AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1383860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383860 MtrunA17_Chr4g0071571 80.247 567 32 6 228 721 66 625 0.0 840
Msa1383860 MtrunA17_Chr7g0255941 53.604 541 187 12 229 721 67 591 3.58e-166 491
Msa1383860 MtrunA17_Chr4g0044181 48.515 606 188 13 228 721 66 659 4.27e-165 491
Msa1383860 MtrunA17_Chr6g0478431 51.712 555 189 12 229 721 67 604 4.92e-162 481
Msa1383860 MtrunA17_Chr1g0160461 50.702 570 189 10 229 721 67 621 8.45e-159 473
Msa1383860 MtrunA17_Chr8g0393111 46.813 502 177 15 229 691 67 517 9.24e-123 377
Msa1383860 MtrunA17_Chr1g0159341 44.639 513 212 15 229 721 67 527 3.46e-110 344
Msa1383860 MtrunA17_Chr4g0071561 78.646 192 34 2 508 697 130 316 2.78e-97 303
Msa1383860 MtrunA17_Chr4g0071561 57.143 77 30 2 373 448 55 129 1.19e-15 79.0
Msa1383860 MtrunA17_Chr2g0298971 36.742 528 225 16 218 700 54 517 1.98e-84 276
Msa1383860 MtrunA17_Chr4g0071551 92.593 135 10 0 228 362 66 200 1.16e-81 258
Msa1383860 MtrunA17_Chr7g0252861 71.687 166 4 1 91 213 1 166 6.10e-65 223
Msa1383860 MtrunA17_Chr6g0452821 54.762 168 69 2 556 721 198 360 5.98e-53 187
Msa1383860 MtrunA17_Chr6g0452821 48.421 95 49 0 226 320 64 158 1.64e-17 85.1
Msa1383860 MtrunA17_Chr7g0216571 49.756 205 88 3 517 721 178 367 1.06e-52 186
Msa1383860 MtrunA17_Chr7g0216571 47.115 104 50 2 226 327 75 175 3.79e-18 87.0
Msa1383860 MtrunA17_Chr7g0249141 43.284 201 97 3 526 719 169 359 1.67e-47 172
Msa1383860 MtrunA17_Chr7g0249141 41.026 117 65 3 229 343 67 181 8.12e-18 85.9
Msa1383860 MtrunA17_Chr6g0461671 79.310 87 18 0 127 213 93 179 4.75e-36 142
Msa1383860 MtrunA17_Chr7g0252881 66.667 87 29 0 127 213 57 143 1.65e-32 131
Msa1383860 MtrunA17_Chr4g0015031 65.591 93 32 0 127 219 67 159 2.31e-32 131
Msa1383860 MtrunA17_Chr7g0252911 56.364 110 48 0 104 213 34 143 4.38e-32 130
Msa1383860 MtrunA17_Chr7g0252891 65.517 87 30 0 127 213 78 164 1.99e-31 128
Msa1383860 MtrunA17_Chr7g0252921 63.218 87 32 0 127 213 56 142 3.88e-29 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1383860 AT1G70940.1 50.085 591 182 13 228 721 66 640 6.24e-162 482
Msa1383860 AT2G01420.1 50.352 568 187 12 228 721 66 612 1.59e-161 480
Msa1383860 AT2G01420.2 50.088 567 194 11 228 721 66 616 7.35e-161 479
Msa1383860 AT1G23080.3 49.306 576 184 12 228 721 66 615 1.70e-155 465
Msa1383860 AT1G23080.4 49.306 576 184 12 228 721 66 615 1.70e-155 465
Msa1383860 AT1G23080.1 49.476 572 193 11 228 721 66 619 8.25e-155 463
Msa1383860 AT1G73590.1 50.087 577 185 16 228 721 66 622 1.96e-153 460
Msa1383860 AT5G57090.2 64.957 351 104 6 384 721 203 547 3.02e-139 421
Msa1383860 AT5G57090.2 89.796 98 10 0 265 362 2 99 1.22e-49 183
Msa1383860 AT5G57090.1 64.957 351 104 6 384 721 303 647 1.38e-137 420
Msa1383860 AT5G57090.1 85.185 135 19 1 228 362 66 199 3.42e-68 237
Msa1383860 AT1G77110.1 44.129 528 236 17 229 721 67 570 3.09e-116 362
Msa1383860 AT1G77110.2 42.885 506 230 17 229 699 67 548 1.76e-103 328
Msa1383860 AT2G01420.3 44.325 467 171 11 228 621 66 516 4.27e-100 318
Msa1383860 AT1G23080.2 43.067 476 163 12 228 621 66 515 2.38e-97 311
Msa1383860 AT5G15100.1 55.689 167 69 1 553 719 204 365 1.18e-52 187
Msa1383860 AT5G15100.1 48.235 85 39 1 251 335 93 172 2.40e-16 82.0
Msa1383860 AT5G16530.1 50.000 158 74 1 562 719 195 347 7.79e-47 170
Msa1383860 AT5G16530.1 39.597 149 77 3 229 377 67 202 8.84e-21 95.1
Msa1383860 AT5G16530.2 47.887 142 69 1 559 700 192 328 5.92e-39 147
Msa1383860 AT5G16530.2 39.597 149 77 3 229 377 67 202 6.24e-21 95.1
Msa1383860 AT3G04080.1 48.125 160 40 2 97 213 9 168 2.68e-32 131
Msa1383860 AT5G18280.1 50.311 161 36 1 97 213 9 169 7.75e-31 127

Find 205 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAAATCCTATGCTTTC+TGG 0.083914 tig0020628:+9031 Msa1383860:CDS
AGAGCTGCTTCTACTGATTT+TGG 0.180107 tig0020628:+9196 Msa1383860:CDS
TGCAGGCAACTGCAGGTTTA+AGG 0.182550 tig0020628:+7349 Msa1383860:intron
GACAAATTATTAACAAATAA+AGG 0.197004 tig0020628:-10698 Msa1383860:intergenic
CACCCAGTGCTGAGTATATT+TGG 0.231032 tig0020628:-10273 Msa1383860:intergenic
GAAATGCCATCTATTGTAAA+AGG 0.235112 tig0020628:+9777 Msa1383860:CDS
TTTGGTCTCTTGTATCATTT+AGG 0.244094 tig0020628:+9680 Msa1383860:CDS
ATAAGACTTGAGTAGGTATT+AGG 0.244249 tig0020628:-9649 Msa1383860:intergenic
CCATATCCCTCCTCCCTTCC+AGG 0.245535 tig0020628:-5387 Msa1383860:intergenic
CCTGGAAGGGAGGAGGGATA+TGG 0.250620 tig0020628:+5387 Msa1383860:CDS
AATACCTACTCAAGTCTTAT+AGG 0.254018 tig0020628:+9652 Msa1383860:CDS
GGAATCTTTGGTTTCACTTT+TGG 0.255771 tig0020628:+7179 Msa1383860:CDS
AGTTGGACGTTTGAGCATTT+TGG 0.261699 tig0020628:-6577 Msa1383860:intergenic
CTTCCAAGTCCATCTTCTTC+TGG 0.279820 tig0020628:-9531 Msa1383860:intergenic
TTGTTCTGCAAAGTGTTATT+TGG 0.283570 tig0020628:+8595 Msa1383860:CDS
CTTCAAACTGATGCTGAAAT+AGG 0.286348 tig0020628:+8753 Msa1383860:CDS
ATGTGTAACTCCTTGTTATT+AGG 0.289274 tig0020628:-9112 Msa1383860:intergenic
TCTTCCTAACACACTTGTTA+TGG 0.291487 tig0020628:+8512 Msa1383860:CDS
GTTACTTGTTGCAATTGTTC+AGG 0.293225 tig0020628:+10088 Msa1383860:CDS
GATCATTGGAAGATATAAAA+TGG 0.301610 tig0020628:-8352 Msa1383860:intergenic
ATCTTCTTCTGGCTAATATA+TGG 0.325305 tig0020628:-9520 Msa1383860:intergenic
ACAAATTATTAACAAATAAA+GGG 0.325575 tig0020628:-10697 Msa1383860:intergenic
ATACTCTACTATGTGCTTCT+TGG 0.327447 tig0020628:+10442 Msa1383860:CDS
TGGATGGAGATTGTATTCTT+TGG 0.334269 tig0020628:-10253 Msa1383860:intergenic
ATCAACTTTGAATGATGTTA+TGG 0.339187 tig0020628:-8697 Msa1383860:intergenic
TACTACTCTCAAACAATATC+AGG 0.342401 tig0020628:+6428 Msa1383860:CDS
TCTGATGTTGTTTCGCTTAA+CGG 0.342671 tig0020628:+8720 Msa1383860:CDS
GCAGCAAGCAGCGGAATCTT+TGG 0.343563 tig0020628:+7167 Msa1383860:CDS
CTTCCTAACACACTTGTTAT+GGG 0.344721 tig0020628:+8513 Msa1383860:CDS
CACATAGTAGAGTATTGTTA+TGG 0.345910 tig0020628:-10434 Msa1383860:intergenic
GACTTATCCTTATCATGGTT+TGG 0.355082 tig0020628:+9608 Msa1383860:CDS
AACTGCAGGTTTAAGGGCTT+TGG 0.359320 tig0020628:+7356 Msa1383860:CDS
TCTTGGAGTATGGTCTATCT+TGG 0.369042 tig0020628:+10459 Msa1383860:CDS
ACTATGTGCTTCTTGGAGTA+TGG 0.369176 tig0020628:+10449 Msa1383860:CDS
GTGTGCTGCAGGGTTATATT+TGG 0.369222 tig0020628:+10394 Msa1383860:intron
GAACCAGAAAGCATAGGATT+TGG 0.370922 tig0020628:-9034 Msa1383860:intergenic
TTAAGATTCCCTTCAGAAAC+AGG 0.372767 tig0020628:-9160 Msa1383860:intergenic
GGGAATGGAGATTGATCATC+TGG 0.381929 tig0020628:-10676 Msa1383860:intergenic
CAAGTCTTATAGGACTTGTT+TGG 0.388260 tig0020628:+9662 Msa1383860:CDS
CAAAGACACCAGTTCGAGTT+GGG 0.390510 tig0020628:+7238 Msa1383860:CDS
GCAGGCAACTGCAGGTTTAA+GGG 0.398221 tig0020628:+7350 Msa1383860:intron
AGGAGTTACACATGTTTGTT+TGG 0.398785 tig0020628:+9122 Msa1383860:CDS
ATTGTTTGAGAGTAGTATTA+AGG 0.400762 tig0020628:-6422 Msa1383860:intergenic
GGCAATCTCAATCTAATGTT+TGG 0.401491 tig0020628:+6394 Msa1383860:CDS
AGATGGACTTGGAAGGAGGA+GGG 0.406669 tig0020628:+9539 Msa1383860:CDS
GGGAGGATGAGAGGCGAGGG+AGG 0.414221 tig0020628:+5408 Msa1383860:CDS
ATTCCCATAACAAGTGTGTT+AGG 0.421389 tig0020628:-8516 Msa1383860:intergenic
AGAAAGGGATGTTGAAATTG+AGG 0.424348 tig0020628:+9483 Msa1383860:CDS
ATTATGATGTTGTGGCTTCA+AGG 0.425520 tig0020628:+10492 Msa1383860:exon
GGAGTCGGAGGAGTGGTTAT+CGG 0.427758 tig0020628:-6547 Msa1383860:intergenic
CTGGAAGGGAGGAGGGATAT+GGG 0.428125 tig0020628:+5388 Msa1383860:CDS
AAACATTAGATTGAGATTGC+CGG 0.431172 tig0020628:-6392 Msa1383860:intergenic
ACGGAATCTGTAGATCTTAT+CGG 0.432095 tig0020628:-6616 Msa1383860:intergenic
GACAAGACTTATCCTTATCA+TGG 0.432617 tig0020628:+9603 Msa1383860:CDS
TGCATAAGAAGAGGGGAGGG+AGG 0.434830 tig0020628:+8966 Msa1383860:CDS
TGGCCGTTGGATGTGGTGGC+AGG 0.434886 tig0020628:-6456 Msa1383860:intergenic
ATACTGTCTGATGCTGGTCT+TGG 0.436774 tig0020628:+9810 Msa1383860:CDS
CTTTCTGGTTCTACAAGTGC+TGG 0.444439 tig0020628:+9046 Msa1383860:CDS
ATTTGTTAATAATTTGTCAA+TGG 0.444644 tig0020628:+10703 Msa1383860:three_prime_UTR
CCACACACCCCAACTCGAAC+TGG 0.445500 tig0020628:-7246 Msa1383860:intergenic
TGTGTTAGGAAGAGTTGAAA+GGG 0.446908 tig0020628:-8502 Msa1383860:intergenic
CAATGTGAAATTCATGATCA+AGG 0.447137 tig0020628:-9755 Msa1383860:intergenic
TTTCCACATGCAATCAGCTT+AGG 0.449414 tig0020628:-9972 Msa1383860:intergenic
AGTCTTGTCATGACACTTGC+TGG 0.450412 tig0020628:-9589 Msa1383860:intergenic
AAAACCAAGATAGTCTTGAT+TGG 0.450593 tig0020628:+8463 Msa1383860:CDS
GAAAATATTGTTGCATCAAA+AGG 0.457227 tig0020628:+9250 Msa1383860:CDS
GATAGCATGGGTGGTGGAAG+TGG 0.457705 tig0020628:+9082 Msa1383860:CDS
AGGTTTAAGGGCTTTGGAAG+GGG 0.457955 tig0020628:+7362 Msa1383860:CDS
GCTCAAACGTCCAACTCGTC+AGG 0.458315 tig0020628:+6584 Msa1383860:CDS
AAGATGGACTTGGAAGGAGG+AGG 0.460717 tig0020628:+9538 Msa1383860:CDS
ACGGATACCAATTGCTATTG+AGG 0.461284 tig0020628:-10057 Msa1383860:intergenic
GTGAATCAGCTGCTAAGAAA+TGG 0.462800 tig0020628:-8389 Msa1383860:intergenic
TGGTCCAATCAAGACTATCT+TGG 0.466921 tig0020628:-8467 Msa1383860:intergenic
AGTGGTGAGTTGTTCAATAA+TGG 0.467127 tig0020628:+8995 Msa1383860:CDS
AGTCCTCGGAGTAGCCCCTT+TGG 0.467482 tig0020628:-8879 Msa1383860:intergenic
CACAAAGGGAACGATACCTT+GGG 0.473023 tig0020628:-10226 Msa1383860:intergenic
TATGGGAGGATGAGAGGCGA+GGG 0.473147 tig0020628:+5405 Msa1383860:CDS
GGAGAAGGTTTGATGGCGCC+TGG 0.475602 tig0020628:+5369 None:intergenic
AAGCGGAAGGTGTTGTTCCA+TGG 0.478410 tig0020628:+7205 Msa1383860:CDS
GAGGGATATGGGAGGATGAG+AGG 0.479760 tig0020628:+5399 Msa1383860:CDS
TAATTCATAGCAAGGATCAT+TGG 0.481448 tig0020628:-8366 None:intergenic
GATGGCGCCTGGAAGGGAGG+AGG 0.482537 tig0020628:+5380 None:intergenic
AAACTAGAGCCTCTTGGAGT+TGG 0.484261 tig0020628:-8853 Msa1383860:intergenic
ATCTCAATACTGTCTGATGC+TGG 0.484824 tig0020628:+9804 Msa1383860:CDS
GATGGACTTGGAAGGAGGAG+GGG 0.487071 tig0020628:+9540 Msa1383860:CDS
GGCTCATTCAAACAAATGAA+TGG 0.492041 tig0020628:+10514 Msa1383860:three_prime_UTR
GTCTTTGATCGCAATTCCCA+TGG 0.492227 tig0020628:-7222 Msa1383860:intergenic
GCGGCAACCTCAATAGCAAT+TGG 0.493077 tig0020628:+10050 Msa1383860:CDS
ACATAGTAGAGTATTGTTAT+GGG 0.493323 tig0020628:-10433 Msa1383860:intergenic
CAGGTTTAAGGGCTTTGGAA+GGG 0.494592 tig0020628:+7361 Msa1383860:CDS
CTGACCGTGGCCGTTGGATG+TGG 0.495023 tig0020628:-6463 Msa1383860:intergenic
TGGTTAAAACTAGAGCCTCT+TGG 0.498874 tig0020628:-8859 Msa1383860:intergenic
TTATGATGTTGTGGCTTCAA+GGG 0.499264 tig0020628:+10493 Msa1383860:exon
GTGTGTTAGGAAGAGTTGAA+AGG 0.500046 tig0020628:-8503 Msa1383860:intergenic
TATTCTTTGGCAAACACAAA+GGG 0.501329 tig0020628:-10240 Msa1383860:intergenic
CCAGAAAGCATAGGATTTGG+AGG 0.501646 tig0020628:-9031 Msa1383860:intergenic
AGAACATGAGTCTTAGAGAA+AGG 0.505648 tig0020628:+9467 Msa1383860:CDS
TCTTCGCAATTTGAAGTCCT+CGG 0.505766 tig0020628:-8923 Msa1383860:intergenic
ATATATTAGCCAGAAGAAGA+TGG 0.507802 tig0020628:+9522 Msa1383860:CDS
ACACAAAGGGAACGATACCT+TGG 0.508083 tig0020628:-10227 Msa1383860:intergenic
ACAAATGTGATGAGAAGGAT+AGG 0.512412 tig0020628:-6663 Msa1383860:intergenic
CCTTCGAAATTTGAAGTCCT+CGG 0.514043 tig0020628:-8893 Msa1383860:intergenic
GGATGCATAAGAAGAGGGGA+GGG 0.515503 tig0020628:+8963 Msa1383860:CDS
AAGAAAGATAGCATGGGTGG+TGG 0.522398 tig0020628:+9076 Msa1383860:CDS
AAGGTTTGATGGCGCCTGGA+AGG 0.522666 tig0020628:+5373 None:intergenic
AGTGCTTCACCTGTTTCTGA+AGG 0.523459 tig0020628:+9151 Msa1383860:CDS
CATCCAAATATACTCAGCAC+TGG 0.523771 tig0020628:+10270 Msa1383860:CDS
TGCCGCAATCACAGTTGGAC+CGG 0.524372 tig0020628:-10033 Msa1383860:intergenic
ATATGGGAGGATGAGAGGCG+AGG 0.524948 tig0020628:+5404 Msa1383860:CDS
CGAGGACTTCAAATTTCGAA+GGG 0.525462 tig0020628:+8894 Msa1383860:CDS
AGCGGAAGGTGTTGTTCCAT+GGG 0.527585 tig0020628:+7206 Msa1383860:CDS
GCGGAGAGTTCGACGGAGGA+AGG 0.529188 tig0020628:-6501 Msa1383860:intergenic
GCAGGTTTAAGGGCTTTGGA+AGG 0.529646 tig0020628:+7360 Msa1383860:CDS
GAACATGAGTCTTAGAGAAA+GGG 0.530157 tig0020628:+9468 Msa1383860:CDS
CATAAAGAAGAAAGATAGCA+TGG 0.530910 tig0020628:+9069 Msa1383860:CDS
GTCTGATGCTGGTCTTGGAA+TGG 0.532632 tig0020628:+9815 Msa1383860:CDS
ATGGCTGTTAGGTTCTTGAC+CGG 0.534223 tig0020628:+10014 Msa1383860:CDS
CCGTTGGATGTGGTGGCAGG+TGG 0.535170 tig0020628:-6453 Msa1383860:intergenic
TAGCCAGAAGAAGATGGACT+TGG 0.535792 tig0020628:+9528 Msa1383860:CDS
TATTAACAAATAAAGGGGAA+TGG 0.537959 tig0020628:-10691 Msa1383860:intergenic
GTTATCGGAAGGAGGAGAAG+TGG 0.538367 tig0020628:-6532 Msa1383860:intergenic
AGGATGCATAAGAAGAGGGG+AGG 0.538999 tig0020628:+8962 Msa1383860:CDS
GCTATGTATGGTGATTTCTC+AGG 0.545619 tig0020628:+8552 Msa1383860:CDS
AGGGGAGGGAGGAGTATGAG+TGG 0.545646 tig0020628:+8977 Msa1383860:CDS
GAGGTTGCCGCAATCACAGT+TGG 0.546063 tig0020628:-10038 Msa1383860:intergenic
ACCGTGGCCGTTGGATGTGG+TGG 0.548274 tig0020628:-6460 Msa1383860:intergenic
TCATGTGGAACATATTTGGA+AGG 0.549434 tig0020628:-9229 Msa1383860:intergenic
CGGAGGAAGGTGATCGGTAA+CGG 0.550078 tig0020628:-6488 Msa1383860:intergenic
ATGGGTGGTGGAAGTGGCAA+TGG 0.550401 tig0020628:+9088 Msa1383860:CDS
GACCGGTCCAACTGTGATTG+CGG 0.556573 tig0020628:+10031 Msa1383860:CDS
GTGGTGATGCAGGCAACTGC+AGG 0.557963 tig0020628:+7342 Msa1383860:intron
GAGAGTGACTCCTGACGAGT+TGG 0.560863 tig0020628:-6594 Msa1383860:intergenic
GCCACCACATCCAACGGCCA+CGG 0.561052 tig0020628:+6459 Msa1383860:CDS
TGTGCCTGAAGGGTTCTAAC+CGG 0.561818 tig0020628:+6373 Msa1383860:intron
AGGTTTGATGGCGCCTGGAA+GGG 0.562081 tig0020628:+5374 None:intergenic
CCACCTGCCACCACATCCAA+CGG 0.562179 tig0020628:+6453 Msa1383860:CDS
AGAAATGGTAATTCATAGCA+AGG 0.563456 tig0020628:-8374 Msa1383860:intergenic
ATTTCAGCATCAGTTTGAAG+TGG 0.563565 tig0020628:-8750 Msa1383860:intergenic
CCGAGGACTTCAAATTTCGA+AGG 0.565058 tig0020628:+8893 Msa1383860:CDS
ATTGAGGATGCATAAGAAGA+GGG 0.566567 tig0020628:+8958 Msa1383860:CDS
AATTTAGATCTTGTTCACAT+TGG 0.568868 tig0020628:+6821 Msa1383860:CDS
TTTGGTGAATTCGGAGTCGG+AGG 0.569681 tig0020628:-6559 Msa1383860:intergenic
ATAAAATGGAAAGATAGTAA+TGG 0.571283 tig0020628:-8338 Msa1383860:intergenic
AAAGATTCCGCTGCTTGCTG+CGG 0.571438 tig0020628:-7165 Msa1383860:intergenic
TCAAAGACACCAGTTCGAGT+TGG 0.572147 tig0020628:+7237 Msa1383860:CDS
TTTGATGGCGCCTGGAAGGG+AGG 0.572958 tig0020628:+5377 None:intergenic
ATGGCGCCTGGAAGGGAGGA+GGG 0.574202 tig0020628:+5381 Msa1383860:CDS
GCAAATCAATTATGATGTTG+TGG 0.575994 tig0020628:+10484 Msa1383860:exon
GATGCTGAAATAGGTGAAGA+TGG 0.576751 tig0020628:+8762 Msa1383860:CDS
AAGTCCTATAAGACTTGAGT+AGG 0.579378 tig0020628:-9656 Msa1383860:intergenic
CAAATTATTAACAAATAAAG+GGG 0.580350 tig0020628:-10696 Msa1383860:intergenic
GAAAGCATAGGATTTGGAGG+AGG 0.582023 tig0020628:-9028 Msa1383860:intergenic
TGAGCATACGCACTCAAACC+AGG 0.584096 tig0020628:-7138 Msa1383860:intergenic
TCAATAGCAATTGGTATCCG+TGG 0.585503 tig0020628:+10059 Msa1383860:CDS
AGCATCAGACAGTATTGAGA+TGG 0.585685 tig0020628:-9802 Msa1383860:intergenic
CAGTGCTGAGTATATTTGGA+TGG 0.585744 tig0020628:-10269 Msa1383860:intergenic
CAACCTAAGCTGATTGCATG+TGG 0.587393 tig0020628:+9969 Msa1383860:CDS
CATACATAGCTCTTAAAAGA+GGG 0.587601 tig0020628:-8539 Msa1383860:intergenic
GTATTCTTTGGCAAACACAA+AGG 0.589188 tig0020628:-10241 Msa1383860:intergenic
CCATACATAGCTCTTAAAAG+AGG 0.589751 tig0020628:-8540 Msa1383860:intergenic
TGAAAGGGAGAAAAGTGTAA+TGG 0.590561 tig0020628:-8487 Msa1383860:intergenic
ACAGCACAAATGTGATGAGA+AGG 0.593154 tig0020628:-6668 Msa1383860:intergenic
AGGAGGAGAAGTGGATTGAA+CGG 0.595772 tig0020628:-6523 Msa1383860:intergenic
CATTGAGGATGCATAAGAAG+AGG 0.597713 tig0020628:+8957 Msa1383860:CDS
GAAGGGAGGAGGGATATGGG+AGG 0.598960 tig0020628:+5391 Msa1383860:CDS
GTGCTTCACCTGTTTCTGAA+GGG 0.599388 tig0020628:+9152 Msa1383860:CDS
AAAGCATAGGATTTGGAGGA+GGG 0.604256 tig0020628:-9027 Msa1383860:intergenic
ATATTGAATTCTATTAGAGA+AGG 0.604979 tig0020628:+10559 Msa1383860:three_prime_UTR
GTTCGACGGAGGAAGGTGAT+CGG 0.608673 tig0020628:-6494 Msa1383860:intergenic
AGATTGATCATCTGGAAATG+TGG 0.610600 tig0020628:-10668 Msa1383860:intergenic
TGAATTCTATTAGAGAAGGA+CGG 0.610862 tig0020628:+10563 Msa1383860:three_prime_UTR
AAAGACACCAGTTCGAGTTG+GGG 0.616668 tig0020628:+7239 Msa1383860:CDS
CAGAAGAAGATGGACTTGGA+AGG 0.618184 tig0020628:+9532 Msa1383860:CDS
AAGAAGATGGACTTGGAAGG+AGG 0.619267 tig0020628:+9535 Msa1383860:CDS
CAAATGTGATGAGAAGGATA+GGG 0.622119 tig0020628:-6662 Msa1383860:intergenic
GATTGATCATCTGGAAATGT+GGG 0.623047 tig0020628:-10667 Msa1383860:intergenic
TTGCAGGCTGCACTTCCCCA+AGG 0.623512 tig0020628:+10210 Msa1383860:intron
TCAGAAACCGCAGCAAGCAG+CGG 0.624986 tig0020628:+7158 Msa1383860:CDS
TGATTTCTCAGGAAATCTCA+TGG 0.626161 tig0020628:+8563 Msa1383860:CDS
CTTGTAGAACCAGAAAGCAT+AGG 0.628500 tig0020628:-9040 Msa1383860:intergenic
ATTTGATAAGATATTGCAAG+CGG 0.629667 tig0020628:+7389 Msa1383860:CDS
ATCCAAATATACTCAGCACT+GGG 0.630722 tig0020628:+10271 Msa1383860:CDS
GGTGAGTTGTTCAATAATGG+TGG 0.635458 tig0020628:+8998 Msa1383860:CDS
GAGGAGTGGTTATCGGAAGG+AGG 0.641438 tig0020628:-6540 Msa1383860:intergenic
ATAAGTACTTACACTGAACA+TGG 0.642188 tig0020628:-9838 Msa1383860:intergenic
TTGAACGGCGGAGAGTTCGA+CGG 0.643014 tig0020628:-6508 Msa1383860:intergenic
GATAAGATCTACAGATTCCG+TGG 0.643142 tig0020628:+6618 Msa1383860:CDS
TCGGAGGAGTGGTTATCGGA+AGG 0.643921 tig0020628:-6543 Msa1383860:intergenic
ATCGGTAACGGATCTGACCG+TGG 0.644280 tig0020628:-6476 Msa1383860:intergenic
AAGAAGAAAGATAGCATGGG+TGG 0.645222 tig0020628:+9073 Msa1383860:CDS
TCAAGAGAACCAACTCCAAG+AGG 0.646233 tig0020628:+8844 Msa1383860:intron
CTTGTCATGACACTTGCTGG+TGG 0.653465 tig0020628:-9586 Msa1383860:intergenic
AAGATGAGACATTGACATTG+AGG 0.656036 tig0020628:+8942 Msa1383860:CDS
TGAATTCGGAGTCGGAGGAG+TGG 0.659077 tig0020628:-6554 Msa1383860:intergenic
ATAAAGAAGAAAGATAGCAT+GGG 0.667546 tig0020628:+9070 Msa1383860:CDS
TAACCAAAGGGGCTACTCCG+AGG 0.672738 tig0020628:+8876 Msa1383860:CDS
TTGAGGATGCATAAGAAGAG+GGG 0.674550 tig0020628:+8959 Msa1383860:CDS
TGGCAATGGACCTAATAACA+AGG 0.683795 tig0020628:+9102 Msa1383860:CDS
GAGGACTTCAAATTTCGAAG+GGG 0.687103 tig0020628:+8895 Msa1383860:CDS
AAACAACAAGAAGAGTGCCA+CGG 0.689245 tig0020628:-6635 Msa1383860:intergenic
AACGGCGGAGAGTTCGACGG+AGG 0.690782 tig0020628:-6505 Msa1383860:intergenic
ATTTCGAAGGGGCTACTCCG+AGG 0.691389 tig0020628:+8906 Msa1383860:CDS
AGGAGAAGTGGATTGAACGG+CGG 0.708077 tig0020628:-6520 Msa1383850:intergenic
CAACAAGTAACAGAACTCCA+CGG 0.714866 tig0020628:-10076 Msa1383850:intergenic
ACAAAGGGAACGATACCTTG+GGG 0.759468 tig0020628:-10225 Msa1383850:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAGAACAAATTTTTTTTA+GGG - tig0020628:6294-6313 Msa1383860:intergenic 10.0%
!! TATTCCATAAAATAAAAAAA+TGG + tig0020628:6905-6924 Msa1383860:intron 10.0%
!! ACAAATTATTAACAAATAAA+GGG - tig0020628:10700-10719 Msa1383860:intergenic 10.0%
!! AAATTATCCTTATTAACTAT+TGG - tig0020628:5897-5916 Msa1383860:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + tig0020628:5896-5915 Msa1383860:intron 15.0%
!!! CAATAGAACAAATTTTTTTT+AGG - tig0020628:6295-6314 Msa1383860:intergenic 15.0%
!!! TGTTCCATTTTTTTATTTTA+TGG - tig0020628:6912-6931 Msa1383860:intergenic 15.0%
!!! AAATTTGAAATGAATTTATG+TGG + tig0020628:7323-7342 Msa1383860:intron 15.0%
!!! TGAATTCATCTATTTTTTTA+TGG + tig0020628:7653-7672 Msa1383860:intron 15.0%
!! ATGAGTAATAATTGATTATA+AGG - tig0020628:7859-7878 Msa1383860:intergenic 15.0%
!!! TGAAAGTTGATATATTTATA+GGG - tig0020628:9334-9353 Msa1383860:intergenic 15.0%
!!! ATGAAAGTTGATATATTTAT+AGG - tig0020628:9335-9354 Msa1383860:intergenic 15.0%
!!! TAATAGATTGAAGATTTTTT+TGG - tig0020628:9726-9745 Msa1383860:intergenic 15.0%
!!! TTTATTATGAATTTTTATGC+AGG + tig0020628:9930-9949 Msa1383860:intron 15.0%
!! ATAAACAACTAATTAGAATA+AGG - tig0020628:10165-10184 Msa1383860:intergenic 15.0%
!!! AATGTTTAATTTTAATTTGC+AGG + tig0020628:10194-10213 Msa1383860:intron 15.0%
!! CAAATTATTAACAAATAAAG+GGG - tig0020628:10699-10718 Msa1383860:intergenic 15.0%
!! GACAAATTATTAACAAATAA+AGG - tig0020628:10701-10720 Msa1383860:intergenic 15.0%
!!! ATTTGTTAATAATTTGTCAA+TGG + tig0020628:10703-10722 Msa1383860:three_prime_UTR 15.0%
!! GTAGTGTTAGATAAAATTAA+GGG - tig0020628:5682-5701 Msa1383860:intergenic 20.0%
!! TGTAGTGTTAGATAAAATTA+AGG - tig0020628:5683-5702 Msa1383860:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - tig0020628:5810-5829 Msa1383860:intergenic 20.0%
!!! TAGTTTTACAAGTAATACTT+TGG - tig0020628:5873-5892 Msa1383860:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + tig0020628:5887-5906 Msa1383860:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - tig0020628:5930-5949 Msa1383860:intergenic 20.0%
!! CTTTCTTTGCTAAAAAATAA+TGG - tig0020628:6059-6078 Msa1383860:intergenic 20.0%
!! TCTCGTTTAATTATAAACAT+AGG + tig0020628:7959-7978 Msa1383860:intron 20.0%
!!! GTGTATAAATTTGTTTAAGA+AGG - tig0020628:8049-8068 Msa1383860:intergenic 20.0%
!! ATAAAATGGAAAGATAGTAA+TGG - tig0020628:8341-8360 Msa1383860:intergenic 20.0%
!!! ATATTCTCCTAAGAAAATTT+TGG + tig0020628:9875-9894 Msa1383860:intron 20.0%
!!! AATTAAGCCAAAATTTTCTT+AGG - tig0020628:9885-9904 Msa1383860:intergenic 20.0%
!! TGAAATACTAAAACAGAATT+TGG + tig0020628:10368-10387 Msa1383860:intron 20.0%
!! ATATTGAATTCTATTAGAGA+AGG + tig0020628:10559-10578 Msa1383860:three_prime_UTR 20.0%
!!! ATTTTGATTCAAATGAAAGT+TGG + tig0020628:10633-10652 Msa1383860:three_prime_UTR 20.0%
!!! TTTTGATTCAAATGAAAGTT+GGG + tig0020628:10634-10653 Msa1383860:three_prime_UTR 20.0%
!!! TGGAAAAATCTTTTGATTAT+AGG + tig0020628:10723-10742 Msa1383860:three_prime_UTR 20.0%
!!! AAAATCTTTTGATTATAGGT+AGG + tig0020628:10727-10746 Msa1383860:three_prime_UTR 20.0%
!!! TTCAAAATGAGTATCGTTTT+AGG - tig0020628:5978-5997 Msa1383860:intergenic 25.0%
!!! AAACGATACTCATTTTGAAA+CGG + tig0020628:5979-5998 Msa1383860:intron 25.0%
!! GCTAATAAGTTAGCTTATAT+AGG - tig0020628:6033-6052 Msa1383860:intergenic 25.0%
!!! TACAAGTTTTGAAACTTCTA+AGG - tig0020628:6082-6101 Msa1383860:intergenic 25.0%
!! AATCTTTGACCAATTTTTGA+AGG + tig0020628:6140-6159 Msa1383860:intron 25.0%
!! ATCTTTGACCAATTTTTGAA+GGG + tig0020628:6141-6160 Msa1383860:intron 25.0%
! TCAAATTAACAGCATGATTT+CGG + tig0020628:6267-6286 Msa1383860:intron 25.0%
! GTGTTTATCATACATACTAA+AGG + tig0020628:6318-6337 Msa1383860:intron 25.0%
! ATTGTTTGAGAGTAGTATTA+AGG - tig0020628:6425-6444 Msa1383860:intergenic 25.0%
! CAAAATGAAAAACATGAACA+CGG - tig0020628:6796-6815 Msa1383860:intergenic 25.0%
! AATTTAGATCTTGTTCACAT+TGG + tig0020628:6821-6840 Msa1383860:CDS 25.0%
!! GGAACAATTTGCATTTTATT+AGG + tig0020628:6926-6945 Msa1383860:intron 25.0%
! GATATACAATTAAGCACAAT+AGG + tig0020628:7034-7053 Msa1383860:intron 25.0%
!!! TTTGTGTGTTGTTTTTATGA+AGG + tig0020628:7300-7319 Msa1383860:intron 25.0%
! ATTTGATAAGATATTGCAAG+CGG + tig0020628:7389-7408 Msa1383860:CDS 25.0%
! TTATTCAAATACACTCTTTG+CGG + tig0020628:7558-7577 Msa1383860:intron 25.0%
! GATGTGGAGATTAATTAAAA+GGG - tig0020628:7713-7732 Msa1383860:intergenic 25.0%
! TGATGTGGAGATTAATTAAA+AGG - tig0020628:7714-7733 Msa1383860:intergenic 25.0%
! AATTGATTATAAGGCTAAGT+AGG - tig0020628:7850-7869 Msa1383860:intergenic 25.0%
! ATTTGTTTAAGAAGGAAACA+TGG - tig0020628:8041-8060 Msa1383860:intergenic 25.0%
! CAGAGAAATTGTTATAACTA+GGG - tig0020628:8090-8109 Msa1383860:intergenic 25.0%
! ACAGAGAAATTGTTATAACT+AGG - tig0020628:8091-8110 Msa1383860:intergenic 25.0%
! AATATCATAGCAACATATAG+CGG - tig0020628:8233-8252 Msa1383860:intergenic 25.0%
! TTTATTCCATAACATTGATC+TGG - tig0020628:8293-8312 Msa1383860:intergenic 25.0%
!! TTATGGAATAAACCATTTTG+TGG + tig0020628:8301-8320 Msa1383860:intron 25.0%
! GATCATTGGAAGATATAAAA+TGG - tig0020628:8355-8374 Msa1383860:intergenic 25.0%
! ATCAACTTTGAATGATGTTA+TGG - tig0020628:8700-8719 Msa1383860:intergenic 25.0%
! ATAAAGAAGAAAGATAGCAT+GGG + tig0020628:9070-9089 Msa1383860:CDS 25.0%
!! ATTTTCATGTGGAACATATT+TGG - tig0020628:9236-9255 Msa1383860:intergenic 25.0%
! GAAAATATTGTTGCATCAAA+AGG + tig0020628:9250-9269 Msa1383860:CDS 25.0%
!!! TTGAAGATTTTTTTGGAGAT+TGG - tig0020628:9719-9738 Msa1383860:intergenic 25.0%
! TCTTAGGAGAATATAATGTT+TGG - tig0020628:9869-9888 Msa1383860:intergenic 25.0%
!!! ACATAGTAGAGTATTGTTAT+GGG - tig0020628:10436-10455 Msa1383860:intergenic 25.0%
! TATTAACAAATAAAGGGGAA+TGG - tig0020628:10694-10713 Msa1383860:intergenic 25.0%
GTGTTAGATAAAATTAAGGG+CGG - tig0020628:5679-5698 Msa1383860:intergenic 30.0%
!! GTAGTTGATAACAGATAAGT+GGG - tig0020628:5717-5736 Msa1383860:intergenic 30.0%
!! AGTAGTTGATAACAGATAAG+TGG - tig0020628:5718-5737 Msa1383860:intergenic 30.0%
! TTGTAATCTTGAGTTTTGCT+AGG + tig0020628:6097-6116 Msa1383860:intron 30.0%
TAATGTGTAGAGTAAGGATT+AGG - tig0020628:6168-6187 Msa1383860:intergenic 30.0%
AATCCTTACTCTACACATTA+TGG + tig0020628:6168-6187 Msa1383860:intron 30.0%
TTTGCATTTGAGAAGAGTAA+TGG - tig0020628:6247-6266 Msa1383860:intergenic 30.0%
CAAATTAACAGCATGATTTC+GGG + tig0020628:6268-6287 Msa1383860:intron 30.0%
AAACATTAGATTGAGATTGC+CGG - tig0020628:6395-6414 Msa1383860:intergenic 30.0%
TACTACTCTCAAACAATATC+AGG + tig0020628:6428-6447 Msa1383860:CDS 30.0%
!! TTTGAGCATTTTGGTGAATT+CGG - tig0020628:6571-6590 Msa1383860:intergenic 30.0%
!!! TATGCTGTTATTTTTGATGC+TGG + tig0020628:6767-6786 Msa1383860:intron 30.0%
! AACACAATTTTCTCTGCAAT+AGG + tig0020628:6872-6891 Msa1383860:intron 30.0%
TCACCAAAATTATTTGAGTG+TGG + tig0020628:6966-6985 Msa1383860:intron 30.0%
! GCATGTTAATTGATCCTTTT+TGG + tig0020628:7484-7503 Msa1383860:intron 30.0%
! TAAAGAGTGTGAAACCAAAA+AGG - tig0020628:7501-7520 Msa1383860:intergenic 30.0%
!!! TTTTTGGTTTCACACTCTTT+AGG + tig0020628:7500-7519 Msa1383860:intron 30.0%
!!! TCTTTAGGTGTTAGTTTTGA+GGG + tig0020628:7515-7534 Msa1383860:intron 30.0%
GAATTCACATCTCGTAAAAA+CGG - tig0020628:7640-7659 Msa1383860:intergenic 30.0%
AATGTTGTAGTAATGTGATG+TGG - tig0020628:7729-7748 Msa1383860:intergenic 30.0%
ATGTGCATGAACGTTTATAA+TGG + tig0020628:7822-7841 Msa1383860:intron 30.0%
TGTTAAGTCTTCTCTTATAG+AGG - tig0020628:7995-8014 Msa1383860:intergenic 30.0%
CTATCTATAACCATGATTAC+CGG + tig0020628:8140-8159 Msa1383860:intron 30.0%
TAATTCATAGCAAGGATCAT+TGG - tig0020628:8369-8388 Msa1383860:intergenic 30.0%
AGAAATGGTAATTCATAGCA+AGG - tig0020628:8377-8396 Msa1383860:intergenic 30.0%
CTTCAAAAAGTAGTTATCCT+TGG + tig0020628:8411-8430 Msa1383860:CDS 30.0%
! AAAACCAAGATAGTCTTGAT+TGG + tig0020628:8463-8482 Msa1383860:CDS 30.0%
CATACATAGCTCTTAAAAGA+GGG - tig0020628:8542-8561 Msa1383860:intergenic 30.0%
! TTGTTCTGCAAAGTGTTATT+TGG + tig0020628:8595-8614 Msa1383860:CDS 30.0%
CATAAAGAAGAAAGATAGCA+TGG + tig0020628:9069-9088 Msa1383860:CDS 30.0%
!! ATGTGTAACTCCTTGTTATT+AGG - tig0020628:9115-9134 Msa1383860:intergenic 30.0%
! GATGCAACAATATTTTCATG+TGG - tig0020628:9247-9266 Msa1383860:intergenic 30.0%
! ATCTTCTTCTGGCTAATATA+TGG - tig0020628:9523-9542 Msa1383860:intergenic 30.0%
ATATATTAGCCAGAAGAAGA+TGG + tig0020628:9522-9541 Msa1383860:CDS 30.0%
ATAAGACTTGAGTAGGTATT+AGG - tig0020628:9652-9671 Msa1383860:intergenic 30.0%
! AATACCTACTCAAGTCTTAT+AGG + tig0020628:9652-9671 Msa1383860:CDS 30.0%
TTTGGTCTCTTGTATCATTT+AGG + tig0020628:9680-9699 Msa1383860:CDS 30.0%
CAATGTGAAATTCATGATCA+AGG - tig0020628:9758-9777 Msa1383860:intergenic 30.0%
GAAATGCCATCTATTGTAAA+AGG + tig0020628:9777-9796 Msa1383860:CDS 30.0%
! ATGGAACCTTTTACAATAGA+TGG - tig0020628:9786-9805 Msa1383860:intergenic 30.0%
ATAAGTACTTACACTGAACA+TGG - tig0020628:9841-9860 Msa1383860:intergenic 30.0%
TATTCTTTGGCAAACACAAA+GGG - tig0020628:10243-10262 Msa1383860:intergenic 30.0%
AGAAAATGCAAGTGATTATG+CGG + tig0020628:10339-10358 Msa1383860:intron 30.0%
!! CACATAGTAGAGTATTGTTA+TGG - tig0020628:10437-10456 Msa1383860:intergenic 30.0%
GCAAATCAATTATGATGTTG+TGG + tig0020628:10484-10503 Msa1383860:exon 30.0%
TGAATTCTATTAGAGAAGGA+CGG + tig0020628:10563-10582 Msa1383860:three_prime_UTR 30.0%
!! AAGCGACACTCATTTTGAAA+CGG - tig0020628:5745-5764 Msa1383860:intergenic 35.0%
!! TTTCAAAATGAGTGTCGCTT+TGG + tig0020628:5745-5764 Msa1383860:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - tig0020628:5844-5863 Msa1383860:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - tig0020628:5848-5867 Msa1383860:intergenic 35.0%
!!! GATACTCATTTTGAAACGGA+GGG + tig0020628:5983-6002 Msa1383860:intron 35.0%
!! AGTTTTGCTAGGTAAGTTGA+AGG + tig0020628:6108-6127 Msa1383860:intron 35.0%
GATTAGGACCCTTCAAAAAT+TGG - tig0020628:6152-6171 Msa1383860:intergenic 35.0%
CATCCATAATGTGTAGAGTA+AGG - tig0020628:6174-6193 Msa1383860:intergenic 35.0%
CTTACTCTACACATTATGGA+TGG + tig0020628:6172-6191 Msa1383860:intron 35.0%
! AGAAGAGTAATGGAGAATCT+GGG - tig0020628:6237-6256 Msa1383860:intergenic 35.0%
GGCAATCTCAATCTAATGTT+TGG + tig0020628:6394-6413 Msa1383860:CDS 35.0%
ACGGAATCTGTAGATCTTAT+CGG - tig0020628:6619-6638 Msa1383860:intergenic 35.0%
CAAATGTGATGAGAAGGATA+GGG - tig0020628:6665-6684 Msa1383860:intergenic 35.0%
ACAAATGTGATGAGAAGGAT+AGG - tig0020628:6666-6685 Msa1383860:intergenic 35.0%
! ATTAAGAAGTGCGTAATCTC+CGG - tig0020628:6711-6730 Msa1383860:intergenic 35.0%
GAGATTACGCACTTCTTAAT+CGG + tig0020628:6711-6730 Msa1383860:intron 35.0%
CTTTCGCCTGATAAAAAATC+TGG + tig0020628:6737-6756 Msa1383860:intron 35.0%
! AGATCTTGAACTTTTCGAAC+AGG + tig0020628:6847-6866 Msa1383860:CDS 35.0%
! GTGCCACACTCAAATAATTT+TGG - tig0020628:6972-6991 Msa1383860:intergenic 35.0%
!! GGAATCTTTGGTTTCACTTT+TGG + tig0020628:7179-7198 Msa1383860:CDS 35.0%
! ATGAATTTATGTGGTGATGC+AGG + tig0020628:7332-7351 Msa1383860:intron 35.0%
TGTGAATGATGTTCTTTGCT+GGG - tig0020628:7461-7480 Msa1383860:intergenic 35.0%
TTGTGAATGATGTTCTTTGC+TGG - tig0020628:7462-7481 Msa1383860:intergenic 35.0%
!!! CTCTTTAGGTGTTAGTTTTG+AGG + tig0020628:7514-7533 Msa1383860:intron 35.0%
CGTTCATGCACATGTAAAAT+GGG - tig0020628:7815-7834 Msa1383860:intergenic 35.0%
ACGTTCATGCACATGTAAAA+TGG - tig0020628:7816-7835 Msa1383860:intergenic 35.0%
! GATTTTCTATGAGATGGTAG+AGG - tig0020628:7885-7904 Msa1383860:intergenic 35.0%
GTTCAAATGTAGACAGAAGA+GGG - tig0020628:7911-7930 Msa1383860:intergenic 35.0%
AGTTCAAATGTAGACAGAAG+AGG - tig0020628:7912-7931 Msa1383860:intergenic 35.0%
TCATGGTTATAGATAGGTCA+AGG - tig0020628:8136-8155 Msa1383860:intergenic 35.0%
CGGTAATCATGGTTATAGAT+AGG - tig0020628:8142-8161 Msa1383860:intergenic 35.0%
TATAACCATGATTACCGGTA+CGG + tig0020628:8145-8164 Msa1383860:intron 35.0%
AACATCGTATATATCCGTAC+CGG - tig0020628:8162-8181 Msa1383860:intergenic 35.0%
TTCACACCAGATCAATGTTA+TGG + tig0020628:8284-8303 Msa1383860:intron 35.0%
! TGGAATAAACCATTTTGTGG+CGG + tig0020628:8304-8323 Msa1383860:intron 35.0%
!!! TCCTTGGTGCTCTTTTTATA+TGG + tig0020628:8427-8446 Msa1383860:CDS 35.0%
!! TCCATATAAAAAGAGCACCA+AGG - tig0020628:8431-8450 Msa1383860:intergenic 35.0%
! TGAAAGGGAGAAAAGTGTAA+TGG - tig0020628:8490-8509 Msa1383860:intergenic 35.0%
TGTGTTAGGAAGAGTTGAAA+GGG - tig0020628:8505-8524 Msa1383860:intergenic 35.0%
! TCTTCCTAACACACTTGTTA+TGG + tig0020628:8512-8531 Msa1383860:CDS 35.0%
!! CTTCCTAACACACTTGTTAT+GGG + tig0020628:8513-8532 Msa1383860:CDS 35.0%
ATTCCCATAACAAGTGTGTT+AGG - tig0020628:8519-8538 Msa1383860:intergenic 35.0%
CCATACATAGCTCTTAAAAG+AGG - tig0020628:8543-8562 Msa1383860:intergenic 35.0%
!! CCTCTTTTAAGAGCTATGTA+TGG + tig0020628:8540-8559 Msa1383860:CDS 35.0%
TGATTTCTCAGGAAATCTCA+TGG + tig0020628:8563-8582 Msa1383860:CDS 35.0%
!! TCTGATGTTGTTTCGCTTAA+CGG + tig0020628:8720-8739 Msa1383860:CDS 35.0%
ATTTCAGCATCAGTTTGAAG+TGG - tig0020628:8753-8772 Msa1383860:intergenic 35.0%
CTTCAAACTGATGCTGAAAT+AGG + tig0020628:8753-8772 Msa1383860:CDS 35.0%
TTGAACAGAAATCTCAACAC+TGG - tig0020628:8821-8840 Msa1383860:intergenic 35.0%
!!! AGGCTCTAGTTTTAACCAAA+GGG + tig0020628:8864-8883 Msa1383860:CDS 35.0%
AAGATGAGACATTGACATTG+AGG + tig0020628:8942-8961 Msa1383860:CDS 35.0%
ATTGAGGATGCATAAGAAGA+GGG + tig0020628:8958-8977 Msa1383860:CDS 35.0%
AGTGGTGAGTTGTTCAATAA+TGG + tig0020628:8995-9014 Msa1383860:CDS 35.0%
AGGAGTTACACATGTTTGTT+TGG + tig0020628:9122-9141 Msa1383860:CDS 35.0%
TTAAGATTCCCTTCAGAAAC+AGG - tig0020628:9163-9182 Msa1383860:intergenic 35.0%
TCATGTGGAACATATTTGGA+AGG - tig0020628:9232-9251 Msa1383860:intergenic 35.0%
AGATCATGTACAAGATTGCA+AGG - tig0020628:9392-9411 Msa1383860:intergenic 35.0%
AGAACATGAGTCTTAGAGAA+AGG + tig0020628:9467-9486 Msa1383860:CDS 35.0%
GAACATGAGTCTTAGAGAAA+GGG + tig0020628:9468-9487 Msa1383860:CDS 35.0%
AGAAAGGGATGTTGAAATTG+AGG + tig0020628:9483-9502 Msa1383860:CDS 35.0%
GACAAGACTTATCCTTATCA+TGG + tig0020628:9603-9622 Msa1383860:CDS 35.0%
GACTTATCCTTATCATGGTT+TGG + tig0020628:9608-9627 Msa1383860:CDS 35.0%
! GTTTTCTCCAAACCATGATA+AGG - tig0020628:9618-9637 Msa1383860:intergenic 35.0%
AAGTCCTATAAGACTTGAGT+AGG - tig0020628:9659-9678 Msa1383860:intergenic 35.0%
! CAAGTCTTATAGGACTTGTT+TGG + tig0020628:9662-9681 Msa1383860:CDS 35.0%
! TTTTTATGCAGGTCTGTTCA+TGG + tig0020628:9941-9960 Msa1383860:intron 35.0%
! GTTACTTGTTGCAATTGTTC+AGG + tig0020628:10088-10107 Msa1383860:CDS 35.0%
GTATTCTTTGGCAAACACAA+AGG - tig0020628:10244-10263 Msa1383860:intergenic 35.0%
TGGATGGAGATTGTATTCTT+TGG - tig0020628:10256-10275 Msa1383860:intergenic 35.0%
ATCCAAATATACTCAGCACT+GGG + tig0020628:10271-10290 Msa1383860:CDS 35.0%
ATACTCTACTATGTGCTTCT+TGG + tig0020628:10442-10461 Msa1383860:CDS 35.0%
ATTATGATGTTGTGGCTTCA+AGG + tig0020628:10492-10511 Msa1383860:exon 35.0%
TTATGATGTTGTGGCTTCAA+GGG + tig0020628:10493-10512 Msa1383860:exon 35.0%
GGCTCATTCAAACAAATGAA+TGG + tig0020628:10514-10533 Msa1383860:three_prime_UTR 35.0%
GATTGATCATCTGGAAATGT+GGG - tig0020628:10670-10689 Msa1383860:intergenic 35.0%
AGATTGATCATCTGGAAATG+TGG - tig0020628:10671-10690 Msa1383860:intergenic 35.0%
!! GTTGATAACAGATAAGTGGG+CGG - tig0020628:5714-5733 Msa1383860:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - tig0020628:5741-5760 Msa1383860:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - tig0020628:5845-5864 Msa1383860:intergenic 40.0%
!!! CGATACTCATTTTGAAACGG+AGG + tig0020628:5982-6001 Msa1383860:intron 40.0%
CTACACATTATGGATGGAAG+TGG + tig0020628:6178-6197 Msa1383860:intron 40.0%
! GAGAAGAGTAATGGAGAATC+TGG - tig0020628:6238-6257 Msa1383860:intergenic 40.0%
!! CATTTTGGTGAATTCGGAGT+CGG - tig0020628:6565-6584 Msa1383860:intergenic 40.0%
! AGTTGGACGTTTGAGCATTT+TGG - tig0020628:6580-6599 Msa1383860:intergenic 40.0%
GATAAGATCTACAGATTCCG+TGG + tig0020628:6618-6637 Msa1383860:CDS 40.0%
!! AAACAACAAGAAGAGTGCCA+CGG - tig0020628:6638-6657 Msa1383860:intergenic 40.0%
ACAGCACAAATGTGATGAGA+AGG - tig0020628:6671-6690 Msa1383860:intergenic 40.0%
TCGCCTGATAAAAAATCTGG+TGG + tig0020628:6740-6759 Msa1383860:intron 40.0%
!!! GAGCCACCAGATTTTTTATC+AGG - tig0020628:6746-6765 Msa1383860:intergenic 40.0%
!! GGTTTCACTTTTGGAGAAAG+CGG + tig0020628:7188-7207 Msa1383860:CDS 40.0%
!!! GGGTGTGTGGTTTTGTTTTT+TGG + tig0020628:7259-7278 Msa1383860:intron 40.0%
ACATCTCGTAAAAACGGCAA+CGG - tig0020628:7634-7653 Msa1383860:intergenic 40.0%
! GGGTTGGATTTTCTATGAGA+TGG - tig0020628:7891-7910 Msa1383860:intergenic 40.0%
AAATGTAGACAGAAGAGGGT+TGG - tig0020628:7907-7926 Msa1383860:intergenic 40.0%
! TATATCCGTACCGGTAATCA+TGG - tig0020628:8153-8172 Msa1383860:intergenic 40.0%
GCGATCATAGCAACATATAG+CGG - tig0020628:8200-8219 Msa1383860:intergenic 40.0%
! TAGCATACAGTTTAGTTCGC+TGG + tig0020628:8252-8271 Msa1383860:intron 40.0%
GTGAATCAGCTGCTAAGAAA+TGG - tig0020628:8392-8411 Msa1383860:intergenic 40.0%
TGGTCCAATCAAGACTATCT+TGG - tig0020628:8470-8489 Msa1383860:intergenic 40.0%
GTGTGTTAGGAAGAGTTGAA+AGG - tig0020628:8506-8525 Msa1383860:intergenic 40.0%
GCTATGTATGGTGATTTCTC+AGG + tig0020628:8552-8571 Msa1383860:CDS 40.0%
!!! GAAGCTGCAGTTTTAGGAAA+CGG - tig0020628:8678-8697 Msa1383860:intergenic 40.0%
! GTTATGGAAGCTGCAGTTTT+AGG - tig0020628:8684-8703 Msa1383860:intergenic 40.0%
GATGCTGAAATAGGTGAAGA+TGG + tig0020628:8762-8781 Msa1383860:CDS 40.0%
TGGTTAAAACTAGAGCCTCT+TGG - tig0020628:8862-8881 Msa1383860:intergenic 40.0%
!!! GAGGCTCTAGTTTTAACCAA+AGG + tig0020628:8863-8882 Msa1383860:CDS 40.0%
!!! GGCTCTAGTTTTAACCAAAG+GGG + tig0020628:8865-8884 Msa1383860:CDS 40.0%
! CCTTCGAAATTTGAAGTCCT+CGG - tig0020628:8896-8915 Msa1383860:intergenic 40.0%
CGAGGACTTCAAATTTCGAA+GGG + tig0020628:8894-8913 Msa1383860:CDS 40.0%
GAGGACTTCAAATTTCGAAG+GGG + tig0020628:8895-8914 Msa1383860:CDS 40.0%
! TCTTCGCAATTTGAAGTCCT+CGG - tig0020628:8926-8945 Msa1383860:intergenic 40.0%
CATTGAGGATGCATAAGAAG+AGG + tig0020628:8957-8976 Msa1383860:CDS 40.0%
TTGAGGATGCATAAGAAGAG+GGG + tig0020628:8959-8978 Msa1383860:CDS 40.0%
GGTGAGTTGTTCAATAATGG+TGG + tig0020628:8998-9017 Msa1383860:CDS 40.0%
AAAGCATAGGATTTGGAGGA+GGG - tig0020628:9030-9049 Msa1383860:intergenic 40.0%
! GAACCAGAAAGCATAGGATT+TGG - tig0020628:9037-9056 Msa1383860:intergenic 40.0%
! CTTGTAGAACCAGAAAGCAT+AGG - tig0020628:9043-9062 Msa1383860:intergenic 40.0%
AAGAAGAAAGATAGCATGGG+TGG + tig0020628:9073-9092 Msa1383860:CDS 40.0%
TGGCAATGGACCTAATAACA+AGG + tig0020628:9102-9121 Msa1383860:CDS 40.0%
!!! AGAGCTGCTTCTACTGATTT+TGG + tig0020628:9196-9215 Msa1383860:CDS 40.0%
! AGCATCAGACAGTATTGAGA+TGG - tig0020628:9805-9824 Msa1383860:intergenic 40.0%
ATCTCAATACTGTCTGATGC+TGG + tig0020628:9804-9823 Msa1383860:CDS 40.0%
TTTCCACATGCAATCAGCTT+AGG - tig0020628:9975-9994 Msa1383860:intergenic 40.0%
! ACGAGTTGCAACGTTTTCTA+TGG + tig0020628:9995-10014 Msa1383860:CDS 40.0%
! CAACGTTTTCTATGGCTGTT+AGG + tig0020628:10003-10022 Msa1383860:CDS 40.0%
! ACGGATACCAATTGCTATTG+AGG - tig0020628:10060-10079 Msa1383860:intergenic 40.0%
TCAATAGCAATTGGTATCCG+TGG + tig0020628:10059-10078 Msa1383860:CDS 40.0%
CAACAAGTAACAGAACTCCA+CGG - tig0020628:10079-10098 Msa1383860:intergenic 40.0%
! CAGTGCTGAGTATATTTGGA+TGG - tig0020628:10272-10291 Msa1383860:intergenic 40.0%
CATCCAAATATACTCAGCAC+TGG + tig0020628:10270-10289 Msa1383860:CDS 40.0%
ACTATGTGCTTCTTGGAGTA+TGG + tig0020628:10449-10468 Msa1383860:CDS 40.0%
TCTTGGAGTATGGTCTATCT+TGG + tig0020628:10459-10478 Msa1383860:CDS 40.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0020628:5742-5761 Msa1383860:intergenic 45.0%
ATAATGACGCAATCAACCCC+TGG + tig0020628:6350-6369 Msa1383860:intron 45.0%
!! AGGAGGAGAAGTGGATTGAA+CGG - tig0020628:6526-6545 Msa1383860:intergenic 45.0%
GTGCTTTATATGATGCCGTC+CGG + tig0020628:6689-6708 Msa1383860:intron 45.0%
! CGTGTTTTGCAGCTTAAACC+TGG + tig0020628:7120-7139 Msa1383860:intron 45.0%
!! TCACTTTTGGAGAAAGCGGA+AGG + tig0020628:7192-7211 Msa1383860:CDS 45.0%
GTCTTTGATCGCAATTCCCA+TGG - tig0020628:7225-7244 Msa1383860:intergenic 45.0%
TCAAAGACACCAGTTCGAGT+TGG + tig0020628:7237-7256 Msa1383860:CDS 45.0%
! CAAAGACACCAGTTCGAGTT+GGG + tig0020628:7238-7257 Msa1383860:CDS 45.0%
!! AAAGACACCAGTTCGAGTTG+GGG + tig0020628:7239-7258 Msa1383860:CDS 45.0%
AACTGCAGGTTTAAGGGCTT+TGG + tig0020628:7356-7375 Msa1383860:CDS 45.0%
!! CAGGTTTAAGGGCTTTGGAA+GGG + tig0020628:7361-7380 Msa1383860:CDS 45.0%
!! AGGTTTAAGGGCTTTGGAAG+GGG + tig0020628:7362-7381 Msa1383860:CDS 45.0%
GAAGGAAACATGGCTGAGAA+AGG - tig0020628:8031-8050 Msa1383860:intergenic 45.0%
! CATACAGTTTAGTTCGCTGG+TGG + tig0020628:8255-8274 Msa1383860:intron 45.0%
CTGCAAAAACCGCCACAAAA+TGG - tig0020628:8316-8335 Msa1383860:intergenic 45.0%
! CTGGTTAGATTTGAAGCTCG+TGG - tig0020628:8802-8821 Msa1383860:intergenic 45.0%
TCAAGAGAACCAACTCCAAG+AGG + tig0020628:8844-8863 Msa1383860:intron 45.0%
AAACTAGAGCCTCTTGGAGT+TGG - tig0020628:8856-8875 Msa1383860:intergenic 45.0%
CCGAGGACTTCAAATTTCGA+AGG + tig0020628:8893-8912 Msa1383860:CDS 45.0%
! GAAAGCATAGGATTTGGAGG+AGG - tig0020628:9031-9050 Msa1383860:intergenic 45.0%
! CCAGAAAGCATAGGATTTGG+AGG - tig0020628:9034-9053 Msa1383860:intergenic 45.0%
CCTCCAAATCCTATGCTTTC+TGG + tig0020628:9031-9050 Msa1383860:CDS 45.0%
!! CTTTCTGGTTCTACAAGTGC+TGG + tig0020628:9046-9065 Msa1383860:CDS 45.0%
AAGAAAGATAGCATGGGTGG+TGG + tig0020628:9076-9095 Msa1383860:CDS 45.0%
!! AGTGCTTCACCTGTTTCTGA+AGG + tig0020628:9151-9170 Msa1383860:CDS 45.0%
!! GTGCTTCACCTGTTTCTGAA+GGG + tig0020628:9152-9171 Msa1383860:CDS 45.0%
! TAGCCAGAAGAAGATGGACT+TGG + tig0020628:9528-9547 Msa1383860:CDS 45.0%
CTTCCAAGTCCATCTTCTTC+TGG - tig0020628:9534-9553 Msa1383860:intergenic 45.0%
! CAGAAGAAGATGGACTTGGA+AGG + tig0020628:9532-9551 Msa1383860:CDS 45.0%
! AAGAAGATGGACTTGGAAGG+AGG + tig0020628:9535-9554 Msa1383860:CDS 45.0%
! AGTCTTGTCATGACACTTGC+TGG - tig0020628:9592-9611 Msa1383860:intergenic 45.0%
! ATACTGTCTGATGCTGGTCT+TGG + tig0020628:9810-9829 Msa1383860:CDS 45.0%
CAACCTAAGCTGATTGCATG+TGG + tig0020628:9969-9988 Msa1383860:CDS 45.0%
ATGGCTGTTAGGTTCTTGAC+CGG + tig0020628:10014-10033 Msa1383860:CDS 45.0%
ACAAAGGGAACGATACCTTG+GGG - tig0020628:10228-10247 Msa1383860:intergenic 45.0%
CACAAAGGGAACGATACCTT+GGG - tig0020628:10229-10248 Msa1383860:intergenic 45.0%
ACACAAAGGGAACGATACCT+TGG - tig0020628:10230-10249 Msa1383860:intergenic 45.0%
! CACCCAGTGCTGAGTATATT+TGG - tig0020628:10276-10295 Msa1383860:intergenic 45.0%
AATTTGGCATGTGTGCTGCA+GGG + tig0020628:10384-10403 Msa1383860:intron 45.0%
GTGTGCTGCAGGGTTATATT+TGG + tig0020628:10394-10413 Msa1383860:intron 45.0%
GGGAATGGAGATTGATCATC+TGG - tig0020628:10679-10698 Msa1383860:intergenic 45.0%
!!! TAATTAAATAAATCATTTTT+AGG + tig0020628:5630-5649 Msa1383860:intron 5.0%
!! ATAAAGTTTATAATAAAAAA+TGG - tig0020628:7936-7955 Msa1383860:intergenic 5.0%
! TGTGCCTGAAGGGTTCTAAC+CGG + tig0020628:6373-6392 Msa1383860:intron 50.0%
! ATTGCCGGTTAGAACCCTTC+AGG - tig0020628:6380-6399 Msa1383860:intergenic 50.0%
!! AGGAGAAGTGGATTGAACGG+CGG - tig0020628:6523-6542 Msa1383860:intergenic 50.0%
GTTATCGGAAGGAGGAGAAG+TGG - tig0020628:6535-6554 Msa1383860:intergenic 50.0%
TTTGGTGAATTCGGAGTCGG+AGG - tig0020628:6562-6581 Msa1383860:intergenic 50.0%
! AGAAGTGCGTAATCTCCGGA+CGG - tig0020628:6707-6726 Msa1383860:intergenic 50.0%
TGAGCATACGCACTCAAACC+AGG - tig0020628:7141-7160 Msa1383860:intergenic 50.0%
! AAAGATTCCGCTGCTTGCTG+CGG - tig0020628:7168-7187 Msa1383860:intergenic 50.0%
!! AAGCGGAAGGTGTTGTTCCA+TGG + tig0020628:7205-7224 Msa1383860:CDS 50.0%
!! AGCGGAAGGTGTTGTTCCAT+GGG + tig0020628:7206-7225 Msa1383860:CDS 50.0%
TGCAGGCAACTGCAGGTTTA+AGG + tig0020628:7349-7368 Msa1383860:intron 50.0%
GCAGGCAACTGCAGGTTTAA+GGG + tig0020628:7350-7369 Msa1383860:intron 50.0%
!! GCAGGTTTAAGGGCTTTGGA+AGG + tig0020628:7360-7379 Msa1383860:CDS 50.0%
GGGCAGTATTCAGTGATCTG+CGG - tig0020628:7795-7814 Msa1383860:intergenic 50.0%
AGGATGCATAAGAAGAGGGG+AGG + tig0020628:8962-8981 Msa1383860:CDS 50.0%
GGATGCATAAGAAGAGGGGA+GGG + tig0020628:8963-8982 Msa1383860:CDS 50.0%
! AAGATGGACTTGGAAGGAGG+AGG + tig0020628:9538-9557 Msa1383860:CDS 50.0%
! AGATGGACTTGGAAGGAGGA+GGG + tig0020628:9539-9558 Msa1383860:CDS 50.0%
! CTTGTCATGACACTTGCTGG+TGG - tig0020628:9589-9608 Msa1383860:intergenic 50.0%
!! GTCTGATGCTGGTCTTGGAA+TGG + tig0020628:9815-9834 Msa1383860:CDS 50.0%
GCGGCAACCTCAATAGCAAT+TGG + tig0020628:10050-10069 Msa1383860:CDS 50.0%
GAATTTGGCATGTGTGCTGC+AGG + tig0020628:10383-10402 Msa1383860:intron 50.0%
CTGGAAGGGAGGAGGGATAT+GGG + tig0020628:5388-5407 Msa1383860:CDS 55.0%
GAGGGATATGGGAGGATGAG+AGG + tig0020628:5399-5418 Msa1383860:CDS 55.0%
ATATGGGAGGATGAGAGGCG+AGG + tig0020628:5404-5423 Msa1383860:CDS 55.0%
TATGGGAGGATGAGAGGCGA+GGG + tig0020628:5405-5424 Msa1383860:CDS 55.0%
AGAACCCTTCAGGCACACCA+GGG - tig0020628:6370-6389 Msa1383860:intergenic 55.0%
TAGAACCCTTCAGGCACACC+AGG - tig0020628:6371-6390 Msa1383860:intergenic 55.0%
!! ATCGGTAACGGATCTGACCG+TGG - tig0020628:6479-6498 Msa1383860:intergenic 55.0%
CGGAGGAAGGTGATCGGTAA+CGG - tig0020628:6491-6510 Msa1383860:intergenic 55.0%
GTTCGACGGAGGAAGGTGAT+CGG - tig0020628:6497-6516 Msa1383860:intergenic 55.0%
TTGAACGGCGGAGAGTTCGA+CGG - tig0020628:6511-6530 Msa1383860:intergenic 55.0%
GAGGAGTGGTTATCGGAAGG+AGG - tig0020628:6543-6562 Msa1383860:intergenic 55.0%
TCGGAGGAGTGGTTATCGGA+AGG - tig0020628:6546-6565 Msa1383860:intergenic 55.0%
GGAGTCGGAGGAGTGGTTAT+CGG - tig0020628:6550-6569 Msa1383860:intergenic 55.0%
TGAATTCGGAGTCGGAGGAG+TGG - tig0020628:6557-6576 Msa1383860:intergenic 55.0%
GCTCAAACGTCCAACTCGTC+AGG + tig0020628:6584-6603 Msa1383860:CDS 55.0%
GAGAGTGACTCCTGACGAGT+TGG - tig0020628:6597-6616 Msa1383860:intergenic 55.0%
TCAGAAACCGCAGCAAGCAG+CGG + tig0020628:7158-7177 Msa1383860:CDS 55.0%
GCAGCAAGCAGCGGAATCTT+TGG + tig0020628:7167-7186 Msa1383860:CDS 55.0%
TAACCAAAGGGGCTACTCCG+AGG + tig0020628:8876-8895 Msa1383860:CDS 55.0%
ATTTCGAAGGGGCTACTCCG+AGG + tig0020628:8906-8925 Msa1383860:CDS 55.0%
TGCATAAGAAGAGGGGAGGG+AGG + tig0020628:8966-8985 Msa1383860:CDS 55.0%
!! GATAGCATGGGTGGTGGAAG+TGG + tig0020628:9082-9101 Msa1383860:CDS 55.0%
!! ATGGGTGGTGGAAGTGGCAA+TGG + tig0020628:9088-9107 Msa1383860:CDS 55.0%
! GATGGACTTGGAAGGAGGAG+GGG + tig0020628:9540-9559 Msa1383860:CDS 55.0%
GACCGGTCCAACTGTGATTG+CGG + tig0020628:10031-10050 Msa1383860:CDS 55.0%
TGCCGCAATCACAGTTGGAC+CGG - tig0020628:10036-10055 Msa1383860:intergenic 55.0%
GAGGTTGCCGCAATCACAGT+TGG - tig0020628:10041-10060 Msa1383860:intergenic 55.0%
CCATATCCCTCCTCCCTTCC+AGG - tig0020628:5390-5409 Msa1383860:intergenic 60.0%
CCTGGAAGGGAGGAGGGATA+TGG + tig0020628:5387-5406 Msa1383860:CDS 60.0%
GAAGGGAGGAGGGATATGGG+AGG + tig0020628:5391-5410 Msa1383860:CDS 60.0%
TCAACCCCTGGTGTGCCTGA+AGG + tig0020628:6362-6381 Msa1383860:intron 60.0%
CAACCCCTGGTGTGCCTGAA+GGG + tig0020628:6363-6382 Msa1383860:intron 60.0%
GAACCCTTCAGGCACACCAG+GGG - tig0020628:6369-6388 Msa1383860:intergenic 60.0%
CCACCTGCCACCACATCCAA+CGG + tig0020628:6453-6472 Msa1383860:CDS 60.0%
CCACACACCCCAACTCGAAC+TGG - tig0020628:7249-7268 Msa1383860:intergenic 60.0%
!! CCAGTTCGAGTTGGGGTGTG+TGG + tig0020628:7246-7265 Msa1383860:intron 60.0%
! GTGGTGATGCAGGCAACTGC+AGG + tig0020628:7342-7361 Msa1383860:intron 60.0%
AGTCCTCGGAGTAGCCCCTT+TGG - tig0020628:8882-8901 Msa1383860:intergenic 60.0%
! AGGGGAGGGAGGAGTATGAG+TGG + tig0020628:8977-8996 Msa1383860:CDS 60.0%
TTGCAGGCTGCACTTCCCCA+AGG + tig0020628:10210-10229 Msa1383860:intron 60.0%
ATGGCGCCTGGAAGGGAGGA+GGG + tig0020628:5381-5400 Msa1383860:CDS 65.0%
CCGTTGGATGTGGTGGCAGG+TGG - tig0020628:6456-6475 Msa1383860:intergenic 65.0%
TGGCCGTTGGATGTGGTGGC+AGG - tig0020628:6459-6478 Msa1383860:intergenic 65.0%
GCCACCACATCCAACGGCCA+CGG + tig0020628:6459-6478 Msa1383860:CDS 65.0%
ACCGTGGCCGTTGGATGTGG+TGG - tig0020628:6463-6482 Msa1383860:intergenic 65.0%
CTGACCGTGGCCGTTGGATG+TGG - tig0020628:6466-6485 Msa1383860:intergenic 65.0%
ACGGATCTGACCGTGGCCGT+TGG - tig0020628:6472-6491 Msa1383860:intergenic 65.0%
GCGGAGAGTTCGACGGAGGA+AGG - tig0020628:6504-6523 Msa1383860:intergenic 65.0%
AACGGCGGAGAGTTCGACGG+AGG - tig0020628:6508-6527 Msa1383860:intergenic 65.0%
GGGAGGATGAGAGGCGAGGG+AGG + tig0020628:5408-5427 Msa1383860:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0020628 gene 5381 10766 5381 ID=Msa1383860;Name=Msa1383860
tig0020628 mRNA 5381 10766 5381 ID=Msa1383860-mRNA-1;Parent=Msa1383860;Name=Msa1383860-mRNA-1;_AED=0.31;_eAED=0.32;_QI=0|0.54|0.5|0.91|1|1|12|268|730
tig0020628 exon 5381 5452 5381 ID=Msa1383860-mRNA-1:exon:8806;Parent=Msa1383860-mRNA-1
tig0020628 exon 6384 6688 6384 ID=Msa1383860-mRNA-1:exon:8807;Parent=Msa1383860-mRNA-1
tig0020628 exon 6793 6868 6793 ID=Msa1383860-mRNA-1:exon:8808;Parent=Msa1383860-mRNA-1
tig0020628 exon 7132 7260 7132 ID=Msa1383860-mRNA-1:exon:8809;Parent=Msa1383860-mRNA-1
tig0020628 exon 7354 7410 7354 ID=Msa1383860-mRNA-1:exon:8810;Parent=Msa1383860-mRNA-1
tig0020628 exon 8336 8783 8336 ID=Msa1383860-mRNA-1:exon:8811;Parent=Msa1383860-mRNA-1
tig0020628 exon 8849 9271 8849 ID=Msa1383860-mRNA-1:exon:8812;Parent=Msa1383860-mRNA-1
tig0020628 exon 9449 9701 9449 ID=Msa1383860-mRNA-1:exon:8813;Parent=Msa1383860-mRNA-1
tig0020628 exon 9752 9852 9752 ID=Msa1383860-mRNA-1:exon:8814;Parent=Msa1383860-mRNA-1
tig0020628 exon 9952 10109 9952 ID=Msa1383860-mRNA-1:exon:8815;Parent=Msa1383860-mRNA-1
tig0020628 exon 10216 10292 10216 ID=Msa1383860-mRNA-1:exon:8816;Parent=Msa1383860-mRNA-1
tig0020628 exon 10405 10766 10405 ID=Msa1383860-mRNA-1:exon:8817;Parent=Msa1383860-mRNA-1
tig0020628 CDS 5381 5452 5381 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 6384 6688 6384 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 6793 6868 6793 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 7132 7260 7132 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 7354 7410 7354 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 8336 8783 8336 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 8849 9271 8849 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 9449 9701 9449 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 9752 9852 9752 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 9952 10109 9952 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 10216 10292 10216 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 CDS 10405 10498 10405 ID=Msa1383860-mRNA-1:cds;Parent=Msa1383860-mRNA-1
tig0020628 three_prime_UTR 10499 10766 10499 ID=Msa1383860-mRNA-1:three_prime_utr;Parent=Msa1383860-mRNA-1
Gene Sequence

>Msa1383860

ATGGCGCCTGGAAGGGAGGAGGGATATGGGAGGATGAGAGGCGAGGGAGGAGTTAAATTAGATCGTTTGAAAGGTTCTAACCGGCAATCTCAATCTAATGTTTGGTCAAACCTTAATACTACTCTCAAACAATATCAGGCTCCACCTGCCACCACATCCAACGGCCACGGTCAGATCCGTTACCGATCACCTTCCTCCGTCGAACTCTCCGCCGTTCAATCCACTTCTCCTCCTTCCGATAACCACTCCTCCGACTCCGAATTCACCAAAATGCTCAAACGTCCAACTCGTCAGGAGTCACTCTCCGATAAGATCTACAGATTCCGTGGCACTCTTCTTGTTGTTTCGATCCCTATCCTTCTCATCACATTTGTGCTCCGTGTTCATGTTTTTCATTTTGATCAGAATTTAGATCTTGTTCACATTGGCAAAGATCTTGAACTTTTCGAACAGCTTAAACCTGGTTTGAGTGCGTATGCTCAGAAACCGCAGCAAGCAGCGGAATCTTTGGTTTCACTTTTGGAGAAAGCGGAAGGTGTTGTTCCATGGGAATTGCGATCAAAGACACCAGTTCGAGTTGGGGCAACTGCAGGTTTAAGGGCTTTGGAAGGGGATGCATTTGATAAGATATTGCAAGCGTTCCATTACTATCTTTCCATTTTATATCTTCCAATGATCCTTGCTATGAATTACCATTTCTTAGCAGCTGATTCACTTCAAAAAGTAGTTATCCTTGGTGCTCTTTTTATATGGAACACGTTCTCAAAAAACCAAGATAGTCTTGATTGGACCATTACACTTTTCTCCCTTTCAACTCTTCCTAACACACTTGTTATGGGAATCCCTCTTTTAAGAGCTATGTATGGTGATTTCTCAGGAAATCTCATGGTACAAATTGTTGTTCTGCAAAGTGTTATTTGGTACACTCTTATGTTGTTTTTGTTTGAAAATAGAGCTGCTAAACTTCTCATAACAGAACCGTTTCCTAAAACTGCAGCTTCCATAACATCATTCAAAGTTGATTCTGATGTTGTTTCGCTTAACGGTAGAGAACCACTTCAAACTGATGCTGAAATAGGTGAAGATGAGAACCAACTCCAAGAGGCTCTAGTTTTAACCAAAGGGGCTACTCCGAGGACTTCAAATTTCGAAGGGGCTACTCCGAGGACTTCAAATTGCGAAGATGAGACATTGACATTGAGGATGCATAAGAAGAGGGGAGGGAGGAGTATGAGTGGTGAGTTGTTCAATAATGGTGGTTCTTACCCTCCTCCAAATCCTATGCTTTCTGGTTCTACAAGTGCTGGCATAAAGAAGAAAGATAGCATGGGTGGTGGAAGTGGCAATGGACCTAATAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGAAGGGAATCTTAAACATGCAGTAAATAGAGCTGCTTCTACTGATTTTGGCACTATTGATCCTTCCAAATATGTTCCACATGAAAATATTGTTGCATCAAAAGCTGTAACTGAATTGATTGAGAACATGAGTCTTAGAGAAAGGGATGTTGAAATTGAGGAAGCAGTAAAGTCTCCATATATTAGCCAGAAGAAGATGGACTTGGAAGGAGGAGGGGATGTAAGCAAAAATACACAGATGCCACCAGCAAGTGTCATGACAAGACTTATCCTTATCATGGTTTGGAGAAAACTCATCAGAAATCCTAATACCTACTCAAGTCTTATAGGACTTGTTTGGTCTCTTGTATCATTTAGTATCCTTGATCATGAATTTCACATTGAAATGCCATCTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTTGGAATGGCCATGTTCAGTGTAAGTCTGTTCATGGCATTACAACCTAAGCTGATTGCATGTGGAAAACGAGTTGCAACGTTTTCTATGGCTGTTAGGTTCTTGACCGGTCCAACTGTGATTGCGGCAACCTCAATAGCAATTGGTATCCGTGGAGTTCTGTTACTTGTTGCAATTGTTCAGGCTGCACTTCCCCAAGGTATCGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCATCCAAATATACTCAGCACTGGGGTTATATTTGGTATGTTGATTGCATTGCCCATAACAATACTCTACTATGTGCTTCTTGGAGTATGGTCTATCTTGGATGCAAATCAATTATGA
Protein sequence

>Msa1383860

MAPGREEGYGRMRGEGGVKLDRLKGSNRQSQSNVWSNLNTTLKQYQAPPATTSNGHGQIRYRSPSSVELSAVQSTSPPSDNHSSDSEFTKMLKRPTRQESLSDKIYRFRGTLLVVSIPILLITFVLRVHVFHFDQNLDLVHIGKDLELFEQLKPGLSAYAQKPQQAAESLVSLLEKAEGVVPWELRSKTPVRVGATAGLRALEGDAFDKILQAFHYYLSILYLPMILAMNYHFLAADSLQKVVILGALFIWNTFSKNQDSLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSVIWYTLMLFLFENRAAKLLITEPFPKTAASITSFKVDSDVVSLNGREPLQTDAEIGEDENQLQEALVLTKGATPRTSNFEGATPRTSNCEDETLTLRMHKKRGGRSMSGELFNNGGSYPPPNPMLSGSTSAGIKKKDSMGGGSGNGPNNKELHMFVWSSSASPVSEGNLKHAVNRAASTDFGTIDPSKYVPHENIVASKAVTELIENMSLRERDVEIEEAVKSPYISQKKMDLEGGGDVSKNTQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFSILDHEFHIEMPSIVKGSISILSDAGLGMAMFSVSLFMALQPKLIACGKRVATFSMAVRFLTGPTVIAATSIAIGIRGVLLLVAIVQAALPQGIVPFVFAKEYNLHPNILSTGVIFGMLIALPITILYYVLLGVWSILDANQL*