Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222520 | XP_003610290.1 | 96.919 | 779 | 19 | 1 | 1 | 774 | 1 | 779 | 0.0 | 1536 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222520 | sp|Q93ZT6|IF4G1_ARATH | 64.223 | 791 | 253 | 12 | 1 | 772 | 1 | 780 | 0.0 | 955 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1069840 | Msa1222520 | 0.824176 | 9.301174e-54 | -8.615850e-47 |
Msa1131350 | Msa1222520 | 0.833743 | 4.475623e-56 | -8.615850e-47 |
Msa1222520 | Msa1264540 | 0.810095 | 1.366505e-50 | -8.615850e-47 |
Msa1222520 | Msa1314110 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
Msa1222520 | Msa1377480 | -0.803878 | 2.825645e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222520 | MtrunA17_Chr4g0073751 | 96.791 | 779 | 19 | 2 | 1 | 774 | 1 | 778 | 0.0 | 1530 |
Msa1222520 | MtrunA17_Chr7g0233281 | 30.341 | 646 | 361 | 19 | 178 | 759 | 1130 | 1750 | 2.50e-67 | 243 |
Msa1222520 | MtrunA17_Chr8g0336451 | 43.885 | 278 | 141 | 6 | 178 | 449 | 1014 | 1282 | 5.49e-57 | 212 |
Msa1222520 | MtrunA17_Chr8g0336451 | 25.862 | 174 | 116 | 3 | 588 | 752 | 1471 | 1640 | 5.26e-11 | 66.6 |
Msa1222520 | MtrunA17_Chr8g0335521 | 40.698 | 172 | 90 | 4 | 249 | 415 | 1 | 165 | 9.82e-31 | 119 |
Msa1222520 | MtrunA17_Chr8g0335511 | 42.537 | 134 | 58 | 5 | 249 | 372 | 1 | 125 | 2.19e-21 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222520 | AT5G57870.2 | 64.422 | 787 | 254 | 11 | 1 | 772 | 1 | 776 | 0.0 | 959 |
Msa1222520 | AT5G57870.1 | 64.223 | 791 | 253 | 12 | 1 | 772 | 1 | 780 | 0.0 | 955 |
Msa1222520 | AT2G24050.1 | 56.066 | 783 | 295 | 14 | 2 | 773 | 3 | 747 | 0.0 | 822 |
Msa1222520 | AT4G30680.1 | 51.293 | 232 | 88 | 4 | 551 | 772 | 46 | 262 | 3.96e-68 | 226 |
Msa1222520 | AT1G62410.1 | 51.042 | 192 | 91 | 3 | 236 | 427 | 10 | 198 | 1.36e-56 | 193 |
Msa1222520 | AT3G60240.2 | 30.294 | 647 | 366 | 19 | 178 | 759 | 1068 | 1694 | 2.57e-55 | 207 |
Msa1222520 | AT3G60240.3 | 30.294 | 647 | 366 | 19 | 178 | 759 | 1070 | 1696 | 3.06e-55 | 207 |
Msa1222520 | AT3G60240.4 | 30.294 | 647 | 366 | 19 | 178 | 759 | 1072 | 1698 | 3.23e-55 | 207 |
Find 248 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACAAAATCCTTAGCTTTA+TGG | 0.090186 | 8_1:-86775129 | None:intergenic |
TCATTTATACGTCGTGATTT+TGG | 0.091286 | 8_1:-86773625 | None:intergenic |
ATCAAGGAGAATAGAGATTT+TGG | 0.189476 | 8_1:+86772176 | Msa1222520:CDS |
ATTATCTCACCAAAGTTATT+TGG | 0.189868 | 8_1:-86774689 | None:intergenic |
CCAAAGTTATTTGGTGCTTT+AGG | 0.190815 | 8_1:-86774680 | None:intergenic |
CACAAATCTTGTGTGAAATA+AGG | 0.192420 | 8_1:+86769054 | Msa1222520:five_prime_UTR |
CAGAGTTGAATATTGCTTTC+TGG | 0.192911 | 8_1:-86774790 | None:intergenic |
CTTGGAAATATCCGTTTAAT+TGG | 0.195852 | 8_1:+86773349 | Msa1222520:CDS |
AATAACTTTGGTGAGATAAT+AGG | 0.208779 | 8_1:+86774692 | Msa1222520:CDS |
ATATTTCAATGTTCGGCTTT+TGG | 0.225739 | 8_1:+86774436 | Msa1222520:CDS |
CCGCAAAACTGTCTCTCTTT+TGG | 0.226031 | 8_1:+86774409 | Msa1222520:CDS |
AATCGATCAATTGACCTTTC+AGG | 0.239554 | 8_1:-86772943 | None:intergenic |
TCTTCCAATTCACCTGCTTT+TGG | 0.245582 | 8_1:+86769428 | Msa1222520:CDS |
ATGAATTTCACTGATGGTTT+TGG | 0.251981 | 8_1:-86773892 | None:intergenic |
ATTACCCTTTAACAGTCTTT+AGG | 0.276358 | 8_1:-86772543 | None:intergenic |
ATGTTATGAACAGGAGCTTT+TGG | 0.297195 | 8_1:+86773510 | Msa1222520:intron |
CGTGTCCTAAAGACTGTTAA+AGG | 0.309749 | 8_1:+86772538 | Msa1222520:CDS |
TGACAGAGTAATTGTTAAAC+TGG | 0.324188 | 8_1:+86775261 | Msa1222520:three_prime_UTR |
TAGATTTGCGTGCTAGCAAC+TGG | 0.327346 | 8_1:+86773728 | Msa1222520:CDS |
GTCAGAGAGAGTTCCCCTTC+TGG | 0.328732 | 8_1:-86772509 | None:intergenic |
ACAAATCTTGTGTGAAATAA+GGG | 0.329439 | 8_1:+86769055 | Msa1222520:five_prime_UTR |
AAAGGTCAATTGATCGATTC+TGG | 0.330744 | 8_1:+86772947 | Msa1222520:CDS |
CAGCACCTTCAAAAGCTTCC+TGG | 0.332630 | 8_1:-86773237 | None:intergenic |
TTTGTTATTTGCTTCTCTGC+TGG | 0.337261 | 8_1:+86774637 | Msa1222520:CDS |
CCGCGCCAGTCACGGTTATC+TGG | 0.346315 | 8_1:-86772104 | None:intergenic |
GCTTCTCTGCTGGATGATAT+TGG | 0.349158 | 8_1:+86774647 | Msa1222520:CDS |
GATTGTCCATCACATTGTTC+AGG | 0.354720 | 8_1:+86773405 | Msa1222520:CDS |
GATTAATTCATTCATCTATT+CGG | 0.357429 | 8_1:+86769273 | Msa1222520:five_prime_UTR |
CTGGTATTGATAATGATAAC+TGG | 0.358281 | 8_1:+86774087 | Msa1222520:CDS |
TTCTTCTCTCCTCGCTTTCA+AGG | 0.359180 | 8_1:+86769496 | Msa1222520:CDS |
GAGGCAGTAACTTCGAGTTT+AGG | 0.366612 | 8_1:-86774205 | None:intergenic |
ATAACTTTGGTGAGATAATA+GGG | 0.367050 | 8_1:+86774693 | Msa1222520:CDS |
GACATGTCTGGCGCTCAAAC+TGG | 0.369217 | 8_1:+86774143 | Msa1222520:CDS |
ATGAGAAACACCCGTGTTAC+TGG | 0.369273 | 8_1:+86773963 | Msa1222520:CDS |
ATGGCTTCCTTCACAACCTC+TGG | 0.370494 | 8_1:-86774506 | None:intergenic |
AAGATAGTGGCCCATCCCTT+AGG | 0.374998 | 8_1:+86775185 | Msa1222520:three_prime_UTR |
CTAATGAAATACAAAACATT+TGG | 0.375264 | 8_1:-86775212 | None:intergenic |
TCAGAGGATGCGGCAGAAAC+AGG | 0.377079 | 8_1:-86774341 | None:intergenic |
GGAACCAAAAGCAGGTGAAT+TGG | 0.379809 | 8_1:-86769432 | None:intergenic |
CGTCGCTCTGTCTCCTGCTC+AGG | 0.381086 | 8_1:-86773295 | None:intergenic |
TGGAAGAATATTTCAATGTT+CGG | 0.385915 | 8_1:+86774429 | Msa1222520:CDS |
AGAGAAGAAGCAGCAGCATT+AGG | 0.387879 | 8_1:-86769482 | None:intergenic |
TAAGGGATGGGCCACTATCT+TGG | 0.388326 | 8_1:-86775183 | None:intergenic |
TTCTTCTCTTTCAATCGATT+CGG | 0.389936 | 8_1:+86769229 | Msa1222520:five_prime_UTR |
TTTATCTAGTCCAAGAGAAA+TGG | 0.396310 | 8_1:-86774525 | None:intergenic |
CTTGTTAAAATTCGTACCCT+TGG | 0.399395 | 8_1:+86773331 | Msa1222520:CDS |
TGCATCCGGGCAAGCTGTAT+TGG | 0.400403 | 8_1:+86774832 | Msa1222520:CDS |
TTCCTTGCACCTGGCATCCC+AGG | 0.405562 | 8_1:-86774050 | None:intergenic |
ATCTGACATTGAGGCCTGCC+AGG | 0.413310 | 8_1:+86774865 | Msa1222520:CDS |
CTCATACCTGCGGTGGCACC+TGG | 0.416307 | 8_1:-86773945 | None:intergenic |
CATTTCATTGATATTTGATA+AGG | 0.416415 | 8_1:+86773081 | Msa1222520:CDS |
TTGTGCTCAATTCTTTCAAC+CGG | 0.417409 | 8_1:-86773660 | None:intergenic |
AGATAGTGGCCCATCCCTTA+GGG | 0.418813 | 8_1:+86775186 | Msa1222520:three_prime_UTR |
GTGAAGGAAGCCATTTCTCT+TGG | 0.420240 | 8_1:+86774515 | Msa1222520:CDS |
CCTAAAGCACCAAATAACTT+TGG | 0.423387 | 8_1:+86774680 | Msa1222520:CDS |
TTCAAGGTAACACAGGAGCC+GGG | 0.424343 | 8_1:+86773988 | Msa1222520:CDS |
CTGGTGGTGGTCGAGGAAAC+AGG | 0.425539 | 8_1:+86769378 | Msa1222520:CDS |
GTCGCTCTGTCTCCTGCTCA+GGG | 0.430901 | 8_1:-86773294 | None:intergenic |
AGTCGTCACCCACCTTCTTA+AGG | 0.441395 | 8_1:-86774763 | None:intergenic |
GTCGTAGAGTTGTTTATTGA+GGG | 0.441606 | 8_1:+86775096 | Msa1222520:three_prime_UTR |
GGTTTAATGCCTGGGATGCC+AGG | 0.446724 | 8_1:+86774041 | Msa1222520:CDS |
CGATTCACTCAAACAGAGCC+TGG | 0.447762 | 8_1:-86774883 | None:intergenic |
ATGAGAAAGATCAGATGAAA+AGG | 0.447907 | 8_1:-86769453 | None:intergenic |
CTAACGCAGATGAGAGGTCT+TGG | 0.449252 | 8_1:+86772147 | Msa1222520:CDS |
CCCCTTGGTTAGTCCTCGGT+TGG | 0.450459 | 8_1:-86772226 | None:intergenic |
GGCTTCCCCATTGCCCGACC+TGG | 0.450517 | 8_1:+86774011 | Msa1222520:CDS |
TGGCAAACTGAGGGAAGAAT+TGG | 0.450911 | 8_1:+86773258 | Msa1222520:CDS |
TGCACCACGGATGAAATTCA+TGG | 0.451931 | 8_1:+86773693 | Msa1222520:CDS |
CTTCACAACCTCTGGGTGAT+AGG | 0.455759 | 8_1:-86774498 | None:intergenic |
GATGAGGCAGAAAAGAATCT+TGG | 0.455983 | 8_1:+86773915 | Msa1222520:CDS |
GTAGCTGAAACAATGTTTGA+TGG | 0.457340 | 8_1:-86774299 | None:intergenic |
CAGGTAATTAGCTCTGCATC+CGG | 0.457787 | 8_1:+86774818 | Msa1222520:CDS |
CTCCCACCAGGTTCTTCAGA+TGG | 0.458717 | 8_1:-86773178 | None:intergenic |
CTCATCATGAATTTCACTGA+TGG | 0.459387 | 8_1:-86773898 | None:intergenic |
GCAGATGACTTCCCCTGAGC+AGG | 0.464243 | 8_1:+86773282 | Msa1222520:CDS |
TGGCATATGATTTAGCCAAC+TGG | 0.465040 | 8_1:-86775153 | None:intergenic |
AAGAAGAAGAAGGATTGGAT+TGG | 0.465680 | 8_1:-86769185 | None:intergenic |
CGAGTTTAGGACTGGTGGCT+TGG | 0.467809 | 8_1:-86774192 | None:intergenic |
CGTATAAATGATATGTACTT+TGG | 0.467887 | 8_1:+86773637 | Msa1222520:CDS |
TCCTGTACCAGGTCGGGCAA+TGG | 0.470133 | 8_1:-86774018 | None:intergenic |
ACCCGTGTTACTGGTGTTCA+AGG | 0.471912 | 8_1:+86773972 | Msa1222520:CDS |
AAACAGATACTCAATAAGAT+TGG | 0.472446 | 8_1:-86774573 | None:intergenic |
GCTTGGAAAGATAAGGAGAT+TGG | 0.472535 | 8_1:-86774175 | None:intergenic |
AATATTCAACTCTGCAGTGC+AGG | 0.473416 | 8_1:+86774799 | Msa1222520:CDS |
GAAGAGGAAGAATCGAATCT+AGG | 0.473729 | 8_1:-86769410 | None:intergenic |
CTCTTTCAAGCGTTTAAGAT+CGG | 0.475231 | 8_1:+86769317 | Msa1222520:five_prime_UTR |
GGTACAGGAGGTTTAATGCC+TGG | 0.475869 | 8_1:+86774032 | Msa1222520:CDS |
CTGAGCTTTAAAATATCCTC+AGG | 0.476852 | 8_1:-86771672 | None:intergenic |
CCAGGCATCTTCCTTGCACC+TGG | 0.477958 | 8_1:-86774059 | None:intergenic |
TACATCAGCTGACATATTGA+AGG | 0.478842 | 8_1:+86772973 | Msa1222520:CDS |
TGTCGTAGAGTTGTTTATTG+AGG | 0.480579 | 8_1:+86775095 | Msa1222520:three_prime_UTR |
GACCTCTCATCTGCGTTAGC+AGG | 0.481346 | 8_1:-86772143 | None:intergenic |
TTCTGACAGCAATGTGTGTC+CGG | 0.481571 | 8_1:+86773537 | Msa1222520:CDS |
TCACTCAAACAGAGCCTGGC+AGG | 0.484206 | 8_1:-86774879 | None:intergenic |
GGTTATCTGGTTCAGAGTAT+CGG | 0.484466 | 8_1:-86772091 | None:intergenic |
TCGGGCAATGGGGAAGCCCC+CGG | 0.485209 | 8_1:-86774006 | None:intergenic |
GAAACAGGTTTGACAGGTGC+AGG | 0.485884 | 8_1:-86774326 | None:intergenic |
AGAACACAGCTGAGCATACA+TGG | 0.487214 | 8_1:-86773128 | None:intergenic |
TCAGCAGCTCACCAATTAAA+CGG | 0.488084 | 8_1:-86773360 | None:intergenic |
GGATATTTCTCTCTCTTCTA+CGG | 0.488160 | 8_1:-86769130 | None:intergenic |
TAAACCTCCTGTACCAGGTC+GGG | 0.488580 | 8_1:-86774024 | None:intergenic |
AAGAATAGTGCCCTGGTGCT+TGG | 0.489140 | 8_1:+86774254 | Msa1222520:CDS |
GGCATTAAACCTCCTGTACC+AGG | 0.491138 | 8_1:-86774029 | None:intergenic |
GGCAGTAGTGGTCTTATAAG+TGG | 0.491263 | 8_1:+86774230 | Msa1222520:CDS |
TTGAGGCCTGGTGGTGGTCG+AGG | 0.493401 | 8_1:+86769371 | Msa1222520:CDS |
ATTACCCCTTGGTTAGTCCT+CGG | 0.494191 | 8_1:-86772230 | None:intergenic |
GCCAAGTTTCTCCAAGATAG+TGG | 0.497896 | 8_1:+86775172 | Msa1222520:three_prime_UTR |
GCCACTATCTTGGAGAAACT+TGG | 0.498642 | 8_1:-86775173 | None:intergenic |
GTACAGGAGGTTTAATGCCT+GGG | 0.499687 | 8_1:+86774033 | Msa1222520:CDS |
AGGAAGATGCCTGGGATGCC+TGG | 0.500937 | 8_1:+86774068 | Msa1222520:CDS |
TAACGCAGATGAGAGGTCTT+GGG | 0.503548 | 8_1:+86772148 | Msa1222520:CDS |
TGAATCCAATACAGCTTGCC+CGG | 0.506839 | 8_1:-86774837 | None:intergenic |
GGAGACAGAGCGACGCGACA+AGG | 0.508278 | 8_1:+86773303 | Msa1222520:CDS |
CCATTCCCATCTGAAGAACC+TGG | 0.508946 | 8_1:+86773172 | Msa1222520:CDS |
CAGTTATCATTATCAATACC+AGG | 0.509294 | 8_1:-86774086 | None:intergenic |
ATTCTCACAGCTAGAGACAT+AGG | 0.510836 | 8_1:+86774605 | Msa1222520:CDS |
TTGCGTCCAGGTGCCACCGC+AGG | 0.512854 | 8_1:+86773939 | Msa1222520:CDS |
AGCTAGGTTATTGTATCGAA+TGG | 0.513363 | 8_1:-86769151 | None:intergenic |
TTCATCCGTGGTGCAAGTTG+AGG | 0.513989 | 8_1:-86773685 | None:intergenic |
CGCATCCTCTGAGAAGCCAC+AGG | 0.515075 | 8_1:+86774352 | Msa1222520:CDS |
AGTGCCCTGGTGCTTGGAGG+TGG | 0.515826 | 8_1:+86774260 | Msa1222520:CDS |
AAAATTGAAGAAGAAGAAGA+AGG | 0.516163 | 8_1:-86769195 | None:intergenic |
AGTACTCTTGAATAACTGCC+AGG | 0.516772 | 8_1:+86773219 | Msa1222520:CDS |
GAGTACCACCTCCAAGCACC+AGG | 0.522553 | 8_1:-86774265 | None:intergenic |
GCGGCAGAAACAGGTTTGAC+AGG | 0.523330 | 8_1:-86774332 | None:intergenic |
GTGTCCTAAAGACTGTTAAA+GGG | 0.527058 | 8_1:+86772539 | Msa1222520:CDS |
ATGCCAAGAGGAGACATGTC+TGG | 0.528143 | 8_1:+86774131 | Msa1222520:CDS |
CTTGGCATAGATCTAGTCCT+AGG | 0.530725 | 8_1:-86774116 | None:intergenic |
CTGTTTCCTCGACCACCACC+AGG | 0.531162 | 8_1:-86769377 | None:intergenic |
GCGCCAGACATGTCTCCTCT+TGG | 0.531609 | 8_1:-86774134 | None:intergenic |
TAAATGATATGTACTTTGGC+CGG | 0.531822 | 8_1:+86773641 | Msa1222520:CDS |
GTTCAAGGTAACACAGGAGC+CGG | 0.535052 | 8_1:+86773987 | Msa1222520:CDS |
AAGAATCTTGGATTGCGTCC+AGG | 0.535994 | 8_1:+86773927 | Msa1222520:CDS |
CCAGGTGCAAGGAAGATGCC+TGG | 0.538988 | 8_1:+86774059 | Msa1222520:CDS |
TCCCACCAGGTTCTTCAGAT+GGG | 0.539022 | 8_1:-86773177 | None:intergenic |
TAGTATATCGCACACGCTCA+CGG | 0.539501 | 8_1:-86771334 | None:intergenic |
ATGTTTGATGGTAGAGCAGA+AGG | 0.541973 | 8_1:-86774287 | None:intergenic |
AACTGATGAAAATACCTGAC+TGG | 0.543824 | 8_1:-86775050 | None:intergenic |
AATAGTGCCCTGGTGCTTGG+AGG | 0.543990 | 8_1:+86774257 | Msa1222520:CDS |
TTACAGTAAGAATATTAAAG+TGG | 0.546044 | 8_1:+86775022 | Msa1222520:three_prime_UTR |
CTGGGTTCCACGACGTGAAG+AGG | 0.547411 | 8_1:+86773747 | Msa1222520:CDS |
TTAAAGTGGAGCTTCCAGTC+AGG | 0.550875 | 8_1:+86775036 | Msa1222520:three_prime_UTR |
CAATTAAACGGATATTTCCA+AGG | 0.551767 | 8_1:-86773348 | None:intergenic |
GGTACCATGGTCTGCCAGAA+GGG | 0.552738 | 8_1:+86772495 | Msa1222520:CDS |
CCAGGTTCTTCAGATGGGAA+TGG | 0.557041 | 8_1:-86773172 | None:intergenic |
GATGAAAAGGAACCAAAAGC+AGG | 0.557782 | 8_1:-86769440 | None:intergenic |
ACAGTTCTTAGCTTGAGGCC+TGG | 0.557823 | 8_1:+86769359 | Msa1222520:CDS |
GCAGTAGTGGTCTTATAAGT+GGG | 0.558577 | 8_1:+86774231 | Msa1222520:CDS |
GCATACATGGGGCAGAATGT+TGG | 0.560079 | 8_1:-86773115 | None:intergenic |
CTGAACCAGATAACCGTGAC+TGG | 0.560484 | 8_1:+86772099 | Msa1222520:CDS |
AACTTCGAGTTTAGGACTGG+TGG | 0.562135 | 8_1:-86774197 | None:intergenic |
AAAGTTAAACCATAAAGCTA+AGG | 0.562399 | 8_1:+86775120 | Msa1222520:three_prime_UTR |
TTGAAGGTGCTGGCAAACTG+AGG | 0.563108 | 8_1:+86773248 | Msa1222520:CDS |
CAAAGAGATCCTTAAGAAGG+TGG | 0.563302 | 8_1:+86774754 | Msa1222520:CDS |
ATCAAACAGTTCTTAGCTTG+AGG | 0.563462 | 8_1:+86769354 | Msa1222520:CDS |
CTGTGGCTTCTCAGAGGATG+CGG | 0.565551 | 8_1:-86774351 | None:intergenic |
TGAAGGTGCTGGCAAACTGA+GGG | 0.567492 | 8_1:+86773249 | Msa1222520:CDS |
CTTAGCTTGAGGCCTGGTGG+TGG | 0.568270 | 8_1:+86769365 | Msa1222520:CDS |
GCCTTGACTAGAGTAGGAGC+AGG | 0.568284 | 8_1:-86772469 | None:intergenic |
ACTGGTGGCTTGGAAAGATA+AGG | 0.568955 | 8_1:-86774182 | None:intergenic |
AAAAGCAGGTGAATTGGAAG+AGG | 0.570760 | 8_1:-86769426 | None:intergenic |
ATGATAACTGGGAAGTGCCT+AGG | 0.570955 | 8_1:+86774099 | Msa1222520:CDS |
AAAGTTATTTCTCTCCCACC+AGG | 0.570956 | 8_1:-86773190 | None:intergenic |
AGGTACCATGGTCTGCCAGA+AGG | 0.573716 | 8_1:+86772494 | Msa1222520:CDS |
GGACGAGGCATTACAGTGTG+TGG | 0.573830 | 8_1:+86774457 | Msa1222520:CDS |
TACCTTGAACACCAGTAACA+CGG | 0.575093 | 8_1:-86773974 | None:intergenic |
CTGCGTTGCGTTACAAAGGA+GGG | 0.576591 | 8_1:-86769089 | None:intergenic |
AACTCGAAGTTACTGCCTCA+AGG | 0.578145 | 8_1:+86774209 | Msa1222520:CDS |
CAGCAATGTGTGTCCGGCTG+AGG | 0.579953 | 8_1:+86773543 | Msa1222520:CDS |
GAGGTCTTGGGATAATATCA+AGG | 0.581182 | 8_1:+86772160 | Msa1222520:CDS |
ACCTGCTCCTACTCTAGTCA+AGG | 0.581234 | 8_1:+86772468 | Msa1222520:CDS |
TGGCTTCCTTCACAACCTCT+GGG | 0.581434 | 8_1:-86774505 | None:intergenic |
CACCTTAAAGTCCAAACCCC+CGG | 0.581439 | 8_1:-86774729 | None:intergenic |
CAGAACGGCCGCGCCAGTCA+CGG | 0.582325 | 8_1:-86772112 | None:intergenic |
ATTAATCAAAATTGATTCAG+CGG | 0.583942 | 8_1:-86769257 | None:intergenic |
TTCTCACAGCTAGAGACATA+GGG | 0.584310 | 8_1:+86774606 | Msa1222520:CDS |
ACAGCTAGAGACATAGGGAC+TGG | 0.586212 | 8_1:+86774611 | Msa1222520:CDS |
CATCAGTGAAATTCATGATG+AGG | 0.586747 | 8_1:+86773899 | Msa1222520:CDS |
AGTAACTTCGAGTTTAGGAC+TGG | 0.587370 | 8_1:-86774200 | None:intergenic |
TAGCAGGAGGTTGTGCAGAA+CGG | 0.590577 | 8_1:-86772127 | None:intergenic |
TTCACAAGCATCTGACATTG+AGG | 0.592421 | 8_1:+86774856 | Msa1222520:CDS |
TTAATTATACCTTGAAAGCG+AGG | 0.594084 | 8_1:-86769505 | None:intergenic |
CTCTCATCTGCGTTAGCAGG+AGG | 0.594836 | 8_1:-86772140 | None:intergenic |
TTATCAATACCAGGCATCCC+AGG | 0.595243 | 8_1:-86774077 | None:intergenic |
ACAACCTCTGGGTGATAGGT+CGG | 0.598080 | 8_1:-86774494 | None:intergenic |
TTACTGCCTCAAGGCAGTAG+TGG | 0.598742 | 8_1:+86774218 | Msa1222520:CDS |
AGGTAATTAGCTCTGCATCC+GGG | 0.599002 | 8_1:+86774819 | Msa1222520:CDS |
TTTGGTGAAGATCAAAGTTG+GGG | 0.599005 | 8_1:+86771717 | Msa1222520:CDS |
TGCCTGGGATGCCAGGTGCA+AGG | 0.601532 | 8_1:+86774048 | Msa1222520:CDS |
GGTCAAAGAGATCCTTAAGA+AGG | 0.601546 | 8_1:+86774751 | Msa1222520:CDS |
TGAGCTTTAAAATATCCTCA+GGG | 0.601585 | 8_1:-86771671 | None:intergenic |
GTTCTTAGCTTGAGGCCTGG+TGG | 0.603783 | 8_1:+86769362 | Msa1222520:CDS |
TCAAGGTAACACAGGAGCCG+GGG | 0.607257 | 8_1:+86773989 | Msa1222520:CDS |
AAGTGGGAAGAATAGTGCCC+TGG | 0.611452 | 8_1:+86774247 | Msa1222520:CDS |
TGCGTTGCGTTACAAAGGAG+GGG | 0.612435 | 8_1:-86769088 | None:intergenic |
TGGGGCCTGTGGCTTCTCAG+AGG | 0.613293 | 8_1:-86774357 | None:intergenic |
AGATTTGCGTGCTAGCAACT+GGG | 0.613740 | 8_1:+86773729 | Msa1222520:CDS |
AGAACTGCGTTGCGTTACAA+AGG | 0.614447 | 8_1:-86769093 | None:intergenic |
TAGTCAAGGCTGAGGTACCA+TGG | 0.619545 | 8_1:+86772482 | Msa1222520:CDS |
CAGGTGCAAGGAAGATGCCT+GGG | 0.620065 | 8_1:+86774060 | Msa1222520:CDS |
GAACACAGCTGAGCATACAT+GGG | 0.622577 | 8_1:-86773127 | None:intergenic |
TCCCATCTGAAGAACCTGGT+GGG | 0.623707 | 8_1:+86773176 | Msa1222520:CDS |
AATTAAACGGATATTTCCAA+GGG | 0.624251 | 8_1:-86773347 | None:intergenic |
TTTAAGATCGGTATGCAGCA+AGG | 0.625743 | 8_1:+86769329 | Msa1222520:exon |
ACTGCGTTGCGTTACAAAGG+AGG | 0.627140 | 8_1:-86769090 | None:intergenic |
AAAGAGATCCTTAAGAAGGT+GGG | 0.628760 | 8_1:+86774755 | Msa1222520:CDS |
CTATCACCCAGAGGTTGTGA+AGG | 0.630046 | 8_1:+86774499 | Msa1222520:CDS |
CAAGAACCTGAACAATGTGA+TGG | 0.630524 | 8_1:-86773411 | None:intergenic |
ACCTTGAACACCAGTAACAC+GGG | 0.632162 | 8_1:-86773973 | None:intergenic |
TTAAACCTCCTGTACCAGGT+CGG | 0.636594 | 8_1:-86774025 | None:intergenic |
CCAGATAACCGTGACTGGCG+CGG | 0.637982 | 8_1:+86772104 | Msa1222520:CDS |
TGGTATTGATAATGATAACT+GGG | 0.639557 | 8_1:+86774088 | Msa1222520:CDS |
ACCAACCGAGGACTAACCAA+GGG | 0.640043 | 8_1:+86772225 | Msa1222520:CDS |
TCCTACTCTAGTCAAGGCTG+AGG | 0.642211 | 8_1:+86772474 | Msa1222520:CDS |
GGTTCTTCAGATGGGAATGG+AGG | 0.643262 | 8_1:-86773169 | None:intergenic |
ATTGCCCGACCTGGTACAGG+AGG | 0.644322 | 8_1:+86774020 | Msa1222520:CDS |
GTTCCCCTTCTGGCAGACCA+TGG | 0.644598 | 8_1:-86772499 | None:intergenic |
ATGTCTGGCGCTCAAACTGG+AGG | 0.645343 | 8_1:+86774146 | Msa1222520:CDS |
CTGTACCAGGTCGGGCAATG+GGG | 0.646604 | 8_1:-86774016 | None:intergenic |
GTACCATGGTCTGCCAGAAG+GGG | 0.649629 | 8_1:+86772496 | Msa1222520:CDS |
GCAACAGATTCAACGCGTGG+TGG | 0.651160 | 8_1:-86774551 | None:intergenic |
AAGGGGAACTCTCTCTGACA+AGG | 0.651357 | 8_1:+86772513 | Msa1222520:CDS |
CTCCTGCTAACGCAGATGAG+AGG | 0.656457 | 8_1:+86772141 | Msa1222520:CDS |
CAAGGTAACACAGGAGCCGG+GGG | 0.657493 | 8_1:+86773990 | Msa1222520:CDS |
ACCTCAGCCTTGACTAGAGT+AGG | 0.659993 | 8_1:-86772475 | None:intergenic |
GATAGTGGCCCATCCCTTAG+GGG | 0.661325 | 8_1:+86775187 | Msa1222520:three_prime_UTR |
ATAGTGGCCCATCCCTTAGG+GGG | 0.661786 | 8_1:+86775188 | Msa1222520:three_prime_UTR |
TTGGCAACAGATTCAACGCG+TGG | 0.665207 | 8_1:-86774554 | None:intergenic |
AATCAAAATTGATTCAGCGG+CGG | 0.669012 | 8_1:-86769254 | None:intergenic |
ACTGGTGTTCAAGGTAACAC+AGG | 0.671512 | 8_1:+86773981 | Msa1222520:CDS |
GACCAACCGAGGACTAACCA+AGG | 0.673065 | 8_1:+86772224 | Msa1222520:CDS |
TCGCTCTGTCTCCTGCTCAG+GGG | 0.679782 | 8_1:-86773293 | None:intergenic |
CGAACCATGAATTTCATCCG+TGG | 0.680504 | 8_1:-86773697 | None:intergenic |
GGTGTTTCTCATACCTGCGG+TGG | 0.680717 | 8_1:-86773952 | None:intergenic |
ACGGGTGTTTCTCATACCTG+CGG | 0.681983 | 8_1:-86773955 | None:intergenic |
CGAGGCATTACAGTGTGTGG+AGG | 0.682239 | 8_1:+86774460 | Msa1222520:CDS |
TTCCCATCTGAAGAACCTGG+TGG | 0.682791 | 8_1:+86773175 | Msa1222520:CDS |
CAAATCCTCAACTTGCACCA+CGG | 0.687448 | 8_1:+86773680 | Msa1222520:CDS |
AATTTGAAACTAGTGAAACA+AGG | 0.688672 | 8_1:-86774958 | None:intergenic |
TTAATCGTCAAGACCAACCG+AGG | 0.694458 | 8_1:+86772213 | Msa1222520:CDS |
ATAAGACCACTACTGCCTTG+AGG | 0.694537 | 8_1:-86774224 | None:intergenic |
AGTACCACCTCCAAGCACCA+GGG | 0.704734 | 8_1:-86774264 | None:intergenic |
AGGACTAGATCTATGCCAAG+AGG | 0.708044 | 8_1:+86774119 | Msa1222520:CDS |
GACTCTTGAGGAGACCCCTG+AGG | 0.713762 | 8_1:+86771656 | Msa1222520:intron |
GAGCTTTAAAATATCCTCAG+GGG | 0.715372 | 8_1:-86771670 | None:intergenic |
AACACAGCTGAGCATACATG+GGG | 0.719781 | 8_1:-86773126 | None:intergenic |
CCAACCGAGGACTAACCAAG+GGG | 0.742553 | 8_1:+86772226 | Msa1222520:CDS |
AGCACCGACCTATCACCCAG+AGG | 0.784365 | 8_1:+86774490 | Msa1222520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATTTTATATTTAATTTA+AGG | + | chr8_1:86769703-86769722 | Msa1222520:intron | 0.0% |
!!! | TATTAAATTTAATTTGAGTT+GGG | + | chr8_1:86770289-86770308 | Msa1222520:intron | 10.0% |
!!! | TAAATACAAATATTTTTTGT+CGG | - | chr8_1:86770545-86770564 | None:intergenic | 10.0% |
!!! | GATATATTTTTTTAGTATTT+CGG | + | chr8_1:86771053-86771072 | Msa1222520:intron | 10.0% |
!!! | AATATATTTTCAAATAAAAG+GGG | - | chr8_1:86773004-86773023 | None:intergenic | 10.0% |
!!! | GAAATATATTTTCAAATAAA+AGG | - | chr8_1:86773006-86773025 | None:intergenic | 10.0% |
!!! | TCAATTTTTTAATTAAAAGG+AGG | - | chr8_1:86769561-86769580 | None:intergenic | 15.0% |
!!! | CTATTAAATTTAATTTGAGT+TGG | + | chr8_1:86770288-86770307 | Msa1222520:intron | 15.0% |
!! | TATGGATTTAAATTATTTGT+CGG | - | chr8_1:86770325-86770344 | None:intergenic | 15.0% |
!!! | AAAAATTTTGTTTTTACGTT+TGG | + | chr8_1:86770482-86770501 | Msa1222520:intron | 15.0% |
!!! | AAAATTTTGTTTTTACGTTT+GGG | + | chr8_1:86770483-86770502 | Msa1222520:intron | 15.0% |
!!! | GATATATATTTTTGGTATTT+CGG | + | chr8_1:86770997-86771016 | Msa1222520:intron | 15.0% |
!!! | TCCTTTTCAAATTAATTATA+TGG | + | chr8_1:86771410-86771429 | Msa1222520:intron | 15.0% |
!!! | ACCATATAATTAATTTGAAA+AGG | - | chr8_1:86771414-86771433 | None:intergenic | 15.0% |
!!! | TAAACTAAATATTTTGACAA+TGG | - | chr8_1:86772016-86772035 | None:intergenic | 15.0% |
!!! | ATATATTTTCAAATAAAAGG+GGG | - | chr8_1:86773003-86773022 | None:intergenic | 15.0% |
!!! | ATTAATCAAAATTGATTCAG+CGG | - | chr8_1:86769260-86769279 | None:intergenic | 20.0% |
!! | GATTAATTCATTCATCTATT+CGG | + | chr8_1:86769273-86769292 | Msa1222520:five_prime_UTR | 20.0% |
!!! | ATAATTAAACCCCTTTTATT+TGG | + | chr8_1:86769520-86769539 | Msa1222520:intron | 20.0% |
!!! | TATATTTAATTTAAGGTGTG+AGG | + | chr8_1:86769710-86769729 | Msa1222520:intron | 20.0% |
!! | CTGATAAAAAAATTGTCTTT+AGG | + | chr8_1:86769740-86769759 | Msa1222520:intron | 20.0% |
!! | ATTACTATATTAAAGCATGA+AGG | + | chr8_1:86769891-86769910 | Msa1222520:intron | 20.0% |
!! | AAACAGTAAACAAAACATAA+AGG | - | chr8_1:86769955-86769974 | None:intergenic | 20.0% |
!!! | TTTATGTTTTGTTTACTGTT+TGG | + | chr8_1:86769954-86769973 | Msa1222520:intron | 20.0% |
!!! | TTATGTTTTGTTTACTGTTT+GGG | + | chr8_1:86769955-86769974 | Msa1222520:intron | 20.0% |
!! | TAAATCCATAGATTTGTAAA+TGG | + | chr8_1:86770335-86770354 | Msa1222520:intron | 20.0% |
!! | ATTAACCATTTACAAATCTA+TGG | - | chr8_1:86770343-86770362 | None:intergenic | 20.0% |
!! | ATAGATTTGTAAATGGTTAA+TGG | + | chr8_1:86770342-86770361 | Msa1222520:intron | 20.0% |
!!! | CTTCCTTTAAATTTAATTTG+AGG | + | chr8_1:86770440-86770459 | Msa1222520:intron | 20.0% |
!!! | CGTAAAAACAAAATTTTTGT+CGG | - | chr8_1:86770480-86770499 | None:intergenic | 20.0% |
!! | AAAATATTTGTATTTAAGCG+AGG | + | chr8_1:86770549-86770568 | Msa1222520:intron | 20.0% |
!!! | ATTTTGATGATTGTGTATTT+TGG | + | chr8_1:86770623-86770642 | Msa1222520:intron | 20.0% |
!!! | ATAAATGTTCTGTATACTTT+TGG | + | chr8_1:86771555-86771574 | Msa1222520:intron | 20.0% |
!!! | TAAATGTTCTGTATACTTTT+GGG | + | chr8_1:86771556-86771575 | Msa1222520:intron | 20.0% |
!!! | TTGATTAGTGTTGATTTATT+AGG | + | chr8_1:86771846-86771865 | Msa1222520:intron | 20.0% |
!! | AAATATCCAAGAAAATTACT+AGG | - | chr8_1:86772653-86772672 | None:intergenic | 20.0% |
!! | ATATTTATCAAGAACAGTTT+GGG | + | chr8_1:86772667-86772686 | Msa1222520:intron | 20.0% |
!!! | ATATTGACTTATGGTTATTA+TGG | - | chr8_1:86772714-86772733 | None:intergenic | 20.0% |
!!! | TATATTTTCAAATAAAAGGG+GGG | - | chr8_1:86773002-86773021 | None:intergenic | 20.0% |
!! | CATTTCATTGATATTTGATA+AGG | + | chr8_1:86773081-86773100 | Msa1222520:CDS | 20.0% |
!! | TTACAGTAAGAATATTAAAG+TGG | + | chr8_1:86775022-86775041 | Msa1222520:three_prime_UTR | 20.0% |
!! | CTAATGAAATACAAAACATT+TGG | - | chr8_1:86775215-86775234 | None:intergenic | 20.0% |
!! | AGAAAATCAGAAGAAAAAAA+TGG | - | chr8_1:86775241-86775260 | None:intergenic | 20.0% |
! | ACAAATCTTGTGTGAAATAA+GGG | + | chr8_1:86769055-86769074 | Msa1222520:five_prime_UTR | 25.0% |
! | AAAATTGAAGAAGAAGAAGA+AGG | - | chr8_1:86769198-86769217 | None:intergenic | 25.0% |
! | AAAAGCAGATCCAAATAAAA+GGG | - | chr8_1:86769533-86769552 | None:intergenic | 25.0% |
! | CAAAAAACAGCAATTTATTG+AGG | - | chr8_1:86769664-86769683 | None:intergenic | 25.0% |
!! | CACTGTGGTTTTTAATAATT+TGG | + | chr8_1:86769779-86769798 | Msa1222520:intron | 25.0% |
! | GAATTAAACAGAATATACGT+GGG | - | chr8_1:86770129-86770148 | None:intergenic | 25.0% |
! | TGAATTAAACAGAATATACG+TGG | - | chr8_1:86770130-86770149 | None:intergenic | 25.0% |
!!! | TAAATTTAATTTGAGTTGGG+AGG | + | chr8_1:86770292-86770311 | Msa1222520:intron | 25.0% |
! | GTGCCTCAAATTAAATTTAA+AGG | - | chr8_1:86770446-86770465 | None:intergenic | 25.0% |
!!! | TAAATTTAATTTGAGGCACA+AGG | + | chr8_1:86770447-86770466 | Msa1222520:intron | 25.0% |
!!! | TAAATTTAATTTGAGTTGCG+AGG | + | chr8_1:86770512-86770531 | Msa1222520:intron | 25.0% |
! | TTGACAACTTTATAAAAGCA+TGG | + | chr8_1:86770662-86770681 | Msa1222520:intron | 25.0% |
!!! | GATTTTAATGTCCTAATTCT+TGG | + | chr8_1:86770809-86770828 | Msa1222520:intron | 25.0% |
! | AAACTAAGTTCAATGTATGT+GGG | - | chr8_1:86770933-86770952 | None:intergenic | 25.0% |
! | AATGACATAAATTCTATGCA+CGG | - | chr8_1:86771182-86771201 | None:intergenic | 25.0% |
! | TTTGAATATGACTATGCTAT+GGG | + | chr8_1:86771258-86771277 | Msa1222520:intron | 25.0% |
!! | GATTTGTATCTAACTACTTT+TGG | + | chr8_1:86771280-86771299 | Msa1222520:intron | 25.0% |
! | GGAAAAAAACAGAATAATTG+GGG | - | chr8_1:86771481-86771500 | None:intergenic | 25.0% |
! | GGGAAAAAAACAGAATAATT+GGG | - | chr8_1:86771482-86771501 | None:intergenic | 25.0% |
! | TGGGAAAAAAACAGAATAAT+TGG | - | chr8_1:86771483-86771502 | None:intergenic | 25.0% |
! | TAATGAACAATAAGCTTCAT+GGG | - | chr8_1:86771502-86771521 | None:intergenic | 25.0% |
! | TTAATGAACAATAAGCTTCA+TGG | - | chr8_1:86771503-86771522 | None:intergenic | 25.0% |
! | GAAGCTTATTGTTCATTAAA+AGG | + | chr8_1:86771504-86771523 | Msa1222520:intron | 25.0% |
!!! | TTTTGTTTGCATGTATTTTG+TGG | + | chr8_1:86771612-86771631 | Msa1222520:intron | 25.0% |
!!! | TATTCTGTTAGCTTTGTAAA+AGG | + | chr8_1:86771781-86771800 | Msa1222520:intron | 25.0% |
! | ATTTAAAAGCTTCTACTTCA+AGG | - | chr8_1:86772360-86772379 | None:intergenic | 25.0% |
!! | AGTAGAAGCTTTTAAATAGA+TGG | + | chr8_1:86772363-86772382 | Msa1222520:intron | 25.0% |
! | TGTACAATAGATTGCTTATT+TGG | + | chr8_1:86772409-86772428 | Msa1222520:intron | 25.0% |
! | TAAATCTGTCTCATTAATTC+AGG | + | chr8_1:86772441-86772460 | Msa1222520:intron | 25.0% |
! | AAATCTGTCTCATTAATTCA+GGG | + | chr8_1:86772442-86772461 | Msa1222520:intron | 25.0% |
! | GATATTTATCAAGAACAGTT+TGG | + | chr8_1:86772666-86772685 | Msa1222520:intron | 25.0% |
! | TATTTATCAAGAACAGTTTG+GGG | + | chr8_1:86772668-86772687 | Msa1222520:intron | 25.0% |
! | GTTATTATGGAAATTGGATA+AGG | - | chr8_1:86772701-86772720 | None:intergenic | 25.0% |
! | CTTATGGTTATTATGGAAAT+TGG | - | chr8_1:86772707-86772726 | None:intergenic | 25.0% |
!! | ATATTTTCAAATAAAAGGGG+GGG | - | chr8_1:86773001-86773020 | None:intergenic | 25.0% |
! | AATTAAACGGATATTTCCAA+GGG | - | chr8_1:86773350-86773369 | None:intergenic | 25.0% |
! | ACTGTAATGTAATTTCTTGT+TGG | + | chr8_1:86773450-86773469 | Msa1222520:intron | 25.0% |
!! | AATGTAATTTCTTGTTGGTT+TGG | + | chr8_1:86773455-86773474 | Msa1222520:intron | 25.0% |
!!! | ATGTAATTTCTTGTTGGTTT+GGG | + | chr8_1:86773456-86773475 | Msa1222520:intron | 25.0% |
!! | AGTGTTGAAAAAATGACATA+TGG | - | chr8_1:86773581-86773600 | None:intergenic | 25.0% |
!!! | TGTCATTTTTTCAACACTAT+TGG | + | chr8_1:86773583-86773602 | Msa1222520:CDS | 25.0% |
! | CGTATAAATGATATGTACTT+TGG | + | chr8_1:86773637-86773656 | Msa1222520:CDS | 25.0% |
! | CATTATGTCTCAAAATTCAA+AGG | + | chr8_1:86773803-86773822 | Msa1222520:intron | 25.0% |
!!! | TGGTATTGATAATGATAACT+GGG | + | chr8_1:86774088-86774107 | Msa1222520:CDS | 25.0% |
!! | AATATTCAATTTTACAGCTG+GGG | - | chr8_1:86774378-86774397 | None:intergenic | 25.0% |
!! | CAATATTCAATTTTACAGCT+GGG | - | chr8_1:86774379-86774398 | None:intergenic | 25.0% |
!! | TCAATATTCAATTTTACAGC+TGG | - | chr8_1:86774380-86774399 | None:intergenic | 25.0% |
! | TGGAAGAATATTTCAATGTT+CGG | + | chr8_1:86774429-86774448 | Msa1222520:CDS | 25.0% |
! | AAACAGATACTCAATAAGAT+TGG | - | chr8_1:86774576-86774595 | None:intergenic | 25.0% |
! | ATTATCTCACCAAAGTTATT+TGG | - | chr8_1:86774692-86774711 | None:intergenic | 25.0% |
! | AATAACTTTGGTGAGATAAT+AGG | + | chr8_1:86774692-86774711 | Msa1222520:CDS | 25.0% |
! | ATAACTTTGGTGAGATAATA+GGG | + | chr8_1:86774693-86774712 | Msa1222520:CDS | 25.0% |
!!! | TATACTGATGTCTTTTTTAC+TGG | + | chr8_1:86774922-86774941 | Msa1222520:three_prime_UTR | 25.0% |
!! | AATTTGAAACTAGTGAAACA+AGG | - | chr8_1:86774961-86774980 | None:intergenic | 25.0% |
! | AAAGTTAAACCATAAAGCTA+AGG | + | chr8_1:86775120-86775139 | Msa1222520:three_prime_UTR | 25.0% |
!!! | AAACAAAATCCTTAGCTTTA+TGG | - | chr8_1:86775132-86775151 | None:intergenic | 25.0% |
CACAAATCTTGTGTGAAATA+AGG | + | chr8_1:86769054-86769073 | Msa1222520:five_prime_UTR | 30.0% | |
TTCTTCTCTTTCAATCGATT+CGG | + | chr8_1:86769229-86769248 | Msa1222520:five_prime_UTR | 30.0% | |
ATGAGAAAGATCAGATGAAA+AGG | - | chr8_1:86769456-86769475 | None:intergenic | 30.0% | |
TTAATTATACCTTGAAAGCG+AGG | - | chr8_1:86769508-86769527 | None:intergenic | 30.0% | |
AAAGCAGATCCAAATAAAAG+GGG | - | chr8_1:86769532-86769551 | None:intergenic | 30.0% | |
CAAAAGCAGATCCAAATAAA+AGG | - | chr8_1:86769534-86769553 | None:intergenic | 30.0% | |
AATTACACAATCATCAAACC+CGG | - | chr8_1:86769841-86769860 | None:intergenic | 30.0% | |
! | GGTTTGATGATTGTGTAATT+TGG | + | chr8_1:86769841-86769860 | Msa1222520:intron | 30.0% |
!! | ATGTGTACTTGCTGTAAATA+TGG | + | chr8_1:86770042-86770061 | Msa1222520:intron | 30.0% |
! | ATTTAAGACTCAATGTGTTG+TGG | + | chr8_1:86770255-86770274 | Msa1222520:intron | 30.0% |
ATCAGACACATTCAAATCAA+TGG | - | chr8_1:86770605-86770624 | None:intergenic | 30.0% | |
GTCTGTAAGTATATTTCAGT+TGG | - | chr8_1:86770707-86770726 | None:intergenic | 30.0% | |
TTTAATGTCCTAATTCTTGG+TGG | + | chr8_1:86770812-86770831 | Msa1222520:intron | 30.0% | |
TTAATGTCCTAATTCTTGGT+GGG | + | chr8_1:86770813-86770832 | Msa1222520:intron | 30.0% | |
GAAACTAAGTTCAATGTATG+TGG | - | chr8_1:86770934-86770953 | None:intergenic | 30.0% | |
ATGTGTGGTTAATCCATATA+TGG | + | chr8_1:86771135-86771154 | Msa1222520:intron | 30.0% | |
GTGAAAATCAAGTCCATATA+TGG | - | chr8_1:86771151-86771170 | None:intergenic | 30.0% | |
GAAAGAAAATGACTCAAAGT+TGG | - | chr8_1:86771210-86771229 | None:intergenic | 30.0% | |
!! | TTTGAGTCATTTTCTTTCTC+TGG | + | chr8_1:86771212-86771231 | Msa1222520:intron | 30.0% |
!! | TTGAGTCATTTTCTTTCTCT+GGG | + | chr8_1:86771213-86771232 | Msa1222520:intron | 30.0% |
GTTTGAATATGACTATGCTA+TGG | + | chr8_1:86771257-86771276 | Msa1222520:intron | 30.0% | |
!! | CTAACTACTTTTGGCATTAT+AGG | + | chr8_1:86771289-86771308 | Msa1222520:intron | 30.0% |
AGGTGAACAAAAACTCATTA+AGG | - | chr8_1:86771438-86771457 | None:intergenic | 30.0% | |
ATTGGGGAAGAATTGTAAAT+AGG | - | chr8_1:86771465-86771484 | None:intergenic | 30.0% | |
TTATCCATAGACTTAGACAA+CGG | - | chr8_1:86771539-86771558 | None:intergenic | 30.0% | |
!! | GTATACTTTTGGGTCATTTT+TGG | + | chr8_1:86771566-86771585 | Msa1222520:intron | 30.0% |
!! | TGAGCTTTAAAATATCCTCA+GGG | - | chr8_1:86771674-86771693 | None:intergenic | 30.0% |
! | GATATTGATGCTGAACTTTT+TGG | + | chr8_1:86771699-86771718 | Msa1222520:CDS | 30.0% |
!! | TTTTTGGTGAAGATCAAAGT+TGG | + | chr8_1:86771715-86771734 | Msa1222520:CDS | 30.0% |
! | TTTTGGTGAAGATCAAAGTT+GGG | + | chr8_1:86771716-86771735 | Msa1222520:CDS | 30.0% |
! | GTTTTTCATTCATTGCTGAA+AGG | - | chr8_1:86771910-86771929 | None:intergenic | 30.0% |
!!! | TATCGGTTTTGAATTTGAGT+TGG | - | chr8_1:86772077-86772096 | None:intergenic | 30.0% |
! | ATCAAGGAGAATAGAGATTT+TGG | + | chr8_1:86772176-86772195 | Msa1222520:CDS | 30.0% |
ATTACCCTTTAACAGTCTTT+AGG | - | chr8_1:86772546-86772565 | None:intergenic | 30.0% | |
AGAAAATTACTAGGCATGAA+CGG | - | chr8_1:86772644-86772663 | None:intergenic | 30.0% | |
! | TTCATGCCTAGTAATTTTCT+TGG | + | chr8_1:86772644-86772663 | Msa1222520:intron | 30.0% |
ATTTATCAAGAACAGTTTGG+GGG | + | chr8_1:86772669-86772688 | Msa1222520:intron | 30.0% | |
!! | AACTCGCAAATATTGACTTA+TGG | - | chr8_1:86772723-86772742 | None:intergenic | 30.0% |
ATAAGTCAATATTTGCGAGT+TGG | + | chr8_1:86772722-86772741 | Msa1222520:intron | 30.0% | |
AAAGTATAAACAGAGCTCAA+CGG | - | chr8_1:86772785-86772804 | None:intergenic | 30.0% | |
! | GCTCTGTTTATACTTTTCAT+TGG | + | chr8_1:86772789-86772808 | Msa1222520:intron | 30.0% |
TATCCTGCATTGAATTAGTT+AGG | - | chr8_1:86772891-86772910 | None:intergenic | 30.0% | |
! | TTCAGGAGATCAAATTTTTC+AGG | - | chr8_1:86772929-86772948 | None:intergenic | 30.0% |
GAAAAATTTGATCTCCTGAA+AGG | + | chr8_1:86772929-86772948 | Msa1222520:CDS | 30.0% | |
TGACATTCTTTGTAATTGCA+GGG | + | chr8_1:86773055-86773074 | Msa1222520:intron | 30.0% | |
CAATTAAACGGATATTTCCA+AGG | - | chr8_1:86773351-86773370 | None:intergenic | 30.0% | |
CTTGGAAATATCCGTTTAAT+TGG | + | chr8_1:86773349-86773368 | Msa1222520:CDS | 30.0% | |
ATAACATCAGTTAACCAAGA+AGG | - | chr8_1:86773497-86773516 | None:intergenic | 30.0% | |
! | CATTTATACGTCGTGATTTT+GGG | - | chr8_1:86773627-86773646 | None:intergenic | 30.0% |
! | TCATTTATACGTCGTGATTT+TGG | - | chr8_1:86773628-86773647 | None:intergenic | 30.0% |
TAAATGATATGTACTTTGGC+CGG | + | chr8_1:86773641-86773660 | Msa1222520:CDS | 30.0% | |
! | ATGAATTTCACTGATGGTTT+TGG | - | chr8_1:86773895-86773914 | None:intergenic | 30.0% |
CAGTTATCATTATCAATACC+AGG | - | chr8_1:86774089-86774108 | None:intergenic | 30.0% | |
!! | CTGGTATTGATAATGATAAC+TGG | + | chr8_1:86774087-86774106 | Msa1222520:CDS | 30.0% |
! | ATATTTCAATGTTCGGCTTT+TGG | + | chr8_1:86774436-86774455 | Msa1222520:CDS | 30.0% |
TTTATCTAGTCCAAGAGAAA+TGG | - | chr8_1:86774528-86774547 | None:intergenic | 30.0% | |
CAAAGTGAGCATAAAAAGAA+GGG | - | chr8_1:86774984-86775003 | None:intergenic | 30.0% | |
TCAAAGTGAGCATAAAAAGA+AGG | - | chr8_1:86774985-86775004 | None:intergenic | 30.0% | |
!!! | TAAGGATTTTGTTTTCCAGT+TGG | + | chr8_1:86775138-86775157 | Msa1222520:three_prime_UTR | 30.0% |
TGACAGAGTAATTGTTAAAC+TGG | + | chr8_1:86775261-86775280 | Msa1222520:three_prime_UTR | 30.0% | |
GGATATTTCTCTCTCTTCTA+CGG | - | chr8_1:86769133-86769152 | None:intergenic | 35.0% | |
AGCTAGGTTATTGTATCGAA+TGG | - | chr8_1:86769154-86769173 | None:intergenic | 35.0% | |
!! | AAGGATTGGATTGGATTTTG+AGG | - | chr8_1:86769179-86769198 | None:intergenic | 35.0% |
AAGAAGAAGAAGGATTGGAT+TGG | - | chr8_1:86769188-86769207 | None:intergenic | 35.0% | |
TGAAGAAGAAGAAGAAGGAT+TGG | - | chr8_1:86769193-86769212 | None:intergenic | 35.0% | |
! | AATCAAAATTGATTCAGCGG+CGG | - | chr8_1:86769257-86769276 | None:intergenic | 35.0% |
! | CTCTTTCAAGCGTTTAAGAT+CGG | + | chr8_1:86769317-86769336 | Msa1222520:five_prime_UTR | 35.0% |
! | ATCAAACAGTTCTTAGCTTG+AGG | + | chr8_1:86769354-86769373 | Msa1222520:CDS | 35.0% |
CCGGACATATTCAAATCTAT+GGG | - | chr8_1:86769822-86769841 | None:intergenic | 35.0% | |
CCCATAGATTTGAATATGTC+CGG | + | chr8_1:86769819-86769838 | Msa1222520:intron | 35.0% | |
CCATAGATTTGAATATGTCC+GGG | + | chr8_1:86769820-86769839 | Msa1222520:intron | 35.0% | |
TTACTGTTTGGGTACCTTTA+AGG | + | chr8_1:86769966-86769985 | Msa1222520:intron | 35.0% | |
ATCTAGAGGTCTTACCTTAA+AGG | - | chr8_1:86769983-86770002 | None:intergenic | 35.0% | |
AAGGTAAGACCTCTAGATAA+AGG | + | chr8_1:86769985-86770004 | Msa1222520:intron | 35.0% | |
GACATTAGACCTTTATCTAG+AGG | - | chr8_1:86769997-86770016 | None:intergenic | 35.0% | |
AGGTCTAATGTCCTAATTCT+TGG | + | chr8_1:86770005-86770024 | Msa1222520:intron | 35.0% | |
TCTAATGTCCTAATTCTTGG+TGG | + | chr8_1:86770008-86770027 | Msa1222520:intron | 35.0% | |
CTAATGTCCTAATTCTTGGT+GGG | + | chr8_1:86770009-86770028 | Msa1222520:intron | 35.0% | |
!! | TTAAGCGAGGCTTTATTATG+TGG | + | chr8_1:86770562-86770581 | Msa1222520:intron | 35.0% |
!! | ACGTGTACTTGCTGTAAATA+TGG | + | chr8_1:86770846-86770865 | Msa1222520:intron | 35.0% |
AATGTATGTGGGATCTTCAT+GGG | - | chr8_1:86770922-86770941 | None:intergenic | 35.0% | |
TGAACTTAGTTTCAGAATCC+TGG | + | chr8_1:86770941-86770960 | Msa1222520:intron | 35.0% | |
! | ATTTCATACCGATTACAGCT+TGG | + | chr8_1:86771109-86771128 | Msa1222520:intron | 35.0% |
!! | CTACTTTTGGCATTATAGGT+TGG | + | chr8_1:86771293-86771312 | Msa1222520:intron | 35.0% |
! | AGAGCTTTTACAGATTAGAG+AGG | + | chr8_1:86771361-86771380 | Msa1222520:CDS | 35.0% |
AAGAATTGTAAATAGGCAGC+AGG | - | chr8_1:86771458-86771477 | None:intergenic | 35.0% | |
! | TTTTTGGACCTCTTTTCTCT+AGG | + | chr8_1:86771582-86771601 | Msa1222520:intron | 35.0% |
! | TTTTGGACCTCTTTTCTCTA+GGG | + | chr8_1:86771583-86771602 | Msa1222520:intron | 35.0% |
!! | GAGCTTTAAAATATCCTCAG+GGG | - | chr8_1:86771673-86771692 | None:intergenic | 35.0% |
!! | CTGAGCTTTAAAATATCCTC+AGG | - | chr8_1:86771675-86771694 | None:intergenic | 35.0% |
TTTGGTGAAGATCAAAGTTG+GGG | + | chr8_1:86771717-86771736 | Msa1222520:CDS | 35.0% | |
!! | TGAATCATTTTTCATCCCGA+AGG | + | chr8_1:86771805-86771824 | Msa1222520:intron | 35.0% |
!! | GAATCATTTTTCATCCCGAA+GGG | + | chr8_1:86771806-86771825 | Msa1222520:intron | 35.0% |
TCAACAATCAACATACCCTT+CGG | - | chr8_1:86771824-86771843 | None:intergenic | 35.0% | |
!! | AGATTTTGGCAATACTAGTC+AGG | + | chr8_1:86772190-86772209 | Msa1222520:CDS | 35.0% |
TGCAAATGTTTATTACCCCT+TGG | - | chr8_1:86772244-86772263 | None:intergenic | 35.0% | |
GTGTCCTAAAGACTGTTAAA+GGG | + | chr8_1:86772539-86772558 | Msa1222520:CDS | 35.0% | |
TGAGACAGAACAAAGTCAAA+TGG | - | chr8_1:86772610-86772629 | None:intergenic | 35.0% | |
CACAAGTCTAAGAATTCTGA+AGG | - | chr8_1:86772848-86772867 | None:intergenic | 35.0% | |
AATCGATCAATTGACCTTTC+AGG | - | chr8_1:86772946-86772965 | None:intergenic | 35.0% | |
! | AAAGGTCAATTGATCGATTC+TGG | + | chr8_1:86772947-86772966 | Msa1222520:CDS | 35.0% |
TACATCAGCTGACATATTGA+AGG | + | chr8_1:86772973-86772992 | Msa1222520:CDS | 35.0% | |
CTGACATTCTTTGTAATTGC+AGG | + | chr8_1:86773054-86773073 | Msa1222520:intron | 35.0% | |
CTTGTTAAAATTCGTACCCT+TGG | + | chr8_1:86773331-86773350 | Msa1222520:CDS | 35.0% | |
!!! | ATGTGATGGACAATCTTTTC+AGG | - | chr8_1:86773400-86773419 | None:intergenic | 35.0% |
!! | TAATTTCTTGTTGGTTTGGG+AGG | + | chr8_1:86773459-86773478 | Msa1222520:intron | 35.0% |
GGTTAACTGATGTTATGAAC+AGG | + | chr8_1:86773501-86773520 | Msa1222520:intron | 35.0% | |
! | ATGTTATGAACAGGAGCTTT+TGG | + | chr8_1:86773510-86773529 | Msa1222520:intron | 35.0% |
! | TGTTATGAACAGGAGCTTTT+GGG | + | chr8_1:86773511-86773530 | Msa1222520:intron | 35.0% |
TTGTGCTCAATTCTTTCAAC+CGG | - | chr8_1:86773663-86773682 | None:intergenic | 35.0% | |
CTCTATCTGTATCTAGATCA+AGG | + | chr8_1:86773869-86773888 | Msa1222520:intron | 35.0% | |
CTCATCATGAATTTCACTGA+TGG | - | chr8_1:86773901-86773920 | None:intergenic | 35.0% | |
CATCAGTGAAATTCATGATG+AGG | + | chr8_1:86773899-86773918 | Msa1222520:CDS | 35.0% | |
GTAGCTGAAACAATGTTTGA+TGG | - | chr8_1:86774302-86774321 | None:intergenic | 35.0% | |
!! | TTTGTTATTTGCTTCTCTGC+TGG | + | chr8_1:86774637-86774656 | Msa1222520:CDS | 35.0% |
!! | CCAAAGTTATTTGGTGCTTT+AGG | - | chr8_1:86774683-86774702 | None:intergenic | 35.0% |
! | CCTAAAGCACCAAATAACTT+TGG | + | chr8_1:86774680-86774699 | Msa1222520:CDS | 35.0% |
!!! | ATAGGGAAACTAGTTTTGTC+CGG | + | chr8_1:86774710-86774729 | Msa1222520:CDS | 35.0% |
AAAGAGATCCTTAAGAAGGT+GGG | + | chr8_1:86774755-86774774 | Msa1222520:CDS | 35.0% | |
CAGAGTTGAATATTGCTTTC+TGG | - | chr8_1:86774793-86774812 | None:intergenic | 35.0% | |
AACTGATGAAAATACCTGAC+TGG | - | chr8_1:86775053-86775072 | None:intergenic | 35.0% | |
TGTCGTAGAGTTGTTTATTG+AGG | + | chr8_1:86775095-86775114 | Msa1222520:three_prime_UTR | 35.0% | |
GTCGTAGAGTTGTTTATTGA+GGG | + | chr8_1:86775096-86775115 | Msa1222520:three_prime_UTR | 35.0% | |
!!! | ATTGGATTTTGAGGCTAGCT+AGG | - | chr8_1:86769170-86769189 | None:intergenic | 40.0% |
! | TTTAAGATCGGTATGCAGCA+AGG | + | chr8_1:86769329-86769348 | Msa1222520:exon | 40.0% |
GAAGAGGAAGAATCGAATCT+AGG | - | chr8_1:86769413-86769432 | None:intergenic | 40.0% | |
AAAAGCAGGTGAATTGGAAG+AGG | - | chr8_1:86769429-86769448 | None:intergenic | 40.0% | |
! | TCTTCCAATTCACCTGCTTT+TGG | + | chr8_1:86769428-86769447 | Msa1222520:CDS | 40.0% |
GATGAAAAGGAACCAAAAGC+AGG | - | chr8_1:86769443-86769462 | None:intergenic | 40.0% | |
GTCAGTGTTTAATAGCACTG+TGG | + | chr8_1:86769764-86769783 | Msa1222520:intron | 40.0% | |
CCCGGACATATTCAAATCTA+TGG | - | chr8_1:86769823-86769842 | None:intergenic | 40.0% | |
TAAGTCTCCCACCAAGAATT+AGG | - | chr8_1:86770019-86770038 | None:intergenic | 40.0% | |
TATGGACAGAAAGCAATTCG+TGG | + | chr8_1:86770060-86770079 | Msa1222520:intron | 40.0% | |
ATGGACAGAAAGCAATTCGT+GGG | + | chr8_1:86770061-86770080 | Msa1222520:intron | 40.0% | |
GTTGTTAGACAGCAAACAGA+GGG | - | chr8_1:86770749-86770768 | None:intergenic | 40.0% | |
TAAGTGTCCCACCAAGAATT+AGG | - | chr8_1:86770823-86770842 | None:intergenic | 40.0% | |
TATGGACACAAAGCAATGTG+TGG | + | chr8_1:86770864-86770883 | Msa1222520:intron | 40.0% | |
ATGGACACAAAGCAATGTGT+GGG | + | chr8_1:86770865-86770884 | Msa1222520:intron | 40.0% | |
CAATGTATGTGGGATCTTCA+TGG | - | chr8_1:86770923-86770942 | None:intergenic | 40.0% | |
CACATAGACCAAGCTGTAAT+CGG | - | chr8_1:86771120-86771139 | None:intergenic | 40.0% | |
ATTACAGCTTGGTCTATGTG+TGG | + | chr8_1:86771120-86771139 | Msa1222520:intron | 40.0% | |
AAAGGAAAACACTAAGCAGC+AGG | - | chr8_1:86771396-86771415 | None:intergenic | 40.0% | |
ATAGACTTAGACAACGGCAT+GGG | - | chr8_1:86771533-86771552 | None:intergenic | 40.0% | |
! | CTTTTACTCACAGACTCTTG+AGG | + | chr8_1:86771644-86771663 | Msa1222520:intron | 40.0% |
CAACAATCAACATACCCTTC+GGG | - | chr8_1:86771823-86771842 | None:intergenic | 40.0% | |
CTAACAGTAGTATCTTGCTG+TGG | + | chr8_1:86771882-86771901 | Msa1222520:intron | 40.0% | |
!!! | CGGTTTTGAATTTGAGTTGG+AGG | - | chr8_1:86772074-86772093 | None:intergenic | 40.0% |
! | GGTTATCTGGTTCAGAGTAT+CGG | - | chr8_1:86772094-86772113 | None:intergenic | 40.0% |
GAGGTCTTGGGATAATATCA+AGG | + | chr8_1:86772160-86772179 | Msa1222520:CDS | 40.0% | |
CTCGCATTATTGAGAAACGA+AGG | + | chr8_1:86772320-86772339 | Msa1222520:intron | 40.0% | |
TCTGTCTCATTAATTCAGGG+AGG | + | chr8_1:86772445-86772464 | Msa1222520:intron | 40.0% | |
CGTGTCCTAAAGACTGTTAA+AGG | + | chr8_1:86772538-86772557 | Msa1222520:CDS | 40.0% | |
GCTCCTAACTAATTCAATGC+AGG | + | chr8_1:86772885-86772904 | Msa1222520:intron | 40.0% | |
!! | AAAGTTATTTCTCTCCCACC+AGG | - | chr8_1:86773193-86773212 | None:intergenic | 40.0% |
AGTACTCTTGAATAACTGCC+AGG | + | chr8_1:86773219-86773238 | Msa1222520:CDS | 40.0% | |
TCAGCAGCTCACCAATTAAA+CGG | - | chr8_1:86773363-86773382 | None:intergenic | 40.0% | |
TGAGCTGCTGAAGCAAAAAA+TGG | + | chr8_1:86773372-86773391 | Msa1222520:CDS | 40.0% | |
GATTGTCCATCACATTGTTC+AGG | + | chr8_1:86773405-86773424 | Msa1222520:CDS | 40.0% | |
CAAGAACCTGAACAATGTGA+TGG | - | chr8_1:86773414-86773433 | None:intergenic | 40.0% | |
! | GGAGTATTCACTTACCTTCT+TGG | + | chr8_1:86773480-86773499 | Msa1222520:intron | 40.0% |
! | AATTTTACCTCTTCACGTCG+TGG | - | chr8_1:86773757-86773776 | None:intergenic | 40.0% |
GATGAGGCAGAAAAGAATCT+TGG | + | chr8_1:86773915-86773934 | Msa1222520:CDS | 40.0% | |
TACCTTGAACACCAGTAACA+CGG | - | chr8_1:86773977-86773996 | None:intergenic | 40.0% | |
GCTTGGAAAGATAAGGAGAT+TGG | - | chr8_1:86774178-86774197 | None:intergenic | 40.0% | |
! | AGTAACTTCGAGTTTAGGAC+TGG | - | chr8_1:86774203-86774222 | None:intergenic | 40.0% |
!! | GCAGTAGTGGTCTTATAAGT+GGG | + | chr8_1:86774231-86774250 | Msa1222520:CDS | 40.0% |
! | ATGTTTGATGGTAGAGCAGA+AGG | - | chr8_1:86774290-86774309 | None:intergenic | 40.0% |
! | CCAAAAGAGAGACAGTTTTG+CGG | - | chr8_1:86774412-86774431 | None:intergenic | 40.0% |
ATTCTCACAGCTAGAGACAT+AGG | + | chr8_1:86774605-86774624 | Msa1222520:CDS | 40.0% | |
TTCTCACAGCTAGAGACATA+GGG | + | chr8_1:86774606-86774625 | Msa1222520:CDS | 40.0% | |
!!! | TAGGGAAACTAGTTTTGTCC+GGG | + | chr8_1:86774711-86774730 | Msa1222520:CDS | 40.0% |
GGTCAAAGAGATCCTTAAGA+AGG | + | chr8_1:86774751-86774770 | Msa1222520:CDS | 40.0% | |
CAAAGAGATCCTTAAGAAGG+TGG | + | chr8_1:86774754-86774773 | Msa1222520:CDS | 40.0% | |
AATATTCAACTCTGCAGTGC+AGG | + | chr8_1:86774799-86774818 | Msa1222520:CDS | 40.0% | |
TTCACAAGCATCTGACATTG+AGG | + | chr8_1:86774856-86774875 | Msa1222520:CDS | 40.0% | |
TGGCATATGATTTAGCCAAC+TGG | - | chr8_1:86775156-86775175 | None:intergenic | 40.0% | |
AAAACATTTGGACCCCCTAA+GGG | - | chr8_1:86775203-86775222 | None:intergenic | 40.0% | |
AGAACTGCGTTGCGTTACAA+AGG | - | chr8_1:86769096-86769115 | None:intergenic | 45.0% | |
GGAACCAAAAGCAGGTGAAT+TGG | - | chr8_1:86769435-86769454 | None:intergenic | 45.0% | |
AGAGAAGAAGCAGCAGCATT+AGG | - | chr8_1:86769485-86769504 | None:intergenic | 45.0% | |
TTCTTCTCTCCTCGCTTTCA+AGG | + | chr8_1:86769496-86769515 | Msa1222520:CDS | 45.0% | |
GAAAGCAATTCGTGGGCTTT+AGG | + | chr8_1:86770068-86770087 | Msa1222520:intron | 45.0% | |
GGTTGTTAGACAGCAAACAG+AGG | - | chr8_1:86770750-86770769 | None:intergenic | 45.0% | |
!! | CTGTTTGCTGTCTAACAACC+CGG | + | chr8_1:86770750-86770769 | Msa1222520:intron | 45.0% |
!! | TGTTTGCTGTCTAACAACCC+GGG | + | chr8_1:86770751-86770770 | Msa1222520:intron | 45.0% |
TGGGGTCTCAACTTAAATCC+CGG | - | chr8_1:86770772-86770791 | None:intergenic | 45.0% | |
AAGTTGAGACCCCATAAGAC+AGG | + | chr8_1:86770778-86770797 | Msa1222520:intron | 45.0% | |
AGTTGAGACCCCATAAGACA+GGG | + | chr8_1:86770779-86770798 | Msa1222520:intron | 45.0% | |
TCAAGCTTGCCCTGTCTTAT+GGG | - | chr8_1:86770791-86770810 | None:intergenic | 45.0% | |
ATCAAGCTTGCCCTGTCTTA+TGG | - | chr8_1:86770792-86770811 | None:intergenic | 45.0% | |
CAAAGCAATGTGTGGGCTTT+AGG | + | chr8_1:86770872-86770891 | Msa1222520:intron | 45.0% | |
AAGAAGTTGCAGCATCAACC+AGG | - | chr8_1:86770962-86770981 | None:intergenic | 45.0% | |
CTCTGGGTTGCATGTTTGAA+TGG | + | chr8_1:86771229-86771248 | Msa1222520:intron | 45.0% | |
TAGTATATCGCACACGCTCA+CGG | - | chr8_1:86771337-86771356 | None:intergenic | 45.0% | |
CATAGACTTAGACAACGGCA+TGG | - | chr8_1:86771534-86771553 | None:intergenic | 45.0% | |
CATGCCGTTGTCTAAGTCTA+TGG | + | chr8_1:86771532-86771551 | Msa1222520:intron | 45.0% | |
AGCAGTTCCCTAGAGAAAAG+AGG | - | chr8_1:86771593-86771612 | None:intergenic | 45.0% | |
TAACGCAGATGAGAGGTCTT+GGG | + | chr8_1:86772148-86772167 | Msa1222520:CDS | 45.0% | |
TTAATCGTCAAGACCAACCG+AGG | + | chr8_1:86772213-86772232 | Msa1222520:CDS | 45.0% | |
! | ATTACCCCTTGGTTAGTCCT+CGG | - | chr8_1:86772233-86772252 | None:intergenic | 45.0% |
ACTAGGCATGAACGGAAGTA+AGG | - | chr8_1:86772636-86772655 | None:intergenic | 45.0% | |
AACACAGCTGAGCATACATG+GGG | - | chr8_1:86773129-86773148 | None:intergenic | 45.0% | |
GAACACAGCTGAGCATACAT+GGG | - | chr8_1:86773130-86773149 | None:intergenic | 45.0% | |
AGAACACAGCTGAGCATACA+TGG | - | chr8_1:86773131-86773150 | None:intergenic | 45.0% | |
! | AACTGCCAGGAAGCTTTTGA+AGG | + | chr8_1:86773232-86773251 | Msa1222520:CDS | 45.0% |
TGGCAAACTGAGGGAAGAAT+TGG | + | chr8_1:86773258-86773277 | Msa1222520:CDS | 45.0% | |
! | CACATTGTTCAGGTTCTTGC+TGG | + | chr8_1:86773415-86773434 | Msa1222520:intron | 45.0% |
TTCTGACAGCAATGTGTGTC+CGG | + | chr8_1:86773537-86773556 | Msa1222520:CDS | 45.0% | |
! | GCTTCAACATTTTCCTCAGC+CGG | - | chr8_1:86773559-86773578 | None:intergenic | 45.0% |
CAAATCCTCAACTTGCACCA+CGG | + | chr8_1:86773680-86773699 | Msa1222520:CDS | 45.0% | |
TGCACCACGGATGAAATTCA+TGG | + | chr8_1:86773693-86773712 | Msa1222520:CDS | 45.0% | |
CGAACCATGAATTTCATCCG+TGG | - | chr8_1:86773700-86773719 | None:intergenic | 45.0% | |
TAGATTTGCGTGCTAGCAAC+TGG | + | chr8_1:86773728-86773747 | Msa1222520:CDS | 45.0% | |
AGATTTGCGTGCTAGCAACT+GGG | + | chr8_1:86773729-86773748 | Msa1222520:CDS | 45.0% | |
AAGAATCTTGGATTGCGTCC+AGG | + | chr8_1:86773927-86773946 | Msa1222520:CDS | 45.0% | |
ATGAGAAACACCCGTGTTAC+TGG | + | chr8_1:86773963-86773982 | Msa1222520:CDS | 45.0% | |
ACCTTGAACACCAGTAACAC+GGG | - | chr8_1:86773976-86773995 | None:intergenic | 45.0% | |
ACTGGTGTTCAAGGTAACAC+AGG | + | chr8_1:86773981-86774000 | Msa1222520:CDS | 45.0% | |
TTAAACCTCCTGTACCAGGT+CGG | - | chr8_1:86774028-86774047 | None:intergenic | 45.0% | |
GTACAGGAGGTTTAATGCCT+GGG | + | chr8_1:86774033-86774052 | Msa1222520:CDS | 45.0% | |
TTATCAATACCAGGCATCCC+AGG | - | chr8_1:86774080-86774099 | None:intergenic | 45.0% | |
!! | ATGATAACTGGGAAGTGCCT+AGG | + | chr8_1:86774099-86774118 | Msa1222520:CDS | 45.0% |
CTTGGCATAGATCTAGTCCT+AGG | - | chr8_1:86774119-86774138 | None:intergenic | 45.0% | |
AGGACTAGATCTATGCCAAG+AGG | + | chr8_1:86774119-86774138 | Msa1222520:CDS | 45.0% | |
! | ACTGGTGGCTTGGAAAGATA+AGG | - | chr8_1:86774185-86774204 | None:intergenic | 45.0% |
! | AACTTCGAGTTTAGGACTGG+TGG | - | chr8_1:86774200-86774219 | None:intergenic | 45.0% |
! | GAGGCAGTAACTTCGAGTTT+AGG | - | chr8_1:86774208-86774227 | None:intergenic | 45.0% |
AACTCGAAGTTACTGCCTCA+AGG | + | chr8_1:86774209-86774228 | Msa1222520:CDS | 45.0% | |
ATAAGACCACTACTGCCTTG+AGG | - | chr8_1:86774227-86774246 | None:intergenic | 45.0% | |
!! | GGCAGTAGTGGTCTTATAAG+TGG | + | chr8_1:86774230-86774249 | Msa1222520:CDS | 45.0% |
! | CCGCAAAACTGTCTCTCTTT+TGG | + | chr8_1:86774409-86774428 | Msa1222520:CDS | 45.0% |
GTGAAGGAAGCCATTTCTCT+TGG | + | chr8_1:86774515-86774534 | Msa1222520:CDS | 45.0% | |
GCTTCTCTGCTGGATGATAT+TGG | + | chr8_1:86774647-86774666 | Msa1222520:CDS | 45.0% | |
!!! | AGGGAAACTAGTTTTGTCCG+GGG | + | chr8_1:86774712-86774731 | Msa1222520:CDS | 45.0% |
!! | CAGGTAATTAGCTCTGCATC+CGG | + | chr8_1:86774818-86774837 | Msa1222520:CDS | 45.0% |
!! | AGGTAATTAGCTCTGCATCC+GGG | + | chr8_1:86774819-86774838 | Msa1222520:CDS | 45.0% |
TGAATCCAATACAGCTTGCC+CGG | - | chr8_1:86774840-86774859 | None:intergenic | 45.0% | |
TTAAAGTGGAGCTTCCAGTC+AGG | + | chr8_1:86775036-86775055 | Msa1222520:three_prime_UTR | 45.0% | |
GCCAAGTTTCTCCAAGATAG+TGG | + | chr8_1:86775172-86775191 | Msa1222520:three_prime_UTR | 45.0% | |
GCCACTATCTTGGAGAAACT+TGG | - | chr8_1:86775176-86775195 | None:intergenic | 45.0% | |
CAAAACATTTGGACCCCCTA+AGG | - | chr8_1:86775204-86775223 | None:intergenic | 45.0% | |
!!! | AAATCAATTTTTTAATTAAA+AGG | - | chr8_1:86769564-86769583 | None:intergenic | 5.0% |
!!! | TAATATTTGATATATATTTT+TGG | + | chr8_1:86770989-86771008 | Msa1222520:intron | 5.0% |
!!! | AAATATATTTTCAAATAAAA+GGG | - | chr8_1:86773005-86773024 | None:intergenic | 5.0% |
TGCGTTGCGTTACAAAGGAG+GGG | - | chr8_1:86769091-86769110 | None:intergenic | 50.0% | |
CTGCGTTGCGTTACAAAGGA+GGG | - | chr8_1:86769092-86769111 | None:intergenic | 50.0% | |
ACTGCGTTGCGTTACAAAGG+AGG | - | chr8_1:86769093-86769112 | None:intergenic | 50.0% | |
! | ACAGTTCTTAGCTTGAGGCC+TGG | + | chr8_1:86769359-86769378 | Msa1222520:CDS | 50.0% |
!! | AGCAATTCGTGGGCTTTAGG+TGG | + | chr8_1:86770071-86770090 | Msa1222520:intron | 50.0% |
!! | GCAATTCGTGGGCTTTAGGT+GGG | + | chr8_1:86770072-86770091 | Msa1222520:intron | 50.0% |
GGGGTCTCAACTTAAATCCC+GGG | - | chr8_1:86770771-86770790 | None:intergenic | 50.0% | |
CAAGCTTGCCCTGTCTTATG+GGG | - | chr8_1:86770790-86770809 | None:intergenic | 50.0% | |
!! | AGCAATGTGTGGGCTTTAGG+TGG | + | chr8_1:86770875-86770894 | Msa1222520:intron | 50.0% |
!! | GCAATGTGTGGGCTTTAGGT+GGG | + | chr8_1:86770876-86770895 | Msa1222520:intron | 50.0% |
CTGAACCAGATAACCGTGAC+TGG | + | chr8_1:86772099-86772118 | Msa1222520:CDS | 50.0% | |
TAGCAGGAGGTTGTGCAGAA+CGG | - | chr8_1:86772130-86772149 | None:intergenic | 50.0% | |
CTAACGCAGATGAGAGGTCT+TGG | + | chr8_1:86772147-86772166 | Msa1222520:CDS | 50.0% | |
ACCAACCGAGGACTAACCAA+GGG | + | chr8_1:86772225-86772244 | Msa1222520:CDS | 50.0% | |
ACCTGCTCCTACTCTAGTCA+AGG | + | chr8_1:86772468-86772487 | Msa1222520:CDS | 50.0% | |
TCCTACTCTAGTCAAGGCTG+AGG | + | chr8_1:86772474-86772493 | Msa1222520:CDS | 50.0% | |
ACCTCAGCCTTGACTAGAGT+AGG | - | chr8_1:86772478-86772497 | None:intergenic | 50.0% | |
! | TAGTCAAGGCTGAGGTACCA+TGG | + | chr8_1:86772482-86772501 | Msa1222520:CDS | 50.0% |
AAGGGGAACTCTCTCTGACA+AGG | + | chr8_1:86772513-86772532 | Msa1222520:CDS | 50.0% | |
GCATACATGGGGCAGAATGT+TGG | - | chr8_1:86773118-86773137 | None:intergenic | 50.0% | |
GGTTCTTCAGATGGGAATGG+AGG | - | chr8_1:86773172-86773191 | None:intergenic | 50.0% | |
CCAGGTTCTTCAGATGGGAA+TGG | - | chr8_1:86773175-86773194 | None:intergenic | 50.0% | |
CCATTCCCATCTGAAGAACC+TGG | + | chr8_1:86773172-86773191 | Msa1222520:CDS | 50.0% | |
TTCCCATCTGAAGAACCTGG+TGG | + | chr8_1:86773175-86773194 | Msa1222520:CDS | 50.0% | |
TCCCATCTGAAGAACCTGGT+GGG | + | chr8_1:86773176-86773195 | Msa1222520:CDS | 50.0% | |
TCCCACCAGGTTCTTCAGAT+GGG | - | chr8_1:86773180-86773199 | None:intergenic | 50.0% | |
CAGCACCTTCAAAAGCTTCC+TGG | - | chr8_1:86773240-86773259 | None:intergenic | 50.0% | |
!! | CAGGAAGCTTTTGAAGGTGC+TGG | + | chr8_1:86773238-86773257 | Msa1222520:CDS | 50.0% |
!! | TTGAAGGTGCTGGCAAACTG+AGG | + | chr8_1:86773248-86773267 | Msa1222520:CDS | 50.0% |
!! | TGAAGGTGCTGGCAAACTGA+GGG | + | chr8_1:86773249-86773268 | Msa1222520:CDS | 50.0% |
TTCATCCGTGGTGCAAGTTG+AGG | - | chr8_1:86773688-86773707 | None:intergenic | 50.0% | |
ACGGGTGTTTCTCATACCTG+CGG | - | chr8_1:86773958-86773977 | None:intergenic | 50.0% | |
! | ACCCGTGTTACTGGTGTTCA+AGG | + | chr8_1:86773972-86773991 | Msa1222520:CDS | 50.0% |
GTTCAAGGTAACACAGGAGC+CGG | + | chr8_1:86773987-86774006 | Msa1222520:CDS | 50.0% | |
TTCAAGGTAACACAGGAGCC+GGG | + | chr8_1:86773988-86774007 | Msa1222520:CDS | 50.0% | |
TAAACCTCCTGTACCAGGTC+GGG | - | chr8_1:86774027-86774046 | None:intergenic | 50.0% | |
GGCATTAAACCTCCTGTACC+AGG | - | chr8_1:86774032-86774051 | None:intergenic | 50.0% | |
GGTACAGGAGGTTTAATGCC+TGG | + | chr8_1:86774032-86774051 | Msa1222520:CDS | 50.0% | |
ATGCCAAGAGGAGACATGTC+TGG | + | chr8_1:86774131-86774150 | Msa1222520:CDS | 50.0% | |
TTACTGCCTCAAGGCAGTAG+TGG | + | chr8_1:86774218-86774237 | Msa1222520:CDS | 50.0% | |
AAGTGGGAAGAATAGTGCCC+TGG | + | chr8_1:86774247-86774266 | Msa1222520:CDS | 50.0% | |
AAGAATAGTGCCCTGGTGCT+TGG | + | chr8_1:86774254-86774273 | Msa1222520:CDS | 50.0% | |
GAAACAGGTTTGACAGGTGC+AGG | - | chr8_1:86774329-86774348 | None:intergenic | 50.0% | |
! | AATTTTACAGCTGGGGCCTG+TGG | - | chr8_1:86774371-86774390 | None:intergenic | 50.0% |
! | CAATGTTCGGCTTTTGGACG+AGG | + | chr8_1:86774442-86774461 | Msa1222520:CDS | 50.0% |
ACAACCTCTGGGTGATAGGT+CGG | - | chr8_1:86774497-86774516 | None:intergenic | 50.0% | |
CTTCACAACCTCTGGGTGAT+AGG | - | chr8_1:86774501-86774520 | None:intergenic | 50.0% | |
CTATCACCCAGAGGTTGTGA+AGG | + | chr8_1:86774499-86774518 | Msa1222520:CDS | 50.0% | |
TGGCTTCCTTCACAACCTCT+GGG | - | chr8_1:86774508-86774527 | None:intergenic | 50.0% | |
ATGGCTTCCTTCACAACCTC+TGG | - | chr8_1:86774509-86774528 | None:intergenic | 50.0% | |
TTGGCAACAGATTCAACGCG+TGG | - | chr8_1:86774557-86774576 | None:intergenic | 50.0% | |
ACAGCTAGAGACATAGGGAC+TGG | + | chr8_1:86774611-86774630 | Msa1222520:CDS | 50.0% | |
!!! | GGGAAACTAGTTTTGTCCGG+GGG | + | chr8_1:86774713-86774732 | Msa1222520:CDS | 50.0% |
!!! | ACTAGTTTTGTCCGGGGGTT+TGG | + | chr8_1:86774718-86774737 | Msa1222520:CDS | 50.0% |
CACCTTAAAGTCCAAACCCC+CGG | - | chr8_1:86774732-86774751 | None:intergenic | 50.0% | |
AGTCGTCACCCACCTTCTTA+AGG | - | chr8_1:86774766-86774785 | None:intergenic | 50.0% | |
CGATTCACTCAAACAGAGCC+TGG | - | chr8_1:86774886-86774905 | None:intergenic | 50.0% | |
TAAGGGATGGGCCACTATCT+TGG | - | chr8_1:86775186-86775205 | None:intergenic | 50.0% | |
! | AAGATAGTGGCCCATCCCTT+AGG | + | chr8_1:86775185-86775204 | Msa1222520:three_prime_UTR | 50.0% |
! | AGATAGTGGCCCATCCCTTA+GGG | + | chr8_1:86775186-86775205 | Msa1222520:three_prime_UTR | 50.0% |
ATTTGGACCCCCTAAGGGAT+GGG | - | chr8_1:86775198-86775217 | None:intergenic | 50.0% | |
! | GTTCTTAGCTTGAGGCCTGG+TGG | + | chr8_1:86769362-86769381 | Msa1222520:CDS | 55.0% |
GCATGGCGATAACGCTTCAG+AGG | + | chr8_1:86770679-86770698 | Msa1222520:intron | 55.0% | |
GACTTAGACAACGGCATGGG+TGG | - | chr8_1:86771530-86771549 | None:intergenic | 55.0% | |
CTCTCATCTGCGTTAGCAGG+AGG | - | chr8_1:86772143-86772162 | None:intergenic | 55.0% | |
CTCCTGCTAACGCAGATGAG+AGG | + | chr8_1:86772141-86772160 | Msa1222520:CDS | 55.0% | |
GACCTCTCATCTGCGTTAGC+AGG | - | chr8_1:86772146-86772165 | None:intergenic | 55.0% | |
GACCAACCGAGGACTAACCA+AGG | + | chr8_1:86772224-86772243 | Msa1222520:CDS | 55.0% | |
CCAACCGAGGACTAACCAAG+GGG | + | chr8_1:86772226-86772245 | Msa1222520:CDS | 55.0% | |
GCCTTGACTAGAGTAGGAGC+AGG | - | chr8_1:86772472-86772491 | None:intergenic | 55.0% | |
AGGTACCATGGTCTGCCAGA+AGG | + | chr8_1:86772494-86772513 | Msa1222520:CDS | 55.0% | |
GGTACCATGGTCTGCCAGAA+GGG | + | chr8_1:86772495-86772514 | Msa1222520:CDS | 55.0% | |
GTACCATGGTCTGCCAGAAG+GGG | + | chr8_1:86772496-86772515 | Msa1222520:CDS | 55.0% | |
GTCAGAGAGAGTTCCCCTTC+TGG | - | chr8_1:86772512-86772531 | None:intergenic | 55.0% | |
CTCCCACCAGGTTCTTCAGA+TGG | - | chr8_1:86773181-86773200 | None:intergenic | 55.0% | |
GGTGTTTCTCATACCTGCGG+TGG | - | chr8_1:86773955-86773974 | None:intergenic | 55.0% | |
TCAAGGTAACACAGGAGCCG+GGG | + | chr8_1:86773989-86774008 | Msa1222520:CDS | 55.0% | |
GGTTTAATGCCTGGGATGCC+AGG | + | chr8_1:86774041-86774060 | Msa1222520:CDS | 55.0% | |
CAGGTGCAAGGAAGATGCCT+GGG | + | chr8_1:86774060-86774079 | Msa1222520:CDS | 55.0% | |
GACATGTCTGGCGCTCAAAC+TGG | + | chr8_1:86774143-86774162 | Msa1222520:CDS | 55.0% | |
ATGTCTGGCGCTCAAACTGG+AGG | + | chr8_1:86774146-86774165 | Msa1222520:CDS | 55.0% | |
! | CGAGTTTAGGACTGGTGGCT+TGG | - | chr8_1:86774195-86774214 | None:intergenic | 55.0% |
AATAGTGCCCTGGTGCTTGG+AGG | + | chr8_1:86774257-86774276 | Msa1222520:CDS | 55.0% | |
AGTACCACCTCCAAGCACCA+GGG | - | chr8_1:86774267-86774286 | None:intergenic | 55.0% | |
GCGGCAGAAACAGGTTTGAC+AGG | - | chr8_1:86774335-86774354 | None:intergenic | 55.0% | |
TCAGAGGATGCGGCAGAAAC+AGG | - | chr8_1:86774344-86774363 | None:intergenic | 55.0% | |
CTGTGGCTTCTCAGAGGATG+CGG | - | chr8_1:86774354-86774373 | None:intergenic | 55.0% | |
! | GGACGAGGCATTACAGTGTG+TGG | + | chr8_1:86774457-86774476 | Msa1222520:CDS | 55.0% |
! | CGAGGCATTACAGTGTGTGG+AGG | + | chr8_1:86774460-86774479 | Msa1222520:CDS | 55.0% |
GCAACAGATTCAACGCGTGG+TGG | - | chr8_1:86774554-86774573 | None:intergenic | 55.0% | |
GTCCGGGGGTTTGGACTTTA+AGG | + | chr8_1:86774727-86774746 | Msa1222520:CDS | 55.0% | |
! | CGGGGGTTTGGACTTTAAGG+TGG | + | chr8_1:86774730-86774749 | Msa1222520:CDS | 55.0% |
TGCATCCGGGCAAGCTGTAT+TGG | + | chr8_1:86774832-86774851 | Msa1222520:CDS | 55.0% | |
ATCTGACATTGAGGCCTGCC+AGG | + | chr8_1:86774865-86774884 | Msa1222520:CDS | 55.0% | |
TCACTCAAACAGAGCCTGGC+AGG | - | chr8_1:86774882-86774901 | None:intergenic | 55.0% | |
! | GATAGTGGCCCATCCCTTAG+GGG | + | chr8_1:86775187-86775206 | Msa1222520:three_prime_UTR | 55.0% |
ATAGTGGCCCATCCCTTAGG+GGG | + | chr8_1:86775188-86775207 | Msa1222520:three_prime_UTR | 55.0% | |
CATTTGGACCCCCTAAGGGA+TGG | - | chr8_1:86775199-86775218 | None:intergenic | 55.0% | |
! | CTTAGCTTGAGGCCTGGTGG+TGG | + | chr8_1:86769365-86769384 | Msa1222520:CDS | 60.0% |
CTGTTTCCTCGACCACCACC+AGG | - | chr8_1:86769380-86769399 | None:intergenic | 60.0% | |
!! | CTGGTGGTGGTCGAGGAAAC+AGG | + | chr8_1:86769378-86769397 | Msa1222520:CDS | 60.0% |
GACTCTTGAGGAGACCCCTG+AGG | + | chr8_1:86771656-86771675 | Msa1222520:intron | 60.0% | |
CCAGATAACCGTGACTGGCG+CGG | + | chr8_1:86772104-86772123 | Msa1222520:CDS | 60.0% | |
! | CCCCTTGGTTAGTCCTCGGT+TGG | - | chr8_1:86772229-86772248 | None:intergenic | 60.0% |
GTTCCCCTTCTGGCAGACCA+TGG | - | chr8_1:86772502-86772521 | None:intergenic | 60.0% | |
GCAGATGACTTCCCCTGAGC+AGG | + | chr8_1:86773282-86773301 | Msa1222520:CDS | 60.0% | |
TCGCTCTGTCTCCTGCTCAG+GGG | - | chr8_1:86773296-86773315 | None:intergenic | 60.0% | |
GTCGCTCTGTCTCCTGCTCA+GGG | - | chr8_1:86773297-86773316 | None:intergenic | 60.0% | |
CAGCAATGTGTGTCCGGCTG+AGG | + | chr8_1:86773543-86773562 | Msa1222520:CDS | 60.0% | |
CTGGGTTCCACGACGTGAAG+AGG | + | chr8_1:86773747-86773766 | Msa1222520:CDS | 60.0% | |
CAAGGTAACACAGGAGCCGG+GGG | + | chr8_1:86773990-86774009 | Msa1222520:CDS | 60.0% | |
CTGTACCAGGTCGGGCAATG+GGG | - | chr8_1:86774019-86774038 | None:intergenic | 60.0% | |
CCTGTACCAGGTCGGGCAAT+GGG | - | chr8_1:86774020-86774039 | None:intergenic | 60.0% | |
TCCTGTACCAGGTCGGGCAA+TGG | - | chr8_1:86774021-86774040 | None:intergenic | 60.0% | |
ATTGCCCGACCTGGTACAGG+AGG | + | chr8_1:86774020-86774039 | Msa1222520:CDS | 60.0% | |
TTCCTTGCACCTGGCATCCC+AGG | - | chr8_1:86774053-86774072 | None:intergenic | 60.0% | |
CCAGGCATCTTCCTTGCACC+TGG | - | chr8_1:86774062-86774081 | None:intergenic | 60.0% | |
CCAGGTGCAAGGAAGATGCC+TGG | + | chr8_1:86774059-86774078 | Msa1222520:CDS | 60.0% | |
AGGAAGATGCCTGGGATGCC+TGG | + | chr8_1:86774068-86774087 | Msa1222520:CDS | 60.0% | |
GCGCCAGACATGTCTCCTCT+TGG | - | chr8_1:86774137-86774156 | None:intergenic | 60.0% | |
GAGTACCACCTCCAAGCACC+AGG | - | chr8_1:86774268-86774287 | None:intergenic | 60.0% | |
! | CGCATCCTCTGAGAAGCCAC+AGG | + | chr8_1:86774352-86774371 | Msa1222520:CDS | 60.0% |
!! | AGCACCGACCTATCACCCAG+AGG | + | chr8_1:86774490-86774509 | Msa1222520:CDS | 60.0% |
!! | TTGAGGCCTGGTGGTGGTCG+AGG | + | chr8_1:86769371-86769390 | Msa1222520:CDS | 65.0% |
CCGCGCCAGTCACGGTTATC+TGG | - | chr8_1:86772107-86772126 | None:intergenic | 65.0% | |
CGTCGCTCTGTCTCCTGCTC+AGG | - | chr8_1:86773298-86773317 | None:intergenic | 65.0% | |
GGAGACAGAGCGACGCGACA+AGG | + | chr8_1:86773303-86773322 | Msa1222520:CDS | 65.0% | |
CTCATACCTGCGGTGGCACC+TGG | - | chr8_1:86773948-86773967 | None:intergenic | 65.0% | |
CCCATTGCCCGACCTGGTAC+AGG | + | chr8_1:86774017-86774036 | Msa1222520:CDS | 65.0% | |
TGCCTGGGATGCCAGGTGCA+AGG | + | chr8_1:86774048-86774067 | Msa1222520:CDS | 65.0% | |
AGTGCCCTGGTGCTTGGAGG+TGG | + | chr8_1:86774260-86774279 | Msa1222520:CDS | 65.0% | |
TGGGGCCTGTGGCTTCTCAG+AGG | - | chr8_1:86774360-86774379 | None:intergenic | 65.0% | |
CAGAACGGCCGCGCCAGTCA+CGG | - | chr8_1:86772115-86772134 | None:intergenic | 70.0% | |
! | TTGCGTCCAGGTGCCACCGC+AGG | + | chr8_1:86773939-86773958 | Msa1222520:CDS | 70.0% |
TCGGGCAATGGGGAAGCCCC+CGG | - | chr8_1:86774009-86774028 | None:intergenic | 70.0% | |
GGCTTCCCCATTGCCCGACC+TGG | + | chr8_1:86774011-86774030 | Msa1222520:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 86769041 | 86775320 | 86769041 | ID=Msa1222520;Name=Msa1222520 |
chr8_1 | mRNA | 86769041 | 86775320 | 86769041 | ID=Msa1222520-mRNA-1;Parent=Msa1222520;Name=Msa1222520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=300|1|1|1|1|1|9|419|774 |
chr8_1 | exon | 86769041 | 86769517 | 86769041 | ID=Msa1222520-mRNA-1:exon:31203;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86771311 | 86771382 | 86771311 | ID=Msa1222520-mRNA-1:exon:31204;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86771657 | 86771755 | 86771657 | ID=Msa1222520-mRNA-1:exon:31205;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86772071 | 86772247 | 86772071 | ID=Msa1222520-mRNA-1:exon:31206;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86772463 | 86772560 | 86772463 | ID=Msa1222520-mRNA-1:exon:31207;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86772907 | 86772994 | 86772907 | ID=Msa1222520-mRNA-1:exon:31208;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86773076 | 86773426 | 86773076 | ID=Msa1222520-mRNA-1:exon:31209;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86773523 | 86773768 | 86773523 | ID=Msa1222520-mRNA-1:exon:31210;Parent=Msa1222520-mRNA-1 |
chr8_1 | exon | 86773885 | 86775320 | 86773885 | ID=Msa1222520-mRNA-1:exon:31211;Parent=Msa1222520-mRNA-1 |
chr8_1 | five_prime_UTR | 86769041 | 86769340 | 86769041 | ID=Msa1222520-mRNA-1:five_prime_utr;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86769341 | 86769517 | 86769341 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86771311 | 86771382 | 86771311 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86771657 | 86771755 | 86771657 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86772071 | 86772247 | 86772071 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86772463 | 86772560 | 86772463 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86772907 | 86772994 | 86772907 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86773076 | 86773426 | 86773076 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86773523 | 86773768 | 86773523 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | CDS | 86773885 | 86774901 | 86773885 | ID=Msa1222520-mRNA-1:cds;Parent=Msa1222520-mRNA-1 |
chr8_1 | three_prime_UTR | 86774902 | 86775320 | 86774902 | ID=Msa1222520-mRNA-1:three_prime_utr;Parent=Msa1222520-mRNA-1 |
Gene Sequence |
Protein sequence |