AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1377480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377480 MtrunA17_Chr4g0069141 46.091 243 51 7 1 173 1919 2151 5.91e-44 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377480 AT3G17360.2 34.416 154 43 3 76 172 1835 1987 5.94e-14 70.1
Msa1377480 AT3G17360.3 34.416 154 43 3 76 172 1836 1988 6.23e-14 70.1
Msa1377480 AT3G17360.1 34.416 154 43 3 76 172 1827 1979 6.41e-14 70.1

Find 105 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTTATCTTTAGGTTTC+TGG 0.087699 tig0019933:-28126 Msa1377470:intron
GACAAGGTTAAAACACTAAT+TGG 0.174848 tig0019933:+34377 Msa1377480:exon
TGTGTGATTCTTTGTGATTC+TGG 0.197264 tig0019933:-29359 None:intergenic
CTGGGTGGTTGCCTACATTA+GGG 0.221374 tig0019933:-29838 None:intergenic
AATTACTTACTTCTCTTCTT+TGG 0.243975 tig0019933:-29447 None:intergenic
TTATAGGGGAGCTCAAAATT+TGG 0.249041 tig0019933:+34534 Msa1377480:intron
TGCAGGCTTACTCTTCTTCT+TGG 0.252242 tig0019933:-28351 Msa1377470:intron
GCTGGGTGGTTGCCTACATT+AGG 0.259644 tig0019933:-29839 None:intergenic
TGCTTGCCGTTTCTTTGTTC+AGG 0.264319 tig0019933:-29307 None:intergenic
CTAAATTAACGATTTGGTTT+TGG 0.278646 tig0019933:-33431 None:intergenic
TCTATTCATGGTACTTATAG+TGG 0.312943 tig0019933:+34883 Msa1377480:three_prime_UTR
CCTCCACTAAATTAACGATT+TGG 0.329819 tig0019933:-33437 None:intergenic
GATGAGGAAGATTGCAGAAT+TGG 0.336343 tig0019933:+34352 Msa1377480:CDS
CCCACAATCATCAAAGATTA+AGG 0.352941 tig0019933:+34421 Msa1377480:three_prime_UTR
AAATCAATTACAATAACAAT+TGG 0.357235 tig0019933:-29779 None:intergenic
CACAGCAAAATCGCCGTTAC+GGG 0.358888 tig0019933:-29654 None:intergenic
TCTGCTGGTACTGCAATGTT+TGG 0.363274 tig0019933:-29993 None:intergenic
AATAAAACCGGAACTTGTAT+TGG 0.365241 tig0019933:-30025 None:intergenic
ATGAAGTTCCAGTACTTTGC+TGG 0.365608 tig0019933:-29857 None:intergenic
ACTCAGTACCGCAAATCTTC+TGG 0.368029 tig0019933:+34625 Msa1377480:three_prime_UTR
TATAGGGGAGCTCAAAATTT+GGG 0.374728 tig0019933:+34535 Msa1377480:intron
TGGTCCATAAGATTTGGTTC+TGG 0.377829 tig0019933:-33411 None:intergenic
AAACCAAATCGTTAATTTAG+TGG 0.391118 tig0019933:+33434 Msa1377480:CDS
ATCTTCTCGGCACGCTGTCA+AGG 0.391650 tig0019933:-28048 Msa1377470:CDS
GGCACCAACATCAGAGAAAT+GGG 0.398626 tig0019933:+30156 Msa1377480:CDS
TAGACCAGAACCAAATCTTA+TGG 0.402408 tig0019933:+33407 Msa1377480:CDS
GAAAATTCAGTAATTTGAAC+AGG 0.403690 tig0019933:-29590 None:intergenic
TGGCACCAACATCAGAGAAA+TGG 0.406847 tig0019933:+30155 Msa1377480:CDS
CCTTAATCTTTGATGATTGT+GGG 0.411896 tig0019933:-34421 None:intergenic
CGGTACCGGGATTGCGGTAT+CGG 0.416102 tig0019933:-29724 None:intergenic
TACTTACTTCTCTTCTTTGG+TGG 0.417356 tig0019933:-29444 None:intergenic
CTGCTGGTACTGCAATGTTT+GGG 0.422711 tig0019933:-29992 None:intergenic
TTTGCCTTTCATTCATTGGT+GGG 0.422716 tig0019933:+34823 Msa1377480:three_prime_UTR
ACCTTAATCTTTGATGATTG+TGG 0.425263 tig0019933:-34422 None:intergenic
GTACGTACCAATACAAGTTC+CGG 0.433800 tig0019933:+30018 Msa1377480:CDS
TTTCCCCATTTCTCTGATGT+TGG 0.434953 tig0019933:-30160 None:intergenic
TGAAAACTATTCAATAAAAC+CGG 0.437194 tig0019933:-30037 None:intergenic
AAAGCAACTGATCTCGCTCT+TGG 0.438606 tig0019933:-34179 None:intergenic
GTTTCCCTGACTGTCATCTC+AGG 0.441748 tig0019933:+28078 Msa1377480:five_prime_UTR
TTACTTCTCTTCTTTGGTGG+TGG 0.442967 tig0019933:-29441 None:intergenic
TGGGAAAACTACCTTACTAA+TGG 0.444047 tig0019933:-28312 Msa1377470:intron
AGTAATTTGAACAGGAGAAA+AGG 0.444493 tig0019933:-29582 None:intergenic
TCCAGCCAATGCCATTAGTA+AGG 0.447344 tig0019933:+28301 Msa1377480:five_prime_UTR
AAGCACAAGAATACAAGAAC+AGG 0.447516 tig0019933:-29536 None:intergenic
TCTTCTCGGCACGCTGTCAA+GGG 0.447635 tig0019933:-28047 Msa1377470:CDS
GAAATGTTGAGGGTACTACT+AGG 0.450071 tig0019933:+34213 Msa1377480:CDS
TCACAGCAAAATCGCCGTTA+CGG 0.450237 tig0019933:-29655 None:intergenic
AATTGGGCCTGCTGTAATCA+AGG 0.451996 tig0019933:-29762 None:intergenic
ACAAGGTTAAAACACTAATT+GGG 0.476301 tig0019933:+34378 Msa1377480:exon
TCTGGAGAAATCTGCTACAA+TGG 0.479073 tig0019933:-28108 Msa1377470:CDS
GCAACCACCCAGCAAAGTAC+TGG 0.480257 tig0019933:+29849 Msa1377480:five_prime_UTR
AATACAAGAACAGGAGAAGA+AGG 0.486921 tig0019933:-29527 None:intergenic
TTTGAAACCTTGATTACAGC+AGG 0.488852 tig0019933:+29755 Msa1377480:five_prime_UTR
CAAGGGGTTGGAAGCAGAGC+TGG 0.492175 tig0019933:-28030 Msa1377470:intron
ACATTCCTGAGATGACAGTC+AGG 0.493232 tig0019933:-28083 Msa1377470:CDS
GCGGCATTTCGCGCCCGTAA+CGG 0.495499 tig0019933:+29641 Msa1377480:five_prime_UTR
TTCAGACTGTGACAACCTCT+TGG 0.496348 tig0019933:-34572 None:intergenic
AACGAACAAGAAGCAAGAAA+CGG 0.501255 tig0019933:+29331 Msa1377480:five_prime_UTR
TCGGCACGCTGTCAAGGGGT+TGG 0.501916 tig0019933:-28042 Msa1377470:CDS
AACTATCACCAGAAGATTTG+CGG 0.503338 tig0019933:-34633 None:intergenic
GGAAACAATTGACATCTTCT+CGG 0.503883 tig0019933:-28061 Msa1377470:CDS
AATCAATTACAATAACAATT+GGG 0.509855 tig0019933:-29778 None:intergenic
TGCGCAAAATGAAATGTTGA+GGG 0.511177 tig0019933:+34203 Msa1377480:CDS
AAGTCTGAAACGGCATTTCG+CGG 0.521788 tig0019933:+29613 Msa1377480:five_prime_UTR
GGCTGCCGATACCGCAATCC+CGG 0.522072 tig0019933:+29719 Msa1377480:five_prime_UTR
ACCTTACTAATGGCATTGGC+TGG 0.522979 tig0019933:-28302 Msa1377470:intron
GAGAGAAGAGTTCTTTGCAA+AGG 0.525760 tig0019933:+33473 Msa1377480:CDS
TTTCTCTGATGTTGGTGCCA+TGG 0.529237 tig0019933:-30152 None:intergenic
CGCAAACCTGAACAAAGAAA+CGG 0.530042 tig0019933:+29301 Msa1377480:intron
AACTACCTTACTAATGGCAT+TGG 0.530883 tig0019933:-28306 Msa1377470:intron
ACGGATCGGTACCGGGATTG+CGG 0.533685 tig0019933:-29730 None:intergenic
TGAAAACGCAGAGAAAGATC+AGG 0.533870 tig0019933:+29889 Msa1377480:CDS
TGAAGTTCCAGTACTTTGCT+GGG 0.534727 tig0019933:-29856 None:intergenic
TATTGGTACGTACCATCTGC+TGG 0.537390 tig0019933:-30008 None:intergenic
TTGGTCCGTCCACCTAGATG+TGG 0.539246 tig0019933:-28332 Msa1377470:intron
CTGCGCAAAATGAAATGTTG+AGG 0.552917 tig0019933:+34202 Msa1377480:CDS
CTGCAATCTTCCTCATCAGA+TGG 0.555806 tig0019933:-34346 None:intergenic
TTGCCTTTCATTCATTGGTG+GGG 0.556972 tig0019933:+34824 Msa1377480:three_prime_UTR
CAACCCCACCAATGAATGAA+AGG 0.562934 tig0019933:-34827 None:intergenic
TGGGTGGTTGCCTACATTAG+GGG 0.566108 tig0019933:-29837 None:intergenic
TCTTCTGGTGATAGTTTGCA+CGG 0.571454 tig0019933:+34640 Msa1377480:three_prime_UTR
TGATCAATCAATTATACAGA+TGG 0.574847 tig0019933:-34725 None:intergenic
ACGGGCGCGAAATGCCGCTA+CGG 0.576405 tig0019933:-29636 None:intergenic
TATGTCATATTCAACATCCA+TGG 0.576603 tig0019933:+30135 Msa1377480:CDS
ATCAAGAATTGTCAGTGGCA+AGG 0.591117 tig0019933:+30227 Msa1377480:CDS
AAATGTTGAGGGTACTACTA+GGG 0.593051 tig0019933:+34214 Msa1377480:CDS
CCAAATCGTTAATTTAGTGG+AGG 0.593465 tig0019933:+33437 Msa1377480:CDS
CTTCTCGGCACGCTGTCAAG+GGG 0.600480 tig0019933:-28046 Msa1377470:CDS
ACGGCATTTCGCGGCCGTAG+CGG 0.601240 tig0019933:+29622 Msa1377480:five_prime_UTR
TCAATCAATTATACAGATGG+AGG 0.603131 tig0019933:-34722 None:intergenic
TGGTCCGTCCACCTAGATGT+GGG 0.609722 tig0019933:-28331 Msa1377470:intron
GATTGCAGAATTGGACGACA+AGG 0.630136 tig0019933:+34361 Msa1377480:CDS
AACATTGCAGTACCAGCAGA+TGG 0.630662 tig0019933:+29996 Msa1377480:CDS
AAAATGTCAACAAGGACTAG+AGG 0.632875 tig0019933:+30180 Msa1377480:CDS
ATGGACAAGACCATCTGATG+AGG 0.649657 tig0019933:+34336 Msa1377480:CDS
AAATGGGGAAAATGTCAACA+AGG 0.658904 tig0019933:+30172 Msa1377480:CDS
ATCTCATTCAGGAAAGAGAG+AGG 0.662981 tig0019933:+33608 Msa1377480:intron
GAAAGATCAAGAATTGTCAG+TGG 0.665778 tig0019933:+30222 Msa1377480:CDS
AGTTCCAGTACTTTGCTGGG+TGG 0.670721 tig0019933:-29853 None:intergenic
CATTCCTGAGATGACAGTCA+GGG 0.685265 tig0019933:-28082 Msa1377470:CDS
AAACGCAGAGAAAGATCAGG+AGG 0.687062 tig0019933:+29892 Msa1377480:CDS
ATCGAACCTGAAAACTAGAG+AGG 0.689094 tig0019933:+34119 Msa1377480:CDS
TCATCATGTAAAATCTAGTG+TGG 0.690493 tig0019933:+34796 Msa1377480:three_prime_UTR
GCACCAACATCAGAGAAATG+GGG 0.704217 tig0019933:+30157 Msa1377480:CDS
GTAACGTCAGAATTACCAAG+AGG 0.738414 tig0019933:+34557 Msa1377480:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATCTTAAAAAATTAG+AGG - tig0019933:29930-29949 None:intergenic 10.0%
!! AATTTCACAATATAAAAATA+AGG - tig0019933:33331-33350 None:intergenic 10.0%
!!! ATGAGTTTTTTATTTTTAAA+TGG + tig0019933:33825-33844 Msa1377480:intron 10.0%
!!! TTTTATTTTTAATTCTTATG+TGG - tig0019933:34269-34288 None:intergenic 10.0%
!!! TTTACTTTATCATTTTAAAA+TGG + tig0019933:34473-34492 Msa1377480:intron 10.0%
!! CTTTAAACATGTTATAATTA+TGG - tig0019933:28636-28655 Msa1377470:intron 15.0%
!!! GAAATTTTAGAGAAAAAATT+GGG - tig0019933:29020-29039 None:intergenic 15.0%
!!! TGAAATTTTAGAGAAAAAAT+TGG - tig0019933:29021-29040 None:intergenic 15.0%
!!! AATTAACAATTACTTTTAGA+TGG - tig0019933:29190-29209 None:intergenic 15.0%
!! AATCAATTACAATAACAATT+GGG - tig0019933:29781-29800 None:intergenic 15.0%
!! AAATCAATTACAATAACAAT+TGG - tig0019933:29782-29801 None:intergenic 15.0%
!! AAATTTACTTGTAGTTAAAT+AGG - tig0019933:30563-30582 None:intergenic 15.0%
!! AGTAATTATTAAACACATAA+TGG + tig0019933:31910-31929 Msa1377480:intron 15.0%
!! CTAAATGTCTAAATTTATAT+TGG + tig0019933:31934-31953 Msa1377480:intron 15.0%
!!! TAAGTTTCAGATTTATTTTT+AGG + tig0019933:32075-32094 Msa1377480:intron 15.0%
!!! TTTTGCCATTTTTTTTAATA+GGG - tig0019933:33255-33274 None:intergenic 15.0%
!! AAATAAAAAAAAGGAAAGAA+AGG + tig0019933:32305-32324 Msa1377480:intron 15.0%
!! AAATCACAAAAAAAAAAACA+TGG - tig0019933:33095-33114 None:intergenic 15.0%
!! GAAAATTAAAATAAATACAC+AGG + tig0019933:33162-33181 Msa1377480:intron 15.0%
!!! TTTTGCCATTTTTTTTAATA+GGG + tig0019933:33255-33274 Msa1377480:intron 15.0%
!!! TTTTATATTGTGAAATTTCA+TGG + tig0019933:33334-33353 Msa1377480:intron 15.0%
!! AATATGTTAAAATGTATAGT+TGG - tig0019933:33931-33950 None:intergenic 15.0%
!! AAAATAAATCAATCTGTTTA+TGG + tig0019933:34286-34305 Msa1377480:intron 15.0%
!!! ATTTTATTTTGTGGATTATA+GGG + tig0019933:34519-34538 Msa1377480:intron 15.0%
!! ACATTTACATTAAAAAAAGT+TGG - tig0019933:34694-34713 None:intergenic 15.0%
!! AAACCTAAAGATAAGTAAAA+AGG + tig0019933:28130-28149 Msa1377480:intron 20.0%
!!! TCATCTTTTATTTAAGTTCA+CGG - tig0019933:29108-29127 None:intergenic 20.0%
!! TGAAAACTATTCAATAAAAC+CGG - tig0019933:30040-30059 None:intergenic 20.0%
!!! GTATTTAACCTTTTTATTAG+AGG + tig0019933:30298-30317 Msa1377480:intron 20.0%
!! CTAACCAAAATACATATATA+CGG - tig0019933:31106-31125 None:intergenic 20.0%
!!! TTTGCCATTTTTTTTAATAG+GGG - tig0019933:33256-33275 None:intergenic 20.0%
!!! CTTTTGCCATTTTTTTTAAT+AGG - tig0019933:33254-33273 None:intergenic 20.0%
!! TATTAATTCAAAAAATACCC+AGG - tig0019933:32243-32262 None:intergenic 20.0%
!!! ATGATTTTCTTGTTAAGAAA+TGG - tig0019933:32359-32378 None:intergenic 20.0%
!!! ATTTTTTTTGTTTGTTTTGC+TGG - tig0019933:32462-32481 None:intergenic 20.0%
!! TTATTAGCTAATTATACACA+TGG + tig0019933:33125-33144 Msa1377480:intron 20.0%
!! AATTAAAATAAATACACAGG+TGG + tig0019933:33165-33184 Msa1377480:intron 20.0%
!!! CTTTTGCCATTTTTTTTAAT+AGG + tig0019933:33254-33273 Msa1377480:intron 20.0%
!!! TTTGCCATTTTTTTTAATAG+GGG + tig0019933:33256-33275 Msa1377480:intron 20.0%
!! TAAAATGTATAGTTGGAATT+CGG - tig0019933:33924-33943 None:intergenic 20.0%
!!! TAAGTTACATTCCAAATTTT+CGG + tig0019933:33968-33987 Msa1377480:intron 20.0%
!!! TTACATTTTCTATCTTTAGT+AGG + tig0019933:34449-34468 Msa1377480:intron 20.0%
!!! TACATTTTCTATCTTTAGTA+GGG + tig0019933:34450-34469 Msa1377480:intron 20.0%
!!! CATTTTATTTTGTGGATTAT+AGG + tig0019933:34518-34537 Msa1377480:intron 20.0%
!!! TTTTATTTTGTGGATTATAG+GGG + tig0019933:34520-34539 Msa1377480:intron 20.0%
!! TTTACTTATCTTTAGGTTTC+TGG - tig0019933:28129-28148 Msa1377470:intron 25.0%
!! CTACCTTTTTACTTATCTTT+AGG - tig0019933:28136-28155 Msa1377470:intron 25.0%
! CTAAAGATAAGTAAAAAGGT+AGG + tig0019933:28134-28153 Msa1377480:intron 25.0%
! CTCAAAAATCAATCAAGATT+AGG - tig0019933:28232-28251 Msa1377470:intron 25.0%
!!! AGAAAATAGTTTTGGCATTA+AGG - tig0019933:28407-28426 Msa1377470:intron 25.0%
!! CCATACATAGAAAATAGTTT+TGG - tig0019933:28415-28434 Msa1377470:intron 25.0%
!! CCAAAACTATTTTCTATGTA+TGG + tig0019933:28412-28431 Msa1377480:intron 25.0%
! AGATTGTTTGATTATGTCTT+TGG - tig0019933:28932-28951 None:intergenic 25.0%
! ACTTTGATTGTATATGTTGT+TGG - tig0019933:28976-28995 None:intergenic 25.0%
! ACCTAAATACTCAAATTAAG+TGG + tig0019933:29054-29073 Msa1377480:intron 25.0%
!! ACCACTTAATTTGAGTATTT+AGG - tig0019933:29058-29077 None:intergenic 25.0%
! AATTACTTACTTCTCTTCTT+TGG - tig0019933:29450-29469 None:intergenic 25.0%
! GAAAATTCAGTAATTTGAAC+AGG - tig0019933:29593-29612 None:intergenic 25.0%
! GTAATCAAGGTTTCAAAAAA+CGG - tig0019933:29752-29771 None:intergenic 25.0%
!! TTCATTTCACGGAATATTTT+TGG - tig0019933:30109-30128 None:intergenic 25.0%
!! ACATATCTGTTTTCATTTCA+CGG - tig0019933:30120-30139 None:intergenic 25.0%
!! TTTAACCTTTTTATTAGAGG+TGG + tig0019933:30301-30320 Msa1377480:intron 25.0%
!! TTAACCTTTTTATTAGAGGT+GGG + tig0019933:30302-30321 Msa1377480:intron 25.0%
! TACATGCCTACTTTATATTA+AGG + tig0019933:30475-30494 Msa1377480:intron 25.0%
! TGATGACCTTAATATAAAGT+AGG - tig0019933:30484-30503 None:intergenic 25.0%
!!! AGTTAAATAGGCTTTTAAGT+AGG - tig0019933:30551-30570 None:intergenic 25.0%
!!! TTAATAGGCTTTGTTGTTAT+AGG - tig0019933:30612-30631 None:intergenic 25.0%
! TATAACAACAAAGCCTATTA+AGG + tig0019933:30611-30630 Msa1377480:intron 25.0%
! ATAACAACAAAGCCTATTAA+GGG + tig0019933:30612-30631 Msa1377480:intron 25.0%
! AAAAGCCTGTTTAGTTAAAT+AGG - tig0019933:30775-30794 None:intergenic 25.0%
! GATAGAGACTATAAAAAGTA+GGG - tig0019933:30901-30920 None:intergenic 25.0%
!!! CGTATATATGTATTTTGGTT+AGG + tig0019933:31104-31123 Msa1377480:intron 25.0%
!!! AGGGTTTTGTTTTAATTGTT+GGG - tig0019933:31147-31166 None:intergenic 25.0%
!!! TAGGGTTTTGTTTTAATTGT+TGG - tig0019933:31148-31167 None:intergenic 25.0%
! AAAAAAACATTATGTCTGTG+TGG - tig0019933:31342-31361 None:intergenic 25.0%
! GAAGTGATACATATAGATAT+GGG - tig0019933:31450-31469 None:intergenic 25.0%
! AGAAGTGATACATATAGATA+TGG - tig0019933:31451-31470 None:intergenic 25.0%
! AGATATATTGTTGAAGAAGA+AGG - tig0019933:31475-31494 None:intergenic 25.0%
!!! TTTTTCATTTGCTTTGTTTC+TGG + tig0019933:31515-31534 Msa1377480:intron 25.0%
!! AAAATTGACGTTTTGCAAAA+GGG - tig0019933:33213-33232 None:intergenic 25.0%
! AAATTCTGTAAATACACATG+TGG - tig0019933:32279-32298 None:intergenic 25.0%
!!! GCATTTTCTTTAAGAAATGA+AGG - tig0019933:32410-32429 None:intergenic 25.0%
! ATAAGAGAAAGAGAATATAC+AGG + tig0019933:32620-32639 Msa1377480:intron 25.0%
! TAAAAGTAGAAGATGATGAA+AGG + tig0019933:32990-33009 Msa1377480:intron 25.0%
!!! TTGCCATTTTTTTTAATAGG+GGG + tig0019933:33257-33276 Msa1377480:intron 25.0%
!!! CTAAATTAACGATTTGGTTT+TGG - tig0019933:33434-33453 None:intergenic 25.0%
! AAACCAAATCGTTAATTTAG+TGG + tig0019933:33434-33453 Msa1377480:CDS 25.0%
!! AATTGCCATTTCTTTATCAT+TGG + tig0019933:33548-33567 Msa1377480:intron 25.0%
!! ATTGCCATTTCTTTATCATT+GGG + tig0019933:33549-33568 Msa1377480:intron 25.0%
!! TTTTCCCAATGATAAAGAAA+TGG - tig0019933:33556-33575 None:intergenic 25.0%
! GATCATTAATATGTTGTCTA+AGG - tig0019933:33591-33610 None:intergenic 25.0%
! ACATATTAATGATCTCATTC+AGG + tig0019933:33597-33616 Msa1377480:intron 25.0%
!! GATTCAAGTTCATATTAAAC+TGG + tig0019933:33748-33767 Msa1377480:intron 25.0%
! CATTCTTTACGGTAAAAAAA+AGG - tig0019933:33800-33819 None:intergenic 25.0%
!!! CTTTTTTTTACCGTAAAGAA+TGG + tig0019933:33798-33817 Msa1377480:intron 25.0%
! ACATTAAAGAACCGAAAATT+TGG - tig0019933:33982-34001 None:intergenic 25.0%
! TTCTAAATCTTGAAATAGCA+TGG - tig0019933:34025-34044 None:intergenic 25.0%
! ACAAGGTTAAAACACTAATT+GGG + tig0019933:34378-34397 Msa1377480:exon 25.0%
! TGATCAATCAATTATACAGA+TGG - tig0019933:34728-34747 None:intergenic 25.0%
!! TACATTTTTGAACTTGCAAA+AGG - tig0019933:34759-34778 None:intergenic 25.0%
!! TGATACATTTTGTCTATTCA+TGG + tig0019933:34871-34890 Msa1377480:three_prime_UTR 25.0%
TTGAATTGCTAAATGAATGC+AGG - tig0019933:28371-28390 Msa1377470:intron 30.0%
! GCGACTGTTATTTATAATCT+TGG - tig0019933:28466-28485 Msa1377470:intron 30.0%
AGTGGAAATAACAATGATGA+AGG - tig0019933:28905-28924 Msa1377470:CDS 30.0%
TTGTTTGATTATGTCTTTGG+AGG - tig0019933:28929-28948 None:intergenic 30.0%
AAAATTGGGACTTTGATGTT+AGG - tig0019933:29006-29025 None:intergenic 30.0%
!! CTGGTATTTTTGTTATCACT+TGG - tig0019933:29278-29297 None:intergenic 30.0%
! ATCTTTTGTACAGAAAAGTC+AGG - tig0019933:29495-29514 None:intergenic 30.0%
AGTAATTTGAACAGGAGAAA+AGG - tig0019933:29585-29604 None:intergenic 30.0%
!!! CTGAATTTTCAAGTCTGAAA+CGG + tig0019933:29603-29622 Msa1377480:five_prime_UTR 30.0%
! TTTTTGTTCTCAACGTGAAA+AGG + tig0019933:29678-29697 Msa1377480:five_prime_UTR 30.0%
AATAAAACCGGAACTTGTAT+TGG - tig0019933:30028-30047 None:intergenic 30.0%
TATGTCATATTCAACATCCA+TGG + tig0019933:30135-30154 Msa1377480:CDS 30.0%
TATTCCCACCTCTAATAAAA+AGG - tig0019933:30309-30328 None:intergenic 30.0%
! TTTTTATTAGAGGTGGGAAT+AGG + tig0019933:30308-30327 Msa1377480:intron 30.0%
TATAAAGTAGGCATGTAAGT+AGG - tig0019933:30472-30491 None:intergenic 30.0%
! GCTTGTTTAGCTTATTTAGT+AGG - tig0019933:30521-30540 None:intergenic 30.0%
!! GTTGTTATAGGCTTTTAAGT+AGG - tig0019933:30600-30619 None:intergenic 30.0%
CTATCTATTAGTCCCTTAAT+AGG - tig0019933:30627-30646 None:intergenic 30.0%
!! TTTTTAAAAAGCCTAAGCCT+AGG + tig0019933:30791-30810 Msa1377480:intron 30.0%
AGACTATAAAAAGTAGGGTT+GGG - tig0019933:30896-30915 None:intergenic 30.0%
GGATAGAGACTATAAAAAGT+AGG - tig0019933:30902-30921 None:intergenic 30.0%
CCAAAATACATATATACGGT+CGG - tig0019933:31102-31121 None:intergenic 30.0%
!!! TTTTGTTTTAATTGTTGGGC+TGG - tig0019933:31143-31162 None:intergenic 30.0%
AAGGAAATGGAATAGAAGTA+GGG - tig0019933:31166-31185 None:intergenic 30.0%
AGATCATCAAACACTAACAA+TGG - tig0019933:31408-31427 None:intergenic 30.0%
GGATATTAAGTTCTACACAT+GGG - tig0019933:31795-31814 None:intergenic 30.0%
AGGATATTAAGTTCTACACA+TGG - tig0019933:31796-31815 None:intergenic 30.0%
TGTGTAGAACTTAATATCCT+AGG + tig0019933:31796-31815 Msa1377480:intron 30.0%
TTGCAACTTATGCAAAGTTA+GGG - tig0019933:33286-33305 None:intergenic 30.0%
ATTGCAACTTATGCAAAGTT+AGG - tig0019933:33285-33304 None:intergenic 30.0%
! CTTTGCATAAGTTGCAATTT+TGG + tig0019933:32123-32142 Msa1377480:intron 30.0%
TGGTCCCCTATTAAAAAAAA+TGG + tig0019933:32143-32162 Msa1377480:intron 30.0%
! AAATTGACGTTTTGCAAAAG+GGG - tig0019933:33214-33233 None:intergenic 30.0%
! CAAAATTGACGTTTTGCAAA+AGG - tig0019933:33212-33231 None:intergenic 30.0%
TAATTCAAAAAATACCCAGG+TGG - tig0019933:32240-32259 None:intergenic 30.0%
AAAAAAAGGAAAGAAAGGAG+AGG + tig0019933:32310-32329 Msa1377480:intron 30.0%
TAAGAAATGGATGAAGAAGA+AGG - tig0019933:32346-32365 None:intergenic 30.0%
!!! TTGTTTGTTTTGCTGGATTT+GGG - tig0019933:32455-32474 None:intergenic 30.0%
!!! TTTGTTTGTTTTGCTGGATT+TGG - tig0019933:32456-32475 None:intergenic 30.0%
!! AGTCTAAACATTGATAATGC+AGG - tig0019933:32542-32561 None:intergenic 30.0%
ATACCCTGCATTATCAATTA+TGG + tig0019933:32566-32585 Msa1377480:intron 30.0%
TACCCTGCATTATCAATTAT+GGG + tig0019933:32567-32586 Msa1377480:intron 30.0%
ATGTTTAAGGAACATGACTT+GGG - tig0019933:32769-32788 None:intergenic 30.0%
!! AGGAGTAAAGTTGATGTTTA+AGG - tig0019933:32782-32801 None:intergenic 30.0%
! AAATTGACGTTTTGCAAAAG+AGG + tig0019933:33214-33233 Msa1377480:intron 30.0%
! AATTGACGTTTTGCAAAAGA+GGG + tig0019933:33215-33234 Msa1377480:intron 30.0%
! CTTTGCATAAGTTGCAATTT+TGG - tig0019933:32123-32142 None:intergenic 30.0%
ATTGCAACTTATGCAAAGTT+AGG + tig0019933:33285-33304 Msa1377480:intron 30.0%
TTGCAACTTATGCAAAGTTA+GGG + tig0019933:33286-33305 Msa1377480:intron 30.0%
GCTGAGTCACAAATTAAATA+CGG - tig0019933:34094-34113 None:intergenic 30.0%
GACAAGGTTAAAACACTAAT+TGG + tig0019933:34377-34396 Msa1377480:exon 30.0%
! CCTTAATCTTTGATGATTGT+GGG - tig0019933:34424-34443 None:intergenic 30.0%
! ACCTTAATCTTTGATGATTG+TGG - tig0019933:34425-34444 None:intergenic 30.0%
!!! GTTACGAGCATTTTATTTTG+TGG + tig0019933:34510-34529 Msa1377480:intron 30.0%
!!! CTAAACAACCACTTTTTTTG+CGG + tig0019933:34663-34682 Msa1377480:three_prime_UTR 30.0%
TCAATCAATTATACAGATGG+AGG - tig0019933:34725-34744 None:intergenic 30.0%
TCATCATGTAAAATCTAGTG+TGG + tig0019933:34796-34815 Msa1377480:three_prime_UTR 30.0%
!! TGTTTTTGCCTTTCATTCAT+TGG + tig0019933:34819-34838 Msa1377480:three_prime_UTR 30.0%
!! GGTTGTAATTTTGATCTCAT+TGG + tig0019933:34845-34864 Msa1377480:three_prime_UTR 30.0%
TCTATTCATGGTACTTATAG+TGG + tig0019933:34883-34902 Msa1377480:three_prime_UTR 30.0%
GGAAACAATTGACATCTTCT+CGG - tig0019933:28064-28083 Msa1377470:CDS 35.0%
AGTAAAAAGGTAGGCTAAGT+AGG + tig0019933:28143-28162 Msa1377480:intron 35.0%
CGGAGATTGTTTGTAGTATA+CGG + tig0019933:28172-28191 Msa1377480:intron 35.0%
AGATTAGGCCTATTAATGCA+AGG - tig0019933:28217-28236 Msa1377470:intron 35.0%
AACTAAAATACTGACCTCCA+GGG + tig0019933:28273-28292 Msa1377480:intron 35.0%
AACTACCTTACTAATGGCAT+TGG - tig0019933:28309-28328 Msa1377470:intron 35.0%
TGGGAAAACTACCTTACTAA+TGG - tig0019933:28315-28334 Msa1377470:intron 35.0%
AACGAACAAGAAGCAAGAAA+CGG + tig0019933:29331-29350 Msa1377480:five_prime_UTR 35.0%
TGTGTGATTCTTTGTGATTC+TGG - tig0019933:29362-29381 None:intergenic 35.0%
TACTTACTTCTCTTCTTTGG+TGG - tig0019933:29447-29466 None:intergenic 35.0%
AATACAAGAACAGGAGAAGA+AGG - tig0019933:29530-29549 None:intergenic 35.0%
AAGCACAAGAATACAAGAAC+AGG - tig0019933:29539-29558 None:intergenic 35.0%
AACGTGAAAAGGTCCAAAAA+CGG + tig0019933:29689-29708 Msa1377480:five_prime_UTR 35.0%
CAAGGTTTCAAAAAACGGAT+CGG - tig0019933:29747-29766 None:intergenic 35.0%
! TTTGAAACCTTGATTACAGC+AGG + tig0019933:29755-29774 Msa1377480:five_prime_UTR 35.0%
AAATGGGGAAAATGTCAACA+AGG + tig0019933:30172-30191 Msa1377480:CDS 35.0%
AAAATGTCAACAAGGACTAG+AGG + tig0019933:30180-30199 Msa1377480:CDS 35.0%
GAAAGATCAAGAATTGTCAG+TGG + tig0019933:30222-30241 Msa1377480:CDS 35.0%
!!! TGTAAATTTTTTCGTAGGCC+AGG - tig0019933:30365-30384 None:intergenic 35.0%
TGGCCTACGAAAAAATTTAC+AGG + tig0019933:30364-30383 Msa1377480:intron 35.0%
!!! AGGCCTGTAAATTTTTTCGT+AGG - tig0019933:30370-30389 None:intergenic 35.0%
!! AGGCTTTTAAGTAGGCTTTA+AGG - tig0019933:30543-30562 None:intergenic 35.0%
TATTAATAGGCCAGCCTATT+AGG + tig0019933:30717-30736 Msa1377480:intron 35.0%
AAAAGCCTGTTAAGCCTAAT+AGG - tig0019933:30734-30753 None:intergenic 35.0%
TAAAAAGTAGGGTTGGGAAT+AGG - tig0019933:30890-30909 None:intergenic 35.0%
GAGACTATAAAAAGTAGGGT+TGG - tig0019933:30897-30916 None:intergenic 35.0%
TTATAGTCTCTATCCCATGT+AGG + tig0019933:30907-30926 Msa1377480:intron 35.0%
TATAGTCTCTATCCCATGTA+GGG + tig0019933:30908-30927 Msa1377480:intron 35.0%
!!! TTTTTTGTCCAACCCTACAT+GGG - tig0019933:30923-30942 None:intergenic 35.0%
TTGGACAAAAAACACCAAAC+CGG + tig0019933:30931-30950 Msa1377480:intron 35.0%
TACATATATACGGTCGGATT+CGG - tig0019933:31096-31115 None:intergenic 35.0%
! CCGACCGTATATATGTATTT+TGG + tig0019933:31099-31118 Msa1377480:intron 35.0%
GAAGGAAATGGAATAGAAGT+AGG - tig0019933:31167-31186 None:intergenic 35.0%
!! GTTGAGATTGAAAGCATCAA+TGG - tig0019933:31258-31277 None:intergenic 35.0%
AAGAAGGGACTATTAAACTG+TGG - tig0019933:31283-31302 None:intergenic 35.0%
CATCAAACACTAACAATGGT+TGG - tig0019933:31404-31423 None:intergenic 35.0%
TTTCGGTTTAACGGTTATCA+CGG - tig0019933:31651-31670 None:intergenic 35.0%
! TCTGAAACTTACTGCATAGT+TGG - tig0019933:32066-32085 None:intergenic 35.0%
TGCAACTTATGCAAAGTTAG+GGG - tig0019933:33287-33306 None:intergenic 35.0%
!!! GCAAAACGTCAATTTTGACT+TGG + tig0019933:32196-32215 Msa1377480:intron 35.0%
!!! TGTTTGTTTTGCTGGATTTG+GGG - tig0019933:32454-32473 None:intergenic 35.0%
! AGGAGTGATTTTATTGTTGC+TGG - tig0019933:32512-32531 None:intergenic 35.0%
!! TTGATAATGCAGGTGAAACA+AGG - tig0019933:32532-32551 None:intergenic 35.0%
GATGTTTAAGGAACATGACT+TGG - tig0019933:32770-32789 None:intergenic 35.0%
CAATAAAGTCCCAGAATCAT+CGG - tig0019933:32851-32870 None:intergenic 35.0%
! AGGAAGATGAAGATTTGGTT+TGG + tig0019933:33038-33057 Msa1377480:intron 35.0%
!! AGATGAAGATTTGGTTTGGA+AGG + tig0019933:33042-33061 Msa1377480:intron 35.0%
!!! GCAAAACGTCAATTTTGACT+TGG - tig0019933:32196-32215 None:intergenic 35.0%
TGGCCCCCTATTAAAAAAAA+TGG - tig0019933:33263-33282 None:intergenic 35.0%
TGCAACTTATGCAAAGTTAG+GGG + tig0019933:33287-33306 Msa1377480:intron 35.0%
TAGACCAGAACCAAATCTTA+TGG + tig0019933:33407-33426 Msa1377480:CDS 35.0%
!!! TGGTTTTGGTCCATAAGATT+TGG - tig0019933:33420-33439 None:intergenic 35.0%
CCTCCACTAAATTAACGATT+TGG - tig0019933:33440-33459 None:intergenic 35.0%
CCAAATCGTTAATTTAGTGG+AGG + tig0019933:33437-33456 Msa1377480:CDS 35.0%
GCATAATCAAGCATGGATAA+TGG - tig0019933:33665-33684 None:intergenic 35.0%
AGAACTTGCATAATCAAGCA+TGG - tig0019933:33672-33691 None:intergenic 35.0%
ACATATTTAAACTCCTCCCA+TGG + tig0019933:33695-33714 Msa1377480:intron 35.0%
ACTCATAACGCCATTCTTTA+CGG - tig0019933:33811-33830 None:intergenic 35.0%
TGCGCAAAATGAAATGTTGA+GGG + tig0019933:34203-34222 Msa1377480:CDS 35.0%
!! AAATGTTGAGGGTACTACTA+GGG + tig0019933:34214-34233 Msa1377480:CDS 35.0%
CCCACAATCATCAAAGATTA+AGG + tig0019933:34421-34440 Msa1377480:three_prime_UTR 35.0%
TAAAATGCTCGTAACTGAGA+AGG - tig0019933:34505-34524 None:intergenic 35.0%
TTATAGGGGAGCTCAAAATT+TGG + tig0019933:34534-34553 Msa1377480:intron 35.0%
TATAGGGGAGCTCAAAATTT+GGG + tig0019933:34535-34554 Msa1377480:intron 35.0%
AACTATCACCAGAAGATTTG+CGG - tig0019933:34636-34655 None:intergenic 35.0%
! TTTTGCCTTTCATTCATTGG+TGG + tig0019933:34822-34841 Msa1377480:three_prime_UTR 35.0%
TTTGCCTTTCATTCATTGGT+GGG + tig0019933:34823-34842 Msa1377480:three_prime_UTR 35.0%
TCTGGAGAAATCTGCTACAA+TGG - tig0019933:28111-28130 Msa1377470:CDS 40.0%
GTAGGCTAAGTAGGATATCA+CGG + tig0019933:28152-28171 Msa1377480:intron 40.0%
GCTCAATGCCTTGCATTAAT+AGG + tig0019933:28206-28225 Msa1377480:intron 40.0%
GAACTAAAATACTGACCTCC+AGG + tig0019933:28272-28291 Msa1377480:intron 40.0%
! AAGGTAGTTTTCCCACATCT+AGG + tig0019933:28320-28339 Msa1377480:five_prime_UTR 40.0%
ATAAATAACAGTCGCGATCG+CGG + tig0019933:28471-28490 Msa1377480:intron 40.0%
GATACAAATAACGGTCTTCG+CGG + tig0019933:28536-28555 Msa1377480:intron 40.0%
TATTACCATGTGGTGACTAG+TGG - tig0019933:28852-28871 Msa1377470:intron 40.0%
AACAATGATGAAGGTGACAG+TGG - tig0019933:28896-28915 Msa1377470:intron 40.0%
! GATTATGTCTTTGGAGGAAG+TGG - tig0019933:28923-28942 None:intergenic 40.0%
! TTTGTTCAGGTTTGCGATTC+TGG - tig0019933:29297-29316 None:intergenic 40.0%
CGCAAACCTGAACAAAGAAA+CGG + tig0019933:29301-29320 Msa1377480:intron 40.0%
TTACTTCTCTTCTTTGGTGG+TGG - tig0019933:29444-29463 None:intergenic 40.0%
AAAAGGTCCAAAAACGGTCA+CGG + tig0019933:29695-29714 Msa1377480:five_prime_UTR 40.0%
TTCAAAAAACGGATCGGTAC+CGG - tig0019933:29741-29760 None:intergenic 40.0%
CGCATAAAAACCCCTAATGT+AGG + tig0019933:29827-29846 Msa1377480:five_prime_UTR 40.0%
TGAAGTTCCAGTACTTTGCT+GGG - tig0019933:29859-29878 None:intergenic 40.0%
ATGAAGTTCCAGTACTTTGC+TGG - tig0019933:29860-29879 None:intergenic 40.0%
TGAAAACGCAGAGAAAGATC+AGG + tig0019933:29889-29908 Msa1377480:CDS 40.0%
GTACGTACCAATACAAGTTC+CGG + tig0019933:30018-30037 Msa1377480:CDS 40.0%
TTTCCCCATTTCTCTGATGT+TGG - tig0019933:30163-30182 None:intergenic 40.0%
ATCAAGAATTGTCAGTGGCA+AGG + tig0019933:30227-30246 Msa1377480:CDS 40.0%
! GGTTAAATACCTCCTTTTGC+CGG - tig0019933:30288-30307 None:intergenic 40.0%
!!! CTATCATAGGCCGTTTTTCT+GGG + tig0019933:30406-30425 Msa1377480:intron 40.0%
! TTAGGCTTAACAGGCTTTTC+TGG + tig0019933:30735-30754 Msa1377480:intron 40.0%
TAGTTAAATAGGCCAGGCTT+AGG - tig0019933:30764-30783 None:intergenic 40.0%
CCTGTTTAGTTAAATAGGCC+AGG - tig0019933:30770-30789 None:intergenic 40.0%
CCTGGCCTATTTAACTAAAC+AGG + tig0019933:30767-30786 Msa1377480:intron 40.0%
!!! GTTTTTTGTCCAACCCTACA+TGG - tig0019933:30924-30943 None:intergenic 40.0%
! TTCGGGTTACACAGTCAATT+CGG + tig0019933:30992-31011 Msa1377480:intron 40.0%
! TCAAAGGTCATGGTTTGTGT+TGG + tig0019933:31025-31044 Msa1377480:intron 40.0%
!! TTGAAAGCATCAATGGAGGT+TGG - tig0019933:31251-31270 None:intergenic 40.0%
!! GAGATTGAAAGCATCAATGG+AGG - tig0019933:31255-31274 None:intergenic 40.0%
GAAGAAGGTTTGTGGAAGAT+GGG - tig0019933:31318-31337 None:intergenic 40.0%
AGAAGAAGGTTTGTGGAAGA+TGG - tig0019933:31319-31338 None:intergenic 40.0%
TTATGTCTGTGTGGAGAAGA+AGG - tig0019933:31333-31352 None:intergenic 40.0%
CTGGACTTTGTGAAAGATTC+TGG + tig0019933:31534-31553 Msa1377480:intron 40.0%
! ACGGTTCGATATTATCGGTT+TGG - tig0019933:31624-31643 None:intergenic 40.0%
TTCGGTTTAACGGTTATCAC+GGG - tig0019933:31650-31669 None:intergenic 40.0%
!! GTTGAGTCGGTTTTCGATTT+TGG + tig0019933:31728-31747 Msa1377480:intron 40.0%
GAACTTAATATCCTAGGTGC+AGG + tig0019933:31802-31821 Msa1377480:intron 40.0%
CAGGCTCGGGTTAAAATTTA+AGG + tig0019933:31821-31840 Msa1377480:intron 40.0%
ATCTGACACCAAGAACAAGA+AGG - tig0019933:32034-32053 None:intergenic 40.0%
!! TCTTGTTCTTGGTGTCAGAT+TGG + tig0019933:32034-32053 Msa1377480:intron 40.0%
GCAACTTATGCAAAGTTAGG+GGG - tig0019933:33288-33307 None:intergenic 40.0%
TTGCAAAAGGGGATAGACAT+GGG - tig0019933:32180-32199 None:intergenic 40.0%
TTTGCAAAAGGGGATAGACA+TGG - tig0019933:32181-32200 None:intergenic 40.0%
!! CGCCCATAATTGATAATGCA+GGG - tig0019933:32572-32591 None:intergenic 40.0%
!! TCGCCCATAATTGATAATGC+AGG - tig0019933:32573-32592 None:intergenic 40.0%
! TGAGGGTGTGAAATGAAAAG+GGG - tig0019933:32746-32765 None:intergenic 40.0%
! GTGAGGGTGTGAAATGAAAA+GGG - tig0019933:32747-32766 None:intergenic 40.0%
! TTGGAAGCGTGATACAAAGA+AGG - tig0019933:32802-32821 None:intergenic 40.0%
!! AGAATCATCGGTGTCGTTTA+AGG - tig0019933:32839-32858 None:intergenic 40.0%
TTAAACGACACCGATGATTC+TGG + tig0019933:32838-32857 Msa1377480:intron 40.0%
TAAACGACACCGATGATTCT+GGG + tig0019933:32839-32858 Msa1377480:intron 40.0%
!! CGATGATTCTGGGACTTTAT+TGG + tig0019933:32849-32868 Msa1377480:intron 40.0%
AGTTGAAGATTCAGACTCGT+TGG + tig0019933:32888-32907 Msa1377480:intron 40.0%
! GGTCGGAAATTTTCAATTGC+TGG + tig0019933:32963-32982 Msa1377480:intron 40.0%
GAAAGGAGAAGATGCAGATT+TGG + tig0019933:33007-33026 Msa1377480:intron 40.0%
! GAGAAGATGCAGATTTGGTT+TGG + tig0019933:33012-33031 Msa1377480:intron 40.0%
!! ATGCAGATTTGGTTTGGAAG+AGG + tig0019933:33018-33037 Msa1377480:intron 40.0%
GGAAGAGGAAGATGAAGATT+TGG + tig0019933:33033-33052 Msa1377480:intron 40.0%
!! ATTTGGTTTGGAAGGAGAAG+AGG + tig0019933:33050-33069 Msa1377480:intron 40.0%
TTTGCAAAAGAGGGTAGACA+TGG + tig0019933:33224-33243 Msa1377480:intron 40.0%
TTGCAAAAGAGGGTAGACAT+GGG + tig0019933:33225-33244 Msa1377480:intron 40.0%
GCAACTTATGCAAAGTTAGG+GGG + tig0019933:33288-33307 Msa1377480:intron 40.0%
CCAGAAGCAACAAAAATGCA+AGG - tig0019933:33370-33389 None:intergenic 40.0%
!! CCTTGCATTTTTGTTGCTTC+TGG + tig0019933:33367-33386 Msa1377480:intron 40.0%
! GGTTCTGGTCTATCAAATTC+TGG - tig0019933:33399-33418 None:intergenic 40.0%
! TGGTCCATAAGATTTGGTTC+TGG - tig0019933:33414-33433 None:intergenic 40.0%
GAGAGAAGAGTTCTTTGCAA+AGG + tig0019933:33473-33492 Msa1377480:CDS 40.0%
ATCTCATTCAGGAAAGAGAG+AGG + tig0019933:33608-33627 Msa1377480:intron 40.0%
AAGAGAGAGGTTAGTATGCT+TGG + tig0019933:33621-33640 Msa1377480:intron 40.0%
ATATGCGAACGTTACTCCAT+GGG - tig0019933:33714-33733 None:intergenic 40.0%
ATCTTGAAATAGCATGGACG+CGG - tig0019933:34019-34038 None:intergenic 40.0%
ATCGAACCTGAAAACTAGAG+AGG + tig0019933:34119-34138 Msa1377480:CDS 40.0%
!!! TATCTGCCTCTCTAGTTTTC+AGG - tig0019933:34128-34147 None:intergenic 40.0%
CTGCGCAAAATGAAATGTTG+AGG + tig0019933:34202-34221 Msa1377480:CDS 40.0%
!! GAAATGTTGAGGGTACTACT+AGG + tig0019933:34213-34232 Msa1377480:CDS 40.0%
!! TTCCTGTCACTTGTTGTAGA+TGG + tig0019933:34317-34336 Msa1377480:intron 40.0%
GATGAGGAAGATTGCAGAAT+TGG + tig0019933:34352-34371 Msa1377480:CDS 40.0%
GTAACGTCAGAATTACCAAG+AGG + tig0019933:34557-34576 Msa1377480:three_prime_UTR 40.0%
! TCTTCTGGTGATAGTTTGCA+CGG + tig0019933:34640-34659 Msa1377480:three_prime_UTR 40.0%
TTGCCTTTCATTCATTGGTG+GGG + tig0019933:34824-34843 Msa1377480:three_prime_UTR 40.0%
CATTCCTGAGATGACAGTCA+GGG - tig0019933:28085-28104 Msa1377470:CDS 45.0%
ACATTCCTGAGATGACAGTC+AGG - tig0019933:28086-28105 Msa1377470:CDS 45.0%
TCCAGCCAATGCCATTAGTA+AGG + tig0019933:28301-28320 Msa1377480:five_prime_UTR 45.0%
!! ACCTTACTAATGGCATTGGC+TGG - tig0019933:28305-28324 Msa1377470:intron 45.0%
! GTAGTTTTCCCACATCTAGG+TGG + tig0019933:28323-28342 Msa1377480:five_prime_UTR 45.0%
! TTTTCCCACATCTAGGTGGA+CGG + tig0019933:28327-28346 Msa1377480:five_prime_UTR 45.0%
TGCAGGCTTACTCTTCTTCT+TGG - tig0019933:28354-28373 Msa1377470:intron 45.0%
CGTTAAGGTTGTCGCGATTT+CGG + tig0019933:28497-28516 Msa1377480:intron 45.0%
GGACGCTGCGATACAAATAA+CGG + tig0019933:28527-28546 Msa1377480:intron 45.0%
TTACACCACTAGTCACCACA+TGG + tig0019933:28844-28863 Msa1377480:intron 45.0%
! TTGGTTAGTCACACGTATGC+AGG - tig0019933:29259-29278 None:intergenic 45.0%
! TGCTTGCCGTTTCTTTGTTC+AGG - tig0019933:29310-29329 None:intergenic 45.0%
! AAGTCTGAAACGGCATTTCG+CGG + tig0019933:29613-29632 Msa1377480:five_prime_UTR 45.0%
TCACAGCAAAATCGCCGTTA+CGG - tig0019933:29658-29677 None:intergenic 45.0%
TCAAAAAACGGATCGGTACC+GGG - tig0019933:29740-29759 None:intergenic 45.0%
AATTGGGCCTGCTGTAATCA+AGG - tig0019933:29765-29784 None:intergenic 45.0%
AAACGCAGAGAAAGATCAGG+AGG + tig0019933:29892-29911 Msa1377480:CDS 45.0%
CTGCTGGTACTGCAATGTTT+GGG - tig0019933:29995-30014 None:intergenic 45.0%
TCTGCTGGTACTGCAATGTT+TGG - tig0019933:29996-30015 None:intergenic 45.0%
AACATTGCAGTACCAGCAGA+TGG + tig0019933:29996-30015 Msa1377480:CDS 45.0%
TATTGGTACGTACCATCTGC+TGG - tig0019933:30011-30030 None:intergenic 45.0%
!! TTTCTCTGATGTTGGTGCCA+TGG - tig0019933:30155-30174 None:intergenic 45.0%
TGGCACCAACATCAGAGAAA+TGG + tig0019933:30155-30174 Msa1377480:CDS 45.0%
GGCACCAACATCAGAGAAAT+GGG + tig0019933:30156-30175 Msa1377480:CDS 45.0%
GCACCAACATCAGAGAAATG+GGG + tig0019933:30157-30176 Msa1377480:CDS 45.0%
!! GTGCTTCTAGTTCTTGCACA+CGG - tig0019933:30255-30274 None:intergenic 45.0%
AAAATTTACAGGCCTGAGCC+TGG + tig0019933:30375-30394 Msa1377480:intron 45.0%
CCAGAAAAACGGCCTATGAT+AGG - tig0019933:30408-30427 None:intergenic 45.0%
!!! CCTATCATAGGCCGTTTTTC+TGG + tig0019933:30405-30424 Msa1377480:intron 45.0%
! TCCAGGCTTTTAAATAGGCC+AGG - tig0019933:30437-30456 None:intergenic 45.0%
GCCTATTTAAAAGCCTGGAC+TGG + tig0019933:30438-30457 Msa1377480:intron 45.0%
! GCCAGTCCAGGCTTTTAAAT+AGG - tig0019933:30442-30461 None:intergenic 45.0%
AGGCATGTAAGTAGGCTTTC+AGG - tig0019933:30464-30483 None:intergenic 45.0%
TTGTAGATAGGCCTAGGCTT+AGG - tig0019933:30805-30824 None:intergenic 45.0%
! CCTGTTTTGTAGATAGGCCT+AGG - tig0019933:30811-30830 None:intergenic 45.0%
CCTAGGCCTATCTACAAAAC+AGG + tig0019933:30808-30827 Msa1377480:intron 45.0%
TCGGGTTACACAGTCAATTC+GGG + tig0019933:30993-31012 Msa1377480:intron 45.0%
! CACAGTCAATTCGGGTTAAG+CGG + tig0019933:31001-31020 Msa1377480:intron 45.0%
! ATTCGGGTTAAGCGGTTCAA+AGG + tig0019933:31009-31028 Msa1377480:intron 45.0%
GTTAAGCGGTTCAAAGGTCA+TGG + tig0019933:31015-31034 Msa1377480:intron 45.0%
!! GGTCATGGTTTGTGTTGGTT+TGG + tig0019933:31030-31049 Msa1377480:intron 45.0%
!! TGGTTTGTGTTGGTTTGGAC+TGG + tig0019933:31035-31054 Msa1377480:intron 45.0%
!! TTGTGTTGGTTTGGACTGGT+CGG + tig0019933:31039-31058 Msa1377480:intron 45.0%
TTGGCGTATGAGGAAGGAAA+TGG - tig0019933:31179-31198 None:intergenic 45.0%
! GAAGTGTTTGGTGAGAGAGA+AGG - tig0019933:31222-31241 None:intergenic 45.0%
!! GGTTGGTTGTTGGAAGTGTT+TGG - tig0019933:31234-31253 None:intergenic 45.0%
! CATCAATGGAGGTTGGTTGT+TGG - tig0019933:31244-31263 None:intergenic 45.0%
GGGAGAGTGAAGAGAAAGAA+GGG - tig0019933:31298-31317 None:intergenic 45.0%
TGGGAGAGTGAAGAGAAAGA+AGG - tig0019933:31299-31318 None:intergenic 45.0%
TGTGTGGAGAAGAAGGTTTG+TGG - tig0019933:31326-31345 None:intergenic 45.0%
GGCGAACGGTTCGATATTAT+CGG - tig0019933:31629-31648 None:intergenic 45.0%
TTTCGGCGGTTTCGGTTTAA+CGG - tig0019933:31660-31679 None:intergenic 45.0%
GCTTGAGATAATCCAACCGT+CGG + tig0019933:31706-31725 Msa1377480:intron 45.0%
TAATATCCTAGGTGCAGGCT+CGG + tig0019933:31807-31826 Msa1377480:intron 45.0%
CACTTTGCATGCTACAGACA+AGG + tig0019933:31967-31986 Msa1377480:intron 45.0%
ATTCGGGACCTTCTTGTTCT+TGG + tig0019933:32023-32042 Msa1377480:intron 45.0%
TGCAAAAGGGGATAGACATG+GGG - tig0019933:32179-32198 None:intergenic 45.0%
!! TTGACTTGGTCAAGCCTACA+TGG + tig0019933:32210-32229 Msa1377480:intron 45.0%
AAAGGGAGGAATGTGGTTGA+GGG - tig0019933:32711-32730 None:intergenic 45.0%
AAAAGGGAGGAATGTGGTTG+AGG - tig0019933:32712-32731 None:intergenic 45.0%
GAGAAGAAAAGGGAGGAATG+TGG - tig0019933:32718-32737 None:intergenic 45.0%
AGGGTGTGAAATGAAAAGGG+GGG - tig0019933:32744-32763 None:intergenic 45.0%
! GAGGGTGTGAAATGAAAAGG+GGG - tig0019933:32745-32764 None:intergenic 45.0%
! GGTGAGGGTGTGAAATGAAA+AGG - tig0019933:32748-32767 None:intergenic 45.0%
! AAGGAACATGACTTGGGTGA+GGG - tig0019933:32763-32782 None:intergenic 45.0%
! TAAGGAACATGACTTGGGTG+AGG - tig0019933:32764-32783 None:intergenic 45.0%
! TAAGGTGGTTGGGTTGTGTT+TGG - tig0019933:32821-32840 None:intergenic 45.0%
!! ATCATCGGTGTCGTTTAAGG+TGG - tig0019933:32836-32855 None:intergenic 45.0%
! TGGGACTTTATTGGTGACAG+AGG + tig0019933:32858-32877 Msa1377480:intron 45.0%
! TCAGACTCGTTGGTTGAAGA+TGG + tig0019933:32898-32917 Msa1377480:intron 45.0%
! CAGACTCGTTGGTTGAAGAT+GGG + tig0019933:32899-32918 Msa1377480:intron 45.0%
! AGACTCGTTGGTTGAAGATG+GGG + tig0019933:32900-32919 Msa1377480:intron 45.0%
GTACATAGAAGTCACGAAGC+TGG + tig0019933:32924-32943 Msa1377480:intron 45.0%
AGCTGGAGAAGATGAAGGTT+TGG + tig0019933:32941-32960 Msa1377480:intron 45.0%
GCTGGAGAAGATGAAGGTTT+GGG + tig0019933:32942-32961 Msa1377480:intron 45.0%
GAGAAGATGAAGGTTTGGGT+CGG + tig0019933:32946-32965 Msa1377480:intron 45.0%
TGCAAAAGAGGGTAGACATG+GGG + tig0019933:33226-33245 Msa1377480:intron 45.0%
!! GATAATGGAGCAGTCAGACA+TGG - tig0019933:33650-33669 None:intergenic 45.0%
CATATGCGAACGTTACTCCA+TGG - tig0019933:33715-33734 None:intergenic 45.0%
CCATGCTCGTGTGTGATTTA+GGG - tig0019933:33868-33887 None:intergenic 45.0%
TCCATGCTCGTGTGTGATTT+AGG - tig0019933:33869-33888 None:intergenic 45.0%
AAAGCAACTGATCTCGCTCT+TGG - tig0019933:34182-34201 None:intergenic 45.0%
GTCCATCTACAACAAGTGAC+AGG - tig0019933:34322-34341 None:intergenic 45.0%
ATGGACAAGACCATCTGATG+AGG + tig0019933:34336-34355 Msa1377480:CDS 45.0%
CTGCAATCTTCCTCATCAGA+TGG - tig0019933:34349-34368 None:intergenic 45.0%
GATTGCAGAATTGGACGACA+AGG + tig0019933:34361-34380 Msa1377480:CDS 45.0%
TTCAGACTGTGACAACCTCT+TGG - tig0019933:34575-34594 None:intergenic 45.0%
ACTCAGTACCGCAAATCTTC+TGG + tig0019933:34625-34644 Msa1377480:three_prime_UTR 45.0%
CAACCCCACCAATGAATGAA+AGG - tig0019933:34830-34849 None:intergenic 45.0%
!!! TTTTAATAAATAGTATTAAT+AGG + tig0019933:30704-30723 Msa1377480:intron 5.0%
!! TTTAAAAGAAAATAAAAAAA+AGG + tig0019933:32296-32315 Msa1377480:intron 5.0%
GTTTCCCTGACTGTCATCTC+AGG + tig0019933:28078-28097 Msa1377480:five_prime_UTR 50.0%
TGTCGCGATTTCGGCTGTAA+CGG + tig0019933:28506-28525 Msa1377480:intron 50.0%
CTGCACGTCGTATTACCATG+TGG - tig0019933:28862-28881 Msa1377470:intron 50.0%
CACATGGTAATACGACGTGC+AGG + tig0019933:28860-28879 Msa1377480:intron 50.0%
CACAGCAAAATCGCCGTTAC+GGG - tig0019933:29657-29676 None:intergenic 50.0%
TGGGTGGTTGCCTACATTAG+GGG - tig0019933:29840-29859 None:intergenic 50.0%
CTGGGTGGTTGCCTACATTA+GGG - tig0019933:29841-29860 None:intergenic 50.0%
AGTTCCAGTACTTTGCTGGG+TGG - tig0019933:29856-29875 None:intergenic 50.0%
!! TAGAAGCACTTGCAGCTAGC+CGG + tig0019933:30266-30285 Msa1377480:intron 50.0%
ATTAGAGGTGGGAATAGGCC+AGG + tig0019933:30313-30332 Msa1377480:intron 50.0%
!!! TTTTTTCGTAGGCCAGGCTG+AGG - tig0019933:30359-30378 None:intergenic 50.0%
AACGGCCTATGATAGGCCAT+AGG - tig0019933:30401-30420 None:intergenic 50.0%
! GCTTTTAAATAGGCCAGGCC+AGG - tig0019933:30432-30451 None:intergenic 50.0%
GCCTGGCCTATTTAAAAGCC+TGG + tig0019933:30433-30452 Msa1377480:intron 50.0%
GCCAGCCTATTAGGCTTAAC+AGG + tig0019933:30726-30745 Msa1377480:intron 50.0%
GCCTGTTAAGCCTAATAGGC+TGG - tig0019933:30730-30749 None:intergenic 50.0%
!! CTTTTCTGGAAGCCTAAGCC+TGG + tig0019933:30749-30768 Msa1377480:intron 50.0%
GCCTATCTACAAAACAGGCC+AGG + tig0019933:30813-30832 Msa1377480:intron 50.0%
! GCCTGGCCTGTTTTGTAGAT+AGG - tig0019933:30817-30836 None:intergenic 50.0%
GTCTCTATCCCATGTAGGGT+TGG + tig0019933:30912-30931 Msa1377480:intron 50.0%
TAACCCGAACCGACATGCTT+CGG - tig0019933:30981-31000 None:intergenic 50.0%
!! TGGTTTGGACTGGTCGGTTT+CGG + tig0019933:31045-31064 Msa1377480:intron 50.0%
!! GGTCGGATTCGGTTTTCGAT+GGG - tig0019933:31085-31104 None:intergenic 50.0%
! GTTGGGCTGGACTCAGTAAT+GGG - tig0019933:31130-31149 None:intergenic 50.0%
! TGTTGGGCTGGACTCAGTAA+TGG - tig0019933:31131-31150 None:intergenic 50.0%
GCACAATTGGCGTATGAGGA+AGG - tig0019933:31185-31204 None:intergenic 50.0%
TAACGGTTATCACGGGCGAA+CGG - tig0019933:31643-31662 None:intergenic 50.0%
CCATATGCGTCGTTCGGTTT+CGG - tig0019933:31677-31696 None:intergenic 50.0%
CGAAACCGAACGACGCATAT+GGG + tig0019933:31675-31694 Msa1377480:intron 50.0%
! AATCCAACCGTCGGTTGAGT+CGG + tig0019933:31715-31734 Msa1377480:intron 50.0%
! TCGAAAACCGACTCAACCGA+CGG - tig0019933:31725-31744 None:intergenic 50.0%
! ATGGGATTAGCGCTGGACAT+CGG - tig0019933:31777-31796 None:intergenic 50.0%
! TCTACACATGGGATTAGCGC+TGG - tig0019933:31784-31803 None:intergenic 50.0%
AATATCCTAGGTGCAGGCTC+GGG + tig0019933:31808-31827 Msa1377480:intron 50.0%
TTGCATGCTACAGACAAGGC+TGG + tig0019933:31971-31990 Msa1377480:intron 50.0%
GCAAAAGGGGATAGACATGG+GGG - tig0019933:32178-32197 None:intergenic 50.0%
AGGAAAGCTTGCGTGGAAAC+TGG - tig0019933:32685-32704 None:intergenic 50.0%
AGGAATGTGGTTGAGGGAGT+AGG - tig0019933:32705-32724 None:intergenic 50.0%
AGGGGGGTGAGAGAAGAAAA+GGG - tig0019933:32728-32747 None:intergenic 50.0%
AAGGGGGGTGAGAGAAGAAA+AGG - tig0019933:32729-32748 None:intergenic 50.0%
!! CGGTGTCGTTTAAGGTGGTT+GGG - tig0019933:32831-32850 None:intergenic 50.0%
!! TCGGTGTCGTTTAAGGTGGT+TGG - tig0019933:32832-32851 None:intergenic 50.0%
CACGAAGCTGGAGAAGATGA+AGG + tig0019933:32936-32955 Msa1377480:intron 50.0%
GCAAAAGAGGGTAGACATGG+GGG + tig0019933:33227-33246 Msa1377480:intron 50.0%
CAAAAGAGGGTAGACATGGG+GGG + tig0019933:33228-33247 Msa1377480:intron 50.0%
CCCTAAATCACACACGAGCA+TGG + tig0019933:33865-33884 Msa1377480:intron 50.0%
TGGCTCAGCCGCAAAAAAAG+TGG - tig0019933:34674-34693 None:intergenic 50.0%
TCTTCTCGGCACGCTGTCAA+GGG - tig0019933:28050-28069 Msa1377470:CDS 55.0%
ATCTTCTCGGCACGCTGTCA+AGG - tig0019933:28051-28070 Msa1377470:CDS 55.0%
TTGGCTGGAAAACTCCCTGG+AGG - tig0019933:28290-28309 Msa1377470:intron 55.0%
!! GCATTGGCTGGAAAACTCCC+TGG - tig0019933:28293-28312 Msa1377470:intron 55.0%
TGGTCCGTCCACCTAGATGT+GGG - tig0019933:28334-28353 Msa1377470:intron 55.0%
TTGGTCCGTCCACCTAGATG+TGG - tig0019933:28335-28354 Msa1377470:intron 55.0%
AGGTCCAAAAACGGTCACGG+TGG + tig0019933:29698-29717 Msa1377480:five_prime_UTR 55.0%
GCTGGGTGGTTGCCTACATT+AGG - tig0019933:29842-29861 None:intergenic 55.0%
GCAACCACCCAGCAAAGTAC+TGG + tig0019933:29849-29868 Msa1377480:five_prime_UTR 55.0%
ACTTGCAGCTAGCCGGCAAA+AGG + tig0019933:30273-30292 Msa1377480:intron 55.0%
CCTATGATAGGCCATAGGCC+AGG - tig0019933:30396-30415 None:intergenic 55.0%
CCTGGCCTATGGCCTATCAT+AGG + tig0019933:30393-30412 Msa1377480:intron 55.0%
!!! ATAGGCCGTTTTTCTGGGCC+TGG + tig0019933:30411-30430 Msa1377480:intron 55.0%
TCTACAAAACAGGCCAGGCC+AGG + tig0019933:30818-30837 Msa1377480:intron 55.0%
AGTAGGGTTGGGAATAGGCC+AGG - tig0019933:30885-30904 None:intergenic 55.0%
AACACCAAACCGGCCCAAAC+TGG + tig0019933:30941-30960 Msa1377480:intron 55.0%
AACCCGAACCGACATGCTTC+GGG - tig0019933:30980-30999 None:intergenic 55.0%
!! GGTTTGGACTGGTCGGTTTC+GGG + tig0019933:31046-31065 Msa1377480:intron 55.0%
!! CGGTCGGATTCGGTTTTCGA+TGG - tig0019933:31086-31105 None:intergenic 55.0%
AGCGGCACAATTGGCGTATG+AGG - tig0019933:31189-31208 None:intergenic 55.0%
TCATACGCCAATTGTGCCGC+TGG + tig0019933:31188-31207 Msa1377480:intron 55.0%
AGAGAAGGAGAAGCTGCCAG+CGG - tig0019933:31207-31226 None:intergenic 55.0%
TCGTTCGGTTTCGGCGGTTT+CGG - tig0019933:31668-31687 None:intergenic 55.0%
TATGCGTCGTTCGGTTTCGG+CGG - tig0019933:31674-31693 None:intergenic 55.0%
CCGAAACCGAACGACGCATA+TGG + tig0019933:31674-31693 Msa1377480:intron 55.0%
AACCGAACGACGCATATGGG+CGG + tig0019933:31678-31697 Msa1377480:intron 55.0%
TTCCGCCCATATGCGTCGTT+CGG - tig0019933:31683-31702 None:intergenic 55.0%
ACGACGCATATGGGCGGAAA+TGG + tig0019933:31684-31703 Msa1377480:intron 55.0%
! AAACCGACTCAACCGACGGT+TGG - tig0019933:31721-31740 None:intergenic 55.0%
!! CACCGATTTCCGACCGAAAC+CGG + tig0019933:31751-31770 Msa1377480:intron 55.0%
TTTAACCCGAGCCTGCACCT+AGG - tig0019933:31816-31835 None:intergenic 55.0%
AGGGAGTAGGAAAGCTTGCG+TGG - tig0019933:32692-32711 None:intergenic 55.0%
GGGGTGAGAGAAGAAAAGGG+AGG - tig0019933:32725-32744 None:intergenic 55.0%
ACACAGGTGGCGAGACACAT+AGG + tig0019933:33178-33197 Msa1377480:intron 55.0%
TGCGAACGTTACTCCATGGG+AGG - tig0019933:33711-33730 None:intergenic 55.0%
CAAGGGGTTGGAAGCAGAGC+TGG - tig0019933:28033-28052 Msa1377470:CDS 60.0%
CTTCTCGGCACGCTGTCAAG+GGG - tig0019933:28049-28068 Msa1377470:CDS 60.0%
! GCAGCCACCGTGACCGTTTT+TGG - tig0019933:29705-29724 None:intergenic 60.0%
! CGGTACCGGGATTGCGGTAT+CGG - tig0019933:29727-29746 None:intergenic 60.0%
! ACGGATCGGTACCGGGATTG+CGG - tig0019933:29733-29752 None:intergenic 60.0%
TGCAGCTAGCCGGCAAAAGG+AGG + tig0019933:30276-30295 Msa1377480:intron 60.0%
TATCAAAGCCTGGCCTGGCC+TGG - tig0019933:30334-30353 None:intergenic 60.0%
! AGGCCAGGCCAGGCTTTGAT+AGG + tig0019933:30333-30352 Msa1377480:intron 60.0%
AGGCCTATCAAAGCCTGGCC+TGG - tig0019933:30339-30358 None:intergenic 60.0%
GGCTGAGGCCTATCAAAGCC+TGG - tig0019933:30344-30363 None:intergenic 60.0%
! GGCTTTGATAGGCCTCAGCC+TGG + tig0019933:30344-30363 Msa1377480:intron 60.0%
ATAGGCCATAGGCCAGGCTC+AGG - tig0019933:30390-30409 None:intergenic 60.0%
CCAGGCCAGGCCCAGAAAAA+CGG - tig0019933:30419-30438 None:intergenic 60.0%
GTAGGCTTTCAGGCCAGTCC+AGG - tig0019933:30454-30473 None:intergenic 60.0%
GCCAAAACAGGCCAGGCTGT+AGG + tig0019933:30845-30864 Msa1377480:intron 60.0%
! GCCTACAGCCTGGCCTGTTT+TGG - tig0019933:30849-30868 None:intergenic 60.0%
CCAAACGGGTCGGCCAGTTT+GGG - tig0019933:30957-30976 None:intergenic 60.0%
ATGCTTCGGGCCAAACGGGT+CGG - tig0019933:30967-30986 None:intergenic 60.0%
CGACATGCTTCGGGCCAAAC+GGG - tig0019933:30971-30990 None:intergenic 60.0%
CCGACATGCTTCGGGCCAAA+CGG - tig0019933:30972-30991 None:intergenic 60.0%
CCGTTTGGCCCGAAGCATGT+CGG + tig0019933:30969-30988 Msa1377480:intron 60.0%
! TGGCCCGAAGCATGTCGGTT+CGG + tig0019933:30974-30993 Msa1377480:intron 60.0%
!! TTGGACTGGTCGGTTTCGGG+TGG + tig0019933:31049-31068 Msa1377480:intron 60.0%
GAAGCTGCCAGCGGCACAAT+TGG - tig0019933:31198-31217 None:intergenic 60.0%
! GGCCGGTTTCGGTCGGAAAT+CGG - tig0019933:31756-31775 None:intergenic 60.0%
! GATTAGCGCTGGACATCGGC+CGG - tig0019933:31773-31792 None:intergenic 60.0%
TCGGCACGCTGTCAAGGGGT+TGG - tig0019933:28045-28064 Msa1377470:CDS 65.0%
TCGCGATCGCGGTCGCGTTA+AGG + tig0019933:28482-28501 Msa1377480:intron 65.0%
ACGGCATTTCGCGGCCGTAG+CGG + tig0019933:29622-29641 Msa1377480:five_prime_UTR 65.0%
ACGGGCGCGAAATGCCGCTA+CGG - tig0019933:29639-29658 None:intergenic 65.0%
GCGGCATTTCGCGCCCGTAA+CGG + tig0019933:29641-29660 Msa1377480:five_prime_UTR 65.0%
GGCTGCCGATACCGCAATCC+CGG + tig0019933:29719-29738 Msa1377480:five_prime_UTR 65.0%
AGGTGGGAATAGGCCAGGCC+AGG + tig0019933:30318-30337 Msa1377480:intron 65.0%
ACAGGCCTGAGCCTGGCCTA+TGG + tig0019933:30382-30401 Msa1377480:intron 65.0%
!! CCGTTTTTCTGGGCCTGGCC+TGG + tig0019933:30416-30435 Msa1377480:intron 65.0%
AAAACAGGCCAGGCCAGGCC+AGG + tig0019933:30823-30842 Msa1377480:intron 65.0%
!!! TGTTTTGGCCTGGCCTGGCC+TGG - tig0019933:30834-30853 None:intergenic 65.0%
AGGCCAGGCCAGGCCAAAAC+AGG + tig0019933:30833-30852 Msa1377480:intron 65.0%
!!! TGGCCTGTTTTGGCCTGGCC+TGG - tig0019933:30839-30858 None:intergenic 65.0%
AGGCCAGGCCAAAACAGGCC+AGG + tig0019933:30838-30857 Msa1377480:intron 65.0%
!!! CAGCCTGGCCTGTTTTGGCC+TGG - tig0019933:30844-30863 None:intergenic 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - tig0019933:30872-30891 None:intergenic 65.0%
AATAGGCCAGGCCGGCCTAC+AGG - tig0019933:30873-30892 None:intergenic 65.0%
GGGTTGGGAATAGGCCAGGC+CGG - tig0019933:30881-30900 None:intergenic 65.0%
TCGGCCAGTTTGGGCCGGTT+TGG - tig0019933:30948-30967 None:intergenic 65.0%
CCCAAACTGGCCGACCCGTT+TGG + tig0019933:30954-30973 Msa1377480:intron 65.0%
GCCAAACGGGTCGGCCAGTT+TGG - tig0019933:30958-30977 None:intergenic 65.0%
!! GGCCCGAAGCATGTCGGTTC+GGG + tig0019933:30975-30994 Msa1377480:intron 65.0%
! CTGGTCGGTTTCGGGTGGTG+TGG + tig0019933:31054-31073 Msa1377480:intron 65.0%
! GGACATCGGCCGGTTTCGGT+CGG - tig0019933:31763-31782 None:intergenic 65.0%
! CGCTGGACATCGGCCGGTTT+CGG - tig0019933:31767-31786 None:intergenic 65.0%
AGCCTACATGGCACGCCACC+TGG + tig0019933:32222-32241 Msa1377480:intron 65.0%
GCCTACATGGCACGCCACCT+GGG + tig0019933:32223-32242 Msa1377480:intron 65.0%
ACCCAGGTGGCGTGCCATGT+AGG - tig0019933:32227-32246 None:intergenic 65.0%
GGAATAGGCCAGGCCAGGCC+AGG + tig0019933:30323-30342 Msa1377480:intron 70.0%
GCCAGGCTGTAGGCCCCTGT+AGG + tig0019933:30855-30874 Msa1377480:intron 70.0%
GCCTACAGGGGCCTACAGCC+TGG - tig0019933:30859-30878 None:intergenic 70.0%
GGCTGTAGGCCCCTGTAGGC+CGG + tig0019933:30859-30878 Msa1377480:intron 70.0%
TAGGCCAGGCCGGCCTACAG+GGG - tig0019933:30871-30890 None:intergenic 70.0%
ACGGGTCGGCCAGTTTGGGC+CGG - tig0019933:30953-30972 None:intergenic 70.0%
TAGGCCCCTGTAGGCCGGCC+TGG + tig0019933:30864-30883 Msa1377480:intron 75.0%
Chromosome Type Strat End Strand Name
tig0019933 gene 28020 34913 28020 ID=Msa1377480;Name=Msa1377480
tig0019933 mRNA 28020 34913 28020 ID=Msa1377480-mRNA-1;Parent=Msa1377480;Name=Msa1377480-mRNA-1;_AED=0.11;_eAED=0.17;_QI=765|0.62|0.77|0.88|0.37|0.44|9|429|192
tig0019933 exon 28020 28139 28020 ID=Msa1377480-mRNA-1:exon:5657;Parent=Msa1377480-mRNA-1
tig0019933 exon 28294 28366 28294 ID=Msa1377480-mRNA-1:exon:5658;Parent=Msa1377480-mRNA-1
tig0019933 exon 29306 29913 29306 ID=Msa1377480-mRNA-1:exon:5659;Parent=Msa1377480-mRNA-1
tig0019933 exon 29992 30253 29992 ID=Msa1377480-mRNA-1:exon:5660;Parent=Msa1377480-mRNA-1
tig0019933 exon 33400 33494 33400 ID=Msa1377480-mRNA-1:exon:5661;Parent=Msa1377480-mRNA-1
tig0019933 exon 33619 33629 33619 ID=Msa1377480-mRNA-1:exon:5662;Parent=Msa1377480-mRNA-1
tig0019933 exon 34113 34235 34113 ID=Msa1377480-mRNA-1:exon:5663;Parent=Msa1377480-mRNA-1
tig0019933 exon 34336 34442 34336 ID=Msa1377480-mRNA-1:exon:5664;Parent=Msa1377480-mRNA-1
tig0019933 exon 34540 34913 34540 ID=Msa1377480-mRNA-1:exon:5665;Parent=Msa1377480-mRNA-1
tig0019933 five_prime_UTR 28020 28139 28020 ID=Msa1377480-mRNA-1:five_prime_utr;Parent=Msa1377480-mRNA-1
tig0019933 five_prime_UTR 28294 28366 28294 ID=Msa1377480-mRNA-1:five_prime_utr;Parent=Msa1377480-mRNA-1
tig0019933 five_prime_UTR 29306 29877 29306 ID=Msa1377480-mRNA-1:five_prime_utr;Parent=Msa1377480-mRNA-1
tig0019933 CDS 29878 29913 29878 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 CDS 29992 30253 29992 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 CDS 33400 33494 33400 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 CDS 33619 33629 33619 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 CDS 34113 34235 34113 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 CDS 34336 34387 34336 ID=Msa1377480-mRNA-1:cds;Parent=Msa1377480-mRNA-1
tig0019933 three_prime_UTR 34388 34442 34388 ID=Msa1377480-mRNA-1:three_prime_utr;Parent=Msa1377480-mRNA-1
tig0019933 three_prime_UTR 34540 34913 34540 ID=Msa1377480-mRNA-1:three_prime_utr;Parent=Msa1377480-mRNA-1
Gene Sequence

>Msa1377480

ATGATTGAAAATGAAAACGCAGAGAAAGATCAGGAGCCCAAACATTGCAGTACCAGCAGATGGTACGTACCAATACAAGTTCCGGTTTTATTGAATAGTTTTCACATTACGCTAAGATCAAGTTTGATTAACAATTTTTTATTTGAAAAACCAAAAATATTCCGTGAAATGAAAACAGATATGTCATATTCAACATCCATGGCACCAACATCAGAGAAATGGGGAAAATGTCAACAAGGACTAGAGGTTCAGCAGATGAATCATGAGAAAGATCAAGAATTGTCAGTGGCAAGGCTCCAATTTGATAGACCAGAACCAAATCTTATGGACCAAAACCAAATCGTTAATTTAGTGGAGGAAGCTCATCATCAGAGAGAAGAGTTCTTTGCAAAGGAAAGAGAGAGCTGCATATCGAACCTGAAAACTAGAGAGGCAGATATGCTTGCTACTCAGATAGCAGTGCAGCAACTCCAAGAGCGAGATCAGTTGCTTTCTGCGCAAAATGAAATGTTGAGGGTACTACTAGGATGGACAAGACCATCTGATGAGGAAGATTGCAGAATTGGACGACAAGGTTAA
Protein sequence

>Msa1377480

MIENENAEKDQEPKHCSTSRWYVPIQVPVLLNSFHITLRSSLINNFLFEKPKIFREMKTDMSYSTSMAPTSEKWGKCQQGLEVQQMNHEKDQELSVARLQFDRPEPNLMDQNQIVNLVEEAHHQREEFFAKERESCISNLKTREADMLATQIAVQQLQERDQLLSAQNEMLRVLLGWTRPSDEEDCRIGRQG*