Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364630 | XP_039683647.1 | 84.279 | 458 | 12 | 3 | 1 | 398 | 1 | 458 | 0.0 | 756 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364630 | sp|Q9LZV3|MAN6_ARATH | 55.000 | 460 | 128 | 7 | 3 | 398 | 4 | 448 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364630 | A0A396H2J1 | 84.279 | 458 | 12 | 3 | 1 | 398 | 1 | 458 | 0.0 | 756 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074640 | Msa1364630 | 0.803317 | 3.693320e-49 | -8.615850e-47 |
| Msa1111690 | Msa1364630 | 0.887849 | 9.941545e-73 | -8.615850e-47 |
| Msa1154150 | Msa1364630 | 0.834692 | 2.588300e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364630 | MtrunA17_Chr7g0245051 | 84.279 | 458 | 12 | 3 | 1 | 398 | 1 | 458 | 0.0 | 756 |
| Msa1364630 | MtrunA17_Chr7g0245101 | 82.135 | 459 | 21 | 4 | 1 | 398 | 1 | 459 | 0.0 | 733 |
| Msa1364630 | MtrunA17_Chr8g0334501 | 66.520 | 454 | 82 | 6 | 8 | 397 | 13 | 460 | 0.0 | 596 |
| Msa1364630 | MtrunA17_Chr5g0404601 | 41.775 | 383 | 160 | 5 | 59 | 380 | 31 | 411 | 6.09e-100 | 304 |
| Msa1364630 | MtrunA17_Chr4g0020521 | 39.050 | 379 | 168 | 4 | 60 | 378 | 35 | 410 | 8.09e-99 | 300 |
| Msa1364630 | MtrunA17_Chr1g0193531 | 40.701 | 371 | 157 | 5 | 59 | 369 | 29 | 396 | 3.84e-95 | 290 |
| Msa1364630 | MtrunA17_Chr1g0193611 | 38.814 | 371 | 165 | 4 | 59 | 369 | 32 | 400 | 9.70e-94 | 286 |
| Msa1364630 | MtrunA17_Chr1g0193551 | 41.019 | 373 | 152 | 7 | 59 | 369 | 35 | 401 | 1.47e-92 | 284 |
| Msa1364630 | MtrunA17_Chr1g0193601 | 38.874 | 373 | 162 | 5 | 59 | 369 | 32 | 400 | 1.70e-91 | 281 |
| Msa1364630 | MtrunA17_Chr3g0141751 | 38.482 | 382 | 166 | 8 | 49 | 368 | 17 | 391 | 2.44e-89 | 276 |
| Msa1364630 | MtrunA17_Chr7g0271511 | 39.623 | 371 | 158 | 6 | 59 | 369 | 62 | 426 | 2.65e-89 | 276 |
| Msa1364630 | MtrunA17_Chr4g0040121 | 39.005 | 382 | 171 | 5 | 53 | 372 | 33 | 414 | 1.63e-87 | 271 |
| Msa1364630 | MtrunA17_Chr2g0324441 | 37.368 | 380 | 175 | 4 | 53 | 369 | 34 | 413 | 7.17e-87 | 270 |
| Msa1364630 | MtrunA17_Chr1g0193541 | 35.695 | 367 | 147 | 6 | 60 | 369 | 32 | 366 | 3.15e-73 | 234 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364630 | AT5G01930.1 | 55.000 | 460 | 128 | 7 | 3 | 398 | 4 | 448 | 0.0 | 516 |
| Msa1364630 | AT5G66460.1 | 41.361 | 382 | 161 | 5 | 59 | 380 | 31 | 409 | 2.38e-97 | 297 |
| Msa1364630 | AT3G10890.1 | 39.305 | 374 | 165 | 7 | 59 | 371 | 31 | 403 | 8.86e-95 | 290 |
| Msa1364630 | AT3G10900.1 | 39.733 | 375 | 163 | 7 | 59 | 371 | 29 | 402 | 1.24e-89 | 276 |
| Msa1364630 | AT2G20680.1 | 37.666 | 377 | 174 | 4 | 54 | 369 | 37 | 413 | 5.24e-87 | 271 |
| Msa1364630 | AT4G28320.1 | 36.923 | 390 | 176 | 5 | 59 | 378 | 41 | 430 | 1.33e-86 | 270 |
| Msa1364630 | AT3G30540.1 | 44.295 | 298 | 141 | 6 | 59 | 332 | 29 | 325 | 9.50e-83 | 256 |
| Msa1364630 | AT1G02310.1 | 37.600 | 375 | 163 | 8 | 59 | 368 | 29 | 397 | 2.11e-82 | 258 |
| Msa1364630 | AT1G02310.2 | 37.600 | 375 | 163 | 8 | 59 | 368 | 49 | 417 | 3.18e-82 | 258 |
Find 114 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATATGTCCATGCTTTATT+AGG | 0.116387 | tig0018182:-2420 | None:intergenic |
| CATAAACCTATCACAAATTA+TGG | 0.137834 | tig0018182:+2574 | Msa1364630:CDS |
| ACCAATCTCAATGAAGAAAA+TGG | 0.189901 | tig0018182:+2453 | Msa1364630:exon |
| GGTCAGCCTTTCTATATAAA+TGG | 0.201660 | tig0018182:+3037 | Msa1364630:CDS |
| CTCCTTTCTTTGTGGAGTTT+AGG | 0.259533 | tig0018182:-4765 | None:intergenic |
| CTTCATTGAGATTGGTTACT+TGG | 0.269540 | tig0018182:-2446 | None:intergenic |
| CTGAGTTTGATCAATTTCTA+TGG | 0.277481 | tig0018182:+2359 | Msa1364630:five_prime_UTR |
| CCAATCTCCACTAGGTGTTT+TGG | 0.280198 | tig0018182:-3956 | None:intergenic |
| AAGTTGGAACTGACTTTATC+AGG | 0.305873 | tig0018182:+4047 | Msa1364630:CDS |
| ATCAGGAACCACCAAGTTCT+TGG | 0.307715 | tig0018182:+4064 | Msa1364630:CDS |
| GCTGACCATTCACCACAAAT+TGG | 0.318298 | tig0018182:-3021 | None:intergenic |
| TCCTGAAGGAACGGATAATA+TGG | 0.326511 | tig0018182:+4822 | Msa1364630:CDS |
| TCCCACAGGTGACAAGTTAC+AGG | 0.327129 | tig0018182:+3802 | Msa1364630:CDS |
| TTCCGACAATTATGCATAAC+TGG | 0.327327 | tig0018182:-5139 | None:intergenic |
| AATATGTCCATGCTTTATTA+GGG | 0.332873 | tig0018182:-2419 | None:intergenic |
| TCCACTCCCTCCTTTCTTTG+TGG | 0.336362 | tig0018182:-4773 | None:intergenic |
| ATTCACAAATATCACTTATA+AGG | 0.352293 | tig0018182:+3724 | Msa1364630:CDS |
| TCATACCCATAATTTGTGAT+AGG | 0.353905 | tig0018182:-2580 | None:intergenic |
| TCCATATTATCCGTTCCTTC+AGG | 0.368709 | tig0018182:-4823 | None:intergenic |
| ACTTGTTGAGCATATGCATT+TGG | 0.373847 | tig0018182:-4028 | None:intergenic |
| CTATGGAAAGATAACTTAAG+AGG | 0.396040 | tig0018182:+2376 | Msa1364630:five_prime_UTR |
| GGAAAGCACAATATGTGAAA+TGG | 0.397390 | tig0018182:+3491 | Msa1364630:CDS |
| TGGCAAATGGTGGGGAAGAA+AGG | 0.412227 | tig0018182:+2995 | Msa1364630:CDS |
| TAGGTTTATGTACATGATCT+TGG | 0.412451 | tig0018182:-2561 | None:intergenic |
| TTGAATCCATTTATATAGAA+AGG | 0.422648 | tig0018182:-3043 | None:intergenic |
| TGAAGTCTCTGAGGTGTTGA+AGG | 0.423185 | tig0018182:-3998 | None:intergenic |
| CTTACAACTCCAATTGCATC+TGG | 0.426201 | tig0018182:-4944 | None:intergenic |
| GAAAGCACAATATGTGAAAT+GGG | 0.430792 | tig0018182:+3492 | Msa1364630:CDS |
| AAGAAAGGAGGGAGTGGAGC+TGG | 0.438177 | tig0018182:+4778 | Msa1364630:CDS |
| CCAAAACACCTAGTGGAGAT+TGG | 0.439901 | tig0018182:+3956 | Msa1364630:CDS |
| GAGGATGCTGAAAAGTATCT+TGG | 0.444822 | tig0018182:+4643 | Msa1364630:CDS |
| TACCAGTTATGCATAATTGT+CGG | 0.445652 | tig0018182:+5137 | Msa1364630:three_prime_UTR |
| TAAATGGATTCAACACATAC+TGG | 0.447247 | tig0018182:+3053 | Msa1364630:CDS |
| AACATCACCTTTGTTTCCTA+AGG | 0.456186 | tig0018182:-2220 | None:intergenic |
| ATAGGATTGGATACAAGAAA+TGG | 0.465459 | tig0018182:+3910 | Msa1364630:intron |
| CTATATGTTGAGTTGTAGCC+AGG | 0.468183 | tig0018182:-4709 | None:intergenic |
| CCAATCTCAATGAAGAAAAT+GGG | 0.469143 | tig0018182:+2454 | Msa1364630:exon |
| ATCCTAAACTCCACAAAGAA+AGG | 0.469378 | tig0018182:+4763 | Msa1364630:CDS |
| ATATCTCATTTGTAAAATCA+TGG | 0.469699 | tig0018182:+4605 | Msa1364630:CDS |
| TGTGTTCTACCAGATGCAAT+TGG | 0.470041 | tig0018182:+4935 | Msa1364630:CDS |
| GGAAACCAATTTGTGGTGAA+TGG | 0.470394 | tig0018182:+3016 | Msa1364630:CDS |
| GAGGATGAATGGCAAATGGT+GGG | 0.474776 | tig0018182:+2986 | Msa1364630:CDS |
| CTAGTGGAGATTGGACTAGA+AGG | 0.477254 | tig0018182:+3965 | Msa1364630:CDS |
| CAGGAAATACCTGCCACAAA+AGG | 0.479541 | tig0018182:-4804 | None:intergenic |
| TCCTCTTCCATGTCCCACAT+TGG | 0.489039 | tig0018182:-2968 | None:intergenic |
| CAAAGTCTACACCAAGAACT+TGG | 0.492473 | tig0018182:-4075 | None:intergenic |
| AGAGGATGAATGGCAAATGG+TGG | 0.500090 | tig0018182:+2985 | Msa1364630:CDS |
| GTGGGATCTGAGTTGCATCT+AGG | 0.501166 | tig0018182:-3785 | None:intergenic |
| ATCCACCTTACTAAAAGCAT+TGG | 0.505976 | tig0018182:-2518 | None:intergenic |
| AACCCACTTTAAAGTGCCTT+AGG | 0.506233 | tig0018182:+2204 | Msa1364630:five_prime_UTR |
| ATAAACCTATCACAAATTAT+GGG | 0.507531 | tig0018182:+2575 | Msa1364630:CDS |
| GGTGGATGAAGAGGCACAAA+AGG | 0.509180 | tig0018182:+2534 | Msa1364630:CDS |
| TTTCCTAAGGCACTTTAAAG+TGG | 0.509582 | tig0018182:-2207 | None:intergenic |
| AAGGGTTACAATACTTGAAG+TGG | 0.512139 | tig0018182:-4881 | None:intergenic |
| GCCAACAATTGGGAGGCATA+TGG | 0.519304 | tig0018182:+3466 | Msa1364630:intron |
| TTCCTAAGGCACTTTAAAGT+GGG | 0.519895 | tig0018182:-2206 | None:intergenic |
| CTCATTTGTAAAATCATGGA+TGG | 0.524777 | tig0018182:+4609 | Msa1364630:CDS |
| ACCAATGTGGGACATGGAAG+AGG | 0.524800 | tig0018182:+2967 | Msa1364630:CDS |
| AAGCAAGCCTCGTGGATTGA+AGG | 0.524825 | tig0018182:-4900 | None:intergenic |
| AATGCATATGCTCAACAAGT+TGG | 0.524998 | tig0018182:+4031 | Msa1364630:CDS |
| GGTGTATCATCCAAGGATCC+TGG | 0.525677 | tig0018182:+4691 | Msa1364630:CDS |
| TGAGTTTGGTGTATCATCCA+AGG | 0.526819 | tig0018182:+4684 | Msa1364630:CDS |
| TGAGTTGTAGCCAGGATCCT+TGG | 0.527284 | tig0018182:-4701 | None:intergenic |
| GTGAAATGGGGCAAAGATGC+TGG | 0.528082 | tig0018182:+3505 | Msa1364630:CDS |
| AACATGCTTCTATCTTAAGA+TGG | 0.528997 | tig0018182:-5090 | None:intergenic |
| TTGTAAGAAGAAGAAAATGT+TGG | 0.531641 | tig0018182:+4960 | Msa1364630:CDS |
| GTCCATGCTTTATTAGGGCA+TGG | 0.537644 | tig0018182:-2414 | None:intergenic |
| TCCACAAAGAAAGGAGGGAG+TGG | 0.538406 | tig0018182:+4772 | Msa1364630:CDS |
| CATCATCAGAGGTCAAGTTA+AGG | 0.540046 | tig0018182:-3528 | None:intergenic |
| ATCAAACTCAGAAGATTAGC+GGG | 0.541385 | tig0018182:-2347 | None:intergenic |
| AACAATTGGGAGGCATATGG+TGG | 0.543604 | tig0018182:+3469 | Msa1364630:intron |
| GAAGAAAGGAAACCAATTTG+TGG | 0.551821 | tig0018182:+3009 | Msa1364630:CDS |
| GAGGGAACCAATGTGGGACA+TGG | 0.556077 | tig0018182:+2961 | Msa1364630:CDS |
| AATAAAGCATGGACATATTG+TGG | 0.557414 | tig0018182:+2423 | Msa1364630:five_prime_UTR |
| AGCAAGCCTCGTGGATTGAA+GGG | 0.560648 | tig0018182:-4899 | None:intergenic |
| TGGAACTTAGAATCAAAAGA+AGG | 0.561985 | tig0018182:-2498 | None:intergenic |
| AACCTGTAACTTGTCACCTG+TGG | 0.562152 | tig0018182:-3804 | None:intergenic |
| GCAATGGTTTATACAAGTGA+AGG | 0.562161 | tig0018182:-2257 | None:intergenic |
| CTACACAAATTCAACGTGCA+TGG | 0.563061 | tig0018182:-5054 | None:intergenic |
| CTTCTAGTCCAATCTCCACT+AGG | 0.564151 | tig0018182:-3964 | None:intergenic |
| TTGTGGCAGGTATTTCCTGA+AGG | 0.566518 | tig0018182:+4808 | Msa1364630:CDS |
| TACCATGCCCTAATAAAGCA+TGG | 0.567904 | tig0018182:+2412 | Msa1364630:five_prime_UTR |
| ACCTGTAACTTGTCACCTGT+GGG | 0.569730 | tig0018182:-3803 | None:intergenic |
| TTTAAGGAGGGAACCAATGT+GGG | 0.571417 | tig0018182:+2955 | Msa1364630:intron |
| TATGGCTATAGCTTTACAGT+GGG | 0.572477 | tig0018182:-5026 | None:intergenic |
| GAAGTCTCTGAGGTGTTGAA+GGG | 0.585049 | tig0018182:-3997 | None:intergenic |
| GGAAGAGGATGAATGGCAAA+TGG | 0.586451 | tig0018182:+2982 | Msa1364630:CDS |
| TTCAAACAAGCATCCTCACT+AGG | 0.590988 | tig0018182:+3127 | Msa1364630:CDS |
| CTAAACTCCACAAAGAAAGG+AGG | 0.591140 | tig0018182:+4766 | Msa1364630:CDS |
| TAAAGTGCCTTAGGAAACAA+AGG | 0.592010 | tig0018182:+2213 | Msa1364630:five_prime_UTR |
| ATGGATGGATGCACACATAG+AGG | 0.592357 | tig0018182:+4624 | Msa1364630:CDS |
| GGGACATGGAAGAGGATGAA+TGG | 0.597454 | tig0018182:+2975 | Msa1364630:CDS |
| GATGAAGAGGCACAAAAGGA+AGG | 0.602151 | tig0018182:+2538 | Msa1364630:CDS |
| GCAGGTATTTCCTGAAGGAA+CGG | 0.606073 | tig0018182:+4813 | Msa1364630:CDS |
| AATTGATCCAAAACACCTAG+TGG | 0.607164 | tig0018182:+3949 | Msa1364630:CDS |
| TAAACTCCACAAAGAAAGGA+GGG | 0.617337 | tig0018182:+4767 | Msa1364630:CDS |
| GTTACAATACTTGAAGTGGA+AGG | 0.619163 | tig0018182:-4877 | None:intergenic |
| GATCAAACTCAGAAGATTAG+CGG | 0.621759 | tig0018182:-2348 | None:intergenic |
| ACAAACTGTCATACCTAGTG+AGG | 0.622535 | tig0018182:-3140 | None:intergenic |
| GGAACGGATAATATGGATGA+CGG | 0.623585 | tig0018182:+4829 | Msa1364630:CDS |
| ATATGTGTATCTGCAATTTG+TGG | 0.623688 | tig0018182:-4586 | None:intergenic |
| ATTGCATCTGGTAGAACACA+AGG | 0.641862 | tig0018182:-4932 | None:intergenic |
| AGATGCAACTCAGATCCCAC+AGG | 0.642509 | tig0018182:+3788 | Msa1364630:CDS |
| ATATGGCTATAGCTTTACAG+TGG | 0.643440 | tig0018182:-5027 | None:intergenic |
| AGGATGAATGGCAAATGGTG+GGG | 0.647855 | tig0018182:+2987 | Msa1364630:CDS |
| TGAGTAGAAGTCATCATCAG+AGG | 0.649203 | tig0018182:-3539 | None:intergenic |
| ACAATTGGGAGGCATATGGT+GGG | 0.672246 | tig0018182:+3470 | Msa1364630:intron |
| AAAGCACAATATGTGAAATG+GGG | 0.673517 | tig0018182:+3493 | Msa1364630:CDS |
| GTTGAACAAAGCAAGCCTCG+TGG | 0.681133 | tig0018182:-4908 | None:intergenic |
| AGTCTACACCAAGAACTTGG+TGG | 0.681486 | tig0018182:-4072 | None:intergenic |
| GGATTGAACTGAAGTCTCTG+AGG | 0.686946 | tig0018182:-4007 | None:intergenic |
| GCTGCAGATAACTCCACCAG+AGG | 0.697287 | tig0018182:+3088 | Msa1364630:CDS |
| TTGTAACCCTTCAATCCACG+AGG | 0.744151 | tig0018182:+4893 | Msa1364630:CDS |
| CACCAGAGGAAAAGTCACTG+AGG | 0.767981 | tig0018182:+3102 | Msa1364630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATTATTTTTAAAC+TGG | + | tig0018182:2704-2723 | Msa1364630:intron | 10.0% |
| !!! | CTATTTATTTATTAACATTT+TGG | + | tig0018182:4171-4190 | Msa1364630:intron | 10.0% |
| !!! | AATATTTAATTCAGTTTTCA+TGG | - | tig0018182:2919-2938 | None:intergenic | 15.0% |
| !! | ATGAAAACTGAATTAAATAT+TGG | + | tig0018182:2918-2937 | Msa1364630:intron | 15.0% |
| !!! | TAAATATTGGTTTTTTGTAA+TGG | + | tig0018182:2931-2950 | Msa1364630:intron | 15.0% |
| !! | AAATTAAACTCATTAAGTTA+AGG | - | tig0018182:3249-3268 | None:intergenic | 15.0% |
| !! | ATAAACCTATCACAAATTAT+GGG | + | tig0018182:2575-2594 | Msa1364630:CDS | 20.0% |
| !! | TATAAAATATAACAGCTAGA+GGG | - | tig0018182:2613-2632 | None:intergenic | 20.0% |
| !! | ATATAAAATATAACAGCTAG+AGG | - | tig0018182:2614-2633 | None:intergenic | 20.0% |
| !!! | TTTTAAACAAAAGGTTTAGA+AGG | - | tig0018182:2832-2851 | None:intergenic | 20.0% |
| !! | TTGAATCCATTTATATAGAA+AGG | - | tig0018182:3046-3065 | None:intergenic | 20.0% |
| !! | ATTCACAAATATCACTTATA+AGG | + | tig0018182:3724-3743 | Msa1364630:CDS | 20.0% |
| !! | AGAAAATGTATGTATTACAA+GGG | - | tig0018182:4197-4216 | None:intergenic | 20.0% |
| !! | TAGAAAATGTATGTATTACA+AGG | - | tig0018182:4198-4217 | None:intergenic | 20.0% |
| !!! | AACAACATTTTCTATGTTTT+AGG | - | tig0018182:4255-4274 | None:intergenic | 20.0% |
| !!! | CTTGAAATATTTGTGTATTT+TGG | - | tig0018182:4347-4366 | None:intergenic | 20.0% |
| !! | CAAAATACACAAATATTTCA+AGG | + | tig0018182:4345-4364 | Msa1364630:intron | 20.0% |
| !! | AAGACTAAAACTTAAAAAAC+AGG | + | tig0018182:4414-4433 | Msa1364630:intron | 20.0% |
| !! | ATATCTCATTTGTAAAATCA+TGG | + | tig0018182:4605-4624 | Msa1364630:CDS | 20.0% |
| ! | TATAAACCATTGCTCAAAAA+TGG | + | tig0018182:2267-2286 | Msa1364630:five_prime_UTR | 25.0% |
| !! | AATATGTCCATGCTTTATTA+GGG | - | tig0018182:2422-2441 | None:intergenic | 25.0% |
| ! | CATAAACCTATCACAAATTA+TGG | + | tig0018182:2574-2593 | Msa1364630:CDS | 25.0% |
| ! | TGCTAAACTAAAATGATCAT+AGG | - | tig0018182:2762-2781 | None:intergenic | 25.0% |
| !!! | CTGAAAGAGTTTTAAACAAA+AGG | - | tig0018182:2841-2860 | None:intergenic | 25.0% |
| ! | TAAAAGAACAATCATTGCAT+TGG | - | tig0018182:2895-2914 | None:intergenic | 25.0% |
| !!! | GGTTTTTTGTAATGGTTTTA+AGG | + | tig0018182:2939-2958 | Msa1364630:intron | 25.0% |
| !!! | TTTTTGTAATGGTTTTAAGG+AGG | + | tig0018182:2942-2961 | Msa1364630:intron | 25.0% |
| !!! | TTTTGTAATGGTTTTAAGGA+GGG | + | tig0018182:2943-2962 | Msa1364630:intron | 25.0% |
| !!! | GTTTAATTTGTATACACCTT+CGG | + | tig0018182:3260-3279 | Msa1364630:intron | 25.0% |
| ! | AAGCAAAGAAATACAAAATC+AGG | + | tig0018182:3428-3447 | Msa1364630:intron | 25.0% |
| ! | AATCAGGCTAATATTATCAT+TGG | + | tig0018182:3444-3463 | Msa1364630:intron | 25.0% |
| !!! | AGCTTTAAATTAAGCAATGT+TGG | - | tig0018182:3636-3655 | None:intergenic | 25.0% |
| !! | TGCTTAATTTAAAGCTTGTT+TGG | + | tig0018182:3640-3659 | Msa1364630:intron | 25.0% |
| !!! | TTGGATCAATTTTTTTCACA+TGG | - | tig0018182:3940-3959 | None:intergenic | 25.0% |
| !! | TTTAGGACTAAAACCAAAAA+AGG | - | tig0018182:4238-4257 | None:intergenic | 25.0% |
| ! | AAGGAACTAAAACTAAAACA+AGG | + | tig0018182:4364-4383 | Msa1364630:intron | 25.0% |
| ! | ACTAAAACTTAAAAAACAGG+AGG | + | tig0018182:4417-4436 | Msa1364630:intron | 25.0% |
| ! | CTAAAACTTAAAAAACAGGA+GGG | + | tig0018182:4418-4437 | Msa1364630:intron | 25.0% |
| ! | ATTAAGTAGACAAATAGTGT+TGG | - | tig0018182:4473-4492 | None:intergenic | 25.0% |
| ! | TGTCTACTTAATAATGTGTT+TGG | + | tig0018182:4481-4500 | Msa1364630:intron | 25.0% |
| ! | TTGTAAGAAGAAGAAAATGT+TGG | + | tig0018182:4960-4979 | Msa1364630:CDS | 25.0% |
| !! | TATGTTCCATTTTTGAGCAA+TGG | - | tig0018182:2276-2295 | None:intergenic | 30.0% |
| CTGAGTTTGATCAATTTCTA+TGG | + | tig0018182:2359-2378 | Msa1364630:five_prime_UTR | 30.0% | |
| CTATGGAAAGATAACTTAAG+AGG | + | tig0018182:2376-2395 | Msa1364630:five_prime_UTR | 30.0% | |
| ! | CAATATGTCCATGCTTTATT+AGG | - | tig0018182:2423-2442 | None:intergenic | 30.0% |
| AATAAAGCATGGACATATTG+TGG | + | tig0018182:2423-2442 | Msa1364630:five_prime_UTR | 30.0% | |
| ACCAATCTCAATGAAGAAAA+TGG | + | tig0018182:2453-2472 | Msa1364630:exon | 30.0% | |
| CCAATCTCAATGAAGAAAAT+GGG | + | tig0018182:2454-2473 | Msa1364630:exon | 30.0% | |
| TGGAACTTAGAATCAAAAGA+AGG | - | tig0018182:2501-2520 | None:intergenic | 30.0% | |
| ! | AAGTTCCAATGCTTTTAGTA+AGG | + | tig0018182:2513-2532 | Msa1364630:CDS | 30.0% |
| TAGGTTTATGTACATGATCT+TGG | - | tig0018182:2564-2583 | None:intergenic | 30.0% | |
| ! | TCATACCCATAATTTGTGAT+AGG | - | tig0018182:2583-2602 | None:intergenic | 30.0% |
| ! | AAAAAAAAAGTTGGTCTGGT+TGG | - | tig0018182:2642-2661 | None:intergenic | 30.0% |
| ! | GTACAAAAAAAAAGTTGGTC+TGG | - | tig0018182:2646-2665 | None:intergenic | 30.0% |
| !!! | ACCAACTTTTTTTTTGTACG+AGG | + | tig0018182:2647-2666 | Msa1364630:intron | 30.0% |
| ACCTCGTACAAAAAAAAAGT+TGG | - | tig0018182:2651-2670 | None:intergenic | 30.0% | |
| ! | TAAATGGATTCAACACATAC+TGG | + | tig0018182:3053-3072 | Msa1364630:CDS | 30.0% |
| ! | AATGCAAAACTTTTTACCGA+AGG | - | tig0018182:3279-3298 | None:intergenic | 30.0% |
| TGATTGATTGTGATGTGATT+TGG | - | tig0018182:3306-3325 | None:intergenic | 30.0% | |
| CAAACGTTTGAATTATTCGA+CGG | + | tig0018182:3360-3379 | Msa1364630:intron | 30.0% | |
| TTTGAATTATTCGACGGTTA+TGG | + | tig0018182:3366-3385 | Msa1364630:intron | 30.0% | |
| TATTATCATTGGCCAACAAT+TGG | + | tig0018182:3455-3474 | Msa1364630:intron | 30.0% | |
| ATTATCATTGGCCAACAATT+GGG | + | tig0018182:3456-3475 | Msa1364630:intron | 30.0% | |
| ! | GAAAGCACAATATGTGAAAT+GGG | + | tig0018182:3492-3511 | Msa1364630:CDS | 30.0% |
| AAAGCACAATATGTGAAATG+GGG | + | tig0018182:3493-3512 | Msa1364630:CDS | 30.0% | |
| TGAGTTGTTGCATTTAACAA+AGG | - | tig0018182:3611-3630 | None:intergenic | 30.0% | |
| TATCCAGAAGAAGTTTACTA+GGG | - | tig0018182:3833-3852 | None:intergenic | 30.0% | |
| ATATCCAGAAGAAGTTTACT+AGG | - | tig0018182:3834-3853 | None:intergenic | 30.0% | |
| CACTTGTGAATGTACAATAT+AGG | + | tig0018182:3892-3911 | Msa1364630:intron | 30.0% | |
| GTGAATGTACAATATAGGAT+TGG | + | tig0018182:3897-3916 | Msa1364630:intron | 30.0% | |
| ATAGGATTGGATACAAGAAA+TGG | + | tig0018182:3910-3929 | Msa1364630:intron | 30.0% | |
| !! | ATTGGACTAGAAGGATTTTA+TGG | + | tig0018182:3974-3993 | Msa1364630:CDS | 30.0% |
| AACCAAAAAAGGAAGAATGA+GGG | - | tig0018182:4227-4246 | None:intergenic | 30.0% | |
| AAACCAAAAAAGGAAGAATG+AGG | - | tig0018182:4228-4247 | None:intergenic | 30.0% | |
| GTTGTACTATTCATGTCAAA+AGG | - | tig0018182:4526-4545 | None:intergenic | 30.0% | |
| ! | AAGTCAATGATCTTGTTTGA+AGG | + | tig0018182:4557-4576 | Msa1364630:intron | 30.0% |
| ! | AGTCAATGATCTTGTTTGAA+GGG | + | tig0018182:4558-4577 | Msa1364630:intron | 30.0% |
| ATATGTGTATCTGCAATTTG+TGG | - | tig0018182:4589-4608 | None:intergenic | 30.0% | |
| CTCATTTGTAAAATCATGGA+TGG | + | tig0018182:4609-4628 | Msa1364630:CDS | 30.0% | |
| AACATGCTTCTATCTTAAGA+TGG | - | tig0018182:5093-5112 | None:intergenic | 30.0% | |
| TACCAGTTATGCATAATTGT+CGG | + | tig0018182:5137-5156 | Msa1364630:three_prime_UTR | 30.0% | |
| !! | TTCCTAAGGCACTTTAAAGT+GGG | - | tig0018182:2209-2228 | None:intergenic | 35.0% |
| ! | TTTCCTAAGGCACTTTAAAG+TGG | - | tig0018182:2210-2229 | None:intergenic | 35.0% |
| ! | TAAAGTGCCTTAGGAAACAA+AGG | + | tig0018182:2213-2232 | Msa1364630:five_prime_UTR | 35.0% |
| ! | AACATCACCTTTGTTTCCTA+AGG | - | tig0018182:2223-2242 | None:intergenic | 35.0% |
| GCAATGGTTTATACAAGTGA+AGG | - | tig0018182:2260-2279 | None:intergenic | 35.0% | |
| ATCAAACTCAGAAGATTAGC+GGG | - | tig0018182:2350-2369 | None:intergenic | 35.0% | |
| GATCAAACTCAGAAGATTAG+CGG | - | tig0018182:2351-2370 | None:intergenic | 35.0% | |
| ! | CTTCATTGAGATTGGTTACT+TGG | - | tig0018182:2449-2468 | None:intergenic | 35.0% |
| ! | CCCATTTTCTTCATTGAGAT+TGG | - | tig0018182:2457-2476 | None:intergenic | 35.0% |
| ! | TTCCAATGCTTTTAGTAAGG+TGG | + | tig0018182:2516-2535 | Msa1364630:CDS | 35.0% |
| ! | ATCCACCTTACTAAAAGCAT+TGG | - | tig0018182:2521-2540 | None:intergenic | 35.0% |
| ! | TTTTAGTAAGGTGGATGAAG+AGG | + | tig0018182:2525-2544 | Msa1364630:CDS | 35.0% |
| GAAGAAAGGAAACCAATTTG+TGG | + | tig0018182:3009-3028 | Msa1364630:CDS | 35.0% | |
| GGTCAGCCTTTCTATATAAA+TGG | + | tig0018182:3037-3056 | Msa1364630:CDS | 35.0% | |
| TATGACAGTTTGTCGAACTT+GGG | + | tig0018182:3150-3169 | Msa1364630:intron | 35.0% | |
| TTATGACGAAGAAGTCTTCA+AGG | + | tig0018182:3219-3238 | Msa1364630:intron | 35.0% | |
| TATGGTTATGATTGATCTGC+AGG | + | tig0018182:3384-3403 | Msa1364630:intron | 35.0% | |
| ! | GGAAAGCACAATATGTGAAA+TGG | + | tig0018182:3491-3510 | Msa1364630:CDS | 35.0% |
| AAAGGAACTTGCCTTAACAT+GGG | - | tig0018182:3593-3612 | None:intergenic | 35.0% | |
| !! | AAGATCCTACCATTTTTGCT+TGG | + | tig0018182:3747-3766 | Msa1364630:CDS | 35.0% |
| !! | AGATCCTACCATTTTTGCTT+GGG | + | tig0018182:3748-3767 | Msa1364630:CDS | 35.0% |
| ATCCAGAAGAAGTTTACTAG+GGG | - | tig0018182:3832-3851 | None:intergenic | 35.0% | |
| AATTGATCCAAAACACCTAG+TGG | + | tig0018182:3949-3968 | Msa1364630:CDS | 35.0% | |
| ! | ACTTGTTGAGCATATGCATT+TGG | - | tig0018182:4031-4050 | None:intergenic | 35.0% |
| AATGCATATGCTCAACAAGT+TGG | + | tig0018182:4031-4050 | Msa1364630:CDS | 35.0% | |
| ! | AAGTTGGAACTGACTTTATC+AGG | + | tig0018182:4047-4066 | Msa1364630:CDS | 35.0% |
| ACCAAAAAAGGAAGAATGAG+GGG | - | tig0018182:4226-4245 | None:intergenic | 35.0% | |
| GAATCAGTTGCTGTAATATG+TGG | - | tig0018182:4325-4344 | None:intergenic | 35.0% | |
| CCAAACTCAGAAAAAACAAC+TGG | - | tig0018182:4673-4692 | None:intergenic | 35.0% | |
| !!! | CCAGTTGTTTTTTCTGAGTT+TGG | + | tig0018182:4670-4689 | Msa1364630:CDS | 35.0% |
| ATCCTAAACTCCACAAAGAA+AGG | + | tig0018182:4763-4782 | Msa1364630:CDS | 35.0% | |
| TAAACTCCACAAAGAAAGGA+GGG | + | tig0018182:4767-4786 | Msa1364630:CDS | 35.0% | |
| GTTACAATACTTGAAGTGGA+AGG | - | tig0018182:4880-4899 | None:intergenic | 35.0% | |
| AAGGGTTACAATACTTGAAG+TGG | - | tig0018182:4884-4903 | None:intergenic | 35.0% | |
| ! | TATGGCTATAGCTTTACAGT+GGG | - | tig0018182:5029-5048 | None:intergenic | 35.0% |
| ! | ATATGGCTATAGCTTTACAG+TGG | - | tig0018182:5030-5049 | None:intergenic | 35.0% |
| !!! | TCAACGTGCATGGTTTTATA+TGG | - | tig0018182:5047-5066 | None:intergenic | 35.0% |
| TTCCGACAATTATGCATAAC+TGG | - | tig0018182:5142-5161 | None:intergenic | 35.0% | |
| !! | AACCCACTTTAAAGTGCCTT+AGG | + | tig0018182:2204-2223 | Msa1364630:five_prime_UTR | 40.0% |
| TACCATGCCCTAATAAAGCA+TGG | + | tig0018182:2412-2431 | Msa1364630:five_prime_UTR | 40.0% | |
| TCTTTCAGCATCGCTTAGTT+CGG | + | tig0018182:2853-2872 | Msa1364630:intron | 40.0% | |
| ! | AACAATCATTGCATTGGCCA+TGG | - | tig0018182:2889-2908 | None:intergenic | 40.0% |
| !! | TTTTAAGGAGGGAACCAATG+TGG | + | tig0018182:2954-2973 | Msa1364630:intron | 40.0% |
| TTTAAGGAGGGAACCAATGT+GGG | + | tig0018182:2955-2974 | Msa1364630:intron | 40.0% | |
| GGAAACCAATTTGTGGTGAA+TGG | + | tig0018182:3016-3035 | Msa1364630:CDS | 40.0% | |
| TTCAAACAAGCATCCTCACT+AGG | + | tig0018182:3127-3146 | Msa1364630:CDS | 40.0% | |
| ACAAACTGTCATACCTAGTG+AGG | - | tig0018182:3143-3162 | None:intergenic | 40.0% | |
| GTATGACAGTTTGTCGAACT+TGG | + | tig0018182:3149-3168 | Msa1364630:intron | 40.0% | |
| TTCTTCGTCATAAACCGAAG+GGG | - | tig0018182:3212-3231 | None:intergenic | 40.0% | |
| CTTCTTCGTCATAAACCGAA+GGG | - | tig0018182:3213-3232 | None:intergenic | 40.0% | |
| ACTTCTTCGTCATAAACCGA+AGG | - | tig0018182:3214-3233 | None:intergenic | 40.0% | |
| TTCACTTACCACAAAGTCCA+AGG | - | tig0018182:3410-3429 | None:intergenic | 40.0% | |
| CATCATCAGAGGTCAAGTTA+AGG | - | tig0018182:3531-3550 | None:intergenic | 40.0% | |
| TGAGTAGAAGTCATCATCAG+AGG | - | tig0018182:3542-3561 | None:intergenic | 40.0% | |
| CTACTACAAGTCCCATGTTA+AGG | + | tig0018182:3579-3598 | Msa1364630:intron | 40.0% | |
| CAAAGGAACTTGCCTTAACA+TGG | - | tig0018182:3594-3613 | None:intergenic | 40.0% | |
| AGTTCCCAAGCAAAAATGGT+AGG | - | tig0018182:3755-3774 | None:intergenic | 40.0% | |
| CATCAGTTCCCAAGCAAAAA+TGG | - | tig0018182:3759-3778 | None:intergenic | 40.0% | |
| CAAAGTCTACACCAAGAACT+TGG | - | tig0018182:4078-4097 | None:intergenic | 40.0% | |
| !! | TTCACATGTATGCTGACTCT+TGG | + | tig0018182:4104-4123 | Msa1364630:intron | 40.0% |
| !! | GAGGATGCTGAAAAGTATCT+TGG | + | tig0018182:4643-4662 | Msa1364630:CDS | 40.0% |
| !! | TGAGTTTGGTGTATCATCCA+AGG | + | tig0018182:4684-4703 | Msa1364630:CDS | 40.0% |
| ! | CTATATGTTGAGTTGTAGCC+AGG | - | tig0018182:4712-4731 | None:intergenic | 40.0% |
| CTCCTTTCTTTGTGGAGTTT+AGG | - | tig0018182:4768-4787 | None:intergenic | 40.0% | |
| CTAAACTCCACAAAGAAAGG+AGG | + | tig0018182:4766-4785 | Msa1364630:CDS | 40.0% | |
| TCCTGAAGGAACGGATAATA+TGG | + | tig0018182:4822-4841 | Msa1364630:CDS | 40.0% | |
| TCCATATTATCCGTTCCTTC+AGG | - | tig0018182:4826-4845 | None:intergenic | 40.0% | |
| GGAACGGATAATATGGATGA+CGG | + | tig0018182:4829-4848 | Msa1364630:CDS | 40.0% | |
| ATTGCATCTGGTAGAACACA+AGG | - | tig0018182:4935-4954 | None:intergenic | 40.0% | |
| TGTGTTCTACCAGATGCAAT+TGG | + | tig0018182:4935-4954 | Msa1364630:CDS | 40.0% | |
| CTTACAACTCCAATTGCATC+TGG | - | tig0018182:4947-4966 | None:intergenic | 40.0% | |
| CTACACAAATTCAACGTGCA+TGG | - | tig0018182:5057-5076 | None:intergenic | 40.0% | |
| ! | GTCCATGCTTTATTAGGGCA+TGG | - | tig0018182:2417-2436 | None:intergenic | 45.0% |
| ! | GATGAAGAGGCACAAAAGGA+AGG | + | tig0018182:2538-2557 | Msa1364630:CDS | 45.0% |
| GCATCGCTTAGTTCGGTATT+CGG | + | tig0018182:2860-2879 | Msa1364630:intron | 45.0% | |
| AGTTCGGTATTCGGTAACCA+TGG | + | tig0018182:2869-2888 | Msa1364630:intron | 45.0% | |
| GGAAGAGGATGAATGGCAAA+TGG | + | tig0018182:2982-3001 | Msa1364630:CDS | 45.0% | |
| AGAGGATGAATGGCAAATGG+TGG | + | tig0018182:2985-3004 | Msa1364630:CDS | 45.0% | |
| GAGGATGAATGGCAAATGGT+GGG | + | tig0018182:2986-3005 | Msa1364630:CDS | 45.0% | |
| AGGATGAATGGCAAATGGTG+GGG | + | tig0018182:2987-3006 | Msa1364630:CDS | 45.0% | |
| GCTGACCATTCACCACAAAT+TGG | - | tig0018182:3024-3043 | None:intergenic | 45.0% | |
| ! | AACCTCAGTGACTTTTCCTC+TGG | - | tig0018182:3107-3126 | None:intergenic | 45.0% |
| CGAACTTGGGCTTTCAATGA+TGG | + | tig0018182:3163-3182 | Msa1364630:intron | 45.0% | |
| AACCGAAGGGGATTTCTGTA+GGG | - | tig0018182:3200-3219 | None:intergenic | 45.0% | |
| AAACCGAAGGGGATTTCTGT+AGG | - | tig0018182:3201-3220 | None:intergenic | 45.0% | |
| TATGATTGATCTGCAGGCCT+TGG | + | tig0018182:3390-3409 | Msa1364630:intron | 45.0% | |
| ATCATTGGCCAACAATTGGG+AGG | + | tig0018182:3459-3478 | Msa1364630:intron | 45.0% | |
| ACCATATGCCTCCCAATTGT+TGG | - | tig0018182:3470-3489 | None:intergenic | 45.0% | |
| ! | AACAATTGGGAGGCATATGG+TGG | + | tig0018182:3469-3488 | Msa1364630:intron | 45.0% |
| ! | ACAATTGGGAGGCATATGGT+GGG | + | tig0018182:3470-3489 | Msa1364630:intron | 45.0% |
| ! | ACCTGTAACTTGTCACCTGT+GGG | - | tig0018182:3806-3825 | None:intergenic | 45.0% |
| ! | AACCTGTAACTTGTCACCTG+TGG | - | tig0018182:3807-3826 | None:intergenic | 45.0% |
| TGCCCCTAGTAAACTTCTTC+TGG | + | tig0018182:3827-3846 | Msa1364630:intron | 45.0% | |
| ! | CCAATCTCCACTAGGTGTTT+TGG | - | tig0018182:3959-3978 | None:intergenic | 45.0% |
| CCAAAACACCTAGTGGAGAT+TGG | + | tig0018182:3956-3975 | Msa1364630:CDS | 45.0% | |
| CTTCTAGTCCAATCTCCACT+AGG | - | tig0018182:3967-3986 | None:intergenic | 45.0% | |
| ! | CTAGTGGAGATTGGACTAGA+AGG | + | tig0018182:3965-3984 | Msa1364630:CDS | 45.0% |
| !! | GAAGTCTCTGAGGTGTTGAA+GGG | - | tig0018182:4000-4019 | None:intergenic | 45.0% |
| !! | TGAAGTCTCTGAGGTGTTGA+AGG | - | tig0018182:4001-4020 | None:intergenic | 45.0% |
| GGATTGAACTGAAGTCTCTG+AGG | - | tig0018182:4010-4029 | None:intergenic | 45.0% | |
| ATCAGGAACCACCAAGTTCT+TGG | + | tig0018182:4064-4083 | Msa1364630:CDS | 45.0% | |
| AGTCTACACCAAGAACTTGG+TGG | - | tig0018182:4075-4094 | None:intergenic | 45.0% | |
| !!! | GCCCCTCATTCTTCCTTTTT+TGG | + | tig0018182:4222-4241 | Msa1364630:intron | 45.0% |
| ATGGATGGATGCACACATAG+AGG | + | tig0018182:4624-4643 | Msa1364630:CDS | 45.0% | |
| CAGGAAATACCTGCCACAAA+AGG | - | tig0018182:4807-4826 | None:intergenic | 45.0% | |
| TTGTGGCAGGTATTTCCTGA+AGG | + | tig0018182:4808-4827 | Msa1364630:CDS | 45.0% | |
| GCAGGTATTTCCTGAAGGAA+CGG | + | tig0018182:4813-4832 | Msa1364630:CDS | 45.0% | |
| TTGTAACCCTTCAATCCACG+AGG | + | tig0018182:4893-4912 | Msa1364630:CDS | 45.0% | |
| ! | GGTGGATGAAGAGGCACAAA+AGG | + | tig0018182:2534-2553 | Msa1364630:CDS | 50.0% |
| ACCAATGTGGGACATGGAAG+AGG | + | tig0018182:2967-2986 | Msa1364630:CDS | 50.0% | |
| TCCTCTTCCATGTCCCACAT+TGG | - | tig0018182:2971-2990 | None:intergenic | 50.0% | |
| GGGACATGGAAGAGGATGAA+TGG | + | tig0018182:2975-2994 | Msa1364630:CDS | 50.0% | |
| ! | TGGCAAATGGTGGGGAAGAA+AGG | + | tig0018182:2995-3014 | Msa1364630:CDS | 50.0% |
| ! | CTCAGTGACTTTTCCTCTGG+TGG | - | tig0018182:3104-3123 | None:intergenic | 50.0% |
| CACCAGAGGAAAAGTCACTG+AGG | + | tig0018182:3102-3121 | Msa1364630:CDS | 50.0% | |
| TGGGCTTTCAATGATGGCCA+AGG | + | tig0018182:3169-3188 | Msa1364630:intron | 50.0% | |
| GGGCTTTCAATGATGGCCAA+GGG | + | tig0018182:3170-3189 | Msa1364630:intron | 50.0% | |
| CTTTCAATGATGGCCAAGGG+CGG | + | tig0018182:3173-3192 | Msa1364630:intron | 50.0% | |
| TTTCAATGATGGCCAAGGGC+GGG | + | tig0018182:3174-3193 | Msa1364630:intron | 50.0% | |
| ! | GCCAACAATTGGGAGGCATA+TGG | + | tig0018182:3466-3485 | Msa1364630:intron | 50.0% |
| GTGAAATGGGGCAAAGATGC+TGG | + | tig0018182:3505-3524 | Msa1364630:CDS | 50.0% | |
| GTGGGATCTGAGTTGCATCT+AGG | - | tig0018182:3788-3807 | None:intergenic | 50.0% | |
| AGATGCAACTCAGATCCCAC+AGG | + | tig0018182:3788-3807 | Msa1364630:CDS | 50.0% | |
| TCCCACAGGTGACAAGTTAC+AGG | + | tig0018182:3802-3821 | Msa1364630:CDS | 50.0% | |
| GGTGTATCATCCAAGGATCC+TGG | + | tig0018182:4691-4710 | Msa1364630:CDS | 50.0% | |
| TGAGTTGTAGCCAGGATCCT+TGG | - | tig0018182:4704-4723 | None:intergenic | 50.0% | |
| TCCACAAAGAAAGGAGGGAG+TGG | + | tig0018182:4772-4791 | Msa1364630:CDS | 50.0% | |
| TCCACTCCCTCCTTTCTTTG+TGG | - | tig0018182:4776-4795 | None:intergenic | 50.0% | |
| ! | AGCAAGCCTCGTGGATTGAA+GGG | - | tig0018182:4902-4921 | None:intergenic | 50.0% |
| ! | AAGCAAGCCTCGTGGATTGA+AGG | - | tig0018182:4903-4922 | None:intergenic | 50.0% |
| GTTGAACAAAGCAAGCCTCG+TGG | - | tig0018182:4911-4930 | None:intergenic | 50.0% | |
| GAGGGAACCAATGTGGGACA+TGG | + | tig0018182:2961-2980 | Msa1364630:CDS | 55.0% | |
| GCTGCAGATAACTCCACCAG+AGG | + | tig0018182:3088-3107 | Msa1364630:CDS | 55.0% | |
| GGCCCTACAGAAATCCCCTT+CGG | + | tig0018182:3195-3214 | Msa1364630:intron | 55.0% | |
| TCTGCAGGCCTTGGACTTTG+TGG | + | tig0018182:3399-3418 | Msa1364630:intron | 55.0% | |
| AAGAAAGGAGGGAGTGGAGC+TGG | + | tig0018182:4778-4797 | Msa1364630:CDS | 55.0% | |
| ! | GTGGAGCTGGAAGCCTTTTG+TGG | + | tig0018182:4791-4810 | Msa1364630:CDS | 55.0% |
| ! | AGCTGGAAGCCTTTTGTGGC+AGG | + | tig0018182:4795-4814 | Msa1364630:CDS | 55.0% |
| ATTTCTGTAGGGCCCGCCCT+TGG | - | tig0018182:3189-3208 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018182 | gene | 2199 | 5214 | 2199 | ID=Msa1364630;Name=Msa1364630 |
| tig0018182 | mRNA | 2199 | 5214 | 2199 | ID=Msa1364630-mRNA-1;Parent=Msa1364630;Name=Msa1364630-mRNA-1;_AED=0.14;_eAED=0.14;_QI=264|0.4|0.5|1|0.4|0.5|6|203|398 |
| tig0018182 | exon | 2199 | 2596 | 2199 | ID=Msa1364630-mRNA-1:exon:14094;Parent=Msa1364630-mRNA-1 |
| tig0018182 | exon | 2961 | 3156 | 2961 | ID=Msa1364630-mRNA-1:exon:14095;Parent=Msa1364630-mRNA-1 |
| tig0018182 | exon | 3481 | 3594 | 3481 | ID=Msa1364630-mRNA-1:exon:14096;Parent=Msa1364630-mRNA-1 |
| tig0018182 | exon | 3701 | 3823 | 3701 | ID=Msa1364630-mRNA-1:exon:14097;Parent=Msa1364630-mRNA-1 |
| tig0018182 | exon | 3914 | 4110 | 3914 | ID=Msa1364630-mRNA-1:exon:14098;Parent=Msa1364630-mRNA-1 |
| tig0018182 | exon | 4579 | 5214 | 4579 | ID=Msa1364630-mRNA-1:exon:14099;Parent=Msa1364630-mRNA-1 |
| tig0018182 | five_prime_UTR | 2199 | 2462 | 2199 | ID=Msa1364630-mRNA-1:five_prime_utr;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 2463 | 2596 | 2463 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 2961 | 3156 | 2961 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 3481 | 3594 | 3481 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 3701 | 3823 | 3701 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 3914 | 4110 | 3914 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | CDS | 4579 | 5011 | 4579 | ID=Msa1364630-mRNA-1:cds;Parent=Msa1364630-mRNA-1 |
| tig0018182 | three_prime_UTR | 5012 | 5214 | 5012 | ID=Msa1364630-mRNA-1:three_prime_utr;Parent=Msa1364630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
