Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366360 | KEH39156.1 | 73.913 | 138 | 27 | 1 | 4 | 132 | 42 | 179 | 1.51e-57 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366360 | A0A072VC21 | 73.913 | 138 | 27 | 1 | 4 | 132 | 42 | 179 | 7.19e-58 | 190 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1359930 | Msa1366360 | 0.812229 | 4.708747e-51 | -8.615850e-47 |
| Msa0862410 | Msa1366360 | 0.847847 | 8.926242e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366360 | MtrunA17_Chr2g0324581 | 83.051 | 118 | 11 | 1 | 4 | 112 | 185 | 302 | 4.95e-60 | 190 |
| Msa1366360 | MtrunA17_Chr2g0324591 | 65.254 | 118 | 32 | 1 | 4 | 112 | 203 | 320 | 3.44e-41 | 142 |
| Msa1366360 | MtrunA17_Chr2g0324661 | 52.101 | 119 | 32 | 5 | 4 | 111 | 169 | 273 | 3.18e-21 | 88.2 |
| Msa1366360 | MtrunA17_Chr2g0305081 | 95.122 | 41 | 2 | 0 | 113 | 153 | 14 | 54 | 2.92e-19 | 78.2 |
| Msa1366360 | MtrunA17_Chr3g0115191 | 90.244 | 41 | 4 | 0 | 112 | 152 | 281 | 321 | 2.12e-17 | 78.2 |
| Msa1366360 | MtrunA17_Chr5g0424661 | 86.047 | 43 | 6 | 0 | 112 | 154 | 280 | 322 | 5.98e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366360 | AT1G36990.1 | 69.767 | 43 | 13 | 0 | 112 | 154 | 276 | 318 | 3.22e-12 | 63.5 |
Find 73 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAGTTCTGTTATGGTAAA+TGG | 0.188397 | tig0018449:-206 | Msa1366360:three_prime_UTR |
| ACAATTTCAAATTCAATATA+TGG | 0.204005 | tig0018449:-2933 | Msa1366360:CDS |
| GACAGAGAATCATAAGAAAA+AGG | 0.233023 | tig0018449:-2638 | Msa1366360:CDS |
| AGAAAGCTTAATTGAAAGTA+TGG | 0.246651 | tig0018449:-4432 | Msa1366360:five_prime_UTR |
| ATTAGAAGCAAAGGAAATTA+AGG | 0.271373 | tig0018449:-4578 | Msa1366360:intron |
| TAGCAAGTTCTTCAAGCCTT+TGG | 0.295788 | tig0018449:+973 | None:intergenic |
| ATCTATAACTAACCTTGATT+TGG | 0.296096 | tig0018449:+2837 | None:intergenic |
| ACATTCAATCCAAAGAATTA+TGG | 0.303975 | tig0018449:+4016 | None:intergenic |
| GGTTTGGTTCCATAATTCTT+TGG | 0.308785 | tig0018449:-4025 | Msa1366360:five_prime_UTR |
| TTCTTTGGATTGAATGTTAG+AGG | 0.319498 | tig0018449:-4010 | Msa1366360:intron |
| GAGGAAGAAACAAGAAGAAT+TGG | 0.332205 | tig0018449:-4391 | Msa1366360:five_prime_UTR |
| TTGTTGTTCTTAGAATAAAA+AGG | 0.336964 | tig0018449:-4226 | Msa1366360:intron |
| GAAAACTTGGAACAGATTAG+AGG | 0.342745 | tig0018449:-3001 | Msa1366360:intron |
| CAATATATGGAAAGAGCTTC+TGG | 0.347044 | tig0018449:-2920 | Msa1366360:CDS |
| AAAGAACTAGAAGACATAAA+TGG | 0.349189 | tig0018449:-2688 | Msa1366360:CDS |
| AGCAAGTTCTTCAAGCCTTT+GGG | 0.357377 | tig0018449:+974 | None:intergenic |
| GAGAGCGAGGGTCGCGGGAG+AGG | 0.374576 | tig0018449:-4674 | Msa1366360:five_prime_UTR |
| TGACATAATTATAGCAGAAA+TGG | 0.387629 | tig0018449:+169 | None:intergenic |
| CACACCATGTCTTACTTTGG+TGG | 0.393906 | tig0018449:+2711 | None:intergenic |
| GCGGGAGAGGAGAGGGTCGC+CGG | 0.399149 | tig0018449:-4661 | Msa1366360:five_prime_UTR |
| AGAGGGTCGCCGGGAGAGAA+AGG | 0.399773 | tig0018449:-4651 | Msa1366360:five_prime_UTR |
| TTTCTTCAAGGATTCATAGT+TGG | 0.401438 | tig0018449:+2871 | None:intergenic |
| ATTAGTCCCCAACGACACTA+TGG | 0.406506 | tig0018449:-248 | Msa1366360:exon |
| TGTTGCAGGAAACATTGGTT+TGG | 0.423084 | tig0018449:-4041 | Msa1366360:intron |
| TGAAAGAGAGCGAGGGTCGC+GGG | 0.428328 | tig0018449:-4679 | Msa1366360:five_prime_UTR |
| CAACCCGCCATAGTGTCGTT+GGG | 0.431927 | tig0018449:+241 | None:intergenic |
| TTTCACACCATGTCTTACTT+TGG | 0.439427 | tig0018449:+2708 | None:intergenic |
| ACCGTCAATACCTAAGGCTT+TGG | 0.443243 | tig0018449:-919 | Msa1366360:intron |
| TTAGGTATTGACGGTGTCAC+TGG | 0.459042 | tig0018449:+927 | None:intergenic |
| AGTTTACTCACCAAAGCCTT+AGG | 0.461179 | tig0018449:+909 | None:intergenic |
| CCTTTGCTTCTAATGCAAAT+CGG | 0.462785 | tig0018449:+4587 | None:intergenic |
| CTGAAAGAGAGCGAGGGTCG+CGG | 0.465719 | tig0018449:-4680 | Msa1366360:five_prime_UTR |
| CGGGAGAGGAGAGGGTCGCC+GGG | 0.471331 | tig0018449:-4660 | Msa1366360:five_prime_UTR |
| GAAAGCTTAATTGAAAGTAT+GGG | 0.474338 | tig0018449:-4431 | Msa1366360:five_prime_UTR |
| GGAGATTTAAGAAGATATGA+AGG | 0.474849 | tig0018449:-4205 | Msa1366360:intron |
| GAGGGTCGCCGGGAGAGAAA+GGG | 0.483705 | tig0018449:-4650 | Msa1366360:five_prime_UTR |
| GAAGAAACAAGAAGAATTGG+AGG | 0.484939 | tig0018449:-4388 | Msa1366360:intron |
| AACGACACTATGGCGGGTTG+TGG | 0.491948 | tig0018449:-238 | Msa1366360:three_prime_UTR |
| GAGGGTCGCGGGAGAGGAGA+GGG | 0.494044 | tig0018449:-4668 | Msa1366360:five_prime_UTR |
| GGGGCTGGGTTTGCAATTGG+AGG | 0.496777 | tig0018449:-4410 | Msa1366360:five_prime_UTR |
| ATCGGTGCAGATCGGAGTGT+TGG | 0.515737 | tig0018449:+4605 | None:intergenic |
| ACTTCTGTTGCAGGAAACAT+TGG | 0.523691 | tig0018449:-4046 | Msa1366360:intron |
| TCGATCTCAGTCAATTCCTC+AGG | 0.527039 | tig0018449:-1109 | Msa1366360:intron |
| ACCAAAGCCTTAGGTATTGA+CGG | 0.527928 | tig0018449:+918 | None:intergenic |
| TGAAAAGAGAAGAGAATGGA+TGG | 0.533021 | tig0018449:-2740 | Msa1366360:intron |
| GGCGGCGACCCTTTCTCTCC+CGG | 0.533339 | tig0018449:+4642 | None:intergenic |
| CGAGGGTCGCGGGAGAGGAG+AGG | 0.537411 | tig0018449:-4669 | Msa1366360:five_prime_UTR |
| ACAACCCGCCATAGTGTCGT+TGG | 0.539304 | tig0018449:+240 | None:intergenic |
| GTGTTGGACGGCGAGGTCGA+CGG | 0.546335 | tig0018449:+4621 | None:intergenic |
| GACACTATGGCGGGTTGTGG+TGG | 0.546422 | tig0018449:-235 | Msa1366360:three_prime_UTR |
| CCGATTTGCATTAGAAGCAA+AGG | 0.550622 | tig0018449:-4587 | Msa1366360:five_prime_UTR |
| AAAGCTTAATTGAAAGTATG+GGG | 0.553492 | tig0018449:-4430 | Msa1366360:five_prime_UTR |
| AATTATAAATGACCAAATCA+AGG | 0.553980 | tig0018449:-2849 | Msa1366360:intron |
| TGTAATTGCGTCATATAATG+AGG | 0.564697 | tig0018449:-138 | Msa1366360:three_prime_UTR |
| GTCCCCAACGACACTATGGC+GGG | 0.588283 | tig0018449:-244 | Msa1366360:three_prime_UTR |
| AGAAGAGCTGAAAGAGAGCG+AGG | 0.590531 | tig0018449:-4687 | Msa1366360:five_prime_UTR |
| AGTGACACCGTCAATACCTA+AGG | 0.590553 | tig0018449:-925 | Msa1366360:CDS |
| ATAATTATAGCAGAAATGGC+AGG | 0.601487 | tig0018449:+173 | None:intergenic |
| AAAACTTGGAACAGATTAGA+GGG | 0.602556 | tig0018449:-3000 | Msa1366360:intron |
| CTATTAAGCAGTCAAGACAA+TGG | 0.604644 | tig0018449:-953 | Msa1366360:CDS |
| AAAAGGGTGAAGCATATCAA+AGG | 0.605182 | tig0018449:-2621 | Msa1366360:CDS |
| GGAATTGACTGAGATCGAGA+TGG | 0.610281 | tig0018449:+1114 | None:intergenic |
| TAATGCAAATCGGTGCAGAT+CGG | 0.610433 | tig0018449:+4597 | None:intergenic |
| AGTTCTGTTATGGTAAATGG+CGG | 0.611189 | tig0018449:-203 | Msa1366360:three_prime_UTR |
| GATCGGAGTGTTGGACGGCG+AGG | 0.614383 | tig0018449:+4614 | None:intergenic |
| AGGTTTCGGTCAAAACCCAA+AGG | 0.617561 | tig0018449:-989 | Msa1366360:CDS |
| GAAGAGCTGAAAGAGAGCGA+GGG | 0.619135 | tig0018449:-4686 | Msa1366360:five_prime_UTR |
| GTGCAGATCGGAGTGTTGGA+CGG | 0.620791 | tig0018449:+4609 | None:intergenic |
| AACCCGCCATAGTGTCGTTG+GGG | 0.631984 | tig0018449:+242 | None:intergenic |
| AGTCCCCAACGACACTATGG+CGG | 0.655248 | tig0018449:-245 | Msa1366360:three_prime_UTR |
| TTGGACGGCGAGGTCGACGG+CGG | 0.673722 | tig0018449:+4624 | None:intergenic |
| AAGCTTAATTGAAAGTATGG+GGG | 0.683305 | tig0018449:-4429 | Msa1366360:five_prime_UTR |
| TGTGCCACCAAAGTAAGACA+TGG | 0.701959 | tig0018449:-2715 | Msa1366360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATTATGATCATTT+TGG | - | tig0018449:1226-1245 | Msa1366360:intron | 10.0% |
| !!! | TTTGATTATTGATTTTTTAT+CGG | - | tig0018449:2521-2540 | Msa1366360:intron | 10.0% |
| !!! | TTGAATTTTTTTTTTTTGAA+TGG | - | tig0018449:2619-2638 | Msa1366360:CDS | 10.0% |
| !!! | TGAAGATAATTTTTTTTTTT+TGG | - | tig0018449:2791-2810 | Msa1366360:intron | 10.0% |
| !!! | TACATTTAATTTTATTCTTT+AGG | - | tig0018449:3434-3453 | Msa1366360:intron | 10.0% |
| !!! | TATCATTCTTTTAAATATAA+TGG | - | tig0018449:3731-3750 | Msa1366360:intron | 10.0% |
| !! | TTCATTAAGAAATTGAAATT+GGG | + | tig0018449:297-316 | None:intergenic | 15.0% |
| !! | AATTTCAATTTCTTAATGAA+GGG | - | tig0018449:297-316 | Msa1366360:intron | 15.0% |
| !!! | AATTTAATGTTGATGATAAT+TGG | - | tig0018449:626-645 | Msa1366360:intron | 15.0% |
| !!! | TTAAATGAGGTTTTATTATT+TGG | - | tig0018449:1457-1476 | Msa1366360:intron | 15.0% |
| !!! | TTCTGAATAATATTTGATTT+TGG | - | tig0018449:1665-1684 | Msa1366360:intron | 15.0% |
| !!! | ATAATATTTGATTTTGGTTT+TGG | - | tig0018449:1671-1690 | Msa1366360:intron | 15.0% |
| !! | ACAATTTCAAATTCAATATA+TGG | - | tig0018449:1855-1874 | Msa1366360:intron | 15.0% |
| !!! | TAATATTAGCTTATTAATCA+AGG | - | tig0018449:1974-1993 | Msa1366360:intron | 15.0% |
| !! | AATCAAACAAATTGATATTA+AGG | + | tig0018449:2471-2490 | None:intergenic | 15.0% |
| !!! | ATATTTTGTTAATTGCTATA+TGG | - | tig0018449:3089-3108 | Msa1366360:intron | 15.0% |
| !!! | TAATTTTAAATTTATGTGCA+GGG | + | tig0018449:3581-3600 | None:intergenic | 15.0% |
| !! | AATAAATACTAAACAACATA+TGG | + | tig0018449:4370-4389 | None:intergenic | 15.0% |
| !! | AATGAAACAATAAAAAAAGA+GGG | + | tig0018449:4444-4463 | None:intergenic | 15.0% |
| !! | TAATGAAACAATAAAAAAAG+AGG | + | tig0018449:4445-4464 | None:intergenic | 15.0% |
| !! | TCATTAAGAAATTGAAATTG+GGG | + | tig0018449:296-315 | None:intergenic | 20.0% |
| !! | CTTCATTAAGAAATTGAAAT+TGG | + | tig0018449:298-317 | None:intergenic | 20.0% |
| !! | CAATTTCAATTTCTTAATGA+AGG | - | tig0018449:296-315 | Msa1366360:intron | 20.0% |
| !!! | TTGTTGTTCTTAGAATAAAA+AGG | - | tig0018449:562-581 | Msa1366360:intron | 20.0% |
| !!! | ACTGTACTGTTTTATATATA+AGG | - | tig0018449:692-711 | Msa1366360:intron | 20.0% |
| !!! | TGAGTAAATTTTTGTAAGTT+TGG | - | tig0018449:801-820 | Msa1366360:intron | 20.0% |
| !! | AAATGAAGTATACTTCATAT+TGG | + | tig0018449:1079-1098 | None:intergenic | 20.0% |
| !!! | GTTAAATTTTCTGGATAAAA+AGG | + | tig0018449:1179-1198 | None:intergenic | 20.0% |
| !! | TGAATTATATGCAATGATTA+TGG | - | tig0018449:1631-1650 | Msa1366360:intron | 20.0% |
| !! | ATAAATTCAAACAACAAAAG+AGG | + | tig0018449:1706-1725 | None:intergenic | 20.0% |
| !!! | AATATGTTTGTTTTTGTGTT+TGG | - | tig0018449:1734-1753 | Msa1366360:intron | 20.0% |
| !!! | GTCATTTATAATTTTCTTCA+AGG | + | tig0018449:1932-1951 | None:intergenic | 20.0% |
| !! | AATTATAAATGACCAAATCA+AGG | - | tig0018449:1939-1958 | Msa1366360:intron | 20.0% |
| !! | ATATATTGAATGCATAATGA+TGG | + | tig0018449:2241-2260 | None:intergenic | 20.0% |
| !!! | AAAAGCATAAACTATTACAA+AGG | + | tig0018449:2289-2308 | None:intergenic | 20.0% |
| !!! | TTTGGATGATTTTGTATTAT+CGG | - | tig0018449:2589-2608 | Msa1366360:CDS | 20.0% |
| !!! | TGAATATGAATTTGGTTTTA+TGG | - | tig0018449:2656-2675 | Msa1366360:CDS | 20.0% |
| !!! | GAATATGAATTTGGTTTTAT+GGG | - | tig0018449:2657-2676 | Msa1366360:CDS | 20.0% |
| !!! | TTTTTTGATGTATGGTTTTA+TGG | - | tig0018449:2686-2705 | Msa1366360:CDS | 20.0% |
| !!! | TTTTTGATGTATGGTTTTAT+GGG | - | tig0018449:2687-2706 | Msa1366360:CDS | 20.0% |
| !!! | AATTTTTTTTTTTTGGTAGC+TGG | - | tig0018449:2798-2817 | Msa1366360:intron | 20.0% |
| !!! | ATTTTGAATTCTGTGTTTTT+AGG | - | tig0018449:2822-2841 | Msa1366360:intron | 20.0% |
| !!! | TTTAGGATTTGTTTAGTTTT+AGG | - | tig0018449:2839-2858 | Msa1366360:intron | 20.0% |
| !! | TAGGTATCAATCATATAAAA+TGG | - | tig0018449:2858-2877 | Msa1366360:CDS | 20.0% |
| !! | ATCAATCATATAAAATGGTT+AGG | - | tig0018449:2863-2882 | Msa1366360:CDS | 20.0% |
| !! | TCAATCATATAAAATGGTTA+GGG | - | tig0018449:2864-2883 | Msa1366360:CDS | 20.0% |
| !! | ATCATAAAGTAATTGAAATC+TGG | + | tig0018449:2964-2983 | None:intergenic | 20.0% |
| !! | TTCAATTACTTTATGATGAT+AGG | - | tig0018449:2967-2986 | Msa1366360:CDS | 20.0% |
| !!! | ATATCTGAAATCATGATTTT+TGG | + | tig0018449:3208-3227 | None:intergenic | 20.0% |
| !!! | ACATGATTTTTTTAACACAA+TGG | - | tig0018449:3262-3281 | Msa1366360:intron | 20.0% |
| !! | AATTTCTATCATTATATACC+AGG | + | tig0018449:3372-3391 | None:intergenic | 20.0% |
| !!! | CTAATTTTAAATTTATGTGC+AGG | + | tig0018449:3582-3601 | None:intergenic | 20.0% |
| !! | TCTTTATGCTTGAAAAATAT+TGG | - | tig0018449:4685-4704 | Msa1366360:five_prime_UTR | 20.0% |
| ! | ATTAGAAGCAAAGGAAATTA+AGG | - | tig0018449:210-229 | Msa1366360:three_prime_UTR | 25.0% |
| ! | AGAAAGCTTAATTGAAAGTA+TGG | - | tig0018449:356-375 | Msa1366360:intron | 25.0% |
| !! | GAAAGCTTAATTGAAAGTAT+GGG | - | tig0018449:357-376 | Msa1366360:intron | 25.0% |
| !! | AAAGCTTAATTGAAAGTATG+GGG | - | tig0018449:358-377 | Msa1366360:intron | 25.0% |
| !! | GTAAATTTTTGTACAAGTGA+TGG | - | tig0018449:422-441 | Msa1366360:intron | 25.0% |
| ! | ACACATGAGATATATCAATA+TGG | + | tig0018449:505-524 | None:intergenic | 25.0% |
| !!! | TATATAAGGTGATTTTGATC+TGG | - | tig0018449:706-725 | Msa1366360:intron | 25.0% |
| ! | ACATTCAATCCAAAGAATTA+TGG | + | tig0018449:775-794 | None:intergenic | 25.0% |
| ! | ATTTCTGTAAAATTTGAGTG+TGG | - | tig0018449:830-849 | Msa1366360:intron | 25.0% |
| !! | GTGTTTTATAAGGTTTTCTT+TGG | - | tig0018449:924-943 | Msa1366360:CDS | 25.0% |
| !!! | CAAGTTTTGGTTAAATTTTC+TGG | + | tig0018449:1188-1207 | None:intergenic | 25.0% |
| !!! | ATTTGATTTTGGTTTTGGTT+TGG | - | tig0018449:1676-1695 | Msa1366360:intron | 25.0% |
| !! | GGAGTTTTTACTTGAAAAAT+TGG | - | tig0018449:1809-1828 | Msa1366360:intron | 25.0% |
| !!! | TTCTGGTAATGATTTTGTAA+AGG | - | tig0018449:1885-1904 | Msa1366360:intron | 25.0% |
| ! | ATCTATAACTAACCTTGATT+TGG | + | tig0018449:1954-1973 | None:intergenic | 25.0% |
| ! | AAAGAACTAGAAGACATAAA+TGG | - | tig0018449:2100-2119 | Msa1366360:intron | 25.0% |
| ! | ACAGAGAATCATAAGAAAAA+GGG | - | tig0018449:2151-2170 | Msa1366360:intron | 25.0% |
| ! | ATTGAAAAATTTGCATCATG+AGG | - | tig0018449:2198-2217 | Msa1366360:intron | 25.0% |
| ! | GGAAAATGATAACTATTACA+CGG | + | tig0018449:2268-2287 | None:intergenic | 25.0% |
| ! | TTATACACTAGAGACTATAT+AGG | - | tig0018449:2348-2367 | Msa1366360:intron | 25.0% |
| ! | TTGAAGTAATTAAGCAACTT+TGG | + | tig0018449:2390-2409 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGAAATTTTGCGC+TGG | - | tig0018449:2496-2515 | Msa1366360:intron | 25.0% |
| !!! | TTTTTTTGAAATTTTGCGCT+GGG | - | tig0018449:2497-2516 | Msa1366360:intron | 25.0% |
| !!! | GATTATTGATTTTTTATCGG+TGG | - | tig0018449:2524-2543 | Msa1366360:intron | 25.0% |
| !! | AAAATTGAGAATTGGTTTAG+TGG | - | tig0018449:2549-2568 | Msa1366360:intron | 25.0% |
| !! | AAATTGAGAATTGGTTTAGT+GGG | - | tig0018449:2550-2569 | Msa1366360:intron | 25.0% |
| !! | TTTTTGAATGGCAAATATGT+TGG | - | tig0018449:2631-2650 | Msa1366360:CDS | 25.0% |
| !!! | TGTTGGTTTGAATATGAATT+TGG | - | tig0018449:2648-2667 | Msa1366360:CDS | 25.0% |
| !!! | GGTTTCTTTTTTTTGATGTA+TGG | - | tig0018449:2678-2697 | Msa1366360:CDS | 25.0% |
| ! | CAATCATATAAAATGGTTAG+GGG | - | tig0018449:2865-2884 | Msa1366360:CDS | 25.0% |
| ! | AAGAAAGATATAGAGATTAG+TGG | - | tig0018449:3031-3050 | Msa1366360:intron | 25.0% |
| ! | TATCTTCCAAAACTATAGAA+AGG | - | tig0018449:3122-3141 | Msa1366360:intron | 25.0% |
| !! | TGTTGTTGTTGAGTTTAAAA+CGG | + | tig0018449:3159-3178 | None:intergenic | 25.0% |
| !!! | TTGGTTGATGTTATTTTTCA+TGG | + | tig0018449:3189-3208 | None:intergenic | 25.0% |
| ! | AAGAAGTAATAACCAGTATA+TGG | + | tig0018449:3347-3366 | None:intergenic | 25.0% |
| !!! | TTTTCCATAAAAAGCATCTA+AGG | + | tig0018449:3399-3418 | None:intergenic | 25.0% |
| !!! | ATATAGCATTGATATAAGCA+AGG | + | tig0018449:3485-3504 | None:intergenic | 25.0% |
| ! | ATAATGTGTATATCCATTGT+AGG | - | tig0018449:3779-3798 | Msa1366360:intron | 25.0% |
| ! | TTGCTTCTTGCTTAAATTTA+TGG | - | tig0018449:4330-4349 | Msa1366360:intron | 25.0% |
| ! | AACAATAAAAAAAGAGGGAT+GGG | + | tig0018449:4439-4458 | None:intergenic | 25.0% |
| ! | AAACAATAAAAAAAGAGGGA+TGG | + | tig0018449:4440-4459 | None:intergenic | 25.0% |
| ! | TTAAGTTCTGTTATGGTAAA+TGG | - | tig0018449:4582-4601 | Msa1366360:five_prime_UTR | 25.0% |
| ! | TGACATAATTATAGCAGAAA+TGG | + | tig0018449:4622-4641 | None:intergenic | 25.0% |
| ! | AAGCTTAATTGAAAGTATGG+GGG | - | tig0018449:359-378 | Msa1366360:intron | 30.0% |
| GGTAAATCATTTCTGTTTGA+TGG | - | tig0018449:443-462 | Msa1366360:intron | 30.0% | |
| GGAGATTTAAGAAGATATGA+AGG | - | tig0018449:583-602 | Msa1366360:intron | 30.0% | |
| GTTGTTTAAGCACCTTAAAA+TGG | - | tig0018449:657-676 | Msa1366360:intron | 30.0% | |
| ! | GTCACGAAAAATCCATTTTA+AGG | + | tig0018449:672-691 | None:intergenic | 30.0% |
| TTCTTTGGATTGAATGTTAG+AGG | - | tig0018449:778-797 | Msa1366360:intron | 30.0% | |
| !! | TAATCATGAAACTAGCTCTA+TGG | - | tig0018449:868-887 | Msa1366360:intron | 30.0% |
| !! | AATCATGAAACTAGCTCTAT+GGG | - | tig0018449:869-888 | Msa1366360:intron | 30.0% |
| ! | TCTCTGTTGTGTGTTTTATA+AGG | - | tig0018449:914-933 | Msa1366360:intron | 30.0% |
| CAGCATTGTATATGCATAAA+AGG | + | tig0018449:1412-1431 | None:intergenic | 30.0% | |
| TTAGTTGTGTGTCTTAAATG+AGG | - | tig0018449:1444-1463 | Msa1366360:intron | 30.0% | |
| !!! | TGGAATTGTTTTGAAACCAT+CGG | + | tig0018449:1517-1536 | None:intergenic | 30.0% |
| ! | AGAATGGTGATGATAAGTAT+TGG | + | tig0018449:1537-1556 | None:intergenic | 30.0% |
| ATTCCTACAAGTTTGAAGAA+TGG | + | tig0018449:1553-1572 | None:intergenic | 30.0% | |
| TTGTTGAAATGTCGAAAACT+TGG | - | tig0018449:1774-1793 | Msa1366360:intron | 30.0% | |
| AAAACTTGGAACAGATTAGA+GGG | - | tig0018449:1788-1807 | Msa1366360:intron | 30.0% | |
| TTTCTTCAAGGATTCATAGT+TGG | + | tig0018449:1920-1939 | None:intergenic | 30.0% | |
| !! | CTTTTGAAAAGAGAAGAGAA+TGG | - | tig0018449:2044-2063 | Msa1366360:intron | 30.0% |
| GACAGAGAATCATAAGAAAA+AGG | - | tig0018449:2150-2169 | Msa1366360:intron | 30.0% | |
| TTAACATAGACTCATAGCTA+TGG | + | tig0018449:2328-2347 | None:intergenic | 30.0% | |
| ! | TGATTTTGTATTATCGGTGT+TGG | - | tig0018449:2595-2614 | Msa1366360:CDS | 30.0% |
| TTCGTCAGATTTGATGAAAT+TGG | - | tig0018449:2731-2750 | Msa1366360:CDS | 30.0% | |
| TCGTCAGATTTGATGAAATT+GGG | - | tig0018449:2732-2751 | Msa1366360:CDS | 30.0% | |
| ! | TCTCTATGAATCAGTTGATA+TGG | - | tig0018449:2916-2935 | Msa1366360:CDS | 30.0% |
| ! | GGAATTTGTTCAGATTTGTT+TGG | - | tig0018449:3052-3071 | Msa1366360:intron | 30.0% |
| ! | GAAGTTCCTTTCTATAGTTT+TGG | + | tig0018449:3131-3150 | None:intergenic | 30.0% |
| ! | GTTGTTGTTGAGTTTAAAAC+GGG | + | tig0018449:3158-3177 | None:intergenic | 30.0% |
| !!! | GTTGATGTTATTTTTCATGG+AGG | + | tig0018449:3186-3205 | None:intergenic | 30.0% |
| ! | TTTTTGTCTGCCATTCTTAT+AGG | - | tig0018449:3307-3326 | Msa1366360:intron | 30.0% |
| ! | TGGTTTGTAAATCCATATAC+TGG | - | tig0018449:3332-3351 | Msa1366360:intron | 30.0% |
| !! | ATGTCCTTAGATGCTTTTTA+TGG | - | tig0018449:3392-3411 | Msa1366360:intron | 30.0% |
| ! | CTTTTTATGGAAAATGTCGT+CGG | - | tig0018449:3405-3424 | Msa1366360:intron | 30.0% |
| GAATTTGATGCAGAAATAGT+GGG | + | tig0018449:3547-3566 | None:intergenic | 30.0% | |
| AGAATTTGATGCAGAAATAG+TGG | + | tig0018449:3548-3567 | None:intergenic | 30.0% | |
| TAAAATTAGTTACTTCCCTC+TGG | - | tig0018449:3593-3612 | Msa1366360:intron | 30.0% | |
| AAAATTAGTTACTTCCCTCT+GGG | - | tig0018449:3594-3613 | Msa1366360:intron | 30.0% | |
| TGGATATACACATTATTAGC+TGG | + | tig0018449:3775-3794 | None:intergenic | 30.0% | |
| TGTATATCCATTGTAGGTTT+CGG | - | tig0018449:3785-3804 | Msa1366360:intron | 30.0% | |
| GTTGTTTGAATTGCGAAAAT+TGG | - | tig0018449:3980-3999 | Msa1366360:intron | 30.0% | |
| ! | TCCATTTCTTTTTCTTGCTA+TGG | - | tig0018449:4063-4082 | Msa1366360:intron | 30.0% |
| TTAAAATCGATGCTTTACTG+AGG | - | tig0018449:4146-4165 | Msa1366360:intron | 30.0% | |
| TAAAATCGATGCTTTACTGA+GGG | - | tig0018449:4147-4166 | Msa1366360:intron | 30.0% | |
| CATAATCAAACCTGAAATCT+AGG | - | tig0018449:4508-4527 | Msa1366360:intron | 30.0% | |
| !!! | GCAGATTTTAAGTTCTGTTA+TGG | - | tig0018449:4575-4594 | Msa1366360:intron | 30.0% |
| ATAATTATAGCAGAAATGGC+AGG | + | tig0018449:4618-4637 | None:intergenic | 30.0% | |
| TGTAATTGCGTCATATAATG+AGG | - | tig0018449:4650-4669 | Msa1366360:five_prime_UTR | 30.0% | |
| CCTTTGCTTCTAATGCAAAT+CGG | + | tig0018449:204-223 | None:intergenic | 35.0% | |
| TTGGTTGAGTAAGAAAAGAG+AGG | + | tig0018449:256-275 | None:intergenic | 35.0% | |
| ATTGAAATTGGGGCTGAAAA+GGG | + | tig0018449:286-305 | None:intergenic | 35.0% | |
| AATTGAAATTGGGGCTGAAA+AGG | + | tig0018449:287-306 | None:intergenic | 35.0% | |
| GAGGAAGAAACAAGAAGAAT+TGG | - | tig0018449:397-416 | Msa1366360:intron | 35.0% | |
| GAAGAAACAAGAAGAATTGG+AGG | - | tig0018449:400-419 | Msa1366360:intron | 35.0% | |
| ATGATTACTACTTCTGTTGC+AGG | - | tig0018449:733-752 | Msa1366360:intron | 35.0% | |
| ! | GGTTTGGTTCCATAATTCTT+TGG | - | tig0018449:763-782 | Msa1366360:intron | 35.0% |
| !! | TCAACTACAGCTTCAAGTTT+TGG | + | tig0018449:1201-1220 | None:intergenic | 35.0% |
| AAAATTATGCAGCTGCAAGT+GGG | - | tig0018449:1287-1306 | Msa1366360:intron | 35.0% | |
| TCACCATTCTTCAAACTTGT+AGG | - | tig0018449:1547-1566 | Msa1366360:intron | 35.0% | |
| AAACTTGTAGGAATGATGAG+TGG | - | tig0018449:1559-1578 | Msa1366360:intron | 35.0% | |
| TGATGAGTGGATCATAAAGA+AGG | - | tig0018449:1572-1591 | Msa1366360:intron | 35.0% | |
| GAAAACTTGGAACAGATTAG+AGG | - | tig0018449:1787-1806 | Msa1366360:intron | 35.0% | |
| CAATATATGGAAAGAGCTTC+TGG | - | tig0018449:1868-1887 | Msa1366360:intron | 35.0% | |
| TGAAAAGAGAAGAGAATGGA+TGG | - | tig0018449:2048-2067 | Msa1366360:intron | 35.0% | |
| TTTCACACCATGTCTTACTT+TGG | + | tig0018449:2083-2102 | None:intergenic | 35.0% | |
| AAAAGGGTGAAGCATATCAA+AGG | - | tig0018449:2167-2186 | Msa1366360:intron | 35.0% | |
| GAAAAATTTGCATCATGAGG+AGG | - | tig0018449:2201-2220 | Msa1366360:intron | 35.0% | |
| CGGTGGAAAAAATTGAGAAT+TGG | - | tig0018449:2541-2560 | Msa1366360:intron | 35.0% | |
| TATGGGTTTCATGTGTTTGT+TGG | - | tig0018449:2704-2723 | Msa1366360:CDS | 35.0% | |
| GAAATTGGGTGTTCTTATTG+AGG | - | tig0018449:2746-2765 | Msa1366360:intron | 35.0% | |
| !!! | GATGTTATTTTTCATGGAGG+TGG | + | tig0018449:3183-3202 | None:intergenic | 35.0% |
| ACAAACCATGCCTATAAGAA+TGG | + | tig0018449:3320-3339 | None:intergenic | 35.0% | |
| ! | CTGGTTATTACTTCTTTTCC+TGG | - | tig0018449:3351-3370 | Msa1366360:intron | 35.0% |
| !! | CATATCAGTTGGTCTTAACA+TGG | - | tig0018449:3631-3650 | Msa1366360:intron | 35.0% |
| TCTTAACATGGCTTAAGCTT+TGG | - | tig0018449:3643-3662 | Msa1366360:intron | 35.0% | |
| AAGAATGATACAGAAAGCGA+CGG | + | tig0018449:3721-3740 | None:intergenic | 35.0% | |
| CTATTAAGCAGTCAAGACAA+TGG | - | tig0018449:3835-3854 | Msa1366360:intron | 35.0% | |
| !!! | GTCTGTTTTAGCTTTTACCA+GGG | - | tig0018449:4002-4021 | Msa1366360:intron | 35.0% |
| !!! | TTTAGCTTTTACCAGGGTAT+AGG | - | tig0018449:4008-4027 | Msa1366360:intron | 35.0% |
| GCCATAGCAAGAAAAAGAAA+TGG | + | tig0018449:4067-4086 | None:intergenic | 35.0% | |
| TACTGCGTTTATAATGCATG+TGG | - | tig0018449:4252-4271 | Msa1366360:intron | 35.0% | |
| ! | AAATATGTGCCACTGATAGA+GGG | + | tig0018449:4408-4427 | None:intergenic | 35.0% |
| AGTTCTGTTATGGTAAATGG+CGG | - | tig0018449:4585-4604 | Msa1366360:five_prime_UTR | 35.0% | |
| TAATGCAAATCGGTGCAGAT+CGG | + | tig0018449:194-213 | None:intergenic | 40.0% | |
| ! | CCGATTTGCATTAGAAGCAA+AGG | - | tig0018449:201-220 | Msa1366360:three_prime_UTR | 40.0% |
| ! | TTAATTGAAAGTATGGGGGC+TGG | - | tig0018449:363-382 | Msa1366360:intron | 40.0% |
| ! | TAATTGAAAGTATGGGGGCT+GGG | - | tig0018449:364-383 | Msa1366360:intron | 40.0% |
| ACTTCTGTTGCAGGAAACAT+TGG | - | tig0018449:742-761 | Msa1366360:intron | 40.0% | |
| ! | TGTTGCAGGAAACATTGGTT+TGG | - | tig0018449:747-766 | Msa1366360:intron | 40.0% |
| GAAAATTATGCAGCTGCAAG+TGG | - | tig0018449:1286-1305 | Msa1366360:intron | 40.0% | |
| ! | TGAGAATTGGTTTAGTGGGT+CGG | - | tig0018449:2554-2573 | Msa1366360:intron | 40.0% |
| !! | GGTCGGTGAAAGTTTGTTTT+TGG | - | tig0018449:2571-2590 | Msa1366360:intron | 40.0% |
| GTACTTTCAGGCATATCAGT+TGG | - | tig0018449:3620-3639 | Msa1366360:intron | 40.0% | |
| !! | GTTTTGACCGAAACCTACAA+TGG | + | tig0018449:3795-3814 | None:intergenic | 40.0% |
| AGCAAGTTCTTCAAGCCTTT+GGG | + | tig0018449:3817-3836 | None:intergenic | 40.0% | |
| TAGCAAGTTCTTCAAGCCTT+TGG | + | tig0018449:3818-3837 | None:intergenic | 40.0% | |
| !! | ACCAAAGCCTTAGGTATTGA+CGG | + | tig0018449:3873-3892 | None:intergenic | 40.0% |
| AGTTTACTCACCAAAGCCTT+AGG | + | tig0018449:3882-3901 | None:intergenic | 40.0% | |
| !!! | GGTCTGTTTTAGCTTTTACC+AGG | - | tig0018449:4001-4020 | Msa1366360:intron | 40.0% |
| TGCTATGGCGCGTTATTTAA+TGG | - | tig0018449:4078-4097 | Msa1366360:intron | 40.0% | |
| ! | CAAATATGTGCCACTGATAG+AGG | + | tig0018449:4409-4428 | None:intergenic | 40.0% |
| CTCTATCAGTGGCACATATT+TGG | - | tig0018449:4407-4426 | Msa1366360:five_prime_UTR | 40.0% | |
| TAAAGCAACGCCTAGATTTC+AGG | + | tig0018449:4521-4540 | None:intergenic | 40.0% | |
| ATTGGGGCTGAAAAGGGTTA+GGG | + | tig0018449:280-299 | None:intergenic | 45.0% | |
| AATTGGGGCTGAAAAGGGTT+AGG | + | tig0018449:281-300 | None:intergenic | 45.0% | |
| TGCAATAGCAGATGTGTTGC+AGG | - | tig0018449:954-973 | Msa1366360:CDS | 45.0% | |
| ATAGCAGATGTGTTGCAGGA+AGG | - | tig0018449:958-977 | Msa1366360:CDS | 45.0% | |
| TCTGCAGTCGAAATTGTGAC+TGG | - | tig0018449:1360-1379 | Msa1366360:intron | 45.0% | |
| TGTGCCACCAAAGTAAGACA+TGG | - | tig0018449:2073-2092 | Msa1366360:intron | 45.0% | |
| CACACCATGTCTTACTTTGG+TGG | + | tig0018449:2080-2099 | None:intergenic | 45.0% | |
| GTCTGCCATTCTTATAGGCA+TGG | - | tig0018449:3312-3331 | Msa1366360:intron | 45.0% | |
| GGAATTGACTGAGATCGAGA+TGG | + | tig0018449:3677-3696 | None:intergenic | 45.0% | |
| TCGATCTCAGTCAATTCCTC+AGG | - | tig0018449:3679-3698 | Msa1366360:intron | 45.0% | |
| AGGTTTCGGTCAAAACCCAA+AGG | - | tig0018449:3799-3818 | Msa1366360:intron | 45.0% | |
| !! | TTAGGTATTGACGGTGTCAC+TGG | + | tig0018449:3864-3883 | None:intergenic | 45.0% |
| AGTGACACCGTCAATACCTA+AGG | - | tig0018449:3863-3882 | Msa1366360:intron | 45.0% | |
| ACCGTCAATACCTAAGGCTT+TGG | - | tig0018449:3869-3888 | Msa1366360:intron | 45.0% | |
| ! | AATTAGCCGACTCCACTTAG+TGG | - | tig0018449:3940-3959 | Msa1366360:intron | 45.0% |
| ! | ATTAGCCGACTCCACTTAGT+GGG | - | tig0018449:3941-3960 | Msa1366360:intron | 45.0% |
| CTTATCCCACTAAGTGGAGT+CGG | + | tig0018449:3949-3968 | None:intergenic | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | + | tig0018449:3955-3974 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | - | tig0018449:3952-3971 | Msa1366360:intron | 45.0% | |
| CTTCAGGAAATCCTATACCC+TGG | + | tig0018449:4022-4041 | None:intergenic | 45.0% | |
| GGGTATAGGATTTCCTGAAG+TGG | - | tig0018449:4022-4041 | Msa1366360:five_prime_UTR | 45.0% | |
| !! | TCCTGAAGTGGTTTTGCACT+TGG | - | tig0018449:4034-4053 | Msa1366360:five_prime_UTR | 45.0% |
| !! | CCTGAAGTGGTTTTGCACTT+GGG | - | tig0018449:4035-4054 | Msa1366360:five_prime_UTR | 45.0% |
| AATCGATGCTTTACTGAGGG+TGG | - | tig0018449:4150-4169 | Msa1366360:intron | 45.0% | |
| ATCGATGCTTTACTGAGGGT+GGG | - | tig0018449:4151-4170 | Msa1366360:intron | 45.0% | |
| ! | TTTACTGAGGGTGGGTTTCT+AGG | - | tig0018449:4159-4178 | Msa1366360:intron | 45.0% |
| ! | TTACTGAGGGTGGGTTTCTA+GGG | - | tig0018449:4160-4179 | Msa1366360:intron | 45.0% |
| ATTAGTCCCCAACGACACTA+TGG | - | tig0018449:4540-4559 | Msa1366360:intron | 45.0% | |
| AGAAGAGCTGAAAGAGAGCG+AGG | - | tig0018449:101-120 | Msa1366360:three_prime_UTR | 50.0% | |
| GAAGAGCTGAAAGAGAGCGA+GGG | - | tig0018449:102-121 | Msa1366360:three_prime_UTR | 50.0% | |
| GGCTGAAAAGGGTTAGGGTT+TGG | + | tig0018449:275-294 | None:intergenic | 50.0% | |
| GCAGGAAGGAGAAGCTATTG+AGG | - | tig0018449:972-991 | Msa1366360:CDS | 50.0% | |
| GCGATTCGTCATAGTTCCGA+TGG | - | tig0018449:1498-1517 | Msa1366360:intron | 50.0% | |
| ! | CCTGAAAGTACAGACCCAGA+GGG | + | tig0018449:3611-3630 | None:intergenic | 50.0% |
| ! | CATGGCTTAAGCTTTGGTGC+AGG | - | tig0018449:3649-3668 | Msa1366360:intron | 50.0% |
| ACAGCTAGCTCAACTACCTG+AGG | + | tig0018449:3698-3717 | None:intergenic | 50.0% | |
| CCCAAGTGCAAAACCACTTC+AGG | + | tig0018449:4038-4057 | None:intergenic | 50.0% | |
| GATAGAGGGTGGCTAAGAGA+GGG | + | tig0018449:4394-4413 | None:intergenic | 50.0% | |
| TGATAGAGGGTGGCTAAGAG+AGG | + | tig0018449:4395-4414 | None:intergenic | 50.0% | |
| TCTTAGCCACCCTCTATCAG+TGG | - | tig0018449:4396-4415 | Msa1366360:five_prime_UTR | 50.0% | |
| ! | TATGTGCCACTGATAGAGGG+TGG | + | tig0018449:4405-4424 | None:intergenic | 50.0% |
| !! | GTGCAGATCGGAGTGTTGGA+CGG | + | tig0018449:182-201 | None:intergenic | 55.0% |
| ATCGGTGCAGATCGGAGTGT+TGG | + | tig0018449:186-205 | None:intergenic | 55.0% | |
| ATGGGGGCTGGGTTTGCAAT+TGG | - | tig0018449:375-394 | Msa1366360:intron | 55.0% | |
| CCCTCTGGGTCTGTACTTTC+AGG | - | tig0018449:3608-3627 | Msa1366360:intron | 55.0% | |
| ! | GCCTGAAAGTACAGACCCAG+AGG | + | tig0018449:3612-3631 | None:intergenic | 55.0% |
| AGTCCCCAACGACACTATGG+CGG | - | tig0018449:4543-4562 | Msa1366360:intron | 55.0% | |
| ! | AACCCGCCATAGTGTCGTTG+GGG | + | tig0018449:4549-4568 | None:intergenic | 55.0% |
| ! | CAACCCGCCATAGTGTCGTT+GGG | + | tig0018449:4550-4569 | None:intergenic | 55.0% |
| ACAACCCGCCATAGTGTCGT+TGG | + | tig0018449:4551-4570 | None:intergenic | 55.0% | |
| !! | AACGACACTATGGCGGGTTG+TGG | - | tig0018449:4550-4569 | Msa1366360:intron | 55.0% |
| CTGAAAGAGAGCGAGGGTCG+CGG | - | tig0018449:108-127 | Msa1366360:three_prime_UTR | 60.0% | |
| TGAAAGAGAGCGAGGGTCGC+GGG | - | tig0018449:109-128 | Msa1366360:three_prime_UTR | 60.0% | |
| GGGGCTGGGTTTGCAATTGG+AGG | - | tig0018449:378-397 | Msa1366360:intron | 60.0% | |
| ! | CTGAGGGTGGGTTTCTAGGG+AGG | - | tig0018449:4163-4182 | Msa1366360:intron | 60.0% |
| GTCCCCAACGACACTATGGC+GGG | - | tig0018449:4544-4563 | Msa1366360:intron | 60.0% | |
| !! | GACACTATGGCGGGTTGTGG+TGG | - | tig0018449:4553-4572 | Msa1366360:intron | 60.0% |
| AGAGGGTCGCCGGGAGAGAA+AGG | - | tig0018449:137-156 | Msa1366360:three_prime_UTR | 65.0% | |
| GAGGGTCGCCGGGAGAGAAA+GGG | - | tig0018449:138-157 | Msa1366360:three_prime_UTR | 65.0% | |
| GTGTTGGACGGCGAGGTCGA+CGG | + | tig0018449:170-189 | None:intergenic | 65.0% | |
| !! | GATCGGAGTGTTGGACGGCG+AGG | + | tig0018449:177-196 | None:intergenic | 65.0% |
| GAGGGTCGCGGGAGAGGAGA+GGG | - | tig0018449:120-139 | Msa1366360:three_prime_UTR | 70.0% | |
| GGCGGCGACCCTTTCTCTCC+CGG | + | tig0018449:149-168 | None:intergenic | 70.0% | |
| TTGGACGGCGAGGTCGACGG+CGG | + | tig0018449:167-186 | None:intergenic | 70.0% | |
| GAGAGCGAGGGTCGCGGGAG+AGG | - | tig0018449:114-133 | Msa1366360:three_prime_UTR | 75.0% | |
| CGAGGGTCGCGGGAGAGGAG+AGG | - | tig0018449:119-138 | Msa1366360:three_prime_UTR | 75.0% | |
| GCGGGAGAGGAGAGGGTCGC+CGG | - | tig0018449:127-146 | Msa1366360:three_prime_UTR | 75.0% | |
| CGGGAGAGGAGAGGGTCGCC+GGG | - | tig0018449:128-147 | Msa1366360:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018449 | gene | 84 | 4726 | 84 | ID=Msa1366360;Name=Msa1366360 |
| tig0018449 | mRNA | 84 | 4726 | 84 | ID=Msa1366360-mRNA-1;Parent=Msa1366360;Name=Msa1366360-mRNA-1;_AED=0.36;_eAED=0.36;_QI=318|0.75|0.77|1|0.37|0.33|9|182|156 |
| tig0018449 | exon | 84 | 280 | 84 | ID=Msa1366360-mRNA-1:exon:15119;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 920 | 1009 | 920 | ID=Msa1366360-mRNA-1:exon:15118;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 1110 | 1139 | 1110 | ID=Msa1366360-mRNA-1:exon:15117;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 2588 | 2755 | 2588 | ID=Msa1366360-mRNA-1:exon:15116;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 2850 | 3008 | 2850 | ID=Msa1366360-mRNA-1:exon:15115;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 4011 | 4055 | 4011 | ID=Msa1366360-mRNA-1:exon:15114;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 4206 | 4235 | 4206 | ID=Msa1366360-mRNA-1:exon:15113;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 4389 | 4492 | 4389 | ID=Msa1366360-mRNA-1:exon:15112;Parent=Msa1366360-mRNA-1 |
| tig0018449 | exon | 4579 | 4726 | 4579 | ID=Msa1366360-mRNA-1:exon:15111;Parent=Msa1366360-mRNA-1 |
| tig0018449 | five_prime_UTR | 4579 | 4726 | 4579 | ID=Msa1366360-mRNA-1:five_prime_utr;Parent=Msa1366360-mRNA-1 |
| tig0018449 | five_prime_UTR | 4389 | 4492 | 4389 | ID=Msa1366360-mRNA-1:five_prime_utr;Parent=Msa1366360-mRNA-1 |
| tig0018449 | five_prime_UTR | 4206 | 4235 | 4206 | ID=Msa1366360-mRNA-1:five_prime_utr;Parent=Msa1366360-mRNA-1 |
| tig0018449 | five_prime_UTR | 4020 | 4055 | 4020 | ID=Msa1366360-mRNA-1:five_prime_utr;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 4011 | 4019 | 4011 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 2850 | 3008 | 2850 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 2588 | 2755 | 2588 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 1110 | 1139 | 1110 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 920 | 1009 | 920 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | CDS | 266 | 280 | 266 | ID=Msa1366360-mRNA-1:cds;Parent=Msa1366360-mRNA-1 |
| tig0018449 | three_prime_UTR | 84 | 265 | 84 | ID=Msa1366360-mRNA-1:three_prime_utr;Parent=Msa1366360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
