Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0287690 | XP_003597727.1 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0287690 | sp|Q9FMU5|UTP18_ARATH | 62.014 | 566 | 184 | 10 | 1 | 555 | 1 | 546 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0287690 | Q2HU46 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0266230 | Msa0287690 | 0.969035 | 1.556923e-129 | -8.615850e-47 |
| Msa0287690 | Msa1211820 | 0.806591 | 7.635695e-50 | -8.615850e-47 |
| Msa0287690 | Msa1350710 | 0.928629 | 2.203422e-92 | -8.615850e-47 |
| Msa0287690 | Msa1360250 | 0.946171 | 7.675206e-105 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0287690 | MtrunA17_Chr2g0331501 | 97.297 | 555 | 15 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1118 |
| Msa0287690 | MtrunA17_Chr2g0279781 | 84.144 | 555 | 47 | 1 | 1 | 555 | 1 | 514 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0287690 | AT5G14050.1 | 62.014 | 566 | 184 | 10 | 1 | 555 | 1 | 546 | 0.0 | 671 |
Find 126 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAGATGCTTTGAATTT+TGG | 0.136326 | 2_3:-30863504 | None:intergenic |
| CTCTACTCCCCTCTTGAATT+TGG | 0.174548 | 2_3:+30862846 | Msa0287690:CDS |
| ATGGAACTGAACCGAATTAA+TGG | 0.250496 | 2_3:-30863405 | None:intergenic |
| TGAAATCCACTTCAGTATTC+AGG | 0.253259 | 2_3:-30864054 | None:intergenic |
| TAGCCAAAGTTAACAGATTA+AGG | 0.262384 | 2_3:+30863066 | Msa0287690:CDS |
| GACTGGGCACAGCTTGATTC+AGG | 0.267674 | 2_3:+30863182 | Msa0287690:CDS |
| CTTAACGTCATCCTCTCTTT+TGG | 0.282888 | 2_3:-30862682 | None:intergenic |
| AAGGCTAGAGTTGATAAAAT+TGG | 0.310494 | 2_3:+30863623 | Msa0287690:CDS |
| CCGAGAAGTCAGAATCTTCT+TGG | 0.315985 | 2_3:-30862965 | None:intergenic |
| TTAACAGATTAAGGAAGTTA+AGG | 0.316539 | 2_3:+30863075 | Msa0287690:CDS |
| TCCCCTCTTGAATTTGGAAA+TGG | 0.323398 | 2_3:+30862852 | Msa0287690:CDS |
| TACAATAGTGAGGAATTTCT+TGG | 0.340204 | 2_3:+30863998 | Msa0287690:CDS |
| CCAAGAAGATTCTGACTTCT+CGG | 0.345962 | 2_3:+30862965 | Msa0287690:CDS |
| CTTTGCGAAGAAAGCCGGTT+TGG | 0.353761 | 2_3:+30863009 | Msa0287690:CDS |
| TTCTAATGGTCCCATTAATT+CGG | 0.354772 | 2_3:+30863394 | Msa0287690:CDS |
| AGGTTATCAATGGTCTTGAT+AGG | 0.358287 | 2_3:-30864034 | None:intergenic |
| GGTCAGCTGCTTCTTGCTGC+TGG | 0.365476 | 2_3:+30863434 | Msa0287690:CDS |
| ACTTGTAGATGCAAACATTC+AGG | 0.369324 | 2_3:+30863367 | Msa0287690:CDS |
| TTTGAAAGAATCTAAGATTC+CGG | 0.381602 | 2_3:-30863463 | None:intergenic |
| GGGTCTCAAGTGATAATATC+TGG | 0.385058 | 2_3:+30863566 | Msa0287690:CDS |
| CCCCTCTTGAATTTGGAAAT+GGG | 0.395309 | 2_3:+30862853 | Msa0287690:CDS |
| TGGACTAAAATCAATACAAC+GGG | 0.404884 | 2_3:-30864209 | None:intergenic |
| CTTCCTTAATCTGTTAACTT+TGG | 0.410710 | 2_3:-30863069 | None:intergenic |
| TTTGCGAAGAAAGCCGGTTT+GGG | 0.414670 | 2_3:+30863010 | Msa0287690:CDS |
| AGATGGAAAGGAAGAACATT+TGG | 0.415307 | 2_3:+30862770 | Msa0287690:CDS |
| ATGGCTGTAGGAAACGCTTC+AGG | 0.416776 | 2_3:+30864244 | Msa0287690:CDS |
| GAGGACGAGAATGTGATATC+TGG | 0.419714 | 2_3:+30863104 | Msa0287690:CDS |
| TTATAGTCTTGATTTAGTTA+AGG | 0.420893 | 2_3:+30863604 | Msa0287690:CDS |
| TTCGAATGGGGCAATCTTCA+AGG | 0.424695 | 2_3:-30863523 | None:intergenic |
| ACAAAATCAAAGCAATTAGT+TGG | 0.426886 | 2_3:+30863752 | Msa0287690:CDS |
| ACAATAGTGAGGAATTTCTT+GGG | 0.430835 | 2_3:+30863999 | Msa0287690:CDS |
| CAAAAGAGAGGATGACGTTA+AGG | 0.431319 | 2_3:+30862683 | Msa0287690:CDS |
| TGGAACTGAACCGAATTAAT+GGG | 0.436701 | 2_3:-30863404 | None:intergenic |
| GAATTAATGGGACCATTAGA+AGG | 0.443632 | 2_3:-30863392 | None:intergenic |
| TCGGTTCAGTTCCATCGAAA+TGG | 0.445521 | 2_3:+30863413 | Msa0287690:CDS |
| TTCAGTATTCAGGTTATCAA+TGG | 0.445525 | 2_3:-30864044 | None:intergenic |
| AAGTAATGTTGTTGCGAGCC+GGG | 0.448192 | 2_3:+30863250 | Msa0287690:CDS |
| AACATTCAGGATCCTTCTAA+TGG | 0.448781 | 2_3:+30863380 | Msa0287690:CDS |
| TTCTAAAATGATAGCCTTTG+TGG | 0.449352 | 2_3:+30863700 | Msa0287690:CDS |
| AAATATTAGCAATCTGTTCA+AGG | 0.450551 | 2_3:+30864098 | Msa0287690:CDS |
| TCTTCCTCATCCACCCAAAC+CGG | 0.450796 | 2_3:-30863023 | None:intergenic |
| TTTGCAGCTGGTTCGGCTAG+TGG | 0.463183 | 2_3:+30863962 | Msa0287690:CDS |
| CTTAGATTCTTTCAAATCGA+TGG | 0.465769 | 2_3:+30863470 | Msa0287690:CDS |
| GTAGATGAAGGCTGTTTAAA+CGG | 0.466326 | 2_3:+30863905 | Msa0287690:CDS |
| GCTGCAAAATGTGTCCCTAC+TGG | 0.467974 | 2_3:-30863947 | None:intergenic |
| CAGATTAAGGAAGTTAAGGA+AGG | 0.470846 | 2_3:+30863079 | Msa0287690:CDS |
| ACTGACCGTTCTGCTGATAG+TGG | 0.477341 | 2_3:+30862930 | Msa0287690:CDS |
| TGTTGCGAGCCGGGGTTATG+AGG | 0.478638 | 2_3:+30863259 | Msa0287690:CDS |
| AAGCATCTTTCTTGCCCGAT+GGG | 0.479466 | 2_3:+30863546 | Msa0287690:CDS |
| GATGATGAATTGACAGATGA+TGG | 0.480610 | 2_3:+30863227 | Msa0287690:CDS |
| AGCTCAACCGAGGAACTGAC+TGG | 0.481203 | 2_3:+30863165 | Msa0287690:CDS |
| GAAGTAATGTTGTTGCGAGC+CGG | 0.483388 | 2_3:+30863249 | Msa0287690:CDS |
| GTGATGGCCATGTTTACCAT+TGG | 0.483908 | 2_3:+30863849 | Msa0287690:CDS |
| AAATTGGTCCGCTGTTGGAT+AGG | 0.484483 | 2_3:+30863639 | Msa0287690:CDS |
| GGAAATGGGGATAACGATGA+AGG | 0.486981 | 2_3:+30862867 | Msa0287690:CDS |
| AATTGGTCCGCTGTTGGATA+GGG | 0.491909 | 2_3:+30863640 | Msa0287690:CDS |
| CAGAGTATGTGTCAAGATTG+AGG | 0.492768 | 2_3:+30863129 | Msa0287690:CDS |
| ACGGTCAGTGAAGAACAAAT+TGG | 0.494840 | 2_3:-30862916 | None:intergenic |
| TGATGGCCATGTTTACCATT+GGG | 0.497623 | 2_3:+30863850 | Msa0287690:CDS |
| TCTTTCAAATCGATGGCAAA+CGG | 0.500797 | 2_3:+30863477 | Msa0287690:CDS |
| AAGGAAGTTAAGGAAGGAAG+AGG | 0.502686 | 2_3:+30863085 | Msa0287690:CDS |
| AAAGAGGAAGCTAGATGGAA+AGG | 0.505950 | 2_3:+30862758 | Msa0287690:CDS |
| TGATAAAATTGGTCCGCTGT+TGG | 0.506211 | 2_3:+30863634 | Msa0287690:CDS |
| GGAAGCCTTTGCAGCAGTCA+TGG | 0.506331 | 2_3:-30862895 | None:intergenic |
| AGAGTATGTGTCAAGATTGA+GGG | 0.513752 | 2_3:+30863130 | Msa0287690:CDS |
| TGATGCTTTGCGAAGAAAGC+CGG | 0.516338 | 2_3:+30863004 | Msa0287690:CDS |
| ATAGCCTTTGTGGGTGATGA+AGG | 0.525756 | 2_3:+30863710 | Msa0287690:CDS |
| CCCTACTGGAGAAGTACAAA+GGG | 0.526256 | 2_3:-30863933 | None:intergenic |
| AGCAGCTCAAAATTGTTGCC+AGG | 0.528190 | 2_3:+30863326 | Msa0287690:CDS |
| AAAGCCGGTTTGGGTGGATG+AGG | 0.539602 | 2_3:+30863019 | Msa0287690:CDS |
| TTTCTAATCTACTTTAGGCA+TGG | 0.540589 | 2_3:-30864300 | None:intergenic |
| TCTCAGAACAAATGAAGACT+TGG | 0.543934 | 2_3:+30863295 | Msa0287690:CDS |
| CCCTCTTGAATTTGGAAATG+GGG | 0.544010 | 2_3:+30862854 | Msa0287690:CDS |
| GAGCCGGGGTTATGAGGATC+TGG | 0.545404 | 2_3:+30863265 | Msa0287690:CDS |
| ACTGGGCACAGCTTGATTCA+GGG | 0.545660 | 2_3:+30863183 | Msa0287690:CDS |
| GGAAGCCATGACTGCTGCAA+AGG | 0.547123 | 2_3:+30862890 | Msa0287690:CDS |
| CCCCATTTCCAAATTCAAGA+GGG | 0.548968 | 2_3:-30862854 | None:intergenic |
| GTAAACATGGCCATCACCAC+CGG | 0.549474 | 2_3:-30863843 | None:intergenic |
| CAATACAACGGGGATAATGC+AGG | 0.553209 | 2_3:-30864198 | None:intergenic |
| TTCTTGCTGCTGGATTAGAC+CGG | 0.554524 | 2_3:+30863444 | Msa0287690:CDS |
| TGTGAATATTTACAATAGTG+AGG | 0.554925 | 2_3:+30863988 | Msa0287690:CDS |
| CAATAGTGAGGAATTTCTTG+GGG | 0.554998 | 2_3:+30864000 | Msa0287690:CDS |
| AAAGCATCTTTCTTGCCCGA+TGG | 0.557386 | 2_3:+30863545 | Msa0287690:CDS |
| GAAGATTCTGACTTCTCGGA+TGG | 0.559324 | 2_3:+30862969 | Msa0287690:CDS |
| TTGTTGAGCACCGGTGGTGA+TGG | 0.564654 | 2_3:+30863833 | Msa0287690:CDS |
| TCTAAAATGATAGCCTTTGT+GGG | 0.566464 | 2_3:+30863701 | Msa0287690:CDS |
| CCCTTTGTACTTCTCCAGTA+GGG | 0.569388 | 2_3:+30863933 | Msa0287690:CDS |
| GCGAAGAAAGCCGGTTTGGG+TGG | 0.571477 | 2_3:+30863013 | Msa0287690:CDS |
| GCCCTTTGTACTTCTCCAGT+AGG | 0.573251 | 2_3:+30863932 | Msa0287690:CDS |
| TGATAACCTGAATACTGAAG+TGG | 0.580415 | 2_3:+30864048 | Msa0287690:CDS |
| GGACAAAAGTTGTTGAGCAC+CGG | 0.580640 | 2_3:+30863824 | Msa0287690:CDS |
| ATTATCACTTGAGACCCATC+GGG | 0.584332 | 2_3:-30863560 | None:intergenic |
| TATTATCACTTGAGACCCAT+CGG | 0.587218 | 2_3:-30863561 | None:intergenic |
| GCTGTGCCCAGTCAGTTCCT+CGG | 0.588930 | 2_3:-30863172 | None:intergenic |
| GAAATGGGGATAACGATGAA+GGG | 0.589801 | 2_3:+30862868 | Msa0287690:CDS |
| CTTCAGTAAAAGCTAACGCA+CGG | 0.597212 | 2_3:-30863799 | None:intergenic |
| AGTAATGTTGTTGCGAGCCG+GGG | 0.597573 | 2_3:+30863251 | Msa0287690:CDS |
| GAAGCAGCTGACCATTTCGA+TGG | 0.604108 | 2_3:-30863424 | None:intergenic |
| TCCCCATTTCCAAATTCAAG+AGG | 0.605102 | 2_3:-30862855 | None:intergenic |
| TCAGATCCCAATGGTAAACA+TGG | 0.606421 | 2_3:-30863856 | None:intergenic |
| TTCGAGTATTCAATATGACC+TGG | 0.611892 | 2_3:-30863344 | None:intergenic |
| TTCAGTAAAAGCTAACGCAC+GGG | 0.612384 | 2_3:-30863798 | None:intergenic |
| TCCCTACTGGAGAAGTACAA+AGG | 0.621550 | 2_3:-30863934 | None:intergenic |
| CTGGACTAAAATCAATACAA+CGG | 0.621707 | 2_3:-30864210 | None:intergenic |
| ACCATTGGGATCTGAGAACA+AGG | 0.624102 | 2_3:+30863864 | Msa0287690:CDS |
| CCCATTTCCAAATTCAAGAG+GGG | 0.625050 | 2_3:-30862853 | None:intergenic |
| TAGAAATGAGACCAAAAGAG+AGG | 0.629102 | 2_3:+30862671 | Msa0287690:CDS |
| GCTCAACCGAGGAACTGACT+GGG | 0.636934 | 2_3:+30863166 | Msa0287690:CDS |
| CCAGTTAGAGAAAACAGTGT+AGG | 0.639938 | 2_3:-30864158 | None:intergenic |
| GTTGGTACTCTGAAGATGAA+CGG | 0.640176 | 2_3:+30863770 | Msa0287690:CDS |
| TTAGAGAAAACAGTGTAGGA+TGG | 0.640295 | 2_3:-30864154 | None:intergenic |
| CATCCAGATCCTCATAACCC+CGG | 0.640892 | 2_3:-30863268 | None:intergenic |
| TGCAGGCTCGCATTTGAACG+CGG | 0.645712 | 2_3:-30864181 | None:intergenic |
| ACAGCCATAAAACCACCACC+TGG | 0.646807 | 2_3:-30864229 | None:intergenic |
| ATAACCTTCATCACCCACAA+AGG | 0.647464 | 2_3:-30863714 | None:intergenic |
| AAATGGGGATAACGATGAAG+GGG | 0.648646 | 2_3:+30862869 | Msa0287690:CDS |
| CAAAAGTTGTTGAGCACCGG+TGG | 0.649375 | 2_3:+30863827 | Msa0287690:CDS |
| AATAGTGAGGAATTTCTTGG+GGG | 0.659821 | 2_3:+30864001 | Msa0287690:CDS |
| ATGCACAAAGGTGTAGATGA+AGG | 0.661644 | 2_3:+30863893 | Msa0287690:CDS |
| TTCTCTTCCCTATCCAACAG+CGG | 0.664935 | 2_3:-30863647 | None:intergenic |
| AATCTTCTTGGTAAACAGTG+AGG | 0.688434 | 2_3:-30862953 | None:intergenic |
| TGAGGCCACTATCAGCAGAA+CGG | 0.695939 | 2_3:-30862935 | None:intergenic |
| CAACATGTGAAGCTCAACCG+AGG | 0.705882 | 2_3:+30863155 | Msa0287690:CDS |
| ACAAGGACTTGTATGCACAA+AGG | 0.714733 | 2_3:+30863881 | Msa0287690:CDS |
| TCCTTGTTCTCAGATCCCAA+TGG | 0.719029 | 2_3:-30863865 | None:intergenic |
| GGACTAAAATCAATACAACG+GGG | 0.796660 | 2_3:-30864208 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | chr2_3:30863604-30863623 | Msa0287690:CDS | 20.0% |
| !!! | TTATAGTCTTGATTTAGTTA+AGG | + | chr2_3:30863604-30863623 | Msa0287690:CDS | 20.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | + | chr2_3:30862819-30862838 | Msa0287690:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | + | chr2_3:30862820-30862839 | Msa0287690:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | + | chr2_3:30863075-30863094 | Msa0287690:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | - | chr2_3:30863466-30863485 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | + | chr2_3:30863724-30863743 | Msa0287690:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | + | chr2_3:30863752-30863771 | Msa0287690:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | + | chr2_3:30863988-30864007 | Msa0287690:CDS | 25.0% |
| ! | AAATATTAGCAATCTGTTCA+AGG | + | chr2_3:30864098-30864117 | Msa0287690:CDS | 25.0% |
| !! | AAACTTGAAAGCTTTTTGTT+TGG | + | chr2_3:30862819-30862838 | Msa0287690:CDS | 25.0% |
| !!! | AACTTGAAAGCTTTTTGTTT+GGG | + | chr2_3:30862820-30862839 | Msa0287690:CDS | 25.0% |
| ! | TTAACAGATTAAGGAAGTTA+AGG | + | chr2_3:30863075-30863094 | Msa0287690:CDS | 25.0% |
| !! | TTTGAAAGAATCTAAGATTC+CGG | - | chr2_3:30863466-30863485 | None:intergenic | 25.0% |
| !! | TGATGAAGGTTATATTTTAC+TGG | + | chr2_3:30863724-30863743 | Msa0287690:CDS | 25.0% |
| ! | ACAAAATCAAAGCAATTAGT+TGG | + | chr2_3:30863752-30863771 | Msa0287690:CDS | 25.0% |
| ! | TGTGAATATTTACAATAGTG+AGG | + | chr2_3:30863988-30864007 | Msa0287690:CDS | 25.0% |
| ! | AAATATTAGCAATCTGTTCA+AGG | + | chr2_3:30864098-30864117 | Msa0287690:CDS | 25.0% |
| AAGGAAAAAGAAGTTGAAGA+TGG | + | chr2_3:30862702-30862721 | Msa0287690:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | + | chr2_3:30863066-30863085 | Msa0287690:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | - | chr2_3:30863072-30863091 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | + | chr2_3:30863394-30863413 | Msa0287690:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | + | chr2_3:30863470-30863489 | Msa0287690:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | - | chr2_3:30863507-30863526 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | - | chr2_3:30863539-30863558 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | + | chr2_3:30863623-30863642 | Msa0287690:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | + | chr2_3:30863667-30863686 | Msa0287690:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | - | chr2_3:30863698-30863717 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | + | chr2_3:30863700-30863719 | Msa0287690:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | + | chr2_3:30863701-30863720 | Msa0287690:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | + | chr2_3:30863998-30864017 | Msa0287690:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | + | chr2_3:30863999-30864018 | Msa0287690:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | - | chr2_3:30864047-30864066 | None:intergenic | 30.0% |
| TGGACTAAAATCAATACAAC+GGG | - | chr2_3:30864212-30864231 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | - | chr2_3:30864213-30864232 | None:intergenic | 30.0% | |
| AAGGAAAAAGAAGTTGAAGA+TGG | + | chr2_3:30862702-30862721 | Msa0287690:CDS | 30.0% | |
| TAGCCAAAGTTAACAGATTA+AGG | + | chr2_3:30863066-30863085 | Msa0287690:CDS | 30.0% | |
| CTTCCTTAATCTGTTAACTT+TGG | - | chr2_3:30863072-30863091 | None:intergenic | 30.0% | |
| TTCTAATGGTCCCATTAATT+CGG | + | chr2_3:30863394-30863413 | Msa0287690:CDS | 30.0% | |
| CTTAGATTCTTTCAAATCGA+TGG | + | chr2_3:30863470-30863489 | Msa0287690:CDS | 30.0% | |
| !! | AAGGAAGATGCTTTGAATTT+TGG | - | chr2_3:30863507-30863526 | None:intergenic | 30.0% |
| ! | AAGAAAGATGCTTTTCGAAT+GGG | - | chr2_3:30863539-30863558 | None:intergenic | 30.0% |
| !! | AAGGCTAGAGTTGATAAAAT+TGG | + | chr2_3:30863623-30863642 | Msa0287690:CDS | 30.0% |
| !!! | GAAGAGTATTGAAGTTTTTG+AGG | + | chr2_3:30863667-30863686 | Msa0287690:CDS | 30.0% |
| !!! | AAGGCTATCATTTTAGAATC+AGG | - | chr2_3:30863698-30863717 | None:intergenic | 30.0% |
| !! | TTCTAAAATGATAGCCTTTG+TGG | + | chr2_3:30863700-30863719 | Msa0287690:CDS | 30.0% |
| ! | TCTAAAATGATAGCCTTTGT+GGG | + | chr2_3:30863701-30863720 | Msa0287690:CDS | 30.0% |
| TACAATAGTGAGGAATTTCT+TGG | + | chr2_3:30863998-30864017 | Msa0287690:CDS | 30.0% | |
| ACAATAGTGAGGAATTTCTT+GGG | + | chr2_3:30863999-30864018 | Msa0287690:CDS | 30.0% | |
| ! | TTCAGTATTCAGGTTATCAA+TGG | - | chr2_3:30864047-30864066 | None:intergenic | 30.0% |
| TGGACTAAAATCAATACAAC+GGG | - | chr2_3:30864212-30864231 | None:intergenic | 30.0% | |
| CTGGACTAAAATCAATACAA+CGG | - | chr2_3:30864213-30864232 | None:intergenic | 30.0% | |
| TAGAAATGAGACCAAAAGAG+AGG | + | chr2_3:30862671-30862690 | Msa0287690:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | + | chr2_3:30862742-30862761 | Msa0287690:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | - | chr2_3:30862748-30862767 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | + | chr2_3:30862770-30862789 | Msa0287690:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | - | chr2_3:30862956-30862975 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | + | chr2_3:30863079-30863098 | Msa0287690:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | chr2_3:30863130-30863149 | Msa0287690:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | + | chr2_3:30863227-30863246 | Msa0287690:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | + | chr2_3:30863295-30863314 | Msa0287690:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | - | chr2_3:30863347-30863366 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | + | chr2_3:30863367-30863386 | Msa0287690:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | + | chr2_3:30863380-30863399 | Msa0287690:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | - | chr2_3:30863395-30863414 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | - | chr2_3:30863407-30863426 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | - | chr2_3:30863408-30863427 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | + | chr2_3:30863477-30863496 | Msa0287690:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | - | chr2_3:30863538-30863557 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | - | chr2_3:30863540-30863559 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | - | chr2_3:30863564-30863583 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | + | chr2_3:30863905-30863924 | Msa0287690:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | + | chr2_3:30864000-30864019 | Msa0287690:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | + | chr2_3:30864001-30864020 | Msa0287690:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | - | chr2_3:30864037-30864056 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | + | chr2_3:30864048-30864067 | Msa0287690:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | - | chr2_3:30864057-30864076 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | chr2_3:30864157-30864176 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | - | chr2_3:30864211-30864230 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | + | chr2_3:30864211-30864230 | Msa0287690:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | + | chr2_3:30864214-30864233 | Msa0287690:CDS | 35.0% |
| TAGAAATGAGACCAAAAGAG+AGG | + | chr2_3:30862671-30862690 | Msa0287690:CDS | 35.0% | |
| ATACCGTAGAAGTGAAAAAG+AGG | + | chr2_3:30862742-30862761 | Msa0287690:CDS | 35.0% | |
| !! | CTTCCTCTTTTTCACTTCTA+CGG | - | chr2_3:30862748-30862767 | None:intergenic | 35.0% |
| AGATGGAAAGGAAGAACATT+TGG | + | chr2_3:30862770-30862789 | Msa0287690:CDS | 35.0% | |
| AATCTTCTTGGTAAACAGTG+AGG | - | chr2_3:30862956-30862975 | None:intergenic | 35.0% | |
| CAGATTAAGGAAGTTAAGGA+AGG | + | chr2_3:30863079-30863098 | Msa0287690:CDS | 35.0% | |
| AGAGTATGTGTCAAGATTGA+GGG | + | chr2_3:30863130-30863149 | Msa0287690:CDS | 35.0% | |
| GATGATGAATTGACAGATGA+TGG | + | chr2_3:30863227-30863246 | Msa0287690:CDS | 35.0% | |
| TCTCAGAACAAATGAAGACT+TGG | + | chr2_3:30863295-30863314 | Msa0287690:CDS | 35.0% | |
| TTCGAGTATTCAATATGACC+TGG | - | chr2_3:30863347-30863366 | None:intergenic | 35.0% | |
| ACTTGTAGATGCAAACATTC+AGG | + | chr2_3:30863367-30863386 | Msa0287690:CDS | 35.0% | |
| AACATTCAGGATCCTTCTAA+TGG | + | chr2_3:30863380-30863399 | Msa0287690:CDS | 35.0% | |
| GAATTAATGGGACCATTAGA+AGG | - | chr2_3:30863395-30863414 | None:intergenic | 35.0% | |
| TGGAACTGAACCGAATTAAT+GGG | - | chr2_3:30863407-30863426 | None:intergenic | 35.0% | |
| ATGGAACTGAACCGAATTAA+TGG | - | chr2_3:30863408-30863427 | None:intergenic | 35.0% | |
| TCTTTCAAATCGATGGCAAA+CGG | + | chr2_3:30863477-30863496 | Msa0287690:CDS | 35.0% | |
| ! | AGAAAGATGCTTTTCGAATG+GGG | - | chr2_3:30863538-30863557 | None:intergenic | 35.0% |
| ! | CAAGAAAGATGCTTTTCGAA+TGG | - | chr2_3:30863540-30863559 | None:intergenic | 35.0% |
| TATTATCACTTGAGACCCAT+CGG | - | chr2_3:30863564-30863583 | None:intergenic | 35.0% | |
| GTAGATGAAGGCTGTTTAAA+CGG | + | chr2_3:30863905-30863924 | Msa0287690:CDS | 35.0% | |
| CAATAGTGAGGAATTTCTTG+GGG | + | chr2_3:30864000-30864019 | Msa0287690:CDS | 35.0% | |
| AATAGTGAGGAATTTCTTGG+GGG | + | chr2_3:30864001-30864020 | Msa0287690:CDS | 35.0% | |
| ! | AGGTTATCAATGGTCTTGAT+AGG | - | chr2_3:30864037-30864056 | None:intergenic | 35.0% |
| TGATAACCTGAATACTGAAG+TGG | + | chr2_3:30864048-30864067 | Msa0287690:CDS | 35.0% | |
| TGAAATCCACTTCAGTATTC+AGG | - | chr2_3:30864057-30864076 | None:intergenic | 35.0% | |
| TTAGAGAAAACAGTGTAGGA+TGG | - | chr2_3:30864157-30864176 | None:intergenic | 35.0% | |
| GGACTAAAATCAATACAACG+GGG | - | chr2_3:30864211-30864230 | None:intergenic | 35.0% | |
| !!! | CGTTGTATTGATTTTAGTCC+AGG | + | chr2_3:30864211-30864230 | Msa0287690:CDS | 35.0% |
| !!! | TGTATTGATTTTAGTCCAGG+TGG | + | chr2_3:30864214-30864233 | Msa0287690:CDS | 35.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | - | chr2_3:30862685-30862704 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | + | chr2_3:30862683-30862702 | Msa0287690:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | + | chr2_3:30862753-30862772 | Msa0287690:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | chr2_3:30862758-30862777 | Msa0287690:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | + | chr2_3:30862852-30862871 | Msa0287690:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | - | chr2_3:30862856-30862875 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | + | chr2_3:30862853-30862872 | Msa0287690:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | - | chr2_3:30862857-30862876 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | + | chr2_3:30862854-30862873 | Msa0287690:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | - | chr2_3:30862858-30862877 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | + | chr2_3:30862868-30862887 | Msa0287690:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | + | chr2_3:30862869-30862888 | Msa0287690:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | - | chr2_3:30862919-30862938 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | + | chr2_3:30862965-30862984 | Msa0287690:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | + | chr2_3:30863085-30863104 | Msa0287690:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | chr2_3:30863129-30863148 | Msa0287690:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | + | chr2_3:30863193-30863212 | Msa0287690:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | chr2_3:30863197-30863216 | Msa0287690:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | - | chr2_3:30863563-30863582 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | + | chr2_3:30863566-30863585 | Msa0287690:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | + | chr2_3:30863634-30863653 | Msa0287690:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | - | chr2_3:30863717-30863736 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | chr2_3:30863770-30863789 | Msa0287690:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | - | chr2_3:30863801-30863820 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | - | chr2_3:30863802-30863821 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | + | chr2_3:30863803-30863822 | Msa0287690:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | + | chr2_3:30863850-30863869 | Msa0287690:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | - | chr2_3:30863859-30863878 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | + | chr2_3:30863881-30863900 | Msa0287690:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | + | chr2_3:30863893-30863912 | Msa0287690:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | - | chr2_3:30864161-30864180 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | chr2_3:30864158-30864177 | Msa0287690:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | + | chr2_3:30864217-30864236 | Msa0287690:CDS | 40.0% |
| ! | CTTAACGTCATCCTCTCTTT+TGG | - | chr2_3:30862685-30862704 | None:intergenic | 40.0% |
| CAAAAGAGAGGATGACGTTA+AGG | + | chr2_3:30862683-30862702 | Msa0287690:CDS | 40.0% | |
| GTGAAAAAGAGGAAGCTAGA+TGG | + | chr2_3:30862753-30862772 | Msa0287690:CDS | 40.0% | |
| AAAGAGGAAGCTAGATGGAA+AGG | + | chr2_3:30862758-30862777 | Msa0287690:CDS | 40.0% | |
| TCCCCTCTTGAATTTGGAAA+TGG | + | chr2_3:30862852-30862871 | Msa0287690:CDS | 40.0% | |
| CCCATTTCCAAATTCAAGAG+GGG | - | chr2_3:30862856-30862875 | None:intergenic | 40.0% | |
| CCCCTCTTGAATTTGGAAAT+GGG | + | chr2_3:30862853-30862872 | Msa0287690:CDS | 40.0% | |
| CCCCATTTCCAAATTCAAGA+GGG | - | chr2_3:30862857-30862876 | None:intergenic | 40.0% | |
| CCCTCTTGAATTTGGAAATG+GGG | + | chr2_3:30862854-30862873 | Msa0287690:CDS | 40.0% | |
| TCCCCATTTCCAAATTCAAG+AGG | - | chr2_3:30862858-30862877 | None:intergenic | 40.0% | |
| GAAATGGGGATAACGATGAA+GGG | + | chr2_3:30862868-30862887 | Msa0287690:CDS | 40.0% | |
| AAATGGGGATAACGATGAAG+GGG | + | chr2_3:30862869-30862888 | Msa0287690:CDS | 40.0% | |
| ACGGTCAGTGAAGAACAAAT+TGG | - | chr2_3:30862919-30862938 | None:intergenic | 40.0% | |
| CCAAGAAGATTCTGACTTCT+CGG | + | chr2_3:30862965-30862984 | Msa0287690:CDS | 40.0% | |
| AAGGAAGTTAAGGAAGGAAG+AGG | + | chr2_3:30863085-30863104 | Msa0287690:CDS | 40.0% | |
| CAGAGTATGTGTCAAGATTG+AGG | + | chr2_3:30863129-30863148 | Msa0287690:CDS | 40.0% | |
| GCTTGATTCAGGGTCAAAAA+TGG | + | chr2_3:30863193-30863212 | Msa0287690:CDS | 40.0% | |
| GATTCAGGGTCAAAAATGGA+TGG | + | chr2_3:30863197-30863216 | Msa0287690:CDS | 40.0% | |
| ATTATCACTTGAGACCCATC+GGG | - | chr2_3:30863563-30863582 | None:intergenic | 40.0% | |
| GGGTCTCAAGTGATAATATC+TGG | + | chr2_3:30863566-30863585 | Msa0287690:CDS | 40.0% | |
| TGATAAAATTGGTCCGCTGT+TGG | + | chr2_3:30863634-30863653 | Msa0287690:CDS | 40.0% | |
| ATAACCTTCATCACCCACAA+AGG | - | chr2_3:30863717-30863736 | None:intergenic | 40.0% | |
| ! | GTTGGTACTCTGAAGATGAA+CGG | + | chr2_3:30863770-30863789 | Msa0287690:CDS | 40.0% |
| TTCAGTAAAAGCTAACGCAC+GGG | - | chr2_3:30863801-30863820 | None:intergenic | 40.0% | |
| CTTCAGTAAAAGCTAACGCA+CGG | - | chr2_3:30863802-30863821 | None:intergenic | 40.0% | |
| !!! | GCGTTAGCTTTTACTGAAGA+TGG | + | chr2_3:30863803-30863822 | Msa0287690:CDS | 40.0% |
| TGATGGCCATGTTTACCATT+GGG | + | chr2_3:30863850-30863869 | Msa0287690:CDS | 40.0% | |
| TCAGATCCCAATGGTAAACA+TGG | - | chr2_3:30863859-30863878 | None:intergenic | 40.0% | |
| ACAAGGACTTGTATGCACAA+AGG | + | chr2_3:30863881-30863900 | Msa0287690:CDS | 40.0% | |
| ! | ATGCACAAAGGTGTAGATGA+AGG | + | chr2_3:30863893-30863912 | Msa0287690:CDS | 40.0% |
| CCAGTTAGAGAAAACAGTGT+AGG | - | chr2_3:30864161-30864180 | None:intergenic | 40.0% | |
| ! | CCTACACTGTTTTCTCTAAC+TGG | + | chr2_3:30864158-30864177 | Msa0287690:CDS | 40.0% |
| !! | ATTGATTTTAGTCCAGGTGG+TGG | + | chr2_3:30864217-30864236 | Msa0287690:CDS | 40.0% |
| CTCTACTCCCCTCTTGAATT+TGG | + | chr2_3:30862846-30862865 | Msa0287690:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | + | chr2_3:30862867-30862886 | Msa0287690:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | - | chr2_3:30862968-30862987 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | + | chr2_3:30862969-30862988 | Msa0287690:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | + | chr2_3:30863004-30863023 | Msa0287690:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | + | chr2_3:30863010-30863029 | Msa0287690:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | + | chr2_3:30863104-30863123 | Msa0287690:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | + | chr2_3:30863249-30863268 | Msa0287690:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | + | chr2_3:30863250-30863269 | Msa0287690:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | + | chr2_3:30863326-30863345 | Msa0287690:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | + | chr2_3:30863413-30863432 | Msa0287690:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | chr2_3:30863444-30863463 | Msa0287690:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | - | chr2_3:30863526-30863545 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | chr2_3:30863545-30863564 | Msa0287690:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | chr2_3:30863546-30863565 | Msa0287690:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | + | chr2_3:30863639-30863658 | Msa0287690:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | + | chr2_3:30863640-30863659 | Msa0287690:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | - | chr2_3:30863650-30863669 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | + | chr2_3:30863710-30863729 | Msa0287690:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | + | chr2_3:30863824-30863843 | Msa0287690:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | + | chr2_3:30863849-30863868 | Msa0287690:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | + | chr2_3:30863864-30863883 | Msa0287690:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | chr2_3:30863868-30863887 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | - | chr2_3:30863936-30863955 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | + | chr2_3:30863933-30863952 | Msa0287690:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | - | chr2_3:30863937-30863956 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | + | chr2_3:30863955-30863974 | Msa0287690:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | - | chr2_3:30864201-30864220 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | + | chr2_3:30864225-30864244 | Msa0287690:CDS | 45.0% |
| CTCTACTCCCCTCTTGAATT+TGG | + | chr2_3:30862846-30862865 | Msa0287690:CDS | 45.0% | |
| GGAAATGGGGATAACGATGA+AGG | + | chr2_3:30862867-30862886 | Msa0287690:CDS | 45.0% | |
| CCGAGAAGTCAGAATCTTCT+TGG | - | chr2_3:30862968-30862987 | None:intergenic | 45.0% | |
| GAAGATTCTGACTTCTCGGA+TGG | + | chr2_3:30862969-30862988 | Msa0287690:CDS | 45.0% | |
| TGATGCTTTGCGAAGAAAGC+CGG | + | chr2_3:30863004-30863023 | Msa0287690:CDS | 45.0% | |
| ! | TTTGCGAAGAAAGCCGGTTT+GGG | + | chr2_3:30863010-30863029 | Msa0287690:CDS | 45.0% |
| GAGGACGAGAATGTGATATC+TGG | + | chr2_3:30863104-30863123 | Msa0287690:CDS | 45.0% | |
| GAAGTAATGTTGTTGCGAGC+CGG | + | chr2_3:30863249-30863268 | Msa0287690:CDS | 45.0% | |
| AAGTAATGTTGTTGCGAGCC+GGG | + | chr2_3:30863250-30863269 | Msa0287690:CDS | 45.0% | |
| AGCAGCTCAAAATTGTTGCC+AGG | + | chr2_3:30863326-30863345 | Msa0287690:CDS | 45.0% | |
| TCGGTTCAGTTCCATCGAAA+TGG | + | chr2_3:30863413-30863432 | Msa0287690:CDS | 45.0% | |
| ! | TTCTTGCTGCTGGATTAGAC+CGG | + | chr2_3:30863444-30863463 | Msa0287690:CDS | 45.0% |
| TTCGAATGGGGCAATCTTCA+AGG | - | chr2_3:30863526-30863545 | None:intergenic | 45.0% | |
| ! | AAAGCATCTTTCTTGCCCGA+TGG | + | chr2_3:30863545-30863564 | Msa0287690:CDS | 45.0% |
| AAGCATCTTTCTTGCCCGAT+GGG | + | chr2_3:30863546-30863565 | Msa0287690:CDS | 45.0% | |
| AAATTGGTCCGCTGTTGGAT+AGG | + | chr2_3:30863639-30863658 | Msa0287690:CDS | 45.0% | |
| AATTGGTCCGCTGTTGGATA+GGG | + | chr2_3:30863640-30863659 | Msa0287690:CDS | 45.0% | |
| TTCTCTTCCCTATCCAACAG+CGG | - | chr2_3:30863650-30863669 | None:intergenic | 45.0% | |
| ATAGCCTTTGTGGGTGATGA+AGG | + | chr2_3:30863710-30863729 | Msa0287690:CDS | 45.0% | |
| GGACAAAAGTTGTTGAGCAC+CGG | + | chr2_3:30863824-30863843 | Msa0287690:CDS | 45.0% | |
| GTGATGGCCATGTTTACCAT+TGG | + | chr2_3:30863849-30863868 | Msa0287690:CDS | 45.0% | |
| ACCATTGGGATCTGAGAACA+AGG | + | chr2_3:30863864-30863883 | Msa0287690:CDS | 45.0% | |
| TCCTTGTTCTCAGATCCCAA+TGG | - | chr2_3:30863868-30863887 | None:intergenic | 45.0% | |
| ! | CCCTACTGGAGAAGTACAAA+GGG | - | chr2_3:30863936-30863955 | None:intergenic | 45.0% |
| CCCTTTGTACTTCTCCAGTA+GGG | + | chr2_3:30863933-30863952 | Msa0287690:CDS | 45.0% | |
| ! | TCCCTACTGGAGAAGTACAA+AGG | - | chr2_3:30863937-30863956 | None:intergenic | 45.0% |
| ! | GACACATTTTGCAGCTGGTT+CGG | + | chr2_3:30863955-30863974 | Msa0287690:CDS | 45.0% |
| CAATACAACGGGGATAATGC+AGG | - | chr2_3:30864201-30864220 | None:intergenic | 45.0% | |
| !! | TAGTCCAGGTGGTGGTTTTA+TGG | + | chr2_3:30864225-30864244 | Msa0287690:CDS | 45.0% |
| ACTGACCGTTCTGCTGATAG+TGG | + | chr2_3:30862930-30862949 | Msa0287690:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | - | chr2_3:30862938-30862957 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | + | chr2_3:30863009-30863028 | Msa0287690:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | - | chr2_3:30863026-30863045 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | + | chr2_3:30863155-30863174 | Msa0287690:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | + | chr2_3:30863183-30863202 | Msa0287690:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | + | chr2_3:30863251-30863270 | Msa0287690:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | - | chr2_3:30863271-30863290 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | chr2_3:30863427-30863446 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | + | chr2_3:30863827-30863846 | Msa0287690:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | - | chr2_3:30863846-30863865 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | + | chr2_3:30863932-30863951 | Msa0287690:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | - | chr2_3:30863950-30863969 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | chr2_3:30863950-30863969 | Msa0287690:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | - | chr2_3:30864232-30864251 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | chr2_3:30864232-30864251 | Msa0287690:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | + | chr2_3:30864244-30864263 | Msa0287690:CDS | 50.0% | |
| ACTGACCGTTCTGCTGATAG+TGG | + | chr2_3:30862930-30862949 | Msa0287690:CDS | 50.0% | |
| TGAGGCCACTATCAGCAGAA+CGG | - | chr2_3:30862938-30862957 | None:intergenic | 50.0% | |
| CTTTGCGAAGAAAGCCGGTT+TGG | + | chr2_3:30863009-30863028 | Msa0287690:CDS | 50.0% | |
| TCTTCCTCATCCACCCAAAC+CGG | - | chr2_3:30863026-30863045 | None:intergenic | 50.0% | |
| CAACATGTGAAGCTCAACCG+AGG | + | chr2_3:30863155-30863174 | Msa0287690:CDS | 50.0% | |
| ACTGGGCACAGCTTGATTCA+GGG | + | chr2_3:30863183-30863202 | Msa0287690:CDS | 50.0% | |
| AGTAATGTTGTTGCGAGCCG+GGG | + | chr2_3:30863251-30863270 | Msa0287690:CDS | 50.0% | |
| CATCCAGATCCTCATAACCC+CGG | - | chr2_3:30863271-30863290 | None:intergenic | 50.0% | |
| GAAGCAGCTGACCATTTCGA+TGG | - | chr2_3:30863427-30863446 | None:intergenic | 50.0% | |
| !! | CAAAAGTTGTTGAGCACCGG+TGG | + | chr2_3:30863827-30863846 | Msa0287690:CDS | 50.0% |
| GTAAACATGGCCATCACCAC+CGG | - | chr2_3:30863846-30863865 | None:intergenic | 50.0% | |
| GCCCTTTGTACTTCTCCAGT+AGG | + | chr2_3:30863932-30863951 | Msa0287690:CDS | 50.0% | |
| GCTGCAAAATGTGTCCCTAC+TGG | - | chr2_3:30863950-30863969 | None:intergenic | 50.0% | |
| ! | GTAGGGACACATTTTGCAGC+TGG | + | chr2_3:30863950-30863969 | Msa0287690:CDS | 50.0% |
| ACAGCCATAAAACCACCACC+TGG | - | chr2_3:30864232-30864251 | None:intergenic | 50.0% | |
| !!! | GGTGGTGGTTTTATGGCTGT+AGG | + | chr2_3:30864232-30864251 | Msa0287690:CDS | 50.0% |
| ATGGCTGTAGGAAACGCTTC+AGG | + | chr2_3:30864244-30864263 | Msa0287690:CDS | 50.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | + | chr2_3:30862890-30862909 | Msa0287690:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | - | chr2_3:30862898-30862917 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | + | chr2_3:30863019-30863038 | Msa0287690:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | + | chr2_3:30863165-30863184 | Msa0287690:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | chr2_3:30863166-30863185 | Msa0287690:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | + | chr2_3:30863182-30863201 | Msa0287690:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | + | chr2_3:30863833-30863852 | Msa0287690:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | + | chr2_3:30863962-30863981 | Msa0287690:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | chr2_3:30864184-30864203 | None:intergenic | 55.0% | |
| GGAAGCCATGACTGCTGCAA+AGG | + | chr2_3:30862890-30862909 | Msa0287690:CDS | 55.0% | |
| GGAAGCCTTTGCAGCAGTCA+TGG | - | chr2_3:30862898-30862917 | None:intergenic | 55.0% | |
| !! | AAAGCCGGTTTGGGTGGATG+AGG | + | chr2_3:30863019-30863038 | Msa0287690:CDS | 55.0% |
| AGCTCAACCGAGGAACTGAC+TGG | + | chr2_3:30863165-30863184 | Msa0287690:CDS | 55.0% | |
| GCTCAACCGAGGAACTGACT+GGG | + | chr2_3:30863166-30863185 | Msa0287690:CDS | 55.0% | |
| GACTGGGCACAGCTTGATTC+AGG | + | chr2_3:30863182-30863201 | Msa0287690:CDS | 55.0% | |
| !! | TTGTTGAGCACCGGTGGTGA+TGG | + | chr2_3:30863833-30863852 | Msa0287690:CDS | 55.0% |
| !! | TTTGCAGCTGGTTCGGCTAG+TGG | + | chr2_3:30863962-30863981 | Msa0287690:CDS | 55.0% |
| TGCAGGCTCGCATTTGAACG+CGG | - | chr2_3:30864184-30864203 | None:intergenic | 55.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | + | chr2_3:30863013-30863032 | Msa0287690:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | - | chr2_3:30863175-30863194 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | + | chr2_3:30863259-30863278 | Msa0287690:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | + | chr2_3:30863265-30863284 | Msa0287690:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | chr2_3:30863434-30863453 | Msa0287690:CDS | 60.0% | |
| !! | GCGAAGAAAGCCGGTTTGGG+TGG | + | chr2_3:30863013-30863032 | Msa0287690:CDS | 60.0% |
| GCTGTGCCCAGTCAGTTCCT+CGG | - | chr2_3:30863175-30863194 | None:intergenic | 60.0% | |
| TGTTGCGAGCCGGGGTTATG+AGG | + | chr2_3:30863259-30863278 | Msa0287690:CDS | 60.0% | |
| GAGCCGGGGTTATGAGGATC+TGG | + | chr2_3:30863265-30863284 | Msa0287690:CDS | 60.0% | |
| GGTCAGCTGCTTCTTGCTGC+TGG | + | chr2_3:30863434-30863453 | Msa0287690:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 30862642 | 30864309 | 30862642 | ID=Msa0287690;Name=Msa0287690 |
| chr2_3 | mRNA | 30862642 | 30864309 | 30862642 | ID=Msa0287690-mRNA-1;Parent=Msa0287690;Name=Msa0287690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|555 |
| chr2_3 | exon | 30862642 | 30864309 | 30862642 | ID=Msa0287690-mRNA-1:exon:10557;Parent=Msa0287690-mRNA-1 |
| chr2_3 | CDS | 30862642 | 30864309 | 30862642 | ID=Msa0287690-mRNA-1:cds;Parent=Msa0287690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
