0016995:-19824 | Msa1360250:CDS |
| GAAGTAATGTTGTTGCGAGC+CGG | 0.483388 | tig0016995:-19740 | Msa1360250:CDS |
| GTGATGGCCATGTTTACCAT+TGG | 0.483908 | tig0016995:-19140 | Msa1360250:CDS |
| AAATTGGTCCGCTGTTGGAT+AGG | 0.484483 | tig0016995:-19350 | Msa1360250:CDS |
| GGAAATGGGGATAACGATGA+AGG | 0.486981 | tig0016995:-20122 | Msa1360250:CDS |
| AATTGGTCCGCTGTTGGATA+GGG | 0.491909 | tig0016995:-19349 | Msa1360250:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | tig0016995:-19860 | Msa1360250:CDS |
| ACGGTCAGTGAAGAACAAAT+TGG | 0.494840 | tig0016995:+20073 | None:intergenic |
| TGATGGCCATGTTTACCATT+GGG | 0.497623 | tig0016995:-19139 | Msa1360250:CDS |
| TCTTTCAAATCGATGGCAAA+CGG | 0.500797 | tig0016995:-19512 | Msa1360250:CDS |
| AAGGAAGTTAAGGAAGGAAG+AGG | 0.502686 | tig0016995:-19904 | Msa1360250:CDS |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.505950 | tig0016995:-20231 | Msa1360250:CDS |
| TGATAAAATTGGTCCGCTGT+TGG | 0.506211 | tig0016995:-19355 | Msa1360250:CDS |
| GGAAGCCTTTGCAGCAGTCA+TGG | 0.506331 | tig0016995:+20094 | None:intergenic |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | tig0016995:-19859 | Msa1360250:CDS |
| TGATGCTTTGCGAAGAAAGC+CGG | 0.516338 | tig0016995:-19985 | Msa1360250:CDS |
| AAATATTAGCAATCTGTTCG+AGG | 0.517753 | tig0016995:-18891 | Msa1360250:CDS |
| ATAGCCTTTGTGGGTGATGA+AGG | 0.525756 | tig0016995:-19279 | Msa1360250:CDS |
| CCCTACTGGAGAAGTACAAA+GGG | 0.526256 | tig0016995:+19056 | None:intergenic |
| AGCAGCTCAAAATTGTTGCC+AGG | 0.528190 | tig0016995:-19663 | Msa1360250:CDS |
| AAAGCCGGTTTGGGTGGATG+AGG | 0.539602 | tig0016995:-19970 | Msa1360250:CDS |
| TTTCTAATCTACTTTAGGCA+TGG | 0.540589 | tig0016995:+18689 | None:intergenic |
| TCTCAGAACAAATGAAGACT+TGG | 0.543934 | tig0016995:-19694 | Msa1360250:CDS |
| CCCTCTTGAATTTGGAAATG+GGG | 0.544010 | tig0016995:-20135 | Msa1360250:CDS |
| GAGCCGGGGTTATGAGGATC+TGG | 0.545404 | tig0016995:-19724 | Msa1360250:CDS |
| ACTGGGCACAGCTTGATTCA+GGG | 0.545660 | tig0016995:-19806 | Msa1360250:CDS |
| GGAAGCCATGACTGCTGCAA+AGG | 0.547123 | tig0016995:-20099 | Msa1360250:CDS |
| CCCCATTTCCAAATTCAAGA+GGG | 0.548968 | tig0016995:+20135 | None:intergenic |
| GTAAACATGGCCATCACCAC+CGG | 0.549474 | tig0016995:+19146 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | tig0016995:+18791 | None:intergenic |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.554524 | tig0016995:-19545 | Msa1360250:CDS |
| TGTGAATATTTACAATAGTG+AGG | 0.554925 | tig0016995:-19001 | Msa1360250:CDS |
| CAATAGTGAGGAATTTCTTG+GGG | 0.554998 | tig0016995:-18989 | Msa1360250:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | tig0016995:-19444 | Msa1360250:CDS |
| GAAGATTCTGACTTCTCGGA+TGG | 0.559324 | tig0016995:-20020 | Msa1360250:CDS |
| TTGTTGAGCACCGGTGGTGA+TGG | 0.564654 | tig0016995:-19156 | Msa1360250:CDS |
| TCTAAAATGATAGCCTTTGT+GGG | 0.566464 | tig0016995:-19288 | Msa1360250:CDS |
| CCCTTTGTACTTCTCCAGTA+GGG | 0.569388 | tig0016995:-19056 | Msa1360250:CDS |
| GCGAAGAAAGCCGGTTTGGG+TGG | 0.571477 | tig0016995:-19976 | Msa1360250:CDS |
| GCCCTTTGTACTTCTCCAGT+AGG | 0.573251 | tig0016995:-19057 | Msa1360250:CDS |
| TGATAACCTGAATACTGAAG+TGG | 0.580415 | tig0016995:-18941 | Msa1360250:CDS |
| GGACAAAAGTTGTTGAGCAC+CGG | 0.580640 | tig0016995:-19165 | Msa1360250:CDS |
| ATTATCACTTGAGACCCATC+GGG | 0.584332 | tig0016995:+19429 | None:intergenic |
| TATTATCACTTGAGACCCAT+CGG | 0.587218 | tig0016995:+19428 | None:intergenic |
| GCTGTGCCCAGTCAGTTCCT+CGG | 0.588930 | tig0016995:+19817 | None:intergenic |
| GAAATGGGGATAACGATGAA+GGG | 0.589801 | tig0016995:-20121 | Msa1360250:CDS |
| CTTCAGTAAAAGCTAACGCA+CGG | 0.597212 | tig0016995:+19190 | None:intergenic |
| AGTAATGTTGTTGCGAGCCG+GGG | 0.597573 | tig0016995:-19738 | Msa1360250:CDS |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | tig0016995:+19565 | None:intergenic |
| TCCCCATTTCCAAATTCAAG+AGG | 0.605102 | tig0016995:+20134 | None:intergenic |
| TCAGATCCCAATGGTAAACA+TGG | 0.606421 | tig0016995:+19133 | None:intergenic |
| TTCGAGTATTCAATATGACC+TGG | 0.611892 | tig0016995:+19645 | None:intergenic |
| TTCAGTAAAAGCTAACGCAC+GGG | 0.612384 | tig0016995:+19191 | None:intergenic |
| TCCCTACTGGAGAAGTACAA+AGG | 0.621550 | tig0016995:+19055 | None:intergenic |
| CTGGACTAAAATCAATACAA+CGG | 0.621707 | tig0016995:+18779 | None:intergenic |
| ACCATTGGGATCTGAGAACA+AGG | 0.624102 | tig0016995:-19125 | Msa1360250:CDS |
| CCCATTTCCAAATTCAAGAG+GGG | 0.625050 | tig0016995:+20136 | None:intergenic |
| TAGAAATGAGACCAAAAGAG+AGG | 0.629102 | tig0016995:-20318 | Msa1360250:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.636934 | tig0016995:-19823 | Msa1360250:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | tig0016995:+18831 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | tig0016995:-19219 | Msa1360250:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | tig0016995:+18835 | None:intergenic |
| CATCCAGATCCTCATAACCC+CGG | 0.640892 | tig0016995:+19721 | None:intergenic |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | tig0016995:+18808 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.646807 | tig0016995:+18760 | None:intergenic |
| ATAACCTTCATCACCCACAA+AGG | 0.647464 | tig0016995:+19275 | None:intergenic |
| AAATGGGGATAACGATGAAG+GGG | 0.648646 | tig0016995:-20120 | Msa1360250:CDS |
| CAAAAGTTGTTGAGCACCGG+TGG | 0.649375 | tig0016995:-19162 | Msa1360250:CDS |
| AATAGTGAGGAATTTCTTGG+GGG | 0.659821 | tig0016995:-18988 | Msa1360250:CDS |
| ATGCACAAAGGTGTAGATGA+AGG | 0.661644 | tig0016995:-19096 | Msa1360250:CDS |
| TTCTCTTCCCTATCCAACAG+CGG | 0.664935 | tig0016995:+19342 | None:intergenic |
| AATCTTCTTGGTAAACAGTG+AGG | 0.688434 | tig0016995:+20036 | None:intergenic |
| TGAGGCCACTATCAGCAGAA+CGG | 0.695939 | tig0016995:+20054 | None:intergenic |
| CAACATGTGAAGCTCAACCG+AGG | 0.705882 | tig0016995:-19834 | Msa1360250:CDS |
| ACAAGGACTTGTATGCACAA+AGG | 0.714733 | tig0016995:-19108 | Msa1360250:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | tig0016995:+19124 | None:intergenic |
| GGACTAAAATCAATACAACG+GGG | 0.796660 | tig0016995:+18781 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | tig0016995:19664-19683 | Msa1360250:CDS | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | - | tig0016995:19664-19683 | Msa1360250:CDS | 20.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | - | tig0016995:18879-18898 | Msa1360250:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | - | tig0016995:18880-18899 | Msa1360250:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | - | tig0016995:19135-19154 | Msa1360250:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | + | tig0016995:19526-19545 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | - | tig0016995:19784-19803 | Msa1360250:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | - | tig0016995:19812-19831 | Msa1360250:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | - | tig0016995:20048-20067 | Msa1360250:CDS | 25.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | - | tig0016995:18879-18898 | Msa1360250:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | - | tig0016995:18880-18899 | Msa1360250:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | - | tig0016995:19135-19154 | Msa1360250:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | + | tig0016995:19526-19545 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | - | tig0016995:19784-19803 | Msa1360250:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | - | tig0016995:19812-19831 | Msa1360250:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | - | tig0016995:20048-20067 | Msa1360250:CDS | 25.0% |
| AAGGAAAAAGAAGTTGAAGA+TGG | - | tig0016995:18762-18781 | Msa1360250:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | - | tig0016995:19126-19145 | Msa1360250:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | + | tig0016995:19132-19151 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | - | tig0016995:19454-19473 | Msa1360250:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | - | tig0016995:19530-19549 | Msa1360250:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | + | tig0016995:19567-19586 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | tig0016995:19599-19618 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | - | tig0016995:19683-19702 | Msa1360250:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | - | tig0016995:19727-19746 | Msa1360250:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | + | tig0016995:19758-19777 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | - | tig0016995:19760-19779 | Msa1360250:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | - | tig0016995:19761-19780 | Msa1360250:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | - | tig0016995:20058-20077 | Msa1360250:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | - | tig0016995:20059-20078 | Msa1360250:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | + | tig0016995:20107-20126 | None:intergenic | 30.0% |
| AAATATTAGCAATCTGTTCG+AGG | - | tig0016995:20158-20177 | Msa1360250:CDS | 30.0% | |
| TGGACTAAAATCAATACAAC+GGG | + | tig0016995:20272-20291 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | + | tig0016995:20273-20292 | None:intergenic | 30.0% | |
| AAGGAAAAAGAAGTTGAAGA+TGG | - | tig0016995:18762-18781 | Msa1360250:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | - | tig0016995:19126-19145 | Msa1360250:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | + | tig0016995:19132-19151 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | - | tig0016995:19454-19473 | Msa1360250:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | - | tig0016995:19530-19549 | Msa1360250:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | + | tig0016995:19567-19586 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | + | tig0016995:19599-19618 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | - | tig0016995:19683-19702 | Msa1360250:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | - | tig0016995:19727-19746 | Msa1360250:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | + | tig0016995:19758-19777 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | - | tig0016995:19760-19779 | Msa1360250:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | - | tig0016995:19761-19780 | Msa1360250:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | - | tig0016995:20058-20077 | Msa1360250:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | - | tig0016995:20059-20078 | Msa1360250:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | + | tig0016995:20107-20126 | None:intergenic | 30.0% |
| AAATATTAGCAATCTGTTCG+AGG | - | tig0016995:20158-20177 | Msa1360250:CDS | 30.0% | |
| TGGACTAAAATCAATACAAC+GGG | + | tig0016995:20272-20291 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | + | tig0016995:20273-20292 | None:intergenic | 30.0% | |
| TAGAAATGAGACCAAAAGAG+AGG | - | tig0016995:18731-18750 | Msa1360250:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | - | tig0016995:18802-18821 | Msa1360250:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | + | tig0016995:18808-18827 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | - | tig0016995:18830-18849 | Msa1360250:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | + | tig0016995:19016-19035 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | - | tig0016995:19139-19158 | Msa1360250:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | tig0016995:19190-19209 | Msa1360250:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | - | tig0016995:19287-19306 | Msa1360250:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | - | tig0016995:19355-19374 | Msa1360250:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | + | tig0016995:19407-19426 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | - | tig0016995:19427-19446 | Msa1360250:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | - | tig0016995:19440-19459 | Msa1360250:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | + | tig0016995:19455-19474 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | + | tig0016995:19467-19486 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | + | tig0016995:19468-19487 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | - | tig0016995:19537-19556 | Msa1360250:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | tig0016995:19598-19617 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | tig0016995:19600-19619 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | + | tig0016995:19624-19643 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | - | tig0016995:19965-19984 | Msa1360250:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | - | tig0016995:20060-20079 | Msa1360250:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | - | tig0016995:20061-20080 | Msa1360250:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | + | tig0016995:20097-20116 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | - | tig0016995:20108-20127 | Msa1360250:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | + | tig0016995:20117-20136 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | tig0016995:20217-20236 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | + | tig0016995:20271-20290 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | - | tig0016995:20271-20290 | Msa1360250:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | - | tig0016995:20274-20293 | Msa1360250:CDS | 35.0% |
| TAGAAATGAGACCAAAAGAG+AGG | - | tig0016995:18731-18750 | Msa1360250:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | - | tig0016995:18802-18821 | Msa1360250:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | + | tig0016995:18808-18827 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | - | tig0016995:18830-18849 | Msa1360250:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | + | tig0016995:19016-19035 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | - | tig0016995:19139-19158 | Msa1360250:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | - | tig0016995:19190-19209 | Msa1360250:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | - | tig0016995:19287-19306 | Msa1360250:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | - | tig0016995:19355-19374 | Msa1360250:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | + | tig0016995:19407-19426 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | - | tig0016995:19427-19446 | Msa1360250:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | - | tig0016995:19440-19459 | Msa1360250:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | + | tig0016995:19455-19474 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | + | tig0016995:19467-19486 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | + | tig0016995:19468-19487 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | - | tig0016995:19537-19556 | Msa1360250:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | + | tig0016995:19598-19617 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | + | tig0016995:19600-19619 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | + | tig0016995:19624-19643 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | - | tig0016995:19965-19984 | Msa1360250:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | - | tig0016995:20060-20079 | Msa1360250:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | - | tig0016995:20061-20080 | Msa1360250:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | + | tig0016995:20097-20116 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | - | tig0016995:20108-20127 | Msa1360250:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | + | tig0016995:20117-20136 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | + | tig0016995:20217-20236 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | + | tig0016995:20271-20290 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | - | tig0016995:20271-20290 | Msa1360250:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | - | tig0016995:20274-20293 | Msa1360250:CDS | 35.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | + | tig0016995:18745-18764 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | - | tig0016995:18743-18762 | Msa1360250:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | - | tig0016995:18813-18832 | Msa1360250:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | tig0016995:18818-18837 | Msa1360250:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | - | tig0016995:18912-18931 | Msa1360250:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | + | tig0016995:18916-18935 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | - | tig0016995:18913-18932 | Msa1360250:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | + | tig0016995:18917-18936 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | - | tig0016995:18914-18933 | Msa1360250:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | + | tig0016995:18918-18937 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | - | tig0016995:18928-18947 | Msa1360250:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | - | tig0016995:18929-18948 | Msa1360250:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | + | tig0016995:18979-18998 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | - | tig0016995:19025-19044 | Msa1360250:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | - | tig0016995:19145-19164 | Msa1360250:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | tig0016995:19189-19208 | Msa1360250:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | - | tig0016995:19253-19272 | Msa1360250:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | tig0016995:19257-19276 | Msa1360250:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | + | tig0016995:19623-19642 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | - | tig0016995:19626-19645 | Msa1360250:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | - | tig0016995:19694-19713 | Msa1360250:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | + | tig0016995:19777-19796 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | tig0016995:19830-19849 | Msa1360250:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | + | tig0016995:19861-19880 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | + | tig0016995:19862-19881 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | - | tig0016995:19863-19882 | Msa1360250:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | - | tig0016995:19910-19929 | Msa1360250:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | + | tig0016995:19919-19938 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | - | tig0016995:19941-19960 | Msa1360250:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | - | tig0016995:19953-19972 | Msa1360250:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | + | tig0016995:20221-20240 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | tig0016995:20218-20237 | Msa1360250:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | - | tig0016995:20277-20296 | Msa1360250:CDS | 40.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | + | tig0016995:18745-18764 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | - | tig0016995:18743-18762 | Msa1360250:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | - | tig0016995:18813-18832 | Msa1360250:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | - | tig0016995:18818-18837 | Msa1360250:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | - | tig0016995:18912-18931 | Msa1360250:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | + | tig0016995:18916-18935 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | - | tig0016995:18913-18932 | Msa1360250:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | + | tig0016995:18917-18936 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | - | tig0016995:18914-18933 | Msa1360250:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | + | tig0016995:18918-18937 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | - | tig0016995:18928-18947 | Msa1360250:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | - | tig0016995:18929-18948 | Msa1360250:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | + | tig0016995:18979-18998 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | - | tig0016995:19025-19044 | Msa1360250:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | - | tig0016995:19145-19164 | Msa1360250:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | - | tig0016995:19189-19208 | Msa1360250:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | - | tig0016995:19253-19272 | Msa1360250:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | - | tig0016995:19257-19276 | Msa1360250:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | + | tig0016995:19623-19642 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | - | tig0016995:19626-19645 | Msa1360250:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | - | tig0016995:19694-19713 | Msa1360250:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | + | tig0016995:19777-19796 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | - | tig0016995:19830-19849 | Msa1360250:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | + | tig0016995:19861-19880 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | + | tig0016995:19862-19881 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | - | tig0016995:19863-19882 | Msa1360250:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | - | tig0016995:19910-19929 | Msa1360250:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | + | tig0016995:19919-19938 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | - | tig0016995:19941-19960 | Msa1360250:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | - | tig0016995:19953-19972 | Msa1360250:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | + | tig0016995:20221-20240 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | - | tig0016995:20218-20237 | Msa1360250:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | - | tig0016995:20277-20296 | Msa1360250:CDS | 40.0% |
| CTCTACTCCCCTCTTGAATT+TGG | - | tig0016995:18906-18925 | Msa1360250:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | - | tig0016995:18927-18946 | Msa1360250:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | + | tig0016995:19028-19047 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | - | tig0016995:19029-19048 | Msa1360250:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | - | tig0016995:19064-19083 | Msa1360250:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | - | tig0016995:19070-19089 | Msa1360250:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | - | tig0016995:19164-19183 | Msa1360250:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | - | tig0016995:19309-19328 | Msa1360250:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | - | tig0016995:19310-19329 | Msa1360250:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | - | tig0016995:19386-19405 | Msa1360250:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | - | tig0016995:19473-19492 | Msa1360250:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | tig0016995:19504-19523 | Msa1360250:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | tig0016995:19586-19605 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | tig0016995:19605-19624 | Msa1360250:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | tig0016995:19606-19625 | Msa1360250:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | - | tig0016995:19699-19718 | Msa1360250:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | - | tig0016995:19700-19719 | Msa1360250:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | + | tig0016995:19710-19729 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | - | tig0016995:19770-19789 | Msa1360250:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | - | tig0016995:19884-19903 | Msa1360250:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | - | tig0016995:19909-19928 | Msa1360250:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | - | tig0016995:19924-19943 | Msa1360250:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | tig0016995:19928-19947 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | + | tig0016995:19996-20015 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | - | tig0016995:19993-20012 | Msa1360250:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | + | tig0016995:19997-20016 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | - | tig0016995:20015-20034 | Msa1360250:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | + | tig0016995:20261-20280 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | - | tig0016995:20285-20304 | Msa1360250:CDS | 45.0% |
| CTCTACTCCCCTCTTGAATT+TGG | - | tig0016995:18906-18925 | Msa1360250:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | - | tig0016995:18927-18946 | Msa1360250:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | + | tig0016995:19028-19047 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | - | tig0016995:19029-19048 | Msa1360250:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | - | tig0016995:19064-19083 | Msa1360250:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | - | tig0016995:19070-19089 | Msa1360250:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | - | tig0016995:19164-19183 | Msa1360250:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | - | tig0016995:19309-19328 | Msa1360250:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | - | tig0016995:19310-19329 | Msa1360250:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | - | tig0016995:19386-19405 | Msa1360250:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | - | tig0016995:19473-19492 | Msa1360250:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | - | tig0016995:19504-19523 | Msa1360250:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | + | tig0016995:19586-19605 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | - | tig0016995:19605-19624 | Msa1360250:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | - | tig0016995:19606-19625 | Msa1360250:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | - | tig0016995:19699-19718 | Msa1360250:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | - | tig0016995:19700-19719 | Msa1360250:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | + | tig0016995:19710-19729 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | - | tig0016995:19770-19789 | Msa1360250:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | - | tig0016995:19884-19903 | Msa1360250:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | - | tig0016995:19909-19928 | Msa1360250:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | - | tig0016995:19924-19943 | Msa1360250:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | + | tig0016995:19928-19947 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | + | tig0016995:19996-20015 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | - | tig0016995:19993-20012 | Msa1360250:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | + | tig0016995:19997-20016 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | - | tig0016995:20015-20034 | Msa1360250:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | + | tig0016995:20261-20280 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | - | tig0016995:20285-20304 | Msa1360250:CDS | 45.0% |
| ACTGACCGTTCTGCTGATAG+TGG | - | tig0016995:18990-19009 | Msa1360250:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | + | tig0016995:18998-19017 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | - | tig0016995:19069-19088 | Msa1360250:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | + | tig0016995:19086-19105 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | - | tig0016995:19215-19234 | Msa1360250:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | - | tig0016995:19243-19262 | Msa1360250:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | - | tig0016995:19311-19330 | Msa1360250:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | + | tig0016995:19331-19350 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | tig0016995:19487-19506 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | - | tig0016995:19887-19906 | Msa1360250:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | + | tig0016995:19906-19925 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | - | tig0016995:19992-20011 | Msa1360250:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | + | tig0016995:20010-20029 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | tig0016995:20010-20029 | Msa1360250:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | + | tig0016995:20292-20311 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | tig0016995:20292-20311 | Msa1360250:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | - | tig0016995:20304-20323 | Msa1360250:CDS | 50.0% | |
| ACTGACCGTTCTGCTGATAG+TGG | - | tig0016995:18990-19009 | Msa1360250:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | + | tig0016995:18998-19017 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | - | tig0016995:19069-19088 | Msa1360250:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | + | tig0016995:19086-19105 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | - | tig0016995:19215-19234 | Msa1360250:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | - | tig0016995:19243-19262 | Msa1360250:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | - | tig0016995:19311-19330 | Msa1360250:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | + | tig0016995:19331-19350 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | + | tig0016995:19487-19506 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | - | tig0016995:19887-19906 | Msa1360250:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | + | tig0016995:19906-19925 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | - | tig0016995:19992-20011 | Msa1360250:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | + | tig0016995:20010-20029 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | - | tig0016995:20010-20029 | Msa1360250:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | + | tig0016995:20292-20311 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | - | tig0016995:20292-20311 | Msa1360250:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | - | tig0016995:20304-20323 | Msa1360250:CDS | 50.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | - | tig0016995:18950-18969 | Msa1360250:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | + | tig0016995:18958-18977 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | - | tig0016995:19079-19098 | Msa1360250:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | - | tig0016995:19225-19244 | Msa1360250:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | tig0016995:19226-19245 | Msa1360250:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | - | tig0016995:19242-19261 | Msa1360250:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | - | tig0016995:19893-19912 | Msa1360250:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | - | tig0016995:20022-20041 | Msa1360250:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | tig0016995:20244-20263 | None:intergenic | 55.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | - | tig0016995:18950-18969 | Msa1360250:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | + | tig0016995:18958-18977 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | - | tig0016995:19079-19098 | Msa1360250:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | - | tig0016995:19225-19244 | Msa1360250:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | - | tig0016995:19226-19245 | Msa1360250:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | - | tig0016995:19242-19261 | Msa1360250:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | - | tig0016995:19893-19912 | Msa1360250:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | - | tig0016995:20022-20041 | Msa1360250:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | + | tig0016995:20244-20263 | None:intergenic | 55.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | - | tig0016995:19073-19092 | Msa1360250:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | + | tig0016995:19235-19254 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | - | tig0016995:19319-19338 | Msa1360250:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | - | tig0016995:19325-19344 | Msa1360250:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | tig0016995:19494-19513 | Msa1360250:CDS | 60.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | - | tig0016995:19073-19092 | Msa1360250:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | + | tig0016995:19235-19254 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | - | tig0016995:19319-19338 | Msa1360250:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | - | tig0016995:19325-19344 | Msa1360250:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | - | tig0016995:19494-19513 | Msa1360250:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016995 | gene | 18702 | 20369 | 18702 | ID=Msa1360250;Name=Msa1360250 |
| tig0016995 | mRNA | 18702 | 20369 | 18702 | ID=Msa1360250-mRNA-1;Parent=Msa1360250;Name=Msa1360250-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|555 |
| tig0016995 | exon | 18702 | 20369 | 18702 | ID=Msa1360250-mRNA-1:exon:11836;Parent=Msa1360250-mRNA-1 |
| tig0016995 | CDS | 18702 | 20369 | 18702 | ID=Msa1360250-mRNA-1:cds;Parent=Msa1360250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
