Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208650 | XP_003608875.1 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208650 | sp|P34922|G3PC_PEA | 97.923 | 337 | 7 | 0 | 3 | 339 | 2 | 338 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208650 | G7JML2 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042980 | Msa1208650 | 0.804404 | 2.195891e-49 | -8.615850e-47 |
| Msa0063350 | Msa1208650 | 0.819119 | 1.372691e-52 | -8.615850e-47 |
| Msa0068740 | Msa1208650 | 0.826747 | 2.289861e-54 | -8.615850e-47 |
| Msa0825240 | Msa1208650 | 0.805580 | 1.246315e-49 | -8.615850e-47 |
| Msa0827350 | Msa1208650 | 0.804273 | 2.338283e-49 | -8.615850e-47 |
| Msa0125640 | Msa1208650 | 0.828043 | 1.119668e-54 | -8.615850e-47 |
| Msa0134110 | Msa1208650 | 0.803075 | 4.144344e-49 | -8.615850e-47 |
| Msa0136890 | Msa1208650 | 0.806598 | 7.611461e-50 | -8.615850e-47 |
| Msa0140500 | Msa1208650 | 0.803976 | 2.696123e-49 | -8.615850e-47 |
| Msa0170110 | Msa1208650 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa0180990 | Msa1208650 | 0.805336 | 1.402358e-49 | -8.615850e-47 |
| Msa0381600 | Msa1208650 | 0.826468 | 2.668124e-54 | -8.615850e-47 |
| Msa0381610 | Msa1208650 | 0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0383400 | Msa1208650 | 0.825102 | 5.629528e-54 | -8.615850e-47 |
| Msa0389610 | Msa1208650 | 0.825286 | 5.093338e-54 | -8.615850e-47 |
| Msa0392040 | Msa1208650 | 0.811220 | 7.806777e-51 | -8.615850e-47 |
| Msa0461790 | Msa1208650 | -0.803062 | 4.170506e-49 | -8.615850e-47 |
| Msa0482150 | Msa1208650 | 0.888510 | 5.536906e-73 | -8.615850e-47 |
| Msa0999960 | Msa1208650 | 0.845143 | 4.879010e-59 | -8.615850e-47 |
| Msa1029080 | Msa1208650 | 0.860215 | 2.411908e-63 | -8.615850e-47 |
| Msa1033410 | Msa1208650 | 0.812511 | 4.086724e-51 | -8.615850e-47 |
| Msa1073070 | Msa1208650 | 0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa1100130 | Msa1208650 | 0.803107 | 4.082663e-49 | -8.615850e-47 |
| Msa0263580 | Msa1208650 | 0.814012 | 1.913074e-51 | -8.615850e-47 |
| Msa0279210 | Msa1208650 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa0281480 | Msa1208650 | -0.801248 | 9.848384e-49 | -8.615850e-47 |
| Msa0306210 | Msa1208650 | 0.817119 | 3.889588e-52 | -8.615850e-47 |
| Msa0318970 | Msa1208650 | 0.807672 | 4.508123e-50 | -8.615850e-47 |
| Msa1131670 | Msa1208650 | 0.829470 | 5.057570e-55 | -8.615850e-47 |
| Msa1156170 | Msa1208650 | 0.858398 | 8.467390e-63 | -8.615850e-47 |
| Msa1191050 | Msa1208650 | 0.803585 | 3.249470e-49 | -8.615850e-47 |
| Msa1207470 | Msa1208650 | 0.841759 | 3.909725e-58 | -8.615850e-47 |
| Msa1208650 | Msa1224580 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa1208650 | Msa1257800 | 0.859228 | 4.782183e-63 | -8.615850e-47 |
| Msa1208650 | Msa1317480 | 0.825175 | 5.410151e-54 | -8.615850e-47 |
| Msa1208650 | Msa1325860 | 0.845704 | 3.439996e-59 | -8.615850e-47 |
| Msa1208650 | Msa1378600 | 0.892327 | 1.759053e-74 | -8.615850e-47 |
| Msa1208650 | Msa1381540 | -0.822680 | 2.081194e-53 | -8.615850e-47 |
| Msa1208650 | Msa1387590 | -0.846109 | 2.669056e-59 | -8.615850e-47 |
| Msa1208650 | Msa1404240 | 0.831854 | 1.318453e-55 | -8.615850e-47 |
| Msa1208650 | Msa1406110 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa1208650 | Msa1449340 | 0.810152 | 1.328611e-50 | -8.615850e-47 |
| Msa1208650 | Msa1453560 | -0.801041 | 1.085583e-48 | -8.615850e-47 |
| Msa0521620 | Msa1208650 | -0.839929 | 1.180531e-57 | -8.615850e-47 |
| Msa0528610 | Msa1208650 | 0.807937 | 3.960722e-50 | -8.615850e-47 |
| Msa0864470 | Msa1208650 | 0.818274 | 2.134635e-52 | -8.615850e-47 |
| Msa0942550 | Msa1208650 | 0.828024 | 1.131455e-54 | -8.615850e-47 |
| Msa0942560 | Msa1208650 | 0.806316 | 8.729038e-50 | -8.615850e-47 |
| Msa0946280 | Msa1208650 | 0.807299 | 5.408703e-50 | -8.615850e-47 |
| Msa0946690 | Msa1208650 | 0.860490 | 1.991662e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208650 | MtrunA17_Chr4g0057861 | 99.410 | 339 | 2 | 0 | 1 | 339 | 1 | 339 | 0.0 | 686 |
| Msa1208650 | MtrunA17_Chr6g0458861 | 85.586 | 333 | 48 | 0 | 4 | 336 | 2 | 334 | 0.0 | 590 |
| Msa1208650 | MtrunA17_Chr3g0122971 | 84.639 | 332 | 30 | 1 | 5 | 336 | 6 | 316 | 0.0 | 573 |
| Msa1208650 | MtrunA17_Chr2g0310421 | 71.386 | 332 | 94 | 1 | 5 | 336 | 82 | 412 | 7.72e-175 | 491 |
| Msa1208650 | MtrunA17_Chr8g0357071 | 81.673 | 251 | 32 | 4 | 86 | 324 | 59 | 307 | 1.26e-137 | 393 |
| Msa1208650 | MtrunA17_Chr3g0144151 | 48.680 | 341 | 166 | 7 | 4 | 338 | 84 | 421 | 3.33e-89 | 275 |
| Msa1208650 | MtrunA17_Chr8g0360951 | 87.838 | 148 | 9 | 2 | 179 | 326 | 1 | 139 | 7.57e-84 | 249 |
| Msa1208650 | MtrunA17_Chr7g0252641 | 47.130 | 331 | 169 | 5 | 4 | 331 | 68 | 395 | 2.90e-83 | 258 |
| Msa1208650 | MtrunA17_Chr2g0316821 | 83.673 | 49 | 8 | 0 | 219 | 267 | 7 | 55 | 1.17e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208650 | AT3G04120.1 | 88.427 | 337 | 39 | 0 | 1 | 337 | 1 | 337 | 0.0 | 617 |
| Msa1208650 | AT1G13440.1 | 87.834 | 337 | 41 | 0 | 1 | 337 | 1 | 337 | 0.0 | 613 |
| Msa1208650 | AT1G13440.2 | 80.712 | 337 | 37 | 1 | 1 | 337 | 1 | 309 | 0.0 | 545 |
| Msa1208650 | AT1G79530.1 | 73.494 | 332 | 87 | 1 | 5 | 336 | 86 | 416 | 1.32e-179 | 504 |
| Msa1208650 | AT1G16300.1 | 72.892 | 332 | 89 | 1 | 5 | 336 | 84 | 414 | 4.42e-177 | 497 |
| Msa1208650 | AT1G42970.1 | 47.507 | 341 | 170 | 7 | 4 | 338 | 80 | 417 | 1.06e-91 | 281 |
| Msa1208650 | AT1G12900.3 | 48.640 | 331 | 164 | 5 | 4 | 331 | 14 | 341 | 8.71e-88 | 268 |
| Msa1208650 | AT1G12900.4 | 48.640 | 331 | 164 | 5 | 4 | 331 | 14 | 341 | 8.71e-88 | 268 |
| Msa1208650 | AT1G12900.1 | 48.640 | 331 | 164 | 5 | 4 | 331 | 63 | 390 | 3.92e-87 | 268 |
| Msa1208650 | AT1G12900.5 | 48.640 | 331 | 164 | 5 | 4 | 331 | 105 | 432 | 7.30e-87 | 268 |
| Msa1208650 | AT3G26650.1 | 47.432 | 331 | 168 | 5 | 4 | 331 | 60 | 387 | 4.17e-85 | 263 |
| Msa1208650 | AT1G12900.2 | 53.361 | 238 | 109 | 2 | 95 | 331 | 72 | 308 | 3.30e-70 | 222 |
Find 132 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTTACCGGATTTAATT+TGG | 0.089951 | 8_1:-66861729 | Msa1208650:three_prime_UTR |
| CTTAACAAAATTGTCATTTA+AGG | 0.104366 | 8_1:+66862165 | None:intergenic |
| AGATATGTTTCTTACTAAAT+TGG | 0.164625 | 8_1:+66861197 | None:intergenic |
| ATGGCCCATCAACAGTCTTC+TGG | 0.178049 | 8_1:+66862846 | None:intergenic |
| CTAGCCCATGGGATCTCTTC+TGG | 0.197666 | 8_1:+66864022 | None:intergenic |
| AAATGAAAAGTCTGCAATTT+TGG | 0.214398 | 8_1:-66861573 | Msa1208650:three_prime_UTR |
| GAAGAAATGAAATGAGAAAT+AGG | 0.224747 | 8_1:+66864940 | None:intergenic |
| TCTTCCACCTCTCCAGTCTT+TGG | 0.239282 | 8_1:+66862820 | None:intergenic |
| CCATAAGCAACGAGTTGTTT+TGG | 0.281284 | 8_1:-66861759 | Msa1208650:three_prime_UTR |
| TAGGTTATCAATGACAGATT+TGG | 0.312865 | 8_1:-66863003 | Msa1208650:CDS |
| CCAAAACAACTCGTTGCTTA+TGG | 0.323330 | 8_1:+66861759 | None:intergenic |
| GGGTAGGTCAAGTTTGGTTC+CGG | 0.332740 | 8_1:+66865004 | None:intergenic |
| GCATTTACCGGATTTAATTT+GGG | 0.345001 | 8_1:-66861728 | Msa1208650:three_prime_UTR |
| GGTAGGTCAAGTTTGGTTCC+GGG | 0.358342 | 8_1:+66865005 | None:intergenic |
| GTTGATTCCGATCTTGATCT+TGG | 0.361687 | 8_1:+66864702 | None:intergenic |
| CTGTGAGCAAAGACAGTTAC+TGG | 0.361869 | 8_1:+66864257 | None:intergenic |
| TAGCCCATGGGATCTCTTCT+GGG | 0.364602 | 8_1:+66864023 | None:intergenic |
| CGTGACTTGTATGATCTCTA+TGG | 0.365089 | 8_1:-66861492 | Msa1208650:three_prime_UTR |
| GGCAGAAATGATGACCTTCT+TGG | 0.370496 | 8_1:+66863231 | None:intergenic |
| AAAACACTACGGTTCAATAA+GGG | 0.372319 | 8_1:+66861795 | None:intergenic |
| TGGCCCATCAACAGTCTTCT+GGG | 0.376977 | 8_1:+66862847 | None:intergenic |
| GTCGTCTCTACCGACTTTAT+TGG | 0.379304 | 8_1:-66862358 | Msa1208650:CDS |
| TAAAATAATGACTTGTTTGT+GGG | 0.385398 | 8_1:+66864982 | None:intergenic |
| ATGACAACGAGTTGGGTTAC+AGG | 0.391838 | 8_1:-66862129 | Msa1208650:intron |
| AGCAGCTTTGATTTGATCAT+AGG | 0.392271 | 8_1:+66862537 | None:intergenic |
| AAGGGGCAAGCTTCAAGTTC+AGG | 0.394337 | 8_1:+66861813 | None:intergenic |
| CAAAGCTGCTGCTCATTTGA+AGG | 0.396278 | 8_1:-66863948 | Msa1208650:intron |
| CATGGCGTATATGTGAAACT+TGG | 0.413845 | 8_1:+66861687 | None:intergenic |
| ATTTGGAAGAATCGGACGTT+TGG | 0.417594 | 8_1:-66864564 | Msa1208650:CDS |
| GCCGTGGTAGTGCTATAAAT+TGG | 0.427633 | 8_1:-66861910 | Msa1208650:three_prime_UTR |
| AACATGGGAGCATCCTTACT+AGG | 0.429169 | 8_1:+66863208 | None:intergenic |
| CCTCTCCAGTCTTTGGCTGA+TGG | 0.430890 | 8_1:+66862827 | None:intergenic |
| ATTTAAGGCAATTCCTGCCT+TGG | 0.435729 | 8_1:+66862180 | None:intergenic |
| CATCATTTCTGCCCCTAGTA+AGG | 0.438346 | 8_1:-66863221 | Msa1208650:CDS |
| ATAAAATAATGACTTGTTTG+TGG | 0.448595 | 8_1:+66864981 | None:intergenic |
| AGCAGCAGCTTTGTCCTTGT+CGG | 0.451014 | 8_1:+66863958 | None:intergenic |
| GACTCTAAAACCCTTCTCTT+CGG | 0.451972 | 8_1:-66864287 | Msa1208650:CDS |
| ATTATCACCCAAATTAAATC+CGG | 0.452564 | 8_1:+66861721 | None:intergenic |
| GACAGATTTGGCATTGTTGA+GGG | 0.455882 | 8_1:-66862991 | Msa1208650:CDS |
| AAAGAACGATGATGAGTAGA+AGG | 0.455958 | 8_1:+66864912 | None:intergenic |
| GATGCTCCCATGTTTGTTGT+TGG | 0.458991 | 8_1:-66863199 | Msa1208650:CDS |
| ATGGGCCATCAGCCAAAGAC+TGG | 0.460505 | 8_1:-66862832 | Msa1208650:CDS |
| TTTCATCACCACTGATTACA+TGG | 0.466658 | 8_1:-66864486 | Msa1208650:intron |
| GCCACCCAGAAGACTGTTGA+TGG | 0.469781 | 8_1:-66862851 | Msa1208650:CDS |
| TCTTGGTATGACAACGAGTT+GGG | 0.473725 | 8_1:-66862136 | Msa1208650:CDS |
| AAAGTGCTTCCTGCTTTGAA+TGG | 0.474900 | 8_1:-66862643 | Msa1208650:CDS |
| TTTAAGTATGACAGTGTTCA+CGG | 0.475837 | 8_1:-66864341 | Msa1208650:CDS |
| CTGACAGGATTTGGAAGAAT+CGG | 0.477978 | 8_1:-66864572 | Msa1208650:intron |
| AAGAAATGAAATGAGAAATA+GGG | 0.480244 | 8_1:+66864941 | None:intergenic |
| AAGCATCAGATGAGATGAAA+GGG | 0.480271 | 8_1:+66861259 | None:intergenic |
| GCTTTGAATGGAAAGTTGAC+TGG | 0.484568 | 8_1:-66862631 | Msa1208650:CDS |
| TAGAGAGAGTAGAGTGATAG+CGG | 0.489639 | 8_1:+66864889 | None:intergenic |
| CTCTTGGTATGACAACGAGT+TGG | 0.490488 | 8_1:-66862137 | Msa1208650:CDS |
| CCTTCTCGAGCCTCACTGTA+AGG | 0.498253 | 8_1:+66862566 | None:intergenic |
| GGCAACTTGAAAGGAATCCT+TGG | 0.503097 | 8_1:-66862397 | Msa1208650:CDS |
| AACATCATTCCTAGCAGCAC+TGG | 0.508273 | 8_1:-66862785 | Msa1208650:CDS |
| CAGTAACTGTCTTTGCTCAC+AGG | 0.512766 | 8_1:-66864256 | Msa1208650:intron |
| AGCATCTTTGATGCCAAGGC+AGG | 0.515199 | 8_1:-66862193 | Msa1208650:CDS |
| ACATGGGAGCATCCTTACTA+GGG | 0.515453 | 8_1:+66863209 | None:intergenic |
| CTGGCTTCTGACCGAAGAGA+AGG | 0.515502 | 8_1:+66864276 | None:intergenic |
| GTCAACTTTCCATTCAAAGC+AGG | 0.517781 | 8_1:+66862634 | None:intergenic |
| GATTCCTTTCAAGTTGCCCT+CGG | 0.519543 | 8_1:+66862402 | None:intergenic |
| TGACAGATTTGGCATTGTTG+AGG | 0.526967 | 8_1:-66862992 | Msa1208650:CDS |
| TCTGTGTCTTACTAGGCTGT+TGG | 0.529290 | 8_1:-66862667 | Msa1208650:intron |
| GTCAAGCATCTTTGATGCCA+AGG | 0.530071 | 8_1:-66862197 | Msa1208650:CDS |
| CTGCCTTGCACCACTTGCTA+AGG | 0.531519 | 8_1:-66863113 | Msa1208650:intron |
| CCGACTTTATTGGTGATACC+AGG | 0.534272 | 8_1:-66862348 | Msa1208650:intron |
| GAGTCCGAGGGCAACTTGAA+AGG | 0.535557 | 8_1:-66862406 | Msa1208650:CDS |
| GTTGGTAGTGCAGCTAGCAT+TGG | 0.535726 | 8_1:+66863135 | None:intergenic |
| ACCACTGTTCATTCTATCAC+TGG | 0.537052 | 8_1:-66862961 | Msa1208650:intron |
| CTTTCTATAGCTTTATTACG+TGG | 0.539940 | 8_1:-66861239 | Msa1208650:three_prime_UTR |
| TTTCTGCAGGGAGGAGTCCG+AGG | 0.540118 | 8_1:-66862419 | Msa1208650:intron |
| AAAGAGGCCTAACGGCTGCT+AGG | 0.542903 | 8_1:+66861858 | None:intergenic |
| CAACTGAGACATCCACAGTT+GGG | 0.550377 | 8_1:+66862593 | None:intergenic |
| GAGATCCCATGGGCTAGCAC+TGG | 0.550739 | 8_1:-66864016 | Msa1208650:CDS |
| AGCTTTGATTTGATCATAGG+TGG | 0.553575 | 8_1:+66862540 | None:intergenic |
| ATGACAGTGTTCACGGACAA+TGG | 0.557529 | 8_1:-66864334 | Msa1208650:CDS |
| AATCTAGGGTGGTGCCAAGA+AGG | 0.565778 | 8_1:-66863245 | Msa1208650:intron |
| AAAGCATCAGATGAGATGAA+AGG | 0.565850 | 8_1:+66861258 | None:intergenic |
| TGAATAATTACCACCACCCA+TGG | 0.568534 | 8_1:+66864836 | None:intergenic |
| ACAACTGAGACATCCACAGT+TGG | 0.572472 | 8_1:+66862592 | None:intergenic |
| TCAGCACCAGTGCTAGCCCA+TGG | 0.575207 | 8_1:+66864010 | None:intergenic |
| TTAGCAGCTCCAGTGCTGCT+AGG | 0.576093 | 8_1:+66862776 | None:intergenic |
| GAATGGAAAGTTGACTGGAA+TGG | 0.578821 | 8_1:-66862626 | Msa1208650:CDS |
| AAAATAATGACTTGTTTGTG+GGG | 0.578904 | 8_1:+66864983 | None:intergenic |
| ATGTAATCAGTGGTGATGAA+AGG | 0.581417 | 8_1:+66864488 | None:intergenic |
| AGCAAGTGGTGCAAGGCAGT+TGG | 0.584713 | 8_1:+66863117 | None:intergenic |
| AAACACTACGGTTCAATAAG+GGG | 0.585174 | 8_1:+66861796 | None:intergenic |
| GGATCAGCCAAGATCAAGAT+CGG | 0.587412 | 8_1:-66864709 | Msa1208650:intron |
| TTGGAGATGATATCAAACTC+TGG | 0.587916 | 8_1:+66863154 | None:intergenic |
| GTTAACACCAACAACAAACA+TGG | 0.591563 | 8_1:+66863192 | None:intergenic |
| GGAACCCAGAAGAGATCCCA+TGG | 0.591598 | 8_1:-66864027 | Msa1208650:CDS |
| AACGATGAGGTCAACCACAC+GGG | 0.595280 | 8_1:+66861965 | None:intergenic |
| TGGCTTCTGACCGAAGAGAA+GGG | 0.598953 | 8_1:+66864277 | None:intergenic |
| TTTGATTTGATCATAGGTGG+CGG | 0.599256 | 8_1:+66862543 | None:intergenic |
| CAGCACCAGTGCTAGCCCAT+GGG | 0.602177 | 8_1:+66864011 | None:intergenic |
| TGTTGTTGGTGTTAACGAGA+AGG | 0.604083 | 8_1:-66863185 | Msa1208650:CDS |
| AAATAATGACTTGTTTGTGG+GGG | 0.608109 | 8_1:+66864984 | None:intergenic |
| ATTGGATTGAATATCTAACA+AGG | 0.612667 | 8_1:+66861215 | None:intergenic |
| AAGATCAAGATCGGAATCAA+CGG | 0.613475 | 8_1:-66864700 | Msa1208650:intron |
| GATATTATTGTTGAGTCCAC+CGG | 0.613504 | 8_1:-66863989 | Msa1208650:CDS |
| AGACATCCACAGTTGGGACA+CGG | 0.619930 | 8_1:+66862599 | None:intergenic |
| GGTAGAGACGACATCGTCCT+CGG | 0.620352 | 8_1:+66862369 | None:intergenic |
| GAACGATGAGGTCAACCACA+CGG | 0.620524 | 8_1:+66861964 | None:intergenic |
| AAGAGACATGCAAAAGAGCA+CGG | 0.620699 | 8_1:+66861344 | None:intergenic |
| TCAGCCAAAGACTGGAGAGG+TGG | 0.620752 | 8_1:-66862824 | Msa1208650:CDS |
| TTGGATTGAATATCTAACAA+GGG | 0.623650 | 8_1:+66861216 | None:intergenic |
| CTATTAGCCTAGCAGCCGTT+AGG | 0.623959 | 8_1:-66861865 | Msa1208650:three_prime_UTR |
| ATGCACCGGTCACGTAAGCG+TGG | 0.625905 | 8_1:-66865034 | None:intergenic |
| TTCTGCAGGGAGGAGTCCGA+GGG | 0.627559 | 8_1:-66862418 | Msa1208650:intron |
| CCTTACAGTGAGGCTCGAGA+AGG | 0.630029 | 8_1:-66862566 | Msa1208650:CDS |
| ATACCTTAGCAAGTGGTGCA+AGG | 0.631223 | 8_1:+66863110 | None:intergenic |
| CCACCCAGAAGACTGTTGAT+GGG | 0.632542 | 8_1:-66862850 | Msa1208650:CDS |
| GGCATTCCGTGTCCCAACTG+TGG | 0.636309 | 8_1:-66862605 | Msa1208650:CDS |
| CATCGTCCTCGGTGTAACCA+AGG | 0.636984 | 8_1:+66862380 | None:intergenic |
| CCTGGTATCACCAATAAAGT+CGG | 0.637238 | 8_1:+66862348 | None:intergenic |
| GCTAGGAATGATGTTAAATG+AGG | 0.638580 | 8_1:+66862793 | None:intergenic |
| GCTCATAATACCTTAGCAAG+TGG | 0.648538 | 8_1:+66863103 | None:intergenic |
| CCCATCAACAGTCTTCTGGG+TGG | 0.650761 | 8_1:+66862850 | None:intergenic |
| ACAATTCACGACGAATCACA+TGG | 0.652384 | 8_1:+66861318 | None:intergenic |
| TTTAAGCTGTTACATTGCCG+TGG | 0.662429 | 8_1:-66861926 | Msa1208650:exon |
| ACGTAAGCGTGGATAAAACC+CGG | 0.666813 | 8_1:-66865023 | Msa1208650:five_prime_UTR |
| CCATCAGCCAAAGACTGGAG+AGG | 0.667444 | 8_1:-66862827 | Msa1208650:CDS |
| TTAACACCAACAACAAACAT+GGG | 0.669578 | 8_1:+66863193 | None:intergenic |
| CATGGGAGCATCCTTACTAG+GGG | 0.690619 | 8_1:+66863210 | None:intergenic |
| GCCAATTTATAGCACTACCA+CGG | 0.691846 | 8_1:+66861909 | None:intergenic |
| CAGTTGTTGACCTTACAGTG+AGG | 0.703068 | 8_1:-66862576 | Msa1208650:CDS |
| GAACCCAGAAGAGATCCCAT+GGG | 0.703112 | 8_1:-66864026 | Msa1208650:CDS |
| GTGATTCGTCGTGAATTGTG+AGG | 0.730098 | 8_1:-66861314 | Msa1208650:three_prime_UTR |
| ACCAGTGATAGAATGAACAG+TGG | 0.744850 | 8_1:+66862960 | None:intergenic |
| AGGAATCCTTGGTTACACCG+AGG | 0.796368 | 8_1:-66862386 | Msa1208650:CDS |
| GCTTTGCAATGTGAACGATG+AGG | 0.813789 | 8_1:+66861952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTTTTGTATTTAATTT+CGG | - | chr8_1:66862070-66862089 | Msa1208650:intron | 10.0% |
| !! | TAGACTAATTGAAATATTAA+TGG | + | chr8_1:66861461-66861480 | None:intergenic | 15.0% |
| !! | ATTGGTATAATATTGATATT+TGG | - | chr8_1:66862137-66862156 | Msa1208650:CDS | 15.0% |
| !! | ACTTATTACATTTAAAAAAG+AGG | + | chr8_1:66864393-66864412 | None:intergenic | 15.0% |
| !!! | TAAAATAATGACTTGTTTGT+GGG | + | chr8_1:66861253-66861272 | None:intergenic | 20.0% |
| !!! | ATAAAATAATGACTTGTTTG+TGG | + | chr8_1:66861254-66861273 | None:intergenic | 20.0% |
| !! | AAGAAATGAAATGAGAAATA+GGG | + | chr8_1:66861294-66861313 | None:intergenic | 20.0% |
| !! | AATTAAGGAAAATAATGAAG+AGG | + | chr8_1:66861425-66861444 | None:intergenic | 20.0% |
| !! | GGAAAATTAACGAAAAATTA+AGG | + | chr8_1:66861440-66861459 | None:intergenic | 20.0% |
| !! | TAATGTTTATATATGCAACT+AGG | - | chr8_1:66862044-66862063 | Msa1208650:intron | 20.0% |
| !! | TGTTACTGTTTAATTAGTAT+TGG | - | chr8_1:66862119-66862138 | Msa1208650:intron | 20.0% |
| !!! | AATTTTAGTAAACAGTAATC+AGG | + | chr8_1:66862340-66862359 | None:intergenic | 20.0% |
| !! | TGTATGTTGATATTATTATG+TGG | - | chr8_1:66862502-66862521 | Msa1208650:intron | 20.0% |
| !! | TTTAAAAGAGACAAATGTTA+CGG | + | chr8_1:66862592-66862611 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTTGTTTAATCT+AGG | - | chr8_1:66862972-66862991 | Msa1208650:CDS | 20.0% |
| !!! | GTTTTTGTTTGTTTAATCTA+GGG | - | chr8_1:66862973-66862992 | Msa1208650:CDS | 20.0% |
| !! | TTAGAGAATAAAATATCAGT+TGG | + | chr8_1:66863154-66863173 | None:intergenic | 20.0% |
| !!! | TACCTGTTTATTTATTTTGT+AGG | - | chr8_1:66863210-66863229 | Msa1208650:CDS | 20.0% |
| !! | AACCTACAAAATAAATAAAC+AGG | + | chr8_1:66863215-66863234 | None:intergenic | 20.0% |
| !! | GGATTTGATATCTTATTATT+TGG | - | chr8_1:66863321-66863340 | Msa1208650:intron | 20.0% |
| !!! | CTTAACAAAATTGTCATTTA+AGG | + | chr8_1:66864070-66864089 | None:intergenic | 20.0% |
| !!! | AAATTTTAATGCTCTTTTCA+TGG | + | chr8_1:66864566-66864585 | None:intergenic | 20.0% |
| !!! | AAAATAATGACTTGTTTGTG+GGG | + | chr8_1:66861252-66861271 | None:intergenic | 25.0% |
| !! | AAATGAGAAATAGGGTTTTA+AGG | + | chr8_1:66861286-66861305 | None:intergenic | 25.0% |
| ! | GAAGAAATGAAATGAGAAAT+AGG | + | chr8_1:66861295-66861314 | None:intergenic | 25.0% |
| ! | AGAATTCGAAACAAAAACAA+AGG | + | chr8_1:66861500-66861519 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGTTTCGAATTC+TGG | - | chr8_1:66861499-66861518 | Msa1208650:three_prime_UTR | 25.0% |
| !! | ATTTAATTTCGGTGTAGATA+TGG | - | chr8_1:66862081-66862100 | Msa1208650:intron | 25.0% |
| !! | TTTAATTTCGGTGTAGATAT+GGG | - | chr8_1:66862082-66862101 | Msa1208650:intron | 25.0% |
| !!! | TGTCTATTTTTTTGTGCTTT+AGG | - | chr8_1:66862184-66862203 | Msa1208650:CDS | 25.0% |
| ! | TTTGAAGGTTTGTATTTCAT+TGG | - | chr8_1:66862299-66862318 | Msa1208650:intron | 25.0% |
| !!! | ATATTACAATAGTTTCTAGC+AGG | - | chr8_1:66862853-66862872 | Msa1208650:CDS | 25.0% |
| ! | CTTCTATTTACTGAATCTTA+TGG | - | chr8_1:66862903-66862922 | Msa1208650:intron | 25.0% |
| ! | TTATTCTCTAATTTCCATGT+TGG | - | chr8_1:66863163-66863182 | Msa1208650:CDS | 25.0% |
| ! | AAATAAACAGGTAACAGTTA+TGG | + | chr8_1:66863203-66863222 | None:intergenic | 25.0% |
| ! | CTAAAATACTTGATCACAAA+GGG | + | chr8_1:66863750-66863769 | None:intergenic | 25.0% |
| ! | GCAGAAAATTAAACAAAACA+GGG | + | chr8_1:66864243-66864262 | None:intergenic | 25.0% |
| ! | TGCAGAAAATTAAACAAAAC+AGG | + | chr8_1:66864244-66864263 | None:intergenic | 25.0% |
| !! | TTGGATTTTTATGCATTTAC+CGG | - | chr8_1:66864492-66864511 | Msa1208650:CDS | 25.0% |
| ! | ATTATCACCCAAATTAAATC+CGG | + | chr8_1:66864514-66864533 | None:intergenic | 25.0% |
| !! | AAATGAAAAGTCTGCAATTT+TGG | - | chr8_1:66864659-66864678 | Msa1208650:intron | 25.0% |
| ! | TTGGATTGAATATCTAACAA+GGG | + | chr8_1:66865019-66865038 | None:intergenic | 25.0% |
| ! | ATTGGATTGAATATCTAACA+AGG | + | chr8_1:66865020-66865039 | None:intergenic | 25.0% |
| !! | AAATAATGACTTGTTTGTGG+GGG | + | chr8_1:66861251-66861270 | None:intergenic | 30.0% |
| ! | TAATTTTGTTCGTAACTGAC+AGG | - | chr8_1:66861645-66861664 | Msa1208650:three_prime_UTR | 30.0% |
| ! | ATTTTGTACCATGTAATCAG+TGG | + | chr8_1:66861757-66861776 | None:intergenic | 30.0% |
| ATGGTACAAAATTCTTCCTT+CGG | - | chr8_1:66861765-66861784 | Msa1208650:three_prime_UTR | 30.0% | |
| AATAGACAAACAAAAACCGA+AGG | + | chr8_1:66861784-66861803 | None:intergenic | 30.0% | |
| !! | AGATCTGATTTATTTCTGTG+TGG | - | chr8_1:66861848-66861867 | Msa1208650:three_prime_UTR | 30.0% |
| TTTAAGTATGACAGTGTTCA+CGG | - | chr8_1:66861891-66861910 | Msa1208650:three_prime_UTR | 30.0% | |
| AACTATTATGTGCAGCATTT+GGG | + | chr8_1:66862377-66862396 | None:intergenic | 30.0% | |
| ! | CTATTTTCTAAACATGCTCA+TGG | - | chr8_1:66862543-66862562 | Msa1208650:CDS | 30.0% |
| TAACAATACATTGCAAGTTG+TGG | + | chr8_1:66862879-66862898 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTATGAAGTGTAG+TGG | - | chr8_1:66862940-66862959 | Msa1208650:intron | 30.0% |
| !! | AGTTTTGTATGAAGTGTAGT+GGG | - | chr8_1:66862941-66862960 | Msa1208650:intron | 30.0% |
| TTTGTTTGTTTAATCTAGGG+TGG | - | chr8_1:66862976-66862995 | Msa1208650:CDS | 30.0% | |
| TTAACACCAACAACAAACAT+GGG | + | chr8_1:66863042-66863061 | None:intergenic | 30.0% | |
| TAGGTTATCAATGACAGATT+TGG | - | chr8_1:66863229-66863248 | Msa1208650:CDS | 30.0% | |
| CAGCATGAAAAGAATGAATT+AGG | + | chr8_1:66863349-66863368 | None:intergenic | 30.0% | |
| ATTAGACAACACAATAACAG+TGG | + | chr8_1:66863517-66863536 | None:intergenic | 30.0% | |
| ! | TTTTCATTCTGTGTCTTACT+AGG | - | chr8_1:66863558-66863577 | Msa1208650:intron | 30.0% |
| GCTAAAATACTTGATCACAA+AGG | + | chr8_1:66863751-66863770 | None:intergenic | 30.0% | |
| !!! | TTGTGATCAAGTATTTTAGC+AGG | - | chr8_1:66863751-66863770 | Msa1208650:intron | 30.0% |
| !! | TTTAACATTTCTGTTTCTGC+AGG | - | chr8_1:66863800-66863819 | Msa1208650:intron | 30.0% |
| !! | TTAACATTTCTGTTTCTGCA+GGG | - | chr8_1:66863801-66863820 | Msa1208650:intron | 30.0% |
| CTGCTAGTATAATATTTACC+TGG | + | chr8_1:66863905-66863924 | None:intergenic | 30.0% | |
| CAGGTAAATATTATACTAGC+AGG | - | chr8_1:66863903-66863922 | Msa1208650:intron | 30.0% | |
| ! | TTTTGTGTTATCAATGTTCC+AGG | - | chr8_1:66864013-66864032 | Msa1208650:CDS | 30.0% |
| ! | ATTTTGTTAAGCTTGTCTCT+TGG | - | chr8_1:66864079-66864098 | Msa1208650:intron | 30.0% |
| TCAACAATAAACCATACGAA+AGG | + | chr8_1:66864144-66864163 | None:intergenic | 30.0% | |
| TTCAAGAATTTCAACCAACT+AGG | + | chr8_1:66864176-66864195 | None:intergenic | 30.0% | |
| CATTTAAAAAAGAGGCCTAA+CGG | + | chr8_1:66864385-66864404 | None:intergenic | 30.0% | |
| AAAACACTACGGTTCAATAA+GGG | + | chr8_1:66864440-66864459 | None:intergenic | 30.0% | |
| AAAAACACTACGGTTCAATA+AGG | + | chr8_1:66864441-66864460 | None:intergenic | 30.0% | |
| ! | TTATTGAACCGTAGTGTTTT+TGG | - | chr8_1:66864440-66864459 | Msa1208650:intron | 30.0% |
| TTAAGCAACCAAAAACACTA+CGG | + | chr8_1:66864451-66864470 | None:intergenic | 30.0% | |
| TGCATTTACCGGATTTAATT+TGG | - | chr8_1:66864503-66864522 | Msa1208650:CDS | 30.0% | |
| ! | GCATTTACCGGATTTAATTT+GGG | - | chr8_1:66864504-66864523 | Msa1208650:CDS | 30.0% |
| !! | CTTTCTATAGCTTTATTACG+TGG | - | chr8_1:66864993-66865012 | Msa1208650:five_prime_UTR | 30.0% |
| AAAGAACGATGATGAGTAGA+AGG | + | chr8_1:66861323-66861342 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTTCGAATTCTGG+TGG | - | chr8_1:66861502-66861521 | Msa1208650:three_prime_UTR | 35.0% |
| AAGATCAAGATCGGAATCAA+CGG | - | chr8_1:66861532-66861551 | Msa1208650:three_prime_UTR | 35.0% | |
| CTCTTCATTTCTGCATAGAT+CGG | - | chr8_1:66861579-66861598 | Msa1208650:three_prime_UTR | 35.0% | |
| ! | ATGTAATCAGTGGTGATGAA+AGG | + | chr8_1:66861747-66861766 | None:intergenic | 35.0% |
| ! | TTTCATCACCACTGATTACA+TGG | - | chr8_1:66861746-66861765 | Msa1208650:three_prime_UTR | 35.0% |
| GATATTATTGTTGAGTCCAC+CGG | - | chr8_1:66862243-66862262 | Msa1208650:intron | 35.0% | |
| CAACTATTATGTGCAGCATT+TGG | + | chr8_1:66862378-66862397 | None:intergenic | 35.0% | |
| ATCATATATGTGCTGCAACT+GGG | + | chr8_1:66862432-66862451 | None:intergenic | 35.0% | |
| AACATACATGTGCAGCAATT+GGG | + | chr8_1:66862490-66862509 | None:intergenic | 35.0% | |
| TTCTTCAATAGCAGCTATAC+TGG | - | chr8_1:66862656-66862675 | Msa1208650:intron | 35.0% | |
| GTTAACACCAACAACAAACA+TGG | + | chr8_1:66863043-66863062 | None:intergenic | 35.0% | |
| TTGGAGATGATATCAAACTC+TGG | + | chr8_1:66863081-66863100 | None:intergenic | 35.0% | |
| GCTAGGAATGATGTTAAATG+AGG | + | chr8_1:66863442-66863461 | None:intergenic | 35.0% | |
| ATGTGATGATTCTCTTGATG+TGG | - | chr8_1:66863535-66863554 | Msa1208650:intron | 35.0% | |
| !! | TTTGATTTGATCATAGGTGG+CGG | + | chr8_1:66863692-66863711 | None:intergenic | 35.0% |
| !! | AGCTTTGATTTGATCATAGG+TGG | + | chr8_1:66863695-66863714 | None:intergenic | 35.0% |
| !! | AGCAGCTTTGATTTGATCAT+AGG | + | chr8_1:66863698-66863717 | None:intergenic | 35.0% |
| GTTGATATCTGAATCCTAGT+TGG | - | chr8_1:66864159-66864178 | Msa1208650:intron | 35.0% | |
| GACTGTAAGAAACAAAAAGC+AGG | + | chr8_1:66864348-66864367 | None:intergenic | 35.0% | |
| AAACACTACGGTTCAATAAG+GGG | + | chr8_1:66864439-66864458 | None:intergenic | 35.0% | |
| TGCATCTCTTGAAGAAAAAG+TGG | - | chr8_1:66864618-66864637 | Msa1208650:intron | 35.0% | |
| GCATCTCTTGAAGAAAAAGT+GGG | - | chr8_1:66864619-66864638 | Msa1208650:intron | 35.0% | |
| ! | GCAGACTTTTCATTTCATCT+AGG | + | chr8_1:66864654-66864673 | None:intergenic | 35.0% |
| !! | TCTGCAATTTTGGTCGAATT+TGG | - | chr8_1:66864669-66864688 | Msa1208650:intron | 35.0% |
| ! | TTTTGCATAAGCAGTTATCG+TGG | - | chr8_1:66864702-66864721 | Msa1208650:CDS | 35.0% |
| AAGCATCAGATGAGATGAAA+GGG | + | chr8_1:66864976-66864995 | None:intergenic | 35.0% | |
| ! | AAAGCATCAGATGAGATGAA+AGG | + | chr8_1:66864977-66864996 | None:intergenic | 35.0% |
| TAGAGAGAGTAGAGTGATAG+CGG | + | chr8_1:66861346-66861365 | None:intergenic | 40.0% | |
| !!! | TCCTCTTTGTTTTTCAGCCA+TGG | - | chr8_1:66861379-66861398 | Msa1208650:three_prime_UTR | 40.0% |
| !!! | CCTCTTTGTTTTTCAGCCAT+GGG | - | chr8_1:66861380-66861399 | Msa1208650:three_prime_UTR | 40.0% |
| TGAATAATTACCACCACCCA+TGG | + | chr8_1:66861399-66861418 | None:intergenic | 40.0% | |
| ! | GTTGATTCCGATCTTGATCT+TGG | + | chr8_1:66861533-66861552 | None:intergenic | 40.0% |
| CAGAAATGAAGAGAGATCGA+AGG | + | chr8_1:66861572-66861591 | None:intergenic | 40.0% | |
| TGTTCGTAACTGACAGGATT+TGG | - | chr8_1:66861651-66861670 | Msa1208650:three_prime_UTR | 40.0% | |
| CTGACAGGATTTGGAAGAAT+CGG | - | chr8_1:66861660-66861679 | Msa1208650:three_prime_UTR | 40.0% | |
| ATTTGGAAGAATCGGACGTT+TGG | - | chr8_1:66861668-66861687 | Msa1208650:three_prime_UTR | 40.0% | |
| !! | GACTCTAAAACCCTTCTCTT+CGG | - | chr8_1:66861945-66861964 | Msa1208650:CDS | 40.0% |
| CATCATATATGTGCTGCAAC+TGG | + | chr8_1:66862433-66862452 | None:intergenic | 40.0% | |
| CAACATACATGTGCAGCAAT+TGG | + | chr8_1:66862491-66862510 | None:intergenic | 40.0% | |
| AGTGTATCGCAGAACAATAG+TGG | + | chr8_1:66862718-66862737 | None:intergenic | 40.0% | |
| TTGTCACATAGCTGCTATAG+TGG | - | chr8_1:66862753-66862772 | Msa1208650:intron | 40.0% | |
| ACTATATCACAACTGCGTAG+CGG | - | chr8_1:66862777-66862796 | Msa1208650:CDS | 40.0% | |
| !! | TGTTGTTGGTGTTAACGAGA+AGG | - | chr8_1:66863047-66863066 | Msa1208650:intron | 40.0% |
| GCTCATAATACCTTAGCAAG+TGG | + | chr8_1:66863132-66863151 | None:intergenic | 40.0% | |
| GTAACAGTTATGGCCTCATA+CGG | + | chr8_1:66863193-66863212 | None:intergenic | 40.0% | |
| TGACAGATTTGGCATTGTTG+AGG | - | chr8_1:66863240-66863259 | Msa1208650:CDS | 40.0% | |
| GACAGATTTGGCATTGTTGA+GGG | - | chr8_1:66863241-66863260 | Msa1208650:CDS | 40.0% | |
| ACCACTGTTCATTCTATCAC+TGG | - | chr8_1:66863271-66863290 | Msa1208650:intron | 40.0% | |
| ACCAGTGATAGAATGAACAG+TGG | + | chr8_1:66863275-66863294 | None:intergenic | 40.0% | |
| CTGTTCATTCTATCACTGGT+AGG | - | chr8_1:66863275-66863294 | Msa1208650:intron | 40.0% | |
| TAGTGCTAGTGAGTAACTCT+TGG | - | chr8_1:66863300-66863319 | Msa1208650:intron | 40.0% | |
| ! | AAAGTGCTTCCTGCTTTGAA+TGG | - | chr8_1:66863589-66863608 | Msa1208650:intron | 40.0% |
| GTCAACTTTCCATTCAAAGC+AGG | + | chr8_1:66863601-66863620 | None:intergenic | 40.0% | |
| ! | GCTTTGAATGGAAAGTTGAC+TGG | - | chr8_1:66863601-66863620 | Msa1208650:intron | 40.0% |
| GAATGGAAAGTTGACTGGAA+TGG | - | chr8_1:66863606-66863625 | Msa1208650:intron | 40.0% | |
| CCTGGTATCACCAATAAAGT+CGG | + | chr8_1:66863887-66863906 | None:intergenic | 40.0% | |
| ! | ATTTAAGGCAATTCCTGCCT+TGG | + | chr8_1:66864055-66864074 | None:intergenic | 40.0% |
| TCTTGGTATGACAACGAGTT+GGG | - | chr8_1:66864096-66864115 | Msa1208650:intron | 40.0% | |
| ATTCAGTCTGACCTTTCGTA+TGG | - | chr8_1:66864130-66864149 | Msa1208650:intron | 40.0% | |
| TTTAAGCTGTTACATTGCCG+TGG | - | chr8_1:66864306-66864325 | Msa1208650:CDS | 40.0% | |
| GCCAATTTATAGCACTACCA+CGG | + | chr8_1:66864326-66864345 | None:intergenic | 40.0% | |
| CCAAAACAACTCGTTGCTTA+TGG | + | chr8_1:66864476-66864495 | None:intergenic | 40.0% | |
| ! | CCATAAGCAACGAGTTGTTT+TGG | - | chr8_1:66864473-66864492 | Msa1208650:intron | 40.0% |
| CATGGCGTATATGTGAAACT+TGG | + | chr8_1:66864548-66864567 | None:intergenic | 40.0% | |
| ! | CGTGACTTGTATGATCTCTA+TGG | - | chr8_1:66864740-66864759 | Msa1208650:intron | 40.0% |
| AAGAGACATGCAAAAGAGCA+CGG | + | chr8_1:66864891-66864910 | None:intergenic | 40.0% | |
| ACAATTCACGACGAATCACA+TGG | + | chr8_1:66864917-66864936 | None:intergenic | 40.0% | |
| !! | AATGACTTGTTTGTGGGGGT+AGG | + | chr8_1:66861247-66861266 | None:intergenic | 45.0% |
| CCCATGGCTGAAAAACAAAG+AGG | + | chr8_1:66861383-66861402 | None:intergenic | 45.0% | |
| !!! | CTTTGTTTTTCAGCCATGGG+TGG | - | chr8_1:66861383-66861402 | Msa1208650:three_prime_UTR | 45.0% |
| GGATCAGCCAAGATCAAGAT+CGG | - | chr8_1:66861523-66861542 | Msa1208650:three_prime_UTR | 45.0% | |
| ATGACAGTGTTCACGGACAA+TGG | - | chr8_1:66861898-66861917 | Msa1208650:three_prime_UTR | 45.0% | |
| CTGTGAGCAAAGACAGTTAC+TGG | + | chr8_1:66861978-66861997 | None:intergenic | 45.0% | |
| CAGTAACTGTCTTTGCTCAC+AGG | - | chr8_1:66861976-66861995 | Msa1208650:intron | 45.0% | |
| GTCCTTGTCGGTAAAAACAC+CGG | + | chr8_1:66862265-66862284 | None:intergenic | 45.0% | |
| CAAAGCTGCTGCTCATTTGA+AGG | - | chr8_1:66862284-66862303 | Msa1208650:intron | 45.0% | |
| CTACCTGCGATTGACAACAA+TGG | - | chr8_1:66862825-66862844 | Msa1208650:CDS | 45.0% | |
| CAACCATTGTTGTCAATCGC+AGG | + | chr8_1:66862831-66862850 | None:intergenic | 45.0% | |
| GGCAGAAATGATGACCTTCT+TGG | + | chr8_1:66863004-66863023 | None:intergenic | 45.0% | |
| CATCATTTCTGCCCCTAGTA+AGG | - | chr8_1:66863011-66863030 | Msa1208650:intron | 45.0% | |
| !! | ACATGGGAGCATCCTTACTA+GGG | + | chr8_1:66863026-66863045 | None:intergenic | 45.0% |
| !! | AACATGGGAGCATCCTTACT+AGG | + | chr8_1:66863027-66863046 | None:intergenic | 45.0% |
| !! | GATGCTCCCATGTTTGTTGT+TGG | - | chr8_1:66863033-66863052 | Msa1208650:intron | 45.0% |
| ATACCTTAGCAAGTGGTGCA+AGG | + | chr8_1:66863125-66863144 | None:intergenic | 45.0% | |
| CCTCATACGGTAAACCAACA+TGG | + | chr8_1:66863180-66863199 | None:intergenic | 45.0% | |
| !! | CCATGTTGGTTTACCGTATG+AGG | - | chr8_1:66863177-66863196 | Msa1208650:CDS | 45.0% |
| AACATCATTCCTAGCAGCAC+TGG | - | chr8_1:66863447-66863466 | Msa1208650:intron | 45.0% | |
| TCTGTGTCTTACTAGGCTGT+TGG | - | chr8_1:66863565-66863584 | Msa1208650:intron | 45.0% | |
| CAACTGAGACATCCACAGTT+GGG | + | chr8_1:66863642-66863661 | None:intergenic | 45.0% | |
| ACAACTGAGACATCCACAGT+TGG | + | chr8_1:66863643-66863662 | None:intergenic | 45.0% | |
| CAGTTGTTGACCTTACAGTG+AGG | - | chr8_1:66863656-66863675 | Msa1208650:intron | 45.0% | |
| !! | ACATTTCTGTTTCTGCAGGG+AGG | - | chr8_1:66863804-66863823 | Msa1208650:intron | 45.0% |
| !! | GATTCCTTTCAAGTTGCCCT+CGG | + | chr8_1:66863833-66863852 | None:intergenic | 45.0% |
| GGCAACTTGAAAGGAATCCT+TGG | - | chr8_1:66863835-66863854 | Msa1208650:intron | 45.0% | |
| !! | GTCGTCTCTACCGACTTTAT+TGG | - | chr8_1:66863874-66863893 | Msa1208650:intron | 45.0% |
| ! | CCGACTTTATTGGTGATACC+AGG | - | chr8_1:66863884-66863903 | Msa1208650:intron | 45.0% |
| GTCAAGCATCTTTGATGCCA+AGG | - | chr8_1:66864035-66864054 | Msa1208650:intron | 45.0% | |
| CTCTTGGTATGACAACGAGT+TGG | - | chr8_1:66864095-66864114 | Msa1208650:intron | 45.0% | |
| ! | ATGACAACGAGTTGGGTTAC+AGG | - | chr8_1:66864103-66864122 | Msa1208650:intron | 45.0% |
| ! | AATTTTCTGCAGTACCCGTG+TGG | - | chr8_1:66864253-66864272 | Msa1208650:intron | 45.0% |
| GCTTTGCAATGTGAACGATG+AGG | + | chr8_1:66864283-66864302 | None:intergenic | 45.0% | |
| ! | GCCGTGGTAGTGCTATAAAT+TGG | - | chr8_1:66864322-66864341 | Msa1208650:CDS | 45.0% |
| GTGATTCGTCGTGAATTGTG+AGG | - | chr8_1:66864918-66864937 | Msa1208650:five_prime_UTR | 45.0% | |
| ! | GGTAGGTCAAGTTTGGTTCC+GGG | + | chr8_1:66861230-66861249 | None:intergenic | 50.0% |
| ! | GGGTAGGTCAAGTTTGGTTC+CGG | + | chr8_1:66861231-66861250 | None:intergenic | 50.0% |
| TTGTGGGGGTAGGTCAAGTT+TGG | + | chr8_1:66861237-66861256 | None:intergenic | 50.0% | |
| !! | TGTTTTTCAGCCATGGGTGG+TGG | - | chr8_1:66861386-66861405 | Msa1208650:three_prime_UTR | 50.0% |
| TGGCTTCTGACCGAAGAGAA+GGG | + | chr8_1:66861958-66861977 | None:intergenic | 50.0% | |
| GAACCCAGAAGAGATCCCAT+GGG | - | chr8_1:66862206-66862225 | Msa1208650:intron | 50.0% | |
| TAGCCCATGGGATCTCTTCT+GGG | + | chr8_1:66862212-66862231 | None:intergenic | 50.0% | |
| CTTGTCGGTAAAAACACCGG+TGG | + | chr8_1:66862262-66862281 | None:intergenic | 50.0% | |
| !! | CACCGGTGTTTTTACCGACA+AGG | - | chr8_1:66862260-66862279 | Msa1208650:intron | 50.0% |
| ! | AGCAGCAGCTTTGTCCTTGT+CGG | + | chr8_1:66862277-66862296 | None:intergenic | 50.0% |
| GCTATGCTGCTATTGCGTAG+CGG | - | chr8_1:66862680-66862699 | Msa1208650:intron | 50.0% | |
| !! | TGCTATTGCGTAGCGGACTT+TGG | - | chr8_1:66862687-66862706 | Msa1208650:intron | 50.0% |
| TCGCAGGTAGCTGACAATAG+CGG | + | chr8_1:66862815-66862834 | None:intergenic | 50.0% | |
| ! | AATCTAGGGTGGTGCCAAGA+AGG | - | chr8_1:66862987-66863006 | Msa1208650:CDS | 50.0% |
| !! | CATGGGAGCATCCTTACTAG+GGG | + | chr8_1:66863025-66863044 | None:intergenic | 50.0% |
| !! | GTTGGTAGTGCAGCTAGCAT+TGG | + | chr8_1:66863100-66863119 | None:intergenic | 50.0% |
| CCACCCAGAAGACTGTTGAT+GGG | - | chr8_1:66863382-66863401 | Msa1208650:intron | 50.0% | |
| TGGCCCATCAACAGTCTTCT+GGG | + | chr8_1:66863388-66863407 | None:intergenic | 50.0% | |
| ATGGCCCATCAACAGTCTTC+TGG | + | chr8_1:66863389-66863408 | None:intergenic | 50.0% | |
| TCTTCCACCTCTCCAGTCTT+TGG | + | chr8_1:66863415-66863434 | None:intergenic | 50.0% | |
| AGACATCCACAGTTGGGACA+CGG | + | chr8_1:66863636-66863655 | None:intergenic | 50.0% | |
| AGGAATCCTTGGTTACACCG+AGG | - | chr8_1:66863846-66863865 | Msa1208650:intron | 50.0% | |
| !! | CAGTCTAGAAGTGTTCACGC+TGG | - | chr8_1:66863926-66863945 | Msa1208650:intron | 50.0% |
| !! | TCTAGAAGTGTTCACGCTGG+TGG | - | chr8_1:66863929-66863948 | Msa1208650:intron | 50.0% |
| GGCATCAAAGATGCTTGACC+TGG | + | chr8_1:66864034-66864053 | None:intergenic | 50.0% | |
| AGCATCTTTGATGCCAAGGC+AGG | - | chr8_1:66864039-66864058 | Msa1208650:intron | 50.0% | |
| AACGATGAGGTCAACCACAC+GGG | + | chr8_1:66864270-66864289 | None:intergenic | 50.0% | |
| GAACGATGAGGTCAACCACA+CGG | + | chr8_1:66864271-66864290 | None:intergenic | 50.0% | |
| ! | CTATTAGCCTAGCAGCCGTT+AGG | - | chr8_1:66864367-66864386 | Msa1208650:intron | 50.0% |
| ! | AAGGGGCAAGCTTCAAGTTC+AGG | + | chr8_1:66864422-66864441 | None:intergenic | 50.0% |
| CTGGCTTCTGACCGAAGAGA+AGG | + | chr8_1:66861959-66861978 | None:intergenic | 55.0% | |
| GGAACCCAGAAGAGATCCCA+TGG | - | chr8_1:66862205-66862224 | Msa1208650:intron | 55.0% | |
| CTAGCCCATGGGATCTCTTC+TGG | + | chr8_1:66862213-66862232 | None:intergenic | 55.0% | |
| AGCAAGTGGTGCAAGGCAGT+TGG | + | chr8_1:66863118-66863137 | None:intergenic | 55.0% | |
| ! | CTGCCTTGCACCACTTGCTA+AGG | - | chr8_1:66863119-66863138 | Msa1208650:CDS | 55.0% |
| CAGTCTTCTGGGTGGCTGAT+TGG | + | chr8_1:66863377-66863396 | None:intergenic | 55.0% | |
| GCCACCCAGAAGACTGTTGA+TGG | - | chr8_1:66863381-66863400 | Msa1208650:intron | 55.0% | |
| CCCATCAACAGTCTTCTGGG+TGG | + | chr8_1:66863385-66863404 | None:intergenic | 55.0% | |
| ATGGGCCATCAGCCAAAGAC+TGG | - | chr8_1:66863400-66863419 | Msa1208650:intron | 55.0% | |
| CCTCTCCAGTCTTTGGCTGA+TGG | + | chr8_1:66863408-66863427 | None:intergenic | 55.0% | |
| CCATCAGCCAAAGACTGGAG+AGG | - | chr8_1:66863405-66863424 | Msa1208650:intron | 55.0% | |
| TCAGCCAAAGACTGGAGAGG+TGG | - | chr8_1:66863408-66863427 | Msa1208650:intron | 55.0% | |
| ! | TTAGCAGCTCCAGTGCTGCT+AGG | + | chr8_1:66863459-66863478 | None:intergenic | 55.0% |
| CCTTCTCGAGCCTCACTGTA+AGG | + | chr8_1:66863669-66863688 | None:intergenic | 55.0% | |
| CCTTACAGTGAGGCTCGAGA+AGG | - | chr8_1:66863666-66863685 | Msa1208650:intron | 55.0% | |
| GAGTCCGAGGGCAACTTGAA+AGG | - | chr8_1:66863826-66863845 | Msa1208650:intron | 55.0% | |
| ! | CATCGTCCTCGGTGTAACCA+AGG | + | chr8_1:66863855-66863874 | None:intergenic | 55.0% |
| GGTAGAGACGACATCGTCCT+CGG | + | chr8_1:66863866-66863885 | None:intergenic | 55.0% | |
| AAAGAGGCCTAACGGCTGCT+AGG | + | chr8_1:66864377-66864396 | None:intergenic | 55.0% | |
| !! | GAGATCCCATGGGCTAGCAC+TGG | - | chr8_1:66862216-66862235 | Msa1208650:intron | 60.0% |
| CAGCACCAGTGCTAGCCCAT+GGG | + | chr8_1:66862224-66862243 | None:intergenic | 60.0% | |
| TCAGCACCAGTGCTAGCCCA+TGG | + | chr8_1:66862225-66862244 | None:intergenic | 60.0% | |
| GGCATTCCGTGTCCCAACTG+TGG | - | chr8_1:66863627-66863646 | Msa1208650:intron | 60.0% | |
| TTTCTGCAGGGAGGAGTCCG+AGG | - | chr8_1:66863813-66863832 | Msa1208650:intron | 60.0% | |
| TTCTGCAGGGAGGAGTCCGA+GGG | - | chr8_1:66863814-66863833 | Msa1208650:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66861211 | 66865043 | 66861211 | ID=Msa1208650;Name=Msa1208650 |
| chr8_1 | mRNA | 66861211 | 66865043 | 66861211 | ID=Msa1208650-mRNA-1;Parent=Msa1208650;Name=Msa1208650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=187|1|1|1|0.81|0.91|12|733|339 |
| chr8_1 | exon | 66861211 | 66861989 | 66861211 | ID=Msa1208650-mRNA-1:exon:22026;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66862130 | 66862219 | 66862130 | ID=Msa1208650-mRNA-1:exon:22025;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66862349 | 66862432 | 66862349 | ID=Msa1208650-mRNA-1:exon:22024;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66862532 | 66862674 | 66862532 | ID=Msa1208650-mRNA-1:exon:22023;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66862775 | 66862872 | 66862775 | ID=Msa1208650-mRNA-1:exon:22022;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66862962 | 66863022 | 66862962 | ID=Msa1208650-mRNA-1:exon:22021;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66863114 | 66863260 | 66863114 | ID=Msa1208650-mRNA-1:exon:22020;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66863949 | 66864048 | 66863949 | ID=Msa1208650-mRNA-1:exon:22019;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66864257 | 66864372 | 66864257 | ID=Msa1208650-mRNA-1:exon:22018;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66864487 | 66864587 | 66864487 | ID=Msa1208650-mRNA-1:exon:22017;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66864701 | 66864724 | 66864701 | ID=Msa1208650-mRNA-1:exon:22016;Parent=Msa1208650-mRNA-1 |
| chr8_1 | exon | 66864847 | 66865043 | 66864847 | ID=Msa1208650-mRNA-1:exon:22015;Parent=Msa1208650-mRNA-1 |
| chr8_1 | five_prime_UTR | 66864857 | 66865043 | 66864857 | ID=Msa1208650-mRNA-1:five_prime_utr;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66864847 | 66864856 | 66864847 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66864701 | 66864724 | 66864701 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66864487 | 66864587 | 66864487 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66864257 | 66864372 | 66864257 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66863949 | 66864048 | 66863949 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66863114 | 66863260 | 66863114 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66862962 | 66863022 | 66862962 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66862775 | 66862872 | 66862775 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66862532 | 66862674 | 66862532 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66862349 | 66862432 | 66862349 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66862130 | 66862219 | 66862130 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | CDS | 66861944 | 66861989 | 66861944 | ID=Msa1208650-mRNA-1:cds;Parent=Msa1208650-mRNA-1 |
| chr8_1 | three_prime_UTR | 66861211 | 66861943 | 66861211 | ID=Msa1208650-mRNA-1:three_prime_utr;Parent=Msa1208650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
