Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378600 | XP_003608875.1 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378600 | sp|P34922|G3PC_PEA | 97.923 | 337 | 7 | 0 | 3 | 339 | 2 | 338 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378600 | G7JML2 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0482150 | Msa1378600 | 0.999373 | 1.155474e-306 | -8.615850e-47 |
| Msa1208650 | Msa1378600 | 0.892327 | 1.759053e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378600 | MtrunA17_Chr4g0057861 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Msa1378600 | MtrunA17_Chr6g0458861 | 85.586 | 333 | 48 | 0 | 4 | 336 | 2 | 334 | 0.0 | 590 |
| Msa1378600 | MtrunA17_Chr3g0122971 | 84.639 | 332 | 30 | 1 | 5 | 336 | 6 | 316 | 0.0 | 573 |
| Msa1378600 | MtrunA17_Chr2g0310421 | 71.386 | 332 | 94 | 1 | 5 | 336 | 82 | 412 | 7.72e-175 | 491 |
| Msa1378600 | MtrunA17_Chr8g0357071 | 81.673 | 251 | 32 | 4 | 86 | 324 | 59 | 307 | 1.26e-137 | 393 |
| Msa1378600 | MtrunA17_Chr3g0144151 | 48.680 | 341 | 166 | 7 | 4 | 338 | 84 | 421 | 3.33e-89 | 275 |
| Msa1378600 | MtrunA17_Chr8g0360951 | 87.838 | 148 | 9 | 2 | 179 | 326 | 1 | 139 | 7.57e-84 | 249 |
| Msa1378600 | MtrunA17_Chr7g0252641 | 47.130 | 331 | 169 | 5 | 4 | 331 | 68 | 395 | 2.90e-83 | 258 |
| Msa1378600 | MtrunA17_Chr2g0316821 | 83.673 | 49 | 8 | 0 | 219 | 267 | 7 | 55 | 1.17e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1378600 | AT3G04120.1 | 88.427 | 337 | 39 | 0 | 1 | 337 | 1 | 337 | 0.0 | 617 |
| Msa1378600 | AT1G13440.1 | 87.834 | 337 | 41 | 0 | 1 | 337 | 1 | 337 | 0.0 | 613 |
| Msa1378600 | AT1G13440.2 | 80.712 | 337 | 37 | 1 | 1 | 337 | 1 | 309 | 0.0 | 545 |
| Msa1378600 | AT1G79530.1 | 73.494 | 332 | 87 | 1 | 5 | 336 | 86 | 416 | 1.32e-179 | 504 |
| Msa1378600 | AT1G16300.1 | 72.892 | 332 | 89 | 1 | 5 | 336 | 84 | 414 | 4.42e-177 | 497 |
| Msa1378600 | AT1G42970.1 | 47.507 | 341 | 170 | 7 | 4 | 338 | 80 | 417 | 1.06e-91 | 281 |
| Msa1378600 | AT1G12900.3 | 48.640 | 331 | 164 | 5 | 4 | 331 | 14 | 341 | 8.71e-88 | 268 |
| Msa1378600 | AT1G12900.4 | 48.640 | 331 | 164 | 5 | 4 | 331 | 14 | 341 | 8.71e-88 | 268 |
| Msa1378600 | AT1G12900.1 | 48.640 | 331 | 164 | 5 | 4 | 331 | 63 | 390 | 3.92e-87 | 268 |
| Msa1378600 | AT1G12900.5 | 48.640 | 331 | 164 | 5 | 4 | 331 | 105 | 432 | 7.30e-87 | 268 |
| Msa1378600 | AT3G26650.1 | 47.432 | 331 | 168 | 5 | 4 | 331 | 60 | 387 | 4.17e-85 | 263 |
| Msa1378600 | AT1G12900.2 | 53.361 | 238 | 109 | 2 | 95 | 331 | 72 | 308 | 3.30e-70 | 222 |
Find 131 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTTACCGGATTTAATT+TGG | 0.089951 | tig0020091:+31363 | Msa1378600:three_prime_UTR |
| CTTAACAAAATTGTCATTTA+AGG | 0.104366 | tig0020091:-30927 | None:intergenic |
| AGATATGTTTCTTACTAAAT+TGG | 0.164625 | tig0020091:-31886 | None:intergenic |
| ATGGCCCATCAACAGTCTTC+TGG | 0.178049 | tig0020091:-30247 | None:intergenic |
| CTAGCCCATGGGATCTCTTC+TGG | 0.197666 | tig0020091:-29071 | None:intergenic |
| AAATGAAAAGTCTGCAATTT+TGG | 0.214398 | tig0020091:+31510 | Msa1378600:three_prime_UTR |
| GAAGAAATGAAATGAGAAAT+AGG | 0.224747 | tig0020091:-28158 | None:intergenic |
| TCTTCCACCTCTCCAGTCTT+TGG | 0.239282 | tig0020091:-30273 | None:intergenic |
| TAGGTTATCAATGACAGATT+TGG | 0.312865 | tig0020091:+30090 | Msa1378600:intron |
| CCAAGACAACTCGTTGCTTA+TGG | 0.330150 | tig0020091:-31333 | None:intergenic |
| GGGTAGGTCAAGTTTGGTTC+CGG | 0.332740 | tig0020091:-28094 | None:intergenic |
| GCATTTACCGGATTTAATTT+GGG | 0.345001 | tig0020091:+31364 | Msa1378600:three_prime_UTR |
| GGTAGGTCAAGTTTGGTTCC+GGG | 0.358342 | tig0020091:-28093 | None:intergenic |
| GTTGATTCCGATCTTGATCT+TGG | 0.361687 | tig0020091:-28396 | None:intergenic |
| CTGTGAGCAAAGACAGTTAC+TGG | 0.361869 | tig0020091:-28835 | None:intergenic |
| TAGCCCATGGGATCTCTTCT+GGG | 0.364602 | tig0020091:-29070 | None:intergenic |
| CGTGACTTGTATGATCTCTA+TGG | 0.365089 | tig0020091:+31591 | Msa1378600:three_prime_UTR |
| GGCAGAAATGATGACCTTCT+TGG | 0.370496 | tig0020091:-29862 | None:intergenic |
| AAAACACTACGGTTCAATAA+GGG | 0.372319 | tig0020091:-31297 | None:intergenic |
| TGGCCCATCAACAGTCTTCT+GGG | 0.376977 | tig0020091:-30246 | None:intergenic |
| GTCGTCTCTACCGACTTTAT+TGG | 0.379304 | tig0020091:+30735 | Msa1378600:CDS |
| TAAAATAATGACTTGTTTGT+GGG | 0.385398 | tig0020091:-28116 | None:intergenic |
| ATGACAACGAGTTGGGTTAC+AGG | 0.391838 | tig0020091:+30963 | Msa1378600:CDS |
| AGCAGCTTTGATTTGATCAT+AGG | 0.392271 | tig0020091:-30556 | None:intergenic |
| AAGGGGCAAGCTTCAAGTTC+AGG | 0.394337 | tig0020091:-31279 | None:intergenic |
| CAAAGCTGCTGCTCATTTGA+AGG | 0.396278 | tig0020091:+29145 | Msa1378600:CDS |
| CATGGCGTATATGTGAAACT+TGG | 0.413845 | tig0020091:-31405 | None:intergenic |
| ATTTGGAAGAATCGGACGTT+TGG | 0.417594 | tig0020091:+28534 | Msa1378600:CDS |
| GCCGTGGTAGTGCTATAAAT+TGG | 0.427633 | tig0020091:+31182 | Msa1378600:three_prime_UTR |
| AACATGGGAGCATCCTTACT+AGG | 0.429169 | tig0020091:-29885 | None:intergenic |
| CCTCTCCAGTCTTTGGCTGA+TGG | 0.430890 | tig0020091:-30266 | None:intergenic |
| ATTTAAGGCAATTCCTGCCT+TGG | 0.435729 | tig0020091:-30912 | None:intergenic |
| CATCATTTCTGCCCCTAGTA+AGG | 0.438346 | tig0020091:+29872 | Msa1378600:CDS |
| CCATAAGCAACGAGTTGTCT+TGG | 0.444128 | tig0020091:+31333 | Msa1378600:three_prime_UTR |
| ATAAAATAATGACTTGTTTG+TGG | 0.448595 | tig0020091:-28117 | None:intergenic |
| AGCAGCAGCTTTGTCCTTGT+CGG | 0.451014 | tig0020091:-29135 | None:intergenic |
| GACTCTAAAACCCTTCTCTT+CGG | 0.451972 | tig0020091:+28805 | Msa1378600:CDS |
| ATTATCACCCAAATTAAATC+CGG | 0.452564 | tig0020091:-31371 | None:intergenic |
| GACAGATTTGGCATTGTTGA+GGG | 0.455882 | tig0020091:+30102 | Msa1378600:CDS |
| AAAGAACGATGATGAGTAGA+AGG | 0.455958 | tig0020091:-28186 | None:intergenic |
| GATGCTCCCATGTTTGTTGT+TGG | 0.458991 | tig0020091:+29894 | Msa1378600:CDS |
| ATGGGCCATCAGCCAAAGAC+TGG | 0.460505 | tig0020091:+30261 | Msa1378600:CDS |
| TTTCATCACCACTGATTACA+TGG | 0.466658 | tig0020091:+28612 | Msa1378600:CDS |
| GCCACCCAGAAGACTGTTGA+TGG | 0.469781 | tig0020091:+30242 | Msa1378600:intron |
| TCTTGGTATGACAACGAGTT+GGG | 0.473725 | tig0020091:+30956 | Msa1378600:CDS |
| AAAGTGCTTCCTGCTTTGAA+TGG | 0.474900 | tig0020091:+30450 | Msa1378600:CDS |
| TTTAAGTATGACAGTGTTCA+CGG | 0.475837 | tig0020091:+28751 | Msa1378600:CDS |
| CTGACAGGATTTGGAAGAAT+CGG | 0.477978 | tig0020091:+28526 | Msa1378600:intron |
| AAGAAATGAAATGAGAAATA+GGG | 0.480244 | tig0020091:-28157 | None:intergenic |
| AAGCATCAGATGAGATGAAA+GGG | 0.480271 | tig0020091:-31824 | None:intergenic |
| GCTTTGAATGGAAAGTTGAC+TGG | 0.484568 | tig0020091:+30462 | Msa1378600:CDS |
| TAGAGAGAGTAGAGTGATAG+CGG | 0.489639 | tig0020091:-28209 | None:intergenic |
| CTCTTGGTATGACAACGAGT+TGG | 0.490488 | tig0020091:+30955 | Msa1378600:CDS |
| CCTTCTCGAGCCTCACTGTA+AGG | 0.498253 | tig0020091:-30527 | None:intergenic |
| GGCAACTTGAAAGGAATCCT+TGG | 0.503097 | tig0020091:+30696 | Msa1378600:CDS |
| AACATCATTCCTAGCAGCAC+TGG | 0.508273 | tig0020091:+30308 | Msa1378600:CDS |
| CAGTAACTGTCTTTGCTCAC+AGG | 0.512766 | tig0020091:+28836 | Msa1378600:CDS |
| AGCATCTTTGATGCCAAGGC+AGG | 0.515199 | tig0020091:+30899 | Msa1378600:CDS |
| ACATGGGAGCATCCTTACTA+GGG | 0.515453 | tig0020091:-29884 | None:intergenic |
| CTGGCTTCTGACCGAAGAGA+AGG | 0.515502 | tig0020091:-28816 | None:intergenic |
| GTCAACTTTCCATTCAAAGC+AGG | 0.517781 | tig0020091:-30459 | None:intergenic |
| GATTCCTTTCAAGTTGCCCT+CGG | 0.519543 | tig0020091:-30691 | None:intergenic |
| TGACAGATTTGGCATTGTTG+AGG | 0.526967 | tig0020091:+30101 | Msa1378600:CDS |
| TCTGTGTCTTACTAGGCTGT+TGG | 0.529290 | tig0020091:+30426 | Msa1378600:intron |
| GTCAAGCATCTTTGATGCCA+AGG | 0.530071 | tig0020091:+30895 | Msa1378600:CDS |
| CTGCCTTGCACCACTTGCTA+AGG | 0.531519 | tig0020091:+29980 | Msa1378600:CDS |
| CCGACTTTATTGGTGATACC+AGG | 0.534272 | tig0020091:+30745 | Msa1378600:CDS |
| GAGTCCGAGGGCAACTTGAA+AGG | 0.535557 | tig0020091:+30687 | Msa1378600:CDS |
| GTTGGTAGTGCAGCTAGCAT+TGG | 0.535726 | tig0020091:-29958 | None:intergenic |
| ACCACTGTTCATTCTATCAC+TGG | 0.537052 | tig0020091:+30132 | Msa1378600:CDS |
| CTTTCTATAGCTTTATTACG+TGG | 0.539940 | tig0020091:+31844 | Msa1378600:three_prime_UTR |
| TTTCTGCAGGGAGGAGTCCG+AGG | 0.540118 | tig0020091:+30674 | Msa1378600:intron |
| AAAGAGGCCTAACGGCTGCT+AGG | 0.542903 | tig0020091:-31234 | None:intergenic |
| CAACTGAGACATCCACAGTT+GGG | 0.550377 | tig0020091:-30500 | None:intergenic |
| GAGATCCCATGGGCTAGCAC+TGG | 0.550739 | tig0020091:+29077 | Msa1378600:CDS |
| AGCTTTGATTTGATCATAGG+TGG | 0.553575 | tig0020091:-30553 | None:intergenic |
| ATGACAGTGTTCACGGACAA+TGG | 0.557529 | tig0020091:+28758 | Msa1378600:CDS |
| AATCTAGGGTGGTGCCAAGA+AGG | 0.565778 | tig0020091:+29848 | Msa1378600:intron |
| AAAGCATCAGATGAGATGAA+AGG | 0.565850 | tig0020091:-31825 | None:intergenic |
| TGAATAATTACCACCACCCA+TGG | 0.568534 | tig0020091:-28262 | None:intergenic |
| ACAACTGAGACATCCACAGT+TGG | 0.572472 | tig0020091:-30501 | None:intergenic |
| TCAGCACCAGTGCTAGCCCA+TGG | 0.575207 | tig0020091:-29083 | None:intergenic |
| TTAGCAGCTCCAGTGCTGCT+AGG | 0.576093 | tig0020091:-30317 | None:intergenic |
| GAATGGAAAGTTGACTGGAA+TGG | 0.578821 | tig0020091:+30467 | Msa1378600:CDS |
| AAAATAATGACTTGTTTGTG+GGG | 0.578904 | tig0020091:-28115 | None:intergenic |
| ATGTAATCAGTGGTGATGAA+AGG | 0.581417 | tig0020091:-28610 | None:intergenic |
| AGCAAGTGGTGCAAGGCAGT+TGG | 0.584713 | tig0020091:-29976 | None:intergenic |
| AAACACTACGGTTCAATAAG+GGG | 0.585174 | tig0020091:-31296 | None:intergenic |
| GGATCAGCCAAGATCAAGAT+CGG | 0.587412 | tig0020091:+28389 | Msa1378600:intron |
| TTGGAGATGATATCAAACTC+TGG | 0.587916 | tig0020091:-29939 | None:intergenic |
| GTTAACACCAACAACAAACA+TGG | 0.591563 | tig0020091:-29901 | None:intergenic |
| GGAACCCAGAAGAGATCCCA+TGG | 0.591598 | tig0020091:+29066 | Msa1378600:intron |
| AACGATGAGGTCAACCACAC+GGG | 0.595280 | tig0020091:-31127 | None:intergenic |
| TGGCTTCTGACCGAAGAGAA+GGG | 0.598953 | tig0020091:-28815 | None:intergenic |
| TTTGATTTGATCATAGGTGG+CGG | 0.599256 | tig0020091:-30550 | None:intergenic |
| CAGCACCAGTGCTAGCCCAT+GGG | 0.602177 | tig0020091:-29082 | None:intergenic |
| TGTTGTTGGTGTTAACGAGA+AGG | 0.604083 | tig0020091:+29908 | Msa1378600:CDS |
| AAATAATGACTTGTTTGTGG+GGG | 0.608109 | tig0020091:-28114 | None:intergenic |
| ATTGGATTGAATATCTAACA+AGG | 0.612667 | tig0020091:-31868 | None:intergenic |
| AAGATCAAGATCGGAATCAA+CGG | 0.613475 | tig0020091:+28398 | Msa1378600:CDS |
| GATATTATTGTTGAGTCCAC+CGG | 0.613504 | tig0020091:+29104 | Msa1378600:CDS |
| AGACATCCACAGTTGGGACA+CGG | 0.619930 | tig0020091:-30494 | None:intergenic |
| GGTAGAGACGACATCGTCCT+CGG | 0.620352 | tig0020091:-30724 | None:intergenic |
| GAACGATGAGGTCAACCACA+CGG | 0.620524 | tig0020091:-31128 | None:intergenic |
| AAGAGACATGCAAAAGAGCA+CGG | 0.620699 | tig0020091:-31739 | None:intergenic |
| TCAGCCAAAGACTGGAGAGG+TGG | 0.620752 | tig0020091:+30269 | Msa1378600:CDS |
| TTGGATTGAATATCTAACAA+GGG | 0.623650 | tig0020091:-31867 | None:intergenic |
| CTATTAGCCTAGCAGCCGTT+AGG | 0.623959 | tig0020091:+31227 | Msa1378600:three_prime_UTR |
| ATGCACCGGTCACGTAAGCG+TGG | 0.625905 | tig0020091:+28064 | None:intergenic |
| TTCTGCAGGGAGGAGTCCGA+GGG | 0.627559 | tig0020091:+30675 | Msa1378600:intron |
| CCTTACAGTGAGGCTCGAGA+AGG | 0.630029 | tig0020091:+30527 | Msa1378600:CDS |
| ATACCTTAGCAAGTGGTGCA+AGG | 0.631223 | tig0020091:-29983 | None:intergenic |
| CCACCCAGAAGACTGTTGAT+GGG | 0.632542 | tig0020091:+30243 | Msa1378600:CDS |
| GGCATTCCGTGTCCCAACTG+TGG | 0.636309 | tig0020091:+30488 | Msa1378600:CDS |
| CATCGTCCTCGGTGTAACCA+AGG | 0.636984 | tig0020091:-30713 | None:intergenic |
| CCTGGTATCACCAATAAAGT+CGG | 0.637238 | tig0020091:-30745 | None:intergenic |
| GCTAGGAATGATGTTAAATG+AGG | 0.638580 | tig0020091:-30300 | None:intergenic |
| GCTCATAATACCTTAGCAAG+TGG | 0.648538 | tig0020091:-29990 | None:intergenic |
| CCCATCAACAGTCTTCTGGG+TGG | 0.650761 | tig0020091:-30243 | None:intergenic |
| ACAATTCACGACGAATCACA+TGG | 0.652384 | tig0020091:-31765 | None:intergenic |
| TTTAAGCTGTTACATTGCCG+TGG | 0.662429 | tig0020091:+31166 | Msa1378600:exon |
| ACGTAAGCGTGGATAAAACC+CGG | 0.666813 | tig0020091:+28075 | None:intergenic |
| CCATCAGCCAAAGACTGGAG+AGG | 0.667444 | tig0020091:+30266 | Msa1378600:CDS |
| TTAACACCAACAACAAACAT+GGG | 0.669578 | tig0020091:-29900 | None:intergenic |
| CATGGGAGCATCCTTACTAG+GGG | 0.690619 | tig0020091:-29883 | None:intergenic |
| GCCAATTTATAGCACTACCA+CGG | 0.691846 | tig0020091:-31183 | None:intergenic |
| CAGTTGTTGACCTTACAGTG+AGG | 0.703068 | tig0020091:+30517 | Msa1378600:CDS |
| GAACCCAGAAGAGATCCCAT+GGG | 0.703112 | tig0020091:+29067 | Msa1378600:CDS |
| GTGATTCGTCGTGAATTGTG+AGG | 0.730098 | tig0020091:+31769 | Msa1378600:three_prime_UTR |
| ACCAGTGATAGAATGAACAG+TGG | 0.744850 | tig0020091:-30133 | None:intergenic |
| AGGAATCCTTGGTTACACCG+AGG | 0.796368 | tig0020091:+30707 | Msa1378600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGACTAATTGAAATATTAA+TGG | - | tig0020091:28327-28346 | None:intergenic | 15.0% |
| !! | ATTGGTATAATATTGATATT+TGG | + | tig0020091:28998-29017 | Msa1378600:intron | 15.0% |
| !! | ACTTATTACATTTAAAAAAG+AGG | - | tig0020091:31253-31272 | None:intergenic | 15.0% |
| !! | TAGACTAATTGAAATATTAA+TGG | - | tig0020091:28327-28346 | None:intergenic | 15.0% |
| !! | ATTGGTATAATATTGATATT+TGG | + | tig0020091:28998-29017 | Msa1378600:intron | 15.0% |
| !! | ACTTATTACATTTAAAAAAG+AGG | - | tig0020091:31253-31272 | None:intergenic | 15.0% |
| !!! | TAAAATAATGACTTGTTTGT+GGG | - | tig0020091:28119-28138 | None:intergenic | 20.0% |
| !!! | ATAAAATAATGACTTGTTTG+TGG | - | tig0020091:28120-28139 | None:intergenic | 20.0% |
| !! | AAGAAATGAAATGAGAAATA+GGG | - | tig0020091:28160-28179 | None:intergenic | 20.0% |
| !! | AATTAAGGAAAATAATGAAG+AGG | - | tig0020091:28291-28310 | None:intergenic | 20.0% |
| !! | GGAAAATTAACGAAAAATTA+AGG | - | tig0020091:28306-28325 | None:intergenic | 20.0% |
| !! | TAATGTTTATATATGCAACT+AGG | + | tig0020091:28904-28923 | Msa1378600:intron | 20.0% |
| !! | TATGTATGTGTACTTAATTT+CGG | + | tig0020091:28931-28950 | Msa1378600:intron | 20.0% |
| !! | TGTTACTGTTTAATTAGTAT+TGG | + | tig0020091:28980-28999 | Msa1378600:intron | 20.0% |
| !!! | AATTTTAGTAAACAGTAATC+AGG | - | tig0020091:29201-29220 | None:intergenic | 20.0% |
| !! | TGTATGTTGATATTATTATG+TGG | + | tig0020091:29363-29382 | Msa1378600:intron | 20.0% |
| !! | TTTAAAAGAGACAAATGTTA+CGG | - | tig0020091:29453-29472 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTTGTTTAATCT+AGG | + | tig0020091:29833-29852 | Msa1378600:intron | 20.0% |
| !!! | GTTTTTGTTTGTTTAATCTA+GGG | + | tig0020091:29834-29853 | Msa1378600:intron | 20.0% |
| !! | TTAGAGAATAAAATATCAGT+TGG | - | tig0020091:30015-30034 | None:intergenic | 20.0% |
| !!! | TACCTGTTTATTTATTTTGT+AGG | + | tig0020091:30071-30090 | Msa1378600:intron | 20.0% |
| !! | AACCTACAAAATAAATAAAC+AGG | - | tig0020091:30076-30095 | None:intergenic | 20.0% |
| !! | GGATTTGATATCTTATTATT+TGG | + | tig0020091:30182-30201 | Msa1378600:intron | 20.0% |
| !!! | CTTAACAAAATTGTCATTTA+AGG | - | tig0020091:30930-30949 | None:intergenic | 20.0% |
| !!! | TAAAATAATGACTTGTTTGT+GGG | - | tig0020091:28119-28138 | None:intergenic | 20.0% |
| !!! | ATAAAATAATGACTTGTTTG+TGG | - | tig0020091:28120-28139 | None:intergenic | 20.0% |
| !! | AAGAAATGAAATGAGAAATA+GGG | - | tig0020091:28160-28179 | None:intergenic | 20.0% |
| !! | AATTAAGGAAAATAATGAAG+AGG | - | tig0020091:28291-28310 | None:intergenic | 20.0% |
| !! | GGAAAATTAACGAAAAATTA+AGG | - | tig0020091:28306-28325 | None:intergenic | 20.0% |
| !! | TAATGTTTATATATGCAACT+AGG | + | tig0020091:28904-28923 | Msa1378600:intron | 20.0% |
| !! | TATGTATGTGTACTTAATTT+CGG | + | tig0020091:28931-28950 | Msa1378600:intron | 20.0% |
| !! | TGTTACTGTTTAATTAGTAT+TGG | + | tig0020091:28980-28999 | Msa1378600:intron | 20.0% |
| !!! | AATTTTAGTAAACAGTAATC+AGG | - | tig0020091:29201-29220 | None:intergenic | 20.0% |
| !! | TGTATGTTGATATTATTATG+TGG | + | tig0020091:29363-29382 | Msa1378600:intron | 20.0% |
| !! | TTTAAAAGAGACAAATGTTA+CGG | - | tig0020091:29453-29472 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTTGTTTAATCT+AGG | + | tig0020091:29833-29852 | Msa1378600:intron | 20.0% |
| !!! | GTTTTTGTTTGTTTAATCTA+GGG | + | tig0020091:29834-29853 | Msa1378600:intron | 20.0% |
| !! | TTAGAGAATAAAATATCAGT+TGG | - | tig0020091:30015-30034 | None:intergenic | 20.0% |
| !!! | TACCTGTTTATTTATTTTGT+AGG | + | tig0020091:30071-30090 | Msa1378600:intron | 20.0% |
| !! | AACCTACAAAATAAATAAAC+AGG | - | tig0020091:30076-30095 | None:intergenic | 20.0% |
| !! | GGATTTGATATCTTATTATT+TGG | + | tig0020091:30182-30201 | Msa1378600:intron | 20.0% |
| !!! | CTTAACAAAATTGTCATTTA+AGG | - | tig0020091:30930-30949 | None:intergenic | 20.0% |
| !!! | AAAATAATGACTTGTTTGTG+GGG | - | tig0020091:28118-28137 | None:intergenic | 25.0% |
| !! | AAATGAGAAATAGGGTTTTA+AGG | - | tig0020091:28152-28171 | None:intergenic | 25.0% |
| ! | GAAGAAATGAAATGAGAAAT+AGG | - | tig0020091:28161-28180 | None:intergenic | 25.0% |
| ! | AGAATTCGAAACAAAAACAA+AGG | - | tig0020091:28366-28385 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGTTTCGAATTC+TGG | + | tig0020091:28365-28384 | Msa1378600:intron | 25.0% |
| !!! | TGTCTATTTTTTTGTGCTTT+AGG | + | tig0020091:29045-29064 | Msa1378600:intron | 25.0% |
| ! | TTTGAAGGTTTGTATTTCAT+TGG | + | tig0020091:29160-29179 | Msa1378600:intron | 25.0% |
| !!! | ATATTACAATAGTTTCTAGC+AGG | + | tig0020091:29714-29733 | Msa1378600:intron | 25.0% |
| ! | CTTCTATTTACTGAATCTTA+TGG | + | tig0020091:29764-29783 | Msa1378600:intron | 25.0% |
| ! | TTATTCTCTAATTTCCATGT+TGG | + | tig0020091:30024-30043 | Msa1378600:intron | 25.0% |
| ! | AAATAAACAGGTAACAGTTA+TGG | - | tig0020091:30064-30083 | None:intergenic | 25.0% |
| ! | GCAGAAAATTAAACAAAACA+GGG | - | tig0020091:31103-31122 | None:intergenic | 25.0% |
| ! | TGCAGAAAATTAAACAAAAC+AGG | - | tig0020091:31104-31123 | None:intergenic | 25.0% |
| !! | TTGGATTTTTATGCATTTAC+CGG | + | tig0020091:31352-31371 | Msa1378600:three_prime_UTR | 25.0% |
| ! | ATTATCACCCAAATTAAATC+CGG | - | tig0020091:31374-31393 | None:intergenic | 25.0% |
| !! | AGTTTTTAATGCTCTTTTCA+TGG | - | tig0020091:31426-31445 | None:intergenic | 25.0% |
| !! | AAATGAAAAGTCTGCAATTT+TGG | + | tig0020091:31510-31529 | Msa1378600:three_prime_UTR | 25.0% |
| ! | TTGGATTGAATATCTAACAA+GGG | - | tig0020091:31870-31889 | None:intergenic | 25.0% |
| ! | ATTGGATTGAATATCTAACA+AGG | - | tig0020091:31871-31890 | None:intergenic | 25.0% |
| !!! | AAAATAATGACTTGTTTGTG+GGG | - | tig0020091:28118-28137 | None:intergenic | 25.0% |
| !! | AAATGAGAAATAGGGTTTTA+AGG | - | tig0020091:28152-28171 | None:intergenic | 25.0% |
| ! | GAAGAAATGAAATGAGAAAT+AGG | - | tig0020091:28161-28180 | None:intergenic | 25.0% |
| ! | AGAATTCGAAACAAAAACAA+AGG | - | tig0020091:28366-28385 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGTTTCGAATTC+TGG | + | tig0020091:28365-28384 | Msa1378600:intron | 25.0% |
| !!! | TGTCTATTTTTTTGTGCTTT+AGG | + | tig0020091:29045-29064 | Msa1378600:intron | 25.0% |
| ! | TTTGAAGGTTTGTATTTCAT+TGG | + | tig0020091:29160-29179 | Msa1378600:intron | 25.0% |
| !!! | ATATTACAATAGTTTCTAGC+AGG | + | tig0020091:29714-29733 | Msa1378600:intron | 25.0% |
| ! | CTTCTATTTACTGAATCTTA+TGG | + | tig0020091:29764-29783 | Msa1378600:intron | 25.0% |
| ! | TTATTCTCTAATTTCCATGT+TGG | + | tig0020091:30024-30043 | Msa1378600:intron | 25.0% |
| ! | AAATAAACAGGTAACAGTTA+TGG | - | tig0020091:30064-30083 | None:intergenic | 25.0% |
| ! | GCAGAAAATTAAACAAAACA+GGG | - | tig0020091:31103-31122 | None:intergenic | 25.0% |
| ! | TGCAGAAAATTAAACAAAAC+AGG | - | tig0020091:31104-31123 | None:intergenic | 25.0% |
| !! | TTGGATTTTTATGCATTTAC+CGG | + | tig0020091:31352-31371 | Msa1378600:three_prime_UTR | 25.0% |
| ! | ATTATCACCCAAATTAAATC+CGG | - | tig0020091:31374-31393 | None:intergenic | 25.0% |
| !! | AGTTTTTAATGCTCTTTTCA+TGG | - | tig0020091:31426-31445 | None:intergenic | 25.0% |
| !! | AAATGAAAAGTCTGCAATTT+TGG | + | tig0020091:31510-31529 | Msa1378600:three_prime_UTR | 25.0% |
| ! | TTGGATTGAATATCTAACAA+GGG | - | tig0020091:31870-31889 | None:intergenic | 25.0% |
| ! | ATTGGATTGAATATCTAACA+AGG | - | tig0020091:31871-31890 | None:intergenic | 25.0% |
| !! | AAATAATGACTTGTTTGTGG+GGG | - | tig0020091:28117-28136 | None:intergenic | 30.0% |
| ! | TAATTTTGTTCGTAACTGAC+AGG | + | tig0020091:28511-28530 | Msa1378600:intron | 30.0% |
| ! | ATTTTGTACCATGTAATCAG+TGG | - | tig0020091:28623-28642 | None:intergenic | 30.0% |
| ATGGTACAAAATTCTTCCTT+CGG | + | tig0020091:28631-28650 | Msa1378600:intron | 30.0% | |
| AATAGACAAACAAAAACCGA+AGG | - | tig0020091:28650-28669 | None:intergenic | 30.0% | |
| !! | AGATCTGATTTATTTCTGTG+TGG | + | tig0020091:28708-28727 | Msa1378600:intron | 30.0% |
| TTTAAGTATGACAGTGTTCA+CGG | + | tig0020091:28751-28770 | Msa1378600:CDS | 30.0% | |
| ! | ACTTAATTTCGGTGTAGATA+TGG | + | tig0020091:28942-28961 | Msa1378600:intron | 30.0% |
| ! | CTTAATTTCGGTGTAGATAT+GGG | + | tig0020091:28943-28962 | Msa1378600:intron | 30.0% |
| AACTATTATGTGCAGCAATT+GGG | - | tig0020091:29238-29257 | None:intergenic | 30.0% | |
| ! | CTATTTTCTAAACATGCTCA+TGG | + | tig0020091:29404-29423 | Msa1378600:intron | 30.0% |
| TAACAATACATTGCAAGTTG+TGG | - | tig0020091:29740-29759 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTATGAAGTGTAG+TGG | + | tig0020091:29801-29820 | Msa1378600:intron | 30.0% |
| !! | AGTTTTGTATGAAGTGTAGT+GGG | + | tig0020091:29802-29821 | Msa1378600:intron | 30.0% |
| TTTGTTTGTTTAATCTAGGG+TGG | + | tig0020091:29837-29856 | Msa1378600:intron | 30.0% | |
| TTAACACCAACAACAAACAT+GGG | - | tig0020091:29903-29922 | None:intergenic | 30.0% | |
| TAGGTTATCAATGACAGATT+TGG | + | tig0020091:30090-30109 | Msa1378600:intron | 30.0% | |
| CAGCATGAAAAGAATGAATT+AGG | - | tig0020091:30210-30229 | None:intergenic | 30.0% | |
| ATTAGACAACACAATAACAG+TGG | - | tig0020091:30378-30397 | None:intergenic | 30.0% | |
| ! | TTTTCATTCTGTGTCTTACT+AGG | + | tig0020091:30419-30438 | Msa1378600:intron | 30.0% |
| CTAAAATACTTGATCACCAA+GGG | - | tig0020091:30611-30630 | None:intergenic | 30.0% | |
| !! | TTTAACATTTCTGTTTCTGC+AGG | + | tig0020091:30661-30680 | Msa1378600:intron | 30.0% |
| !! | TTAACATTTCTGTTTCTGCA+GGG | + | tig0020091:30662-30681 | Msa1378600:intron | 30.0% |
| CTGCTAGTATAATATTTACC+TGG | - | tig0020091:30766-30785 | None:intergenic | 30.0% | |
| CAGGTAAATATTATACTAGC+AGG | + | tig0020091:30764-30783 | Msa1378600:intron | 30.0% | |
| ! | TTTTGTGTTATCAATGTTCC+AGG | + | tig0020091:30873-30892 | Msa1378600:intron | 30.0% |
| ! | ATTTTGTTAAGCTTGTCTCT+TGG | + | tig0020091:30939-30958 | Msa1378600:CDS | 30.0% |
| TCAACAATAAACCATACGAA+AGG | - | tig0020091:31004-31023 | None:intergenic | 30.0% | |
| TTCAAGAATTTCAACCAACT+AGG | - | tig0020091:31036-31055 | None:intergenic | 30.0% | |
| CATTTAAAAAAGAGGCCTAA+CGG | - | tig0020091:31245-31264 | None:intergenic | 30.0% | |
| AAAACACTACGGTTCAATAA+GGG | - | tig0020091:31300-31319 | None:intergenic | 30.0% | |
| AAAAACACTACGGTTCAATA+AGG | - | tig0020091:31301-31320 | None:intergenic | 30.0% | |
| ! | TTATTGAACCGTAGTGTTTT+TGG | + | tig0020091:31300-31319 | Msa1378600:three_prime_UTR | 30.0% |
| TGCATTTACCGGATTTAATT+TGG | + | tig0020091:31363-31382 | Msa1378600:three_prime_UTR | 30.0% | |
| ! | GCATTTACCGGATTTAATTT+GGG | + | tig0020091:31364-31383 | Msa1378600:three_prime_UTR | 30.0% |
| !! | CTTTCTATAGCTTTATTACG+TGG | + | tig0020091:31844-31863 | Msa1378600:three_prime_UTR | 30.0% |
| !! | AAATAATGACTTGTTTGTGG+GGG | - | tig0020091:28117-28136 | None:intergenic | 30.0% |
| ! | TAATTTTGTTCGTAACTGAC+AGG | + | tig0020091:28511-28530 | Msa1378600:intron | 30.0% |
| ! | ATTTTGTACCATGTAATCAG+TGG | - | tig0020091:28623-28642 | None:intergenic | 30.0% |
| ATGGTACAAAATTCTTCCTT+CGG | + | tig0020091:28631-28650 | Msa1378600:intron | 30.0% | |
| AATAGACAAACAAAAACCGA+AGG | - | tig0020091:28650-28669 | None:intergenic | 30.0% | |
| !! | AGATCTGATTTATTTCTGTG+TGG | + | tig0020091:28708-28727 | Msa1378600:intron | 30.0% |
| TTTAAGTATGACAGTGTTCA+CGG | + | tig0020091:28751-28770 | Msa1378600:CDS | 30.0% | |
| ! | ACTTAATTTCGGTGTAGATA+TGG | + | tig0020091:28942-28961 | Msa1378600:intron | 30.0% |
| ! | CTTAATTTCGGTGTAGATAT+GGG | + | tig0020091:28943-28962 | Msa1378600:intron | 30.0% |
| AACTATTATGTGCAGCAATT+GGG | - | tig0020091:29238-29257 | None:intergenic | 30.0% | |
| ! | CTATTTTCTAAACATGCTCA+TGG | + | tig0020091:29404-29423 | Msa1378600:intron | 30.0% |
| TAACAATACATTGCAAGTTG+TGG | - | tig0020091:29740-29759 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTATGAAGTGTAG+TGG | + | tig0020091:29801-29820 | Msa1378600:intron | 30.0% |
| !! | AGTTTTGTATGAAGTGTAGT+GGG | + | tig0020091:29802-29821 | Msa1378600:intron | 30.0% |
| TTTGTTTGTTTAATCTAGGG+TGG | + | tig0020091:29837-29856 | Msa1378600:intron | 30.0% | |
| TTAACACCAACAACAAACAT+GGG | - | tig0020091:29903-29922 | None:intergenic | 30.0% | |
| TAGGTTATCAATGACAGATT+TGG | + | tig0020091:30090-30109 | Msa1378600:intron | 30.0% | |
| CAGCATGAAAAGAATGAATT+AGG | - | tig0020091:30210-30229 | None:intergenic | 30.0% | |
| ATTAGACAACACAATAACAG+TGG | - | tig0020091:30378-30397 | None:intergenic | 30.0% | |
| ! | TTTTCATTCTGTGTCTTACT+AGG | + | tig0020091:30419-30438 | Msa1378600:intron | 30.0% |
| CTAAAATACTTGATCACCAA+GGG | - | tig0020091:30611-30630 | None:intergenic | 30.0% | |
| !! | TTTAACATTTCTGTTTCTGC+AGG | + | tig0020091:30661-30680 | Msa1378600:intron | 30.0% |
| !! | TTAACATTTCTGTTTCTGCA+GGG | + | tig0020091:30662-30681 | Msa1378600:intron | 30.0% |
| CTGCTAGTATAATATTTACC+TGG | - | tig0020091:30766-30785 | None:intergenic | 30.0% | |
| CAGGTAAATATTATACTAGC+AGG | + | tig0020091:30764-30783 | Msa1378600:intron | 30.0% | |
| ! | TTTTGTGTTATCAATGTTCC+AGG | + | tig0020091:30873-30892 | Msa1378600:intron | 30.0% |
| ! | ATTTTGTTAAGCTTGTCTCT+TGG | + | tig0020091:30939-30958 | Msa1378600:CDS | 30.0% |
| TCAACAATAAACCATACGAA+AGG | - | tig0020091:31004-31023 | None:intergenic | 30.0% | |
| TTCAAGAATTTCAACCAACT+AGG | - | tig0020091:31036-31055 | None:intergenic | 30.0% | |
| CATTTAAAAAAGAGGCCTAA+CGG | - | tig0020091:31245-31264 | None:intergenic | 30.0% | |
| AAAACACTACGGTTCAATAA+GGG | - | tig0020091:31300-31319 | None:intergenic | 30.0% | |
| AAAAACACTACGGTTCAATA+AGG | - | tig0020091:31301-31320 | None:intergenic | 30.0% | |
| ! | TTATTGAACCGTAGTGTTTT+TGG | + | tig0020091:31300-31319 | Msa1378600:three_prime_UTR | 30.0% |
| TGCATTTACCGGATTTAATT+TGG | + | tig0020091:31363-31382 | Msa1378600:three_prime_UTR | 30.0% | |
| ! | GCATTTACCGGATTTAATTT+GGG | + | tig0020091:31364-31383 | Msa1378600:three_prime_UTR | 30.0% |
| !! | CTTTCTATAGCTTTATTACG+TGG | + | tig0020091:31844-31863 | Msa1378600:three_prime_UTR | 30.0% |
| AAAGAACGATGATGAGTAGA+AGG | - | tig0020091:28189-28208 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTTCGAATTCTGG+TGG | + | tig0020091:28368-28387 | Msa1378600:intron | 35.0% |
| AAGATCAAGATCGGAATCAA+CGG | + | tig0020091:28398-28417 | Msa1378600:CDS | 35.0% | |
| CTCTTCATTTCTGCATAGAT+CGG | + | tig0020091:28445-28464 | Msa1378600:intron | 35.0% | |
| ! | ATGTAATCAGTGGTGATGAA+AGG | - | tig0020091:28613-28632 | None:intergenic | 35.0% |
| ! | TTTCATCACCACTGATTACA+TGG | + | tig0020091:28612-28631 | Msa1378600:CDS | 35.0% |
| GATATTATTGTTGAGTCCAC+CGG | + | tig0020091:29104-29123 | Msa1378600:CDS | 35.0% | |
| CAACTATTATGTGCAGCAAT+TGG | - | tig0020091:29239-29258 | None:intergenic | 35.0% | |
| ATCATATATGTGCTGCAACT+GGG | - | tig0020091:29293-29312 | None:intergenic | 35.0% | |
| AACATACATGTGCAGCAATT+GGG | - | tig0020091:29351-29370 | None:intergenic | 35.0% | |
| TTCTTCAATAGCAGCTATAC+TGG | + | tig0020091:29517-29536 | Msa1378600:intron | 35.0% | |
| GTTAACACCAACAACAAACA+TGG | - | tig0020091:29904-29923 | None:intergenic | 35.0% | |
| TTGGAGATGATATCAAACTC+TGG | - | tig0020091:29942-29961 | None:intergenic | 35.0% | |
| GCTAGGAATGATGTTAAATG+AGG | - | tig0020091:30303-30322 | None:intergenic | 35.0% | |
| ATGTGATGATTCTCTTGATG+TGG | + | tig0020091:30396-30415 | Msa1378600:intron | 35.0% | |
| !! | TTTGATTTGATCATAGGTGG+CGG | - | tig0020091:30553-30572 | None:intergenic | 35.0% |
| !! | AGCTTTGATTTGATCATAGG+TGG | - | tig0020091:30556-30575 | None:intergenic | 35.0% |
| !! | AGCAGCTTTGATTTGATCAT+AGG | - | tig0020091:30559-30578 | None:intergenic | 35.0% |
| GCTAAAATACTTGATCACCA+AGG | - | tig0020091:30612-30631 | None:intergenic | 35.0% | |
| !!! | TGGTGATCAAGTATTTTAGC+AGG | + | tig0020091:30612-30631 | Msa1378600:intron | 35.0% |
| GTTGATATCTGAATCCTAGT+TGG | + | tig0020091:31019-31038 | Msa1378600:intron | 35.0% | |
| GACTGTAAGAAACAAAAAGC+AGG | - | tig0020091:31208-31227 | None:intergenic | 35.0% | |
| AAACACTACGGTTCAATAAG+GGG | - | tig0020091:31299-31318 | None:intergenic | 35.0% | |
| TTGAGCAACCAAAAACACTA+CGG | - | tig0020091:31311-31330 | None:intergenic | 35.0% | |
| TGCATCTCTTGAAGAAAAAG+TGG | + | tig0020091:31469-31488 | Msa1378600:three_prime_UTR | 35.0% | |
| GCATCTCTTGAAGAAAAAGT+GGG | + | tig0020091:31470-31489 | Msa1378600:three_prime_UTR | 35.0% | |
| ! | GCAGACTTTTCATTTCATCT+AGG | - | tig0020091:31505-31524 | None:intergenic | 35.0% |
| !! | TCTGCAATTTTGGTCGAATT+TGG | + | tig0020091:31520-31539 | Msa1378600:three_prime_UTR | 35.0% |
| ! | TTTTGCATAAGCAGTTATCG+TGG | + | tig0020091:31553-31572 | Msa1378600:three_prime_UTR | 35.0% |
| AAGCATCAGATGAGATGAAA+GGG | - | tig0020091:31827-31846 | None:intergenic | 35.0% | |
| ! | AAAGCATCAGATGAGATGAA+AGG | - | tig0020091:31828-31847 | None:intergenic | 35.0% |
| AAAGAACGATGATGAGTAGA+AGG | - | tig0020091:28189-28208 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTTCGAATTCTGG+TGG | + | tig0020091:28368-28387 | Msa1378600:intron | 35.0% |
| AAGATCAAGATCGGAATCAA+CGG | + | tig0020091:28398-28417 | Msa1378600:CDS | 35.0% | |
| CTCTTCATTTCTGCATAGAT+CGG | + | tig0020091:28445-28464 | Msa1378600:intron | 35.0% | |
| ! | ATGTAATCAGTGGTGATGAA+AGG | - | tig0020091:28613-28632 | None:intergenic | 35.0% |
| ! | TTTCATCACCACTGATTACA+TGG | + | tig0020091:28612-28631 | Msa1378600:CDS | 35.0% |
| GATATTATTGTTGAGTCCAC+CGG | + | tig0020091:29104-29123 | Msa1378600:CDS | 35.0% | |
| CAACTATTATGTGCAGCAAT+TGG | - | tig0020091:29239-29258 | None:intergenic | 35.0% | |
| ATCATATATGTGCTGCAACT+GGG | - | tig0020091:29293-29312 | None:intergenic | 35.0% | |
| AACATACATGTGCAGCAATT+GGG | - | tig0020091:29351-29370 | None:intergenic | 35.0% | |
| TTCTTCAATAGCAGCTATAC+TGG | + | tig0020091:29517-29536 | Msa1378600:intron | 35.0% | |
| GTTAACACCAACAACAAACA+TGG | - | tig0020091:29904-29923 | None:intergenic | 35.0% | |
| TTGGAGATGATATCAAACTC+TGG | - | tig0020091:29942-29961 | None:intergenic | 35.0% | |
| GCTAGGAATGATGTTAAATG+AGG | - | tig0020091:30303-30322 | None:intergenic | 35.0% | |
| ATGTGATGATTCTCTTGATG+TGG | + | tig0020091:30396-30415 | Msa1378600:intron | 35.0% | |
| !! | TTTGATTTGATCATAGGTGG+CGG | - | tig0020091:30553-30572 | None:intergenic | 35.0% |
| !! | AGCTTTGATTTGATCATAGG+TGG | - | tig0020091:30556-30575 | None:intergenic | 35.0% |
| !! | AGCAGCTTTGATTTGATCAT+AGG | - | tig0020091:30559-30578 | None:intergenic | 35.0% |
| GCTAAAATACTTGATCACCA+AGG | - | tig0020091:30612-30631 | None:intergenic | 35.0% | |
| !!! | TGGTGATCAAGTATTTTAGC+AGG | + | tig0020091:30612-30631 | Msa1378600:intron | 35.0% |
| GTTGATATCTGAATCCTAGT+TGG | + | tig0020091:31019-31038 | Msa1378600:intron | 35.0% | |
| GACTGTAAGAAACAAAAAGC+AGG | - | tig0020091:31208-31227 | None:intergenic | 35.0% | |
| AAACACTACGGTTCAATAAG+GGG | - | tig0020091:31299-31318 | None:intergenic | 35.0% | |
| TTGAGCAACCAAAAACACTA+CGG | - | tig0020091:31311-31330 | None:intergenic | 35.0% | |
| TGCATCTCTTGAAGAAAAAG+TGG | + | tig0020091:31469-31488 | Msa1378600:three_prime_UTR | 35.0% | |
| GCATCTCTTGAAGAAAAAGT+GGG | + | tig0020091:31470-31489 | Msa1378600:three_prime_UTR | 35.0% | |
| ! | GCAGACTTTTCATTTCATCT+AGG | - | tig0020091:31505-31524 | None:intergenic | 35.0% |
| !! | TCTGCAATTTTGGTCGAATT+TGG | + | tig0020091:31520-31539 | Msa1378600:three_prime_UTR | 35.0% |
| ! | TTTTGCATAAGCAGTTATCG+TGG | + | tig0020091:31553-31572 | Msa1378600:three_prime_UTR | 35.0% |
| AAGCATCAGATGAGATGAAA+GGG | - | tig0020091:31827-31846 | None:intergenic | 35.0% | |
| ! | AAAGCATCAGATGAGATGAA+AGG | - | tig0020091:31828-31847 | None:intergenic | 35.0% |
| TAGAGAGAGTAGAGTGATAG+CGG | - | tig0020091:28212-28231 | None:intergenic | 40.0% | |
| !!! | TCCTCTTTGTTTTTCAGCCA+TGG | + | tig0020091:28245-28264 | Msa1378600:exon | 40.0% |
| !!! | CCTCTTTGTTTTTCAGCCAT+GGG | + | tig0020091:28246-28265 | Msa1378600:exon | 40.0% |
| TGAATAATTACCACCACCCA+TGG | - | tig0020091:28265-28284 | None:intergenic | 40.0% | |
| ! | GTTGATTCCGATCTTGATCT+TGG | - | tig0020091:28399-28418 | None:intergenic | 40.0% |
| CAGAAATGAAGAGAGATCGA+AGG | - | tig0020091:28438-28457 | None:intergenic | 40.0% | |
| TGTTCGTAACTGACAGGATT+TGG | + | tig0020091:28517-28536 | Msa1378600:intron | 40.0% | |
| CTGACAGGATTTGGAAGAAT+CGG | + | tig0020091:28526-28545 | Msa1378600:intron | 40.0% | |
| ATTTGGAAGAATCGGACGTT+TGG | + | tig0020091:28534-28553 | Msa1378600:CDS | 40.0% | |
| !! | GACTCTAAAACCCTTCTCTT+CGG | + | tig0020091:28805-28824 | Msa1378600:CDS | 40.0% |
| CATCATATATGTGCTGCAAC+TGG | - | tig0020091:29294-29313 | None:intergenic | 40.0% | |
| CAACATACATGTGCAGCAAT+TGG | - | tig0020091:29352-29371 | None:intergenic | 40.0% | |
| AGTGTATCGCAGAACAATAG+TGG | - | tig0020091:29579-29598 | None:intergenic | 40.0% | |
| TTGTCACATAGCTGCTATAG+TGG | + | tig0020091:29614-29633 | Msa1378600:intron | 40.0% | |
| ACTATATCACAACTGCGTAG+CGG | + | tig0020091:29638-29657 | Msa1378600:intron | 40.0% | |
| !! | TGTTGTTGGTGTTAACGAGA+AGG | + | tig0020091:29908-29927 | Msa1378600:CDS | 40.0% |
| GCTCATAATACCTTAGCAAG+TGG | - | tig0020091:29993-30012 | None:intergenic | 40.0% | |
| GTAACAGTTATGGCCTCATA+CGG | - | tig0020091:30054-30073 | None:intergenic | 40.0% | |
| TGACAGATTTGGCATTGTTG+AGG | + | tig0020091:30101-30120 | Msa1378600:CDS | 40.0% | |
| GACAGATTTGGCATTGTTGA+GGG | + | tig0020091:30102-30121 | Msa1378600:CDS | 40.0% | |
| ACCACTGTTCATTCTATCAC+TGG | + | tig0020091:30132-30151 | Msa1378600:CDS | 40.0% | |
| ACCAGTGATAGAATGAACAG+TGG | - | tig0020091:30136-30155 | None:intergenic | 40.0% | |
| CTGTTCATTCTATCACTGGT+AGG | + | tig0020091:30136-30155 | Msa1378600:intron | 40.0% | |
| TAGTGCTAGTGAGTAACTCT+TGG | + | tig0020091:30161-30180 | Msa1378600:intron | 40.0% | |
| ! | AAAGTGCTTCCTGCTTTGAA+TGG | + | tig0020091:30450-30469 | Msa1378600:CDS | 40.0% |
| GTCAACTTTCCATTCAAAGC+AGG | - | tig0020091:30462-30481 | None:intergenic | 40.0% | |
| ! | GCTTTGAATGGAAAGTTGAC+TGG | + | tig0020091:30462-30481 | Msa1378600:CDS | 40.0% |
| GAATGGAAAGTTGACTGGAA+TGG | + | tig0020091:30467-30486 | Msa1378600:CDS | 40.0% | |
| CCTGGTATCACCAATAAAGT+CGG | - | tig0020091:30748-30767 | None:intergenic | 40.0% | |
| ! | ATTTAAGGCAATTCCTGCCT+TGG | - | tig0020091:30915-30934 | None:intergenic | 40.0% |
| TCTTGGTATGACAACGAGTT+GGG | + | tig0020091:30956-30975 | Msa1378600:CDS | 40.0% | |
| ATTCAGTCTGACCTTTCGTA+TGG | + | tig0020091:30990-31009 | Msa1378600:intron | 40.0% | |
| ! | GTTTTGCAATGTGAACGATG+AGG | - | tig0020091:31143-31162 | None:intergenic | 40.0% |
| TTTAAGCTGTTACATTGCCG+TGG | + | tig0020091:31166-31185 | Msa1378600:exon | 40.0% | |
| GCCAATTTATAGCACTACCA+CGG | - | tig0020091:31186-31205 | None:intergenic | 40.0% | |
| CATGGCGTATATGTGAAACT+TGG | - | tig0020091:31408-31427 | None:intergenic | 40.0% | |
| ! | CGTGACTTGTATGATCTCTA+TGG | + | tig0020091:31591-31610 | Msa1378600:three_prime_UTR | 40.0% |
| AAGAGACATGCAAAAGAGCA+CGG | - | tig0020091:31742-31761 | None:intergenic | 40.0% | |
| ACAATTCACGACGAATCACA+TGG | - | tig0020091:31768-31787 | None:intergenic | 40.0% | |
| TAGAGAGAGTAGAGTGATAG+CGG | - | tig0020091:28212-28231 | None:intergenic | 40.0% | |
| !!! | TCCTCTTTGTTTTTCAGCCA+TGG | + | tig0020091:28245-28264 | Msa1378600:exon | 40.0% |
| !!! | CCTCTTTGTTTTTCAGCCAT+GGG | + | tig0020091:28246-28265 | Msa1378600:exon | 40.0% |
| TGAATAATTACCACCACCCA+TGG | - | tig0020091:28265-28284 | None:intergenic | 40.0% | |
| ! | GTTGATTCCGATCTTGATCT+TGG | - | tig0020091:28399-28418 | None:intergenic | 40.0% |
| CAGAAATGAAGAGAGATCGA+AGG | - | tig0020091:28438-28457 | None:intergenic | 40.0% | |
| TGTTCGTAACTGACAGGATT+TGG | + | tig0020091:28517-28536 | Msa1378600:intron | 40.0% | |
| CTGACAGGATTTGGAAGAAT+CGG | + | tig0020091:28526-28545 | Msa1378600:intron | 40.0% | |
| ATTTGGAAGAATCGGACGTT+TGG | + | tig0020091:28534-28553 | Msa1378600:CDS | 40.0% | |
| !! | GACTCTAAAACCCTTCTCTT+CGG | + | tig0020091:28805-28824 | Msa1378600:CDS | 40.0% |
| CATCATATATGTGCTGCAAC+TGG | - | tig0020091:29294-29313 | None:intergenic | 40.0% | |
| CAACATACATGTGCAGCAAT+TGG | - | tig0020091:29352-29371 | None:intergenic | 40.0% | |
| AGTGTATCGCAGAACAATAG+TGG | - | tig0020091:29579-29598 | None:intergenic | 40.0% | |
| TTGTCACATAGCTGCTATAG+TGG | + | tig0020091:29614-29633 | Msa1378600:intron | 40.0% | |
| ACTATATCACAACTGCGTAG+CGG | + | tig0020091:29638-29657 | Msa1378600:intron | 40.0% | |
| !! | TGTTGTTGGTGTTAACGAGA+AGG | + | tig0020091:29908-29927 | Msa1378600:CDS | 40.0% |
| GCTCATAATACCTTAGCAAG+TGG | - | tig0020091:29993-30012 | None:intergenic | 40.0% | |
| GTAACAGTTATGGCCTCATA+CGG | - | tig0020091:30054-30073 | None:intergenic | 40.0% | |
| TGACAGATTTGGCATTGTTG+AGG | + | tig0020091:30101-30120 | Msa1378600:CDS | 40.0% | |
| GACAGATTTGGCATTGTTGA+GGG | + | tig0020091:30102-30121 | Msa1378600:CDS | 40.0% | |
| ACCACTGTTCATTCTATCAC+TGG | + | tig0020091:30132-30151 | Msa1378600:CDS | 40.0% | |
| ACCAGTGATAGAATGAACAG+TGG | - | tig0020091:30136-30155 | None:intergenic | 40.0% | |
| CTGTTCATTCTATCACTGGT+AGG | + | tig0020091:30136-30155 | Msa1378600:intron | 40.0% | |
| TAGTGCTAGTGAGTAACTCT+TGG | + | tig0020091:30161-30180 | Msa1378600:intron | 40.0% | |
| ! | AAAGTGCTTCCTGCTTTGAA+TGG | + | tig0020091:30450-30469 | Msa1378600:CDS | 40.0% |
| GTCAACTTTCCATTCAAAGC+AGG | - | tig0020091:30462-30481 | None:intergenic | 40.0% | |
| ! | GCTTTGAATGGAAAGTTGAC+TGG | + | tig0020091:30462-30481 | Msa1378600:CDS | 40.0% |
| GAATGGAAAGTTGACTGGAA+TGG | + | tig0020091:30467-30486 | Msa1378600:CDS | 40.0% | |
| CCTGGTATCACCAATAAAGT+CGG | - | tig0020091:30748-30767 | None:intergenic | 40.0% | |
| ! | ATTTAAGGCAATTCCTGCCT+TGG | - | tig0020091:30915-30934 | None:intergenic | 40.0% |
| TCTTGGTATGACAACGAGTT+GGG | + | tig0020091:30956-30975 | Msa1378600:CDS | 40.0% | |
| ATTCAGTCTGACCTTTCGTA+TGG | + | tig0020091:30990-31009 | Msa1378600:intron | 40.0% | |
| ! | GTTTTGCAATGTGAACGATG+AGG | - | tig0020091:31143-31162 | None:intergenic | 40.0% |
| TTTAAGCTGTTACATTGCCG+TGG | + | tig0020091:31166-31185 | Msa1378600:exon | 40.0% | |
| GCCAATTTATAGCACTACCA+CGG | - | tig0020091:31186-31205 | None:intergenic | 40.0% | |
| CATGGCGTATATGTGAAACT+TGG | - | tig0020091:31408-31427 | None:intergenic | 40.0% | |
| ! | CGTGACTTGTATGATCTCTA+TGG | + | tig0020091:31591-31610 | Msa1378600:three_prime_UTR | 40.0% |
| AAGAGACATGCAAAAGAGCA+CGG | - | tig0020091:31742-31761 | None:intergenic | 40.0% | |
| ACAATTCACGACGAATCACA+TGG | - | tig0020091:31768-31787 | None:intergenic | 40.0% | |
| !! | AATGACTTGTTTGTGGGGGT+AGG | - | tig0020091:28113-28132 | None:intergenic | 45.0% |
| CCCATGGCTGAAAAACAAAG+AGG | - | tig0020091:28249-28268 | None:intergenic | 45.0% | |
| !!! | CTTTGTTTTTCAGCCATGGG+TGG | + | tig0020091:28249-28268 | Msa1378600:exon | 45.0% |
| GGATCAGCCAAGATCAAGAT+CGG | + | tig0020091:28389-28408 | Msa1378600:intron | 45.0% | |
| ATGACAGTGTTCACGGACAA+TGG | + | tig0020091:28758-28777 | Msa1378600:CDS | 45.0% | |
| CTGTGAGCAAAGACAGTTAC+TGG | - | tig0020091:28838-28857 | None:intergenic | 45.0% | |
| CAGTAACTGTCTTTGCTCAC+AGG | + | tig0020091:28836-28855 | Msa1378600:CDS | 45.0% | |
| GTCCTTGTCGGTAAAAACAC+CGG | - | tig0020091:29126-29145 | None:intergenic | 45.0% | |
| CAAAGCTGCTGCTCATTTGA+AGG | + | tig0020091:29145-29164 | Msa1378600:CDS | 45.0% | |
| TCGCAGGTAGCTGAAAATAG+CGG | - | tig0020091:29676-29695 | None:intergenic | 45.0% | |
| CTACCTGCGATTGACAACAA+TGG | + | tig0020091:29686-29705 | Msa1378600:intron | 45.0% | |
| CAACCATTGTTGTCAATCGC+AGG | - | tig0020091:29692-29711 | None:intergenic | 45.0% | |
| GGCAGAAATGATGACCTTCT+TGG | - | tig0020091:29865-29884 | None:intergenic | 45.0% | |
| CATCATTTCTGCCCCTAGTA+AGG | + | tig0020091:29872-29891 | Msa1378600:CDS | 45.0% | |
| !! | ACATGGGAGCATCCTTACTA+GGG | - | tig0020091:29887-29906 | None:intergenic | 45.0% |
| !! | AACATGGGAGCATCCTTACT+AGG | - | tig0020091:29888-29907 | None:intergenic | 45.0% |
| !! | GATGCTCCCATGTTTGTTGT+TGG | + | tig0020091:29894-29913 | Msa1378600:CDS | 45.0% |
| ATACCTTAGCAAGTGGTGCA+AGG | - | tig0020091:29986-30005 | None:intergenic | 45.0% | |
| CCTCATACGGTAAACCAACA+TGG | - | tig0020091:30041-30060 | None:intergenic | 45.0% | |
| !! | CCATGTTGGTTTACCGTATG+AGG | + | tig0020091:30038-30057 | Msa1378600:intron | 45.0% |
| AACATCATTCCTAGCAGCAC+TGG | + | tig0020091:30308-30327 | Msa1378600:CDS | 45.0% | |
| TCTGTGTCTTACTAGGCTGT+TGG | + | tig0020091:30426-30445 | Msa1378600:intron | 45.0% | |
| CAACTGAGACATCCACAGTT+GGG | - | tig0020091:30503-30522 | None:intergenic | 45.0% | |
| ACAACTGAGACATCCACAGT+TGG | - | tig0020091:30504-30523 | None:intergenic | 45.0% | |
| CAGTTGTTGACCTTACAGTG+AGG | + | tig0020091:30517-30536 | Msa1378600:CDS | 45.0% | |
| ACAATGCACAGTGTTACCCT+TGG | + | tig0020091:30592-30611 | Msa1378600:intron | 45.0% | |
| !! | ACATTTCTGTTTCTGCAGGG+AGG | + | tig0020091:30665-30684 | Msa1378600:intron | 45.0% |
| !! | GATTCCTTTCAAGTTGCCCT+CGG | - | tig0020091:30694-30713 | None:intergenic | 45.0% |
| GGCAACTTGAAAGGAATCCT+TGG | + | tig0020091:30696-30715 | Msa1378600:CDS | 45.0% | |
| !! | GTCGTCTCTACCGACTTTAT+TGG | + | tig0020091:30735-30754 | Msa1378600:CDS | 45.0% |
| ! | CCGACTTTATTGGTGATACC+AGG | + | tig0020091:30745-30764 | Msa1378600:CDS | 45.0% |
| GTCAAGCATCTTTGATGCCA+AGG | + | tig0020091:30895-30914 | Msa1378600:CDS | 45.0% | |
| CTCTTGGTATGACAACGAGT+TGG | + | tig0020091:30955-30974 | Msa1378600:CDS | 45.0% | |
| ! | ATGACAACGAGTTGGGTTAC+AGG | + | tig0020091:30963-30982 | Msa1378600:CDS | 45.0% |
| ! | AATTTTCTGCAGTACCCGTG+TGG | + | tig0020091:31113-31132 | Msa1378600:intron | 45.0% |
| ! | GCCGTGGTAGTGCTATAAAT+TGG | + | tig0020091:31182-31201 | Msa1378600:three_prime_UTR | 45.0% |
| CCAAGACAACTCGTTGCTTA+TGG | - | tig0020091:31336-31355 | None:intergenic | 45.0% | |
| CCATAAGCAACGAGTTGTCT+TGG | + | tig0020091:31333-31352 | Msa1378600:three_prime_UTR | 45.0% | |
| GTGATTCGTCGTGAATTGTG+AGG | + | tig0020091:31769-31788 | Msa1378600:three_prime_UTR | 45.0% | |
| !! | AATGACTTGTTTGTGGGGGT+AGG | - | tig0020091:28113-28132 | None:intergenic | 45.0% |
| CCCATGGCTGAAAAACAAAG+AGG | - | tig0020091:28249-28268 | None:intergenic | 45.0% | |
| !!! | CTTTGTTTTTCAGCCATGGG+TGG | + | tig0020091:28249-28268 | Msa1378600:exon | 45.0% |
| GGATCAGCCAAGATCAAGAT+CGG | + | tig0020091:28389-28408 | Msa1378600:intron | 45.0% | |
| ATGACAGTGTTCACGGACAA+TGG | + | tig0020091:28758-28777 | Msa1378600:CDS | 45.0% | |
| CTGTGAGCAAAGACAGTTAC+TGG | - | tig0020091:28838-28857 | None:intergenic | 45.0% | |
| CAGTAACTGTCTTTGCTCAC+AGG | + | tig0020091:28836-28855 | Msa1378600:CDS | 45.0% | |
| GTCCTTGTCGGTAAAAACAC+CGG | - | tig0020091:29126-29145 | None:intergenic | 45.0% | |
| CAAAGCTGCTGCTCATTTGA+AGG | + | tig0020091:29145-29164 | Msa1378600:CDS | 45.0% | |
| TCGCAGGTAGCTGAAAATAG+CGG | - | tig0020091:29676-29695 | None:intergenic | 45.0% | |
| CTACCTGCGATTGACAACAA+TGG | + | tig0020091:29686-29705 | Msa1378600:intron | 45.0% | |
| CAACCATTGTTGTCAATCGC+AGG | - | tig0020091:29692-29711 | None:intergenic | 45.0% | |
| GGCAGAAATGATGACCTTCT+TGG | - | tig0020091:29865-29884 | None:intergenic | 45.0% | |
| CATCATTTCTGCCCCTAGTA+AGG | + | tig0020091:29872-29891 | Msa1378600:CDS | 45.0% | |
| !! | ACATGGGAGCATCCTTACTA+GGG | - | tig0020091:29887-29906 | None:intergenic | 45.0% |
| !! | AACATGGGAGCATCCTTACT+AGG | - | tig0020091:29888-29907 | None:intergenic | 45.0% |
| !! | GATGCTCCCATGTTTGTTGT+TGG | + | tig0020091:29894-29913 | Msa1378600:CDS | 45.0% |
| ATACCTTAGCAAGTGGTGCA+AGG | - | tig0020091:29986-30005 | None:intergenic | 45.0% | |
| CCTCATACGGTAAACCAACA+TGG | - | tig0020091:30041-30060 | None:intergenic | 45.0% | |
| !! | CCATGTTGGTTTACCGTATG+AGG | + | tig0020091:30038-30057 | Msa1378600:intron | 45.0% |
| AACATCATTCCTAGCAGCAC+TGG | + | tig0020091:30308-30327 | Msa1378600:CDS | 45.0% | |
| TCTGTGTCTTACTAGGCTGT+TGG | + | tig0020091:30426-30445 | Msa1378600:intron | 45.0% | |
| CAACTGAGACATCCACAGTT+GGG | - | tig0020091:30503-30522 | None:intergenic | 45.0% | |
| ACAACTGAGACATCCACAGT+TGG | - | tig0020091:30504-30523 | None:intergenic | 45.0% | |
| CAGTTGTTGACCTTACAGTG+AGG | + | tig0020091:30517-30536 | Msa1378600:CDS | 45.0% | |
| ACAATGCACAGTGTTACCCT+TGG | + | tig0020091:30592-30611 | Msa1378600:intron | 45.0% | |
| !! | ACATTTCTGTTTCTGCAGGG+AGG | + | tig0020091:30665-30684 | Msa1378600:intron | 45.0% |
| !! | GATTCCTTTCAAGTTGCCCT+CGG | - | tig0020091:30694-30713 | None:intergenic | 45.0% |
| GGCAACTTGAAAGGAATCCT+TGG | + | tig0020091:30696-30715 | Msa1378600:CDS | 45.0% | |
| !! | GTCGTCTCTACCGACTTTAT+TGG | + | tig0020091:30735-30754 | Msa1378600:CDS | 45.0% |
| ! | CCGACTTTATTGGTGATACC+AGG | + | tig0020091:30745-30764 | Msa1378600:CDS | 45.0% |
| GTCAAGCATCTTTGATGCCA+AGG | + | tig0020091:30895-30914 | Msa1378600:CDS | 45.0% | |
| CTCTTGGTATGACAACGAGT+TGG | + | tig0020091:30955-30974 | Msa1378600:CDS | 45.0% | |
| ! | ATGACAACGAGTTGGGTTAC+AGG | + | tig0020091:30963-30982 | Msa1378600:CDS | 45.0% |
| ! | AATTTTCTGCAGTACCCGTG+TGG | + | tig0020091:31113-31132 | Msa1378600:intron | 45.0% |
| ! | GCCGTGGTAGTGCTATAAAT+TGG | + | tig0020091:31182-31201 | Msa1378600:three_prime_UTR | 45.0% |
| CCAAGACAACTCGTTGCTTA+TGG | - | tig0020091:31336-31355 | None:intergenic | 45.0% | |
| CCATAAGCAACGAGTTGTCT+TGG | + | tig0020091:31333-31352 | Msa1378600:three_prime_UTR | 45.0% | |
| GTGATTCGTCGTGAATTGTG+AGG | + | tig0020091:31769-31788 | Msa1378600:three_prime_UTR | 45.0% | |
| ! | GGTAGGTCAAGTTTGGTTCC+GGG | - | tig0020091:28096-28115 | None:intergenic | 50.0% |
| ! | GGGTAGGTCAAGTTTGGTTC+CGG | - | tig0020091:28097-28116 | None:intergenic | 50.0% |
| TTGTGGGGGTAGGTCAAGTT+TGG | - | tig0020091:28103-28122 | None:intergenic | 50.0% | |
| !! | TGTTTTTCAGCCATGGGTGG+TGG | + | tig0020091:28252-28271 | Msa1378600:exon | 50.0% |
| TGGCTTCTGACCGAAGAGAA+GGG | - | tig0020091:28818-28837 | None:intergenic | 50.0% | |
| GAACCCAGAAGAGATCCCAT+GGG | + | tig0020091:29067-29086 | Msa1378600:CDS | 50.0% | |
| TAGCCCATGGGATCTCTTCT+GGG | - | tig0020091:29073-29092 | None:intergenic | 50.0% | |
| CTTGTCGGTAAAAACACCGG+TGG | - | tig0020091:29123-29142 | None:intergenic | 50.0% | |
| !! | CACCGGTGTTTTTACCGACA+AGG | + | tig0020091:29121-29140 | Msa1378600:CDS | 50.0% |
| ! | AGCAGCAGCTTTGTCCTTGT+CGG | - | tig0020091:29138-29157 | None:intergenic | 50.0% |
| GCTATGCTGCTATTGCGTAG+CGG | + | tig0020091:29541-29560 | Msa1378600:intron | 50.0% | |
| !! | TGCTATTGCGTAGCGGACTT+TGG | + | tig0020091:29548-29567 | Msa1378600:intron | 50.0% |
| ! | AATCTAGGGTGGTGCCAAGA+AGG | + | tig0020091:29848-29867 | Msa1378600:intron | 50.0% |
| !! | CATGGGAGCATCCTTACTAG+GGG | - | tig0020091:29886-29905 | None:intergenic | 50.0% |
| !! | GTTGGTAGTGCAGCTAGCAT+TGG | - | tig0020091:29961-29980 | None:intergenic | 50.0% |
| CCACCCAGAAGACTGTTGAT+GGG | + | tig0020091:30243-30262 | Msa1378600:CDS | 50.0% | |
| TGGCCCATCAACAGTCTTCT+GGG | - | tig0020091:30249-30268 | None:intergenic | 50.0% | |
| ATGGCCCATCAACAGTCTTC+TGG | - | tig0020091:30250-30269 | None:intergenic | 50.0% | |
| TCTTCCACCTCTCCAGTCTT+TGG | - | tig0020091:30276-30295 | None:intergenic | 50.0% | |
| AGACATCCACAGTTGGGACA+CGG | - | tig0020091:30497-30516 | None:intergenic | 50.0% | |
| AGGAATCCTTGGTTACACCG+AGG | + | tig0020091:30707-30726 | Msa1378600:CDS | 50.0% | |
| !! | CAGTCTAGAAGTGTTCACGC+TGG | + | tig0020091:30787-30806 | Msa1378600:intron | 50.0% |
| !! | TCTAGAAGTGTTCACGCTGG+TGG | + | tig0020091:30790-30809 | Msa1378600:intron | 50.0% |
| GGCATCAAAGATGCTTGACC+TGG | - | tig0020091:30894-30913 | None:intergenic | 50.0% | |
| AGCATCTTTGATGCCAAGGC+AGG | + | tig0020091:30899-30918 | Msa1378600:CDS | 50.0% | |
| AACGATGAGGTCAACCACAC+GGG | - | tig0020091:31130-31149 | None:intergenic | 50.0% | |
| GAACGATGAGGTCAACCACA+CGG | - | tig0020091:31131-31150 | None:intergenic | 50.0% | |
| ! | CTATTAGCCTAGCAGCCGTT+AGG | + | tig0020091:31227-31246 | Msa1378600:three_prime_UTR | 50.0% |
| ! | AAGGGGCAAGCTTCAAGTTC+AGG | - | tig0020091:31282-31301 | None:intergenic | 50.0% |
| ! | GGTAGGTCAAGTTTGGTTCC+GGG | - | tig0020091:28096-28115 | None:intergenic | 50.0% |
| ! | GGGTAGGTCAAGTTTGGTTC+CGG | - | tig0020091:28097-28116 | None:intergenic | 50.0% |
| TTGTGGGGGTAGGTCAAGTT+TGG | - | tig0020091:28103-28122 | None:intergenic | 50.0% | |
| !! | TGTTTTTCAGCCATGGGTGG+TGG | + | tig0020091:28252-28271 | Msa1378600:exon | 50.0% |
| TGGCTTCTGACCGAAGAGAA+GGG | - | tig0020091:28818-28837 | None:intergenic | 50.0% | |
| GAACCCAGAAGAGATCCCAT+GGG | + | tig0020091:29067-29086 | Msa1378600:CDS | 50.0% | |
| TAGCCCATGGGATCTCTTCT+GGG | - | tig0020091:29073-29092 | None:intergenic | 50.0% | |
| CTTGTCGGTAAAAACACCGG+TGG | - | tig0020091:29123-29142 | None:intergenic | 50.0% | |
| !! | CACCGGTGTTTTTACCGACA+AGG | + | tig0020091:29121-29140 | Msa1378600:CDS | 50.0% |
| ! | AGCAGCAGCTTTGTCCTTGT+CGG | - | tig0020091:29138-29157 | None:intergenic | 50.0% |
| GCTATGCTGCTATTGCGTAG+CGG | + | tig0020091:29541-29560 | Msa1378600:intron | 50.0% | |
| !! | TGCTATTGCGTAGCGGACTT+TGG | + | tig0020091:29548-29567 | Msa1378600:intron | 50.0% |
| ! | AATCTAGGGTGGTGCCAAGA+AGG | + | tig0020091:29848-29867 | Msa1378600:intron | 50.0% |
| !! | CATGGGAGCATCCTTACTAG+GGG | - | tig0020091:29886-29905 | None:intergenic | 50.0% |
| !! | GTTGGTAGTGCAGCTAGCAT+TGG | - | tig0020091:29961-29980 | None:intergenic | 50.0% |
| CCACCCAGAAGACTGTTGAT+GGG | + | tig0020091:30243-30262 | Msa1378600:CDS | 50.0% | |
| TGGCCCATCAACAGTCTTCT+GGG | - | tig0020091:30249-30268 | None:intergenic | 50.0% | |
| ATGGCCCATCAACAGTCTTC+TGG | - | tig0020091:30250-30269 | None:intergenic | 50.0% | |
| TCTTCCACCTCTCCAGTCTT+TGG | - | tig0020091:30276-30295 | None:intergenic | 50.0% | |
| AGACATCCACAGTTGGGACA+CGG | - | tig0020091:30497-30516 | None:intergenic | 50.0% | |
| AGGAATCCTTGGTTACACCG+AGG | + | tig0020091:30707-30726 | Msa1378600:CDS | 50.0% | |
| !! | CAGTCTAGAAGTGTTCACGC+TGG | + | tig0020091:30787-30806 | Msa1378600:intron | 50.0% |
| !! | TCTAGAAGTGTTCACGCTGG+TGG | + | tig0020091:30790-30809 | Msa1378600:intron | 50.0% |
| GGCATCAAAGATGCTTGACC+TGG | - | tig0020091:30894-30913 | None:intergenic | 50.0% | |
| AGCATCTTTGATGCCAAGGC+AGG | + | tig0020091:30899-30918 | Msa1378600:CDS | 50.0% | |
| AACGATGAGGTCAACCACAC+GGG | - | tig0020091:31130-31149 | None:intergenic | 50.0% | |
| GAACGATGAGGTCAACCACA+CGG | - | tig0020091:31131-31150 | None:intergenic | 50.0% | |
| ! | CTATTAGCCTAGCAGCCGTT+AGG | + | tig0020091:31227-31246 | Msa1378600:three_prime_UTR | 50.0% |
| ! | AAGGGGCAAGCTTCAAGTTC+AGG | - | tig0020091:31282-31301 | None:intergenic | 50.0% |
| CTGGCTTCTGACCGAAGAGA+AGG | - | tig0020091:28819-28838 | None:intergenic | 55.0% | |
| GGAACCCAGAAGAGATCCCA+TGG | + | tig0020091:29066-29085 | Msa1378600:intron | 55.0% | |
| CTAGCCCATGGGATCTCTTC+TGG | - | tig0020091:29074-29093 | None:intergenic | 55.0% | |
| AGCAAGTGGTGCAAGGCAGT+TGG | - | tig0020091:29979-29998 | None:intergenic | 55.0% | |
| ! | CTGCCTTGCACCACTTGCTA+AGG | + | tig0020091:29980-29999 | Msa1378600:CDS | 55.0% |
| CAGTCTTCTGGGTGGCTGAT+TGG | - | tig0020091:30238-30257 | None:intergenic | 55.0% | |
| GCCACCCAGAAGACTGTTGA+TGG | + | tig0020091:30242-30261 | Msa1378600:intron | 55.0% | |
| CCCATCAACAGTCTTCTGGG+TGG | - | tig0020091:30246-30265 | None:intergenic | 55.0% | |
| ATGGGCCATCAGCCAAAGAC+TGG | + | tig0020091:30261-30280 | Msa1378600:CDS | 55.0% | |
| CCTCTCCAGTCTTTGGCTGA+TGG | - | tig0020091:30269-30288 | None:intergenic | 55.0% | |
| CCATCAGCCAAAGACTGGAG+AGG | + | tig0020091:30266-30285 | Msa1378600:CDS | 55.0% | |
| TCAGCCAAAGACTGGAGAGG+TGG | + | tig0020091:30269-30288 | Msa1378600:CDS | 55.0% | |
| ! | TTAGCAGCTCCAGTGCTGCT+AGG | - | tig0020091:30320-30339 | None:intergenic | 55.0% |
| CCTTCTCGAGCCTCACTGTA+AGG | - | tig0020091:30530-30549 | None:intergenic | 55.0% | |
| CCTTACAGTGAGGCTCGAGA+AGG | + | tig0020091:30527-30546 | Msa1378600:CDS | 55.0% | |
| GAGTCCGAGGGCAACTTGAA+AGG | + | tig0020091:30687-30706 | Msa1378600:CDS | 55.0% | |
| ! | CATCGTCCTCGGTGTAACCA+AGG | - | tig0020091:30716-30735 | None:intergenic | 55.0% |
| GGTAGAGACGACATCGTCCT+CGG | - | tig0020091:30727-30746 | None:intergenic | 55.0% | |
| AAAGAGGCCTAACGGCTGCT+AGG | - | tig0020091:31237-31256 | None:intergenic | 55.0% | |
| CTGGCTTCTGACCGAAGAGA+AGG | - | tig0020091:28819-28838 | None:intergenic | 55.0% | |
| GGAACCCAGAAGAGATCCCA+TGG | + | tig0020091:29066-29085 | Msa1378600:intron | 55.0% | |
| CTAGCCCATGGGATCTCTTC+TGG | - | tig0020091:29074-29093 | None:intergenic | 55.0% | |
| AGCAAGTGGTGCAAGGCAGT+TGG | - | tig0020091:29979-29998 | None:intergenic | 55.0% | |
| ! | CTGCCTTGCACCACTTGCTA+AGG | + | tig0020091:29980-29999 | Msa1378600:CDS | 55.0% |
| CAGTCTTCTGGGTGGCTGAT+TGG | - | tig0020091:30238-30257 | None:intergenic | 55.0% | |
| GCCACCCAGAAGACTGTTGA+TGG | + | tig0020091:30242-30261 | Msa1378600:intron | 55.0% | |
| CCCATCAACAGTCTTCTGGG+TGG | - | tig0020091:30246-30265 | None:intergenic | 55.0% | |
| ATGGGCCATCAGCCAAAGAC+TGG | + | tig0020091:30261-30280 | Msa1378600:CDS | 55.0% | |
| CCTCTCCAGTCTTTGGCTGA+TGG | - | tig0020091:30269-30288 | None:intergenic | 55.0% | |
| CCATCAGCCAAAGACTGGAG+AGG | + | tig0020091:30266-30285 | Msa1378600:CDS | 55.0% | |
| TCAGCCAAAGACTGGAGAGG+TGG | + | tig0020091:30269-30288 | Msa1378600:CDS | 55.0% | |
| ! | TTAGCAGCTCCAGTGCTGCT+AGG | - | tig0020091:30320-30339 | None:intergenic | 55.0% |
| CCTTCTCGAGCCTCACTGTA+AGG | - | tig0020091:30530-30549 | None:intergenic | 55.0% | |
| CCTTACAGTGAGGCTCGAGA+AGG | + | tig0020091:30527-30546 | Msa1378600:CDS | 55.0% | |
| GAGTCCGAGGGCAACTTGAA+AGG | + | tig0020091:30687-30706 | Msa1378600:CDS | 55.0% | |
| ! | CATCGTCCTCGGTGTAACCA+AGG | - | tig0020091:30716-30735 | None:intergenic | 55.0% |
| GGTAGAGACGACATCGTCCT+CGG | - | tig0020091:30727-30746 | None:intergenic | 55.0% | |
| AAAGAGGCCTAACGGCTGCT+AGG | - | tig0020091:31237-31256 | None:intergenic | 55.0% | |
| !! | GAGATCCCATGGGCTAGCAC+TGG | + | tig0020091:29077-29096 | Msa1378600:CDS | 60.0% |
| CAGCACCAGTGCTAGCCCAT+GGG | - | tig0020091:29085-29104 | None:intergenic | 60.0% | |
| TCAGCACCAGTGCTAGCCCA+TGG | - | tig0020091:29086-29105 | None:intergenic | 60.0% | |
| GGCATTCCGTGTCCCAACTG+TGG | + | tig0020091:30488-30507 | Msa1378600:CDS | 60.0% | |
| TTTCTGCAGGGAGGAGTCCG+AGG | + | tig0020091:30674-30693 | Msa1378600:intron | 60.0% | |
| TTCTGCAGGGAGGAGTCCGA+GGG | + | tig0020091:30675-30694 | Msa1378600:intron | 60.0% | |
| !! | GAGATCCCATGGGCTAGCAC+TGG | + | tig0020091:29077-29096 | Msa1378600:CDS | 60.0% |
| CAGCACCAGTGCTAGCCCAT+GGG | - | tig0020091:29085-29104 | None:intergenic | 60.0% | |
| TCAGCACCAGTGCTAGCCCA+TGG | - | tig0020091:29086-29105 | None:intergenic | 60.0% | |
| GGCATTCCGTGTCCCAACTG+TGG | + | tig0020091:30488-30507 | Msa1378600:CDS | 60.0% | |
| TTTCTGCAGGGAGGAGTCCG+AGG | + | tig0020091:30674-30693 | Msa1378600:intron | 60.0% | |
| TTCTGCAGGGAGGAGTCCGA+GGG | + | tig0020091:30675-30694 | Msa1378600:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020091 | gene | 28077 | 31894 | 28077 | ID=Msa1378600;Name=Msa1378600 |
| tig0020091 | mRNA | 28077 | 31894 | 28077 | ID=Msa1378600-mRNA-1;Parent=Msa1378600;Name=Msa1378600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=187|1|1|1|0.81|0.91|12|724|339 |
| tig0020091 | exon | 28077 | 28273 | 28077 | ID=Msa1378600-mRNA-1:exon:6099;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 28396 | 28419 | 28396 | ID=Msa1378600-mRNA-1:exon:6100;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 28533 | 28633 | 28533 | ID=Msa1378600-mRNA-1:exon:6101;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 28742 | 28857 | 28742 | ID=Msa1378600-mRNA-1:exon:6102;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 29067 | 29166 | 29067 | ID=Msa1378600-mRNA-1:exon:6103;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 29855 | 30001 | 29855 | ID=Msa1378600-mRNA-1:exon:6104;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 30093 | 30153 | 30093 | ID=Msa1378600-mRNA-1:exon:6105;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 30243 | 30340 | 30243 | ID=Msa1378600-mRNA-1:exon:6106;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 30441 | 30583 | 30441 | ID=Msa1378600-mRNA-1:exon:6107;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 30683 | 30766 | 30683 | ID=Msa1378600-mRNA-1:exon:6108;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 30895 | 30984 | 30895 | ID=Msa1378600-mRNA-1:exon:6109;Parent=Msa1378600-mRNA-1 |
| tig0020091 | exon | 31125 | 31894 | 31125 | ID=Msa1378600-mRNA-1:exon:6110;Parent=Msa1378600-mRNA-1 |
| tig0020091 | five_prime_UTR | 28077 | 28263 | 28077 | ID=Msa1378600-mRNA-1:five_prime_utr;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 28264 | 28273 | 28264 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 28396 | 28419 | 28396 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 28533 | 28633 | 28533 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 28742 | 28857 | 28742 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 29067 | 29166 | 29067 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 29855 | 30001 | 29855 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 30093 | 30153 | 30093 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 30243 | 30340 | 30243 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 30441 | 30583 | 30441 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 30683 | 30766 | 30683 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 30895 | 30984 | 30895 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | CDS | 31125 | 31170 | 31125 | ID=Msa1378600-mRNA-1:cds;Parent=Msa1378600-mRNA-1 |
| tig0020091 | three_prime_UTR | 31171 | 31894 | 31171 | ID=Msa1378600-mRNA-1:three_prime_utr;Parent=Msa1378600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
