Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350710 | XP_003597727.1 | 96.937 | 555 | 17 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350710 | sp|Q9FMU5|UTP18_ARATH | 61.837 | 566 | 185 | 10 | 1 | 555 | 1 | 546 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350710 | Q2HU46 | 96.937 | 555 | 17 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1350710 | Msa1360250 | 0.881044 | 3.328032e-70 | -8.615850e-47 |
| Msa0418980 | Msa1350710 | 0.801629 | 8.228770e-49 | -8.615850e-47 |
| Msa0266230 | Msa1350710 | 0.907618 | 4.170430e-81 | -8.615850e-47 |
| Msa0287690 | Msa1350710 | 0.928629 | 2.203422e-92 | -8.615850e-47 |
| Msa1211820 | Msa1350710 | 0.800843 | 1.191547e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350710 | MtrunA17_Chr2g0331501 | 96.937 | 555 | 17 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1115 |
| Msa1350710 | MtrunA17_Chr2g0279781 | 83.784 | 555 | 49 | 1 | 1 | 555 | 1 | 514 | 0.0 | 950 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1350710 | AT5G14050.1 | 61.837 | 566 | 185 | 10 | 1 | 555 | 1 | 546 | 0.0 | 670 |
Find 126 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAGATGCTTTGAATTT+TGG | 0.136326 | tig0011794:-39183 | None:intergenic |
| CTCTACTCCCCTCTTGAATT+TGG | 0.174548 | tig0011794:+38525 | Msa1350710:CDS |
| ATGGAACTGAACCGAATTAA+TGG | 0.250496 | tig0011794:-39084 | None:intergenic |
| TGAAATCCACTTCAGTATTC+AGG | 0.253259 | tig0011794:-39733 | None:intergenic |
| TAGCCAAAGTTAACAGATTA+AGG | 0.262384 | tig0011794:+38745 | Msa1350710:CDS |
| GACTGGGCACAGCTTGATTC+AGG | 0.267674 | tig0011794:+38861 | Msa1350710:CDS |
| CTTAACGTCATCCTCTCTTT+TGG | 0.282888 | tig0011794:-38361 | None:intergenic |
| AAGGCTAGAGTTGATAAAAT+TGG | 0.310494 | tig0011794:+39302 | Msa1350710:CDS |
| CCGAGAAGTCAGAATCTTCT+TGG | 0.315985 | tig0011794:-38644 | None:intergenic |
| TTAACAGATTAAGGAAGTTA+AGG | 0.316539 | tig0011794:+38754 | Msa1350710:CDS |
| TCCCCTCTTGAATTTGGAAA+TGG | 0.323398 | tig0011794:+38531 | Msa1350710:CDS |
| TACAATAGTGAGGAATTTCT+TGG | 0.340204 | tig0011794:+39677 | Msa1350710:CDS |
| CCAAGAAGATTCTGACTTCT+CGG | 0.345962 | tig0011794:+38644 | Msa1350710:CDS |
| CTTTGCGAAGAAAGCCGGTT+TGG | 0.353761 | tig0011794:+38688 | Msa1350710:CDS |
| TTCTAATGGTCCCATTAATT+CGG | 0.354772 | tig0011794:+39073 | Msa1350710:CDS |
| AGGTTATCAATGGTCTTGAT+AGG | 0.358287 | tig0011794:-39713 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | tig0011794:+39113 | Msa1350710:CDS |
| ACTTGTAGATGCAAACATTC+AGG | 0.369324 | tig0011794:+39046 | Msa1350710:CDS |
| TTTGAAAGAATCTAAGATTC+CGG | 0.381602 | tig0011794:-39142 | None:intergenic |
| GGGTCTCAAGTGATAATATC+TGG | 0.385058 | tig0011794:+39245 | Msa1350710:CDS |
| CCCCTCTTGAATTTGGAAAT+GGG | 0.395309 | tig0011794:+38532 | Msa1350710:CDS |
| TGGACTAAAATCAATACAAC+GGG | 0.404884 | tig0011794:-39888 | None:intergenic |
| CTTCCTTAATCTGTTAACTT+TGG | 0.410710 | tig0011794:-38748 | None:intergenic |
| TTTGCGAAGAAAGCCGGTTT+GGG | 0.414670 | tig0011794:+38689 | Msa1350710:CDS |
| AGATGGAAAGGAAGAACATT+TGG | 0.415307 | tig0011794:+38449 | Msa1350710:CDS |
| ATGGCTGTAGGAAACGCTTC+AGG | 0.416776 | tig0011794:+39923 | Msa1350710:CDS |
| TTCGAAAGGGGCAATCTTCA+AGG | 0.417875 | tig0011794:-39202 | None:intergenic |
| GAGGACGAGAATGTGATATC+TGG | 0.419714 | tig0011794:+38783 | Msa1350710:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | tig0011794:+39283 | Msa1350710:CDS |
| ACAAAATCAAAGCAATTAGT+TGG | 0.426886 | tig0011794:+39431 | Msa1350710:CDS |
| ACAATAGTGAGGAATTTCTT+GGG | 0.430835 | tig0011794:+39678 | Msa1350710:CDS |
| CAAAAGAGAGGATGACGTTA+AGG | 0.431319 | tig0011794:+38362 | Msa1350710:CDS |
| TGGAACTGAACCGAATTAAT+GGG | 0.436701 | tig0011794:-39083 | None:intergenic |
| GAATTAATGGGACCATTAGA+AGG | 0.443632 | tig0011794:-39071 | None:intergenic |
| TCGGTTCAGTTCCATCGAAA+TGG | 0.445521 | tig0011794:+39092 | Msa1350710:CDS |
| TTCAGTATTCAGGTTATCAA+TGG | 0.445525 | tig0011794:-39723 | None:intergenic |
| AAGTAATGTTGTTGCGAGCC+GGG | 0.448192 | tig0011794:+38929 | Msa1350710:CDS |
| AACATTCAGGATCCTTCTAA+TGG | 0.448781 | tig0011794:+39059 | Msa1350710:CDS |
| TTCTAAAATGATAGCCTTTG+TGG | 0.449352 | tig0011794:+39379 | Msa1350710:CDS |
| AAATATTAGCAATCTGTTCA+AGG | 0.450551 | tig0011794:+39777 | Msa1350710:CDS |
| TCTTCCTCATCCACCCAAAC+CGG | 0.450796 | tig0011794:-38702 | None:intergenic |
| TTTGCAGCTGGTTCGGCTAG+TGG | 0.463183 | tig0011794:+39641 | Msa1350710:CDS |
| CTTAGATTCTTTCAAATCGA+TGG | 0.465769 | tig0011794:+39149 | Msa1350710:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | tig0011794:+39584 | Msa1350710:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | tig0011794:-39626 | None:intergenic |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.470846 | tig0011794:+38758 | Msa1350710:CDS |
| ACTGACCGTTCTGCTGATAG+TGG | 0.477341 | tig0011794:+38609 | Msa1350710:CDS |
| TGTTGCGAGCCGGGGTTATG+AGG | 0.478638 | tig0011794:+38938 | Msa1350710:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | tig0011794:+39225 | Msa1350710:CDS |
| GATGATGAATTGACAGATGA+TGG | 0.480610 | tig0011794:+38906 | Msa1350710:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.481203 | tig0011794:+38844 | Msa1350710:CDS |
| GAAGTAATGTTGTTGCGAGC+CGG | 0.483388 | tig0011794:+38928 | Msa1350710:CDS |
| GTGATGGCCATGTTTACCAT+TGG | 0.483908 | tig0011794:+39528 | Msa1350710:CDS |
| AAATTGGTCCGCTGTTGGAT+AGG | 0.484483 | tig0011794:+39318 | Msa1350710:CDS |
| GGAAATGGGGATAACGATGA+AGG | 0.486981 | tig0011794:+38546 | Msa1350710:CDS |
| AATTGGTCCGCTGTTGGATA+GGG | 0.491909 | tig0011794:+39319 | Msa1350710:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | tig0011794:+38808 | Msa1350710:CDS |
| ACGGTCAGTGAAGAACAAAT+TGG | 0.494840 | tig0011794:-38595 | None:intergenic |
| TGATGGCCATGTTTACCATT+GGG | 0.497623 | tig0011794:+39529 | Msa1350710:CDS |
| TCTTTCAAATCGATGGCAAA+CGG | 0.500797 | tig0011794:+39156 | Msa1350710:CDS |
| AAGGAAGTTAAGGAAGGAAG+AGG | 0.502686 | tig0011794:+38764 | Msa1350710:CDS |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.505950 | tig0011794:+38437 | Msa1350710:CDS |
| TGATAAAATTGGTCCGCTGT+TGG | 0.506211 | tig0011794:+39313 | Msa1350710:CDS |
| GGAAGCCTTTGCAGCAGTCA+TGG | 0.506331 | tig0011794:-38574 | None:intergenic |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | tig0011794:+38809 | Msa1350710:CDS |
| TGATGCTTTGCGAAGAAAGC+CGG | 0.516338 | tig0011794:+38683 | Msa1350710:CDS |
| ATAGCCTTTGTGGGTGATGA+AGG | 0.525756 | tig0011794:+39389 | Msa1350710:CDS |
| CCCTACTGGAGAAGTACAAA+GGG | 0.526256 | tig0011794:-39612 | None:intergenic |
| AGCAGCTCAAAATTGTTGCC+AGG | 0.528190 | tig0011794:+39005 | Msa1350710:CDS |
| AAAGCCGGTTTGGGTGGATG+AGG | 0.539602 | tig0011794:+38698 | Msa1350710:CDS |
| TTTCTAATCTACTTTAGGCA+TGG | 0.540589 | tig0011794:-39979 | None:intergenic |
| TCTCAGAACAAATGAAGACT+TGG | 0.543934 | tig0011794:+38974 | Msa1350710:CDS |
| CCCTCTTGAATTTGGAAATG+GGG | 0.544010 | tig0011794:+38533 | Msa1350710:CDS |
| GAGCCGGGGTTATGAGGATC+TGG | 0.545404 | tig0011794:+38944 | Msa1350710:CDS |
| ACTGGGCACAGCTTGATTCA+GGG | 0.545660 | tig0011794:+38862 | Msa1350710:CDS |
| GGAAGCCATGACTGCTGCAA+AGG | 0.547123 | tig0011794:+38569 | Msa1350710:CDS |
| CCCCATTTCCAAATTCAAGA+GGG | 0.548968 | tig0011794:-38533 | None:intergenic |
| GTAAACATGGCCATCACCAC+CGG | 0.549474 | tig0011794:-39522 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | tig0011794:-39877 | None:intergenic |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.554524 | tig0011794:+39123 | Msa1350710:CDS |
| TGTGAATATTTACAATAGTG+AGG | 0.554925 | tig0011794:+39667 | Msa1350710:CDS |
| CAATAGTGAGGAATTTCTTG+GGG | 0.554998 | tig0011794:+39679 | Msa1350710:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | tig0011794:+39224 | Msa1350710:CDS |
| GAAGATTCTGACTTCTCGGA+TGG | 0.559324 | tig0011794:+38648 | Msa1350710:CDS |
| TTGTTGAGCACCGGTGGTGA+TGG | 0.564654 | tig0011794:+39512 | Msa1350710:CDS |
| TCTAAAATGATAGCCTTTGT+GGG | 0.566464 | tig0011794:+39380 | Msa1350710:CDS |
| CCCTTTGTACTTCTCCAGTA+GGG | 0.569388 | tig0011794:+39612 | Msa1350710:CDS |
| GCGAAGAAAGCCGGTTTGGG+TGG | 0.571477 | tig0011794:+38692 | Msa1350710:CDS |
| GCCCTTTGTACTTCTCCAGT+AGG | 0.573251 | tig0011794:+39611 | Msa1350710:CDS |
| TGATAACCTGAATACTGAAG+TGG | 0.580415 | tig0011794:+39727 | Msa1350710:CDS |
| GGACAAAAGTTGTTGAGCAC+CGG | 0.580640 | tig0011794:+39503 | Msa1350710:CDS |
| ATTATCACTTGAGACCCATC+GGG | 0.584332 | tig0011794:-39239 | None:intergenic |
| TATTATCACTTGAGACCCAT+CGG | 0.587218 | tig0011794:-39240 | None:intergenic |
| GCTGTGCCCAGTCAGTTCCT+CGG | 0.588930 | tig0011794:-38851 | None:intergenic |
| GAAATGGGGATAACGATGAA+GGG | 0.589801 | tig0011794:+38547 | Msa1350710:CDS |
| CTTCAGTAAAAGCTAACGCA+CGG | 0.597212 | tig0011794:-39478 | None:intergenic |
| AGTAATGTTGTTGCGAGCCG+GGG | 0.597573 | tig0011794:+38930 | Msa1350710:CDS |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | tig0011794:-39103 | None:intergenic |
| TCCCCATTTCCAAATTCAAG+AGG | 0.605102 | tig0011794:-38534 | None:intergenic |
| TCAGATCCCAATGGTAAACA+TGG | 0.606421 | tig0011794:-39535 | None:intergenic |
| TTCGAGTATTCAATATGACC+TGG | 0.611892 | tig0011794:-39023 | None:intergenic |
| TTCAGTAAAAGCTAACGCAC+GGG | 0.612384 | tig0011794:-39477 | None:intergenic |
| TCCCTACTGGAGAAGTACAA+AGG | 0.621550 | tig0011794:-39613 | None:intergenic |
| CTGGACTAAAATCAATACAA+CGG | 0.621707 | tig0011794:-39889 | None:intergenic |
| ACCATTGGGATCTGAGAACA+AGG | 0.624102 | tig0011794:+39543 | Msa1350710:CDS |
| CCCATTTCCAAATTCAAGAG+GGG | 0.625050 | tig0011794:-38532 | None:intergenic |
| TAGAAATGAGACCAAAAGAG+AGG | 0.629102 | tig0011794:+38350 | Msa1350710:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.636934 | tig0011794:+38845 | Msa1350710:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | tig0011794:-39837 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | tig0011794:+39449 | Msa1350710:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | tig0011794:-39833 | None:intergenic |
| CATCCAGATCCTCATAACCC+CGG | 0.640892 | tig0011794:-38947 | None:intergenic |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | tig0011794:-39860 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.646807 | tig0011794:-39908 | None:intergenic |
| ATAACCTTCATCACCCACAA+AGG | 0.647464 | tig0011794:-39393 | None:intergenic |
| AAATGGGGATAACGATGAAG+GGG | 0.648646 | tig0011794:+38548 | Msa1350710:CDS |
| CAAAAGTTGTTGAGCACCGG+TGG | 0.649375 | tig0011794:+39506 | Msa1350710:CDS |
| AATAGTGAGGAATTTCTTGG+GGG | 0.659821 | tig0011794:+39680 | Msa1350710:CDS |
| ATGCACAAAGGTGTAGATGA+AGG | 0.661644 | tig0011794:+39572 | Msa1350710:CDS |
| TTCTCTTCCCTATCCAACAG+CGG | 0.664935 | tig0011794:-39326 | None:intergenic |
| AATCTTCTTGGTAAACAGTG+AGG | 0.688434 | tig0011794:-38632 | None:intergenic |
| TGAGGCCACTATCAGCAGAA+CGG | 0.695939 | tig0011794:-38614 | None:intergenic |
| CAACATGTGAAGCTCAACCG+AGG | 0.705882 | tig0011794:+38834 | Msa1350710:CDS |
| ACAAGGACTTGTATGCACAA+AGG | 0.714733 | tig0011794:+39560 | Msa1350710:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | tig0011794:-39544 | None:intergenic |
| GGACTAAAATCAATACAACG+GGG | 0.796660 | tig0011794:-39887 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | tig0011794:39283-39302 | Msa1350710:CDS | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | tig0011794:39283-39302 | Msa1350710:CDS | 20.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | + | tig0011794:38498-38517 | Msa1350710:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | + | tig0011794:38499-38518 | Msa1350710:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | + | tig0011794:38754-38773 | Msa1350710:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | - | tig0011794:39145-39164 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | + | tig0011794:39403-39422 | Msa1350710:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | + | tig0011794:39431-39450 | Msa1350710:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | + | tig0011794:39667-39686 | Msa1350710:CDS | 25.0% |
| ! | AAATATTAGCAATCTGTTCA+AGG | + | tig0011794:39777-39796 | Msa1350710:CDS | 25.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | + | tig0011794:38498-38517 | Msa1350710:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | + | tig0011794:38499-38518 | Msa1350710:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | + | tig0011794:38754-38773 | Msa1350710:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | - | tig0011794:39145-39164 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | + | tig0011794:39403-39422 | Msa1350710:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | + | tig0011794:39431-39450 | Msa1350710:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | + | tig0011794:39667-39686 | Msa1350710:CDS | 25.0% |
| ! | AAATATTAGCAATCTGTTCA+AGG | + | tig0011794:39777-39796 | Msa1350710:CDS | 25.0% |
| AAGGAAAAAGATGTTGAAGA+TGG | + | tig0011794:38381-38400 | Msa1350710:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | + | tig0011794:38745-38764 | Msa1350710:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | - | tig0011794:38751-38770 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | + | tig0011794:39073-39092 | Msa1350710:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | + | tig0011794:39149-39168 | Msa1350710:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | - | tig0011794:39186-39205 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAA+GGG | - | tig0011794:39218-39237 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | + | tig0011794:39302-39321 | Msa1350710:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | + | tig0011794:39346-39365 | Msa1350710:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | - | tig0011794:39377-39396 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | + | tig0011794:39379-39398 | Msa1350710:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | + | tig0011794:39380-39399 | Msa1350710:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | + | tig0011794:39677-39696 | Msa1350710:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | + | tig0011794:39678-39697 | Msa1350710:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | - | tig0011794:39726-39745 | None:intergenic | 30.0% |
| TGGACTAAAATCAATACAAC+GGG | - | tig0011794:39891-39910 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | - | tig0011794:39892-39911 | None:intergenic | 30.0% | |
| AAGGAAAAAGATGTTGAAGA+TGG | + | tig0011794:38381-38400 | Msa1350710:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | + | tig0011794:38745-38764 | Msa1350710:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | - | tig0011794:38751-38770 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | + | tig0011794:39073-39092 | Msa1350710:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | + | tig0011794:39149-39168 | Msa1350710:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | - | tig0011794:39186-39205 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAA+GGG | - | tig0011794:39218-39237 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | + | tig0011794:39302-39321 | Msa1350710:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | + | tig0011794:39346-39365 | Msa1350710:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | - | tig0011794:39377-39396 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | + | tig0011794:39379-39398 | Msa1350710:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | + | tig0011794:39380-39399 | Msa1350710:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | + | tig0011794:39677-39696 | Msa1350710:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | + | tig0011794:39678-39697 | Msa1350710:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | - | tig0011794:39726-39745 | None:intergenic | 30.0% |
| TGGACTAAAATCAATACAAC+GGG | - | tig0011794:39891-39910 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | - | tig0011794:39892-39911 | None:intergenic | 30.0% | |
| TAGAAATGAGACCAAAAGAG+AGG | + | tig0011794:38350-38369 | Msa1350710:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | + | tig0011794:38421-38440 | Msa1350710:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | - | tig0011794:38427-38446 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | + | tig0011794:38449-38468 | Msa1350710:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | - | tig0011794:38635-38654 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | + | tig0011794:38758-38777 | Msa1350710:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | tig0011794:38809-38828 | Msa1350710:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | + | tig0011794:38906-38925 | Msa1350710:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | + | tig0011794:38974-38993 | Msa1350710:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | - | tig0011794:39026-39045 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | + | tig0011794:39046-39065 | Msa1350710:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | + | tig0011794:39059-39078 | Msa1350710:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | - | tig0011794:39074-39093 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | - | tig0011794:39086-39105 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | - | tig0011794:39087-39106 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | + | tig0011794:39156-39175 | Msa1350710:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAAAG+GGG | - | tig0011794:39217-39236 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+AGG | - | tig0011794:39219-39238 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | - | tig0011794:39243-39262 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | + | tig0011794:39584-39603 | Msa1350710:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | + | tig0011794:39679-39698 | Msa1350710:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | + | tig0011794:39680-39699 | Msa1350710:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | - | tig0011794:39716-39735 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | + | tig0011794:39727-39746 | Msa1350710:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | - | tig0011794:39736-39755 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | tig0011794:39836-39855 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | - | tig0011794:39890-39909 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | + | tig0011794:39890-39909 | Msa1350710:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | + | tig0011794:39893-39912 | Msa1350710:CDS | 35.0% |
| TAGAAATGAGACCAAAAGAG+AGG | + | tig0011794:38350-38369 | Msa1350710:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | + | tig0011794:38421-38440 | Msa1350710:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | - | tig0011794:38427-38446 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | + | tig0011794:38449-38468 | Msa1350710:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | - | tig0011794:38635-38654 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | + | tig0011794:38758-38777 | Msa1350710:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | tig0011794:38809-38828 | Msa1350710:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | + | tig0011794:38906-38925 | Msa1350710:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | + | tig0011794:38974-38993 | Msa1350710:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | - | tig0011794:39026-39045 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | + | tig0011794:39046-39065 | Msa1350710:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | + | tig0011794:39059-39078 | Msa1350710:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | - | tig0011794:39074-39093 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | - | tig0011794:39086-39105 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | - | tig0011794:39087-39106 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | + | tig0011794:39156-39175 | Msa1350710:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAAAG+GGG | - | tig0011794:39217-39236 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+AGG | - | tig0011794:39219-39238 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | - | tig0011794:39243-39262 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | + | tig0011794:39584-39603 | Msa1350710:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | + | tig0011794:39679-39698 | Msa1350710:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | + | tig0011794:39680-39699 | Msa1350710:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | - | tig0011794:39716-39735 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | + | tig0011794:39727-39746 | Msa1350710:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | - | tig0011794:39736-39755 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | tig0011794:39836-39855 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | - | tig0011794:39890-39909 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | + | tig0011794:39890-39909 | Msa1350710:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | + | tig0011794:39893-39912 | Msa1350710:CDS | 35.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | - | tig0011794:38364-38383 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | + | tig0011794:38362-38381 | Msa1350710:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | + | tig0011794:38432-38451 | Msa1350710:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | tig0011794:38437-38456 | Msa1350710:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | + | tig0011794:38531-38550 | Msa1350710:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | - | tig0011794:38535-38554 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | + | tig0011794:38532-38551 | Msa1350710:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | - | tig0011794:38536-38555 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | + | tig0011794:38533-38552 | Msa1350710:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | - | tig0011794:38537-38556 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | + | tig0011794:38547-38566 | Msa1350710:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | + | tig0011794:38548-38567 | Msa1350710:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | - | tig0011794:38598-38617 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | + | tig0011794:38644-38663 | Msa1350710:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | + | tig0011794:38764-38783 | Msa1350710:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | tig0011794:38808-38827 | Msa1350710:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | + | tig0011794:38872-38891 | Msa1350710:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | tig0011794:38876-38895 | Msa1350710:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | - | tig0011794:39242-39261 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | + | tig0011794:39245-39264 | Msa1350710:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | + | tig0011794:39313-39332 | Msa1350710:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | - | tig0011794:39396-39415 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | tig0011794:39449-39468 | Msa1350710:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | - | tig0011794:39480-39499 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | - | tig0011794:39481-39500 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | + | tig0011794:39482-39501 | Msa1350710:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | + | tig0011794:39529-39548 | Msa1350710:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | - | tig0011794:39538-39557 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | + | tig0011794:39560-39579 | Msa1350710:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | + | tig0011794:39572-39591 | Msa1350710:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | - | tig0011794:39840-39859 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | tig0011794:39837-39856 | Msa1350710:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | + | tig0011794:39896-39915 | Msa1350710:CDS | 40.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | - | tig0011794:38364-38383 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | + | tig0011794:38362-38381 | Msa1350710:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | + | tig0011794:38432-38451 | Msa1350710:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | tig0011794:38437-38456 | Msa1350710:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | + | tig0011794:38531-38550 | Msa1350710:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | - | tig0011794:38535-38554 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | + | tig0011794:38532-38551 | Msa1350710:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | - | tig0011794:38536-38555 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | + | tig0011794:38533-38552 | Msa1350710:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | - | tig0011794:38537-38556 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | + | tig0011794:38547-38566 | Msa1350710:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | + | tig0011794:38548-38567 | Msa1350710:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | - | tig0011794:38598-38617 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | + | tig0011794:38644-38663 | Msa1350710:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | + | tig0011794:38764-38783 | Msa1350710:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | tig0011794:38808-38827 | Msa1350710:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | + | tig0011794:38872-38891 | Msa1350710:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | tig0011794:38876-38895 | Msa1350710:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | - | tig0011794:39242-39261 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | + | tig0011794:39245-39264 | Msa1350710:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | + | tig0011794:39313-39332 | Msa1350710:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | - | tig0011794:39396-39415 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | tig0011794:39449-39468 | Msa1350710:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | - | tig0011794:39480-39499 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | - | tig0011794:39481-39500 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | + | tig0011794:39482-39501 | Msa1350710:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | + | tig0011794:39529-39548 | Msa1350710:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | - | tig0011794:39538-39557 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | + | tig0011794:39560-39579 | Msa1350710:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | + | tig0011794:39572-39591 | Msa1350710:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | - | tig0011794:39840-39859 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | tig0011794:39837-39856 | Msa1350710:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | + | tig0011794:39896-39915 | Msa1350710:CDS | 40.0% |
| CTCTACTCCCCTCTTGAATT+TGG | + | tig0011794:38525-38544 | Msa1350710:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | + | tig0011794:38546-38565 | Msa1350710:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | - | tig0011794:38647-38666 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | + | tig0011794:38648-38667 | Msa1350710:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | + | tig0011794:38683-38702 | Msa1350710:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | + | tig0011794:38689-38708 | Msa1350710:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | + | tig0011794:38783-38802 | Msa1350710:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | + | tig0011794:38928-38947 | Msa1350710:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | + | tig0011794:38929-38948 | Msa1350710:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | + | tig0011794:39005-39024 | Msa1350710:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | + | tig0011794:39092-39111 | Msa1350710:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | tig0011794:39123-39142 | Msa1350710:CDS | 45.0% |
| TTCGAAAGGGGCAATCTTCA+AGG | - | tig0011794:39205-39224 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | tig0011794:39224-39243 | Msa1350710:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | tig0011794:39225-39244 | Msa1350710:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | + | tig0011794:39318-39337 | Msa1350710:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | + | tig0011794:39319-39338 | Msa1350710:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | - | tig0011794:39329-39348 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | + | tig0011794:39389-39408 | Msa1350710:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | + | tig0011794:39503-39522 | Msa1350710:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | + | tig0011794:39528-39547 | Msa1350710:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | + | tig0011794:39543-39562 | Msa1350710:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | tig0011794:39547-39566 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | - | tig0011794:39615-39634 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | + | tig0011794:39612-39631 | Msa1350710:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | - | tig0011794:39616-39635 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | + | tig0011794:39634-39653 | Msa1350710:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | - | tig0011794:39880-39899 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | + | tig0011794:39904-39923 | Msa1350710:CDS | 45.0% |
| CTCTACTCCCCTCTTGAATT+TGG | + | tig0011794:38525-38544 | Msa1350710:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | + | tig0011794:38546-38565 | Msa1350710:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | - | tig0011794:38647-38666 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | + | tig0011794:38648-38667 | Msa1350710:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | + | tig0011794:38683-38702 | Msa1350710:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | + | tig0011794:38689-38708 | Msa1350710:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | + | tig0011794:38783-38802 | Msa1350710:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | + | tig0011794:38928-38947 | Msa1350710:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | + | tig0011794:38929-38948 | Msa1350710:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | + | tig0011794:39005-39024 | Msa1350710:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | + | tig0011794:39092-39111 | Msa1350710:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | tig0011794:39123-39142 | Msa1350710:CDS | 45.0% |
| TTCGAAAGGGGCAATCTTCA+AGG | - | tig0011794:39205-39224 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | tig0011794:39224-39243 | Msa1350710:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | tig0011794:39225-39244 | Msa1350710:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | + | tig0011794:39318-39337 | Msa1350710:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | + | tig0011794:39319-39338 | Msa1350710:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | - | tig0011794:39329-39348 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | + | tig0011794:39389-39408 | Msa1350710:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | + | tig0011794:39503-39522 | Msa1350710:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | + | tig0011794:39528-39547 | Msa1350710:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | + | tig0011794:39543-39562 | Msa1350710:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | tig0011794:39547-39566 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | - | tig0011794:39615-39634 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | + | tig0011794:39612-39631 | Msa1350710:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | - | tig0011794:39616-39635 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | + | tig0011794:39634-39653 | Msa1350710:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | - | tig0011794:39880-39899 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | + | tig0011794:39904-39923 | Msa1350710:CDS | 45.0% |
| ACTGACCGTTCTGCTGATAG+TGG | + | tig0011794:38609-38628 | Msa1350710:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | - | tig0011794:38617-38636 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | + | tig0011794:38688-38707 | Msa1350710:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | - | tig0011794:38705-38724 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | + | tig0011794:38834-38853 | Msa1350710:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | + | tig0011794:38862-38881 | Msa1350710:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | + | tig0011794:38930-38949 | Msa1350710:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | - | tig0011794:38950-38969 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | tig0011794:39106-39125 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | + | tig0011794:39506-39525 | Msa1350710:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | - | tig0011794:39525-39544 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | + | tig0011794:39611-39630 | Msa1350710:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | - | tig0011794:39629-39648 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | tig0011794:39629-39648 | Msa1350710:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | - | tig0011794:39911-39930 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | tig0011794:39911-39930 | Msa1350710:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | + | tig0011794:39923-39942 | Msa1350710:CDS | 50.0% | |
| ACTGACCGTTCTGCTGATAG+TGG | + | tig0011794:38609-38628 | Msa1350710:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | - | tig0011794:38617-38636 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | + | tig0011794:38688-38707 | Msa1350710:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | - | tig0011794:38705-38724 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | + | tig0011794:38834-38853 | Msa1350710:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | + | tig0011794:38862-38881 | Msa1350710:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | + | tig0011794:38930-38949 | Msa1350710:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | - | tig0011794:38950-38969 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | tig0011794:39106-39125 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | + | tig0011794:39506-39525 | Msa1350710:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | - | tig0011794:39525-39544 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | + | tig0011794:39611-39630 | Msa1350710:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | - | tig0011794:39629-39648 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | tig0011794:39629-39648 | Msa1350710:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | - | tig0011794:39911-39930 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | tig0011794:39911-39930 | Msa1350710:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | + | tig0011794:39923-39942 | Msa1350710:CDS | 50.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | + | tig0011794:38569-38588 | Msa1350710:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | - | tig0011794:38577-38596 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | + | tig0011794:38698-38717 | Msa1350710:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | + | tig0011794:38844-38863 | Msa1350710:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | tig0011794:38845-38864 | Msa1350710:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | + | tig0011794:38861-38880 | Msa1350710:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | + | tig0011794:39512-39531 | Msa1350710:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | + | tig0011794:39641-39660 | Msa1350710:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | tig0011794:39863-39882 | None:intergenic | 55.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | + | tig0011794:38569-38588 | Msa1350710:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | - | tig0011794:38577-38596 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | + | tig0011794:38698-38717 | Msa1350710:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | + | tig0011794:38844-38863 | Msa1350710:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | tig0011794:38845-38864 | Msa1350710:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | + | tig0011794:38861-38880 | Msa1350710:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | + | tig0011794:39512-39531 | Msa1350710:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | + | tig0011794:39641-39660 | Msa1350710:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | tig0011794:39863-39882 | None:intergenic | 55.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | + | tig0011794:38692-38711 | Msa1350710:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | - | tig0011794:38854-38873 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | + | tig0011794:38938-38957 | Msa1350710:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | + | tig0011794:38944-38963 | Msa1350710:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | tig0011794:39113-39132 | Msa1350710:CDS | 60.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | + | tig0011794:38692-38711 | Msa1350710:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | - | tig0011794:38854-38873 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | + | tig0011794:38938-38957 | Msa1350710:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | + | tig0011794:38944-38963 | Msa1350710:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | tig0011794:39113-39132 | Msa1350710:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0011794 | gene | 38321 | 39988 | 38321 | ID=Msa1350710;Name=Msa1350710 |
| tig0011794 | mRNA | 38321 | 39988 | 38321 | ID=Msa1350710-mRNA-1;Parent=Msa1350710;Name=Msa1350710-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|555 |
| tig0011794 | exon | 38321 | 39988 | 38321 | ID=Msa1350710-mRNA-1:exon:7517;Parent=Msa1350710-mRNA-1 |
| tig0011794 | CDS | 38321 | 39988 | 38321 | ID=Msa1350710-mRNA-1:cds;Parent=Msa1350710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
