AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0317970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0317970 MtrunA17_Chr2g0291651 98.636 220 3 0 1 220 1 220 1.17e-166 457
Msa0317970 MtrunA17_Chr4g0043521 89.744 195 20 0 5 199 3 197 1.33e-136 382
Msa0317970 MtrunA17_Chr1g0169861 74.766 214 54 0 7 220 53 266 1.05e-126 358
Msa0317970 MtrunA17_Chr4g0010271 75.648 193 47 0 7 199 3 195 1.21e-115 328
Msa0317970 MtrunA17_Chr7g0237561 75.648 193 47 0 7 199 3 195 5.74e-114 324
Msa0317970 MtrunA17_Chr2g0296021 64.186 215 77 0 6 220 2 216 1.09e-108 311
Msa0317970 MtrunA17_Chr7g0237521 67.876 193 62 0 7 199 3 195 1.06e-98 285
Msa0317970 MtrunA17_Chr1g0210521 58.009 231 76 3 6 217 2 230 1.71e-95 278
Msa0317970 MtrunA17_Chr1g0169851 64.384 146 37 1 61 191 8 153 4.79e-64 196
Msa0317970 MtrunA17_Chr4g0010211 76.636 107 25 0 68 174 3 109 8.85e-57 176
Msa0317970 MtrunA17_Chr4g0026121 35.789 190 119 3 10 198 3 190 1.49e-44 148
Msa0317970 MtrunA17_Chr5g0441741 39.474 190 112 3 10 198 3 190 5.46e-44 147
Msa0317970 MtrunA17_Chr4g0064371 31.604 212 137 4 10 216 3 211 8.39e-38 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0317970 AT1G04760.2 77.103 214 49 0 7 220 3 216 8.64e-121 342
Msa0317970 AT1G04760.1 77.103 214 49 0 7 220 3 216 8.64e-121 342
Msa0317970 AT2G33120.1 79.793 193 39 0 7 199 3 195 2.27e-119 338
Msa0317970 AT1G04750.1 79.275 193 40 0 7 199 3 195 2.72e-119 338
Msa0317970 AT2G32670.1 79.275 193 40 0 7 199 68 260 5.48e-118 337
Msa0317970 AT2G33120.2 76.119 201 40 1 7 199 3 203 5.57e-116 330
Msa0317970 AT3G54300.3 56.356 236 80 2 6 220 2 235 1.37e-96 281
Msa0317970 AT3G54300.2 56.356 236 80 2 6 220 2 235 1.37e-96 281
Msa0317970 AT3G54300.1 56.356 236 80 2 6 220 2 235 1.37e-96 281
Msa0317970 AT2G33110.1 64.249 193 65 1 7 199 3 191 2.31e-90 265
Msa0317970 AT2G33110.2 60.000 200 66 1 7 206 3 188 2.76e-85 251
Msa0317970 AT4G15780.1 63.483 178 64 1 7 183 3 180 2.87e-85 251
Msa0317970 AT1G04750.2 82.906 117 20 0 83 199 1 117 3.83e-69 208
Msa0317970 AT1G04750.4 82.906 117 20 0 83 199 1 117 3.83e-69 208
Msa0317970 AT1G04750.3 82.906 117 20 0 83 199 1 117 3.83e-69 208
Msa0317970 AT5G22360.1 35.211 213 134 3 10 220 3 213 2.58e-47 155
Msa0317970 AT5G11150.1 37.799 209 125 4 10 216 3 208 6.55e-47 154
Msa0317970 AT5G11150.2 37.799 209 125 4 10 216 3 208 1.12e-46 154
Msa0317970 AT4G32150.1 40.212 189 110 3 10 197 3 189 7.79e-45 149
Msa0317970 AT2G25340.1 36.508 189 117 3 10 197 3 189 3.53e-39 134
Msa0317970 AT2G33120.3 85.484 62 9 0 138 199 52 113 1.04e-31 113
Msa0317970 AT3G24890.2 56.383 94 35 2 117 204 14 107 1.44e-26 99.4
Msa0317970 AT3G24890.1 61.538 52 20 0 117 168 14 65 4.41e-15 68.2
Msa0317970 AT3G24890.4 61.538 52 20 0 117 168 14 65 4.41e-15 68.2
Msa0317970 AT3G24890.3 61.538 52 20 0 117 168 14 65 4.41e-15 68.2
Msa0317970 AT3G24890.5 61.538 52 20 0 117 168 14 65 4.41e-15 68.2

Find 71 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCAGTTGCTTCTGATTC+TGG 0.194659 2_4:+16199331 None:intergenic
GTTATATGTGAACTTGTTAT+TGG 0.244632 2_4:+16199206 None:intergenic
AAACTCCTTGTTAAGGCTAT+TGG 0.247487 2_4:+16197932 None:intergenic
ATTCGAACAAATCCTAATTA+TGG 0.266513 2_4:+16194611 None:intergenic
GCTCAAGTCTCTGAAGTTAA+AGG 0.272842 2_4:-16197737 Msa0317970:CDS
AATAGCCTTAACAAGGAGTT+TGG 0.289067 2_4:-16197930 Msa0317970:CDS
TTCAACTACCTTATCGATAA+TGG 0.302674 2_4:-16199168 Msa0317970:CDS
TCTTTCAGGCACAAGACTTC+AGG 0.328108 2_4:-16195171 Msa0317970:intron
AAGAAGAAGTTACAGAGAAA+TGG 0.329536 2_4:+16199470 None:intergenic
AGGAGAAAAGATAGAGCTTC+TGG 0.340382 2_4:-16196160 Msa0317970:CDS
AACTCCTTGTTAAGGCTATT+GGG 0.344900 2_4:+16197933 None:intergenic
TGCATATGTTCCTTCAACTT+TGG 0.346991 2_4:+16197809 None:intergenic
TGGGTTGTCTGTTTGAAGTT+TGG 0.353467 2_4:-16194874 Msa0317970:three_prime_UTR
GCACAAGACTTCAGGAGTTC+TGG 0.353752 2_4:-16195163 Msa0317970:CDS
GTGAACTTGTTATTGGTAGA+AGG 0.355927 2_4:+16199213 None:intergenic
GCCTCCCAACATCCATAATT+AGG 0.371731 2_4:-16194623 Msa0317970:three_prime_UTR
GCAAGCTTGCTTACCTCGTC+AGG 0.380382 2_4:+16197770 None:intergenic
AATAGTCCTTTCTGTGACTC+GGG 0.427414 2_4:-16195056 Msa0317970:CDS
ACAATAAAGGCCACAGAGAA+TGG 0.433247 2_4:+16195022 None:intergenic
AAATCCTAATTATGGATGTT+GGG 0.435717 2_4:+16194619 None:intergenic
GAGAAATGGATGAGAGAGAA+GGG 0.441451 2_4:+16199484 None:intergenic
CAAATCCTAATTATGGATGT+TGG 0.442776 2_4:+16194618 None:intergenic
GTCAATATGAATAATCTGAA+TGG 0.449962 2_4:+16194848 None:intergenic
AACTGGAAGACAGGTTCCTA+TGG 0.469337 2_4:-16198024 Msa0317970:CDS
TCTGCACAGGCCAAAGTTGA+AGG 0.478923 2_4:-16197819 Msa0317970:intron
AGTACCCAAACTCCTTGTTA+AGG 0.484076 2_4:+16197925 None:intergenic
TGTAATATAGATTACAAGTC+CGG 0.486485 2_4:-16194943 Msa0317970:three_prime_UTR
ATCCTTGACACGCTCTAGAA+AGG 0.487141 2_4:+16198001 None:intergenic
TACTGTAACCATTATCGATA+AGG 0.497078 2_4:+16199160 None:intergenic
ATAGCCTTAACAAGGAGTTT+GGG 0.499292 2_4:-16197929 Msa0317970:intron
CATGATGGAGAATATTGAAA+AGG 0.507884 2_4:-16197711 Msa0317970:intron
GTTGTTGCAGATGAATCAAC+TGG 0.511287 2_4:-16198041 Msa0317970:CDS
ACATACTAACCTGGTGATGA+AGG 0.513285 2_4:+16196121 None:intergenic
TTCTCAGATCTCTACTTCAA+TGG 0.513492 2_4:-16199361 Msa0317970:exon
GTTGAAGTTACCACTGAATT+CGG 0.515455 2_4:+16199266 None:intergenic
TCCAACCTTGTGATTATCCA+AGG 0.515718 2_4:-16194996 Msa0317970:three_prime_UTR
AGATGAATCAACTGGAAGAC+AGG 0.525547 2_4:-16198033 Msa0317970:CDS
AAGGTAAAGCTGATTGTGTT+GGG 0.526048 2_4:-16195103 Msa0317970:CDS
ATTATCGATAAGGTAGTTGA+AGG 0.526248 2_4:+16199170 None:intergenic
GTCAAAATATGGTGGTGAAA+AGG 0.526879 2_4:-16197970 Msa0317970:CDS
AGAGAAATGGATGAGAGAGA+AGG 0.528084 2_4:+16199483 None:intergenic
ACCTTGGATAATCACAAGGT+TGG 0.529695 2_4:+16194995 None:intergenic
TAATAGTCCTTTCTGTGACT+CGG 0.535657 2_4:-16195057 Msa0317970:CDS
GAACAAAGTGACAACTTCTC+CGG 0.555270 2_4:+16194924 None:intergenic
TGAAGTTAAAGGTGTCATGA+TGG 0.558850 2_4:-16197726 Msa0317970:CDS
TCACAGAAAGGACTATTATG+AGG 0.569630 2_4:+16195062 None:intergenic
TTGAAGTAGAGATCTGAGAA+TGG 0.581678 2_4:+16199364 None:intergenic
ATTATCCCCGAGTCACAGAA+AGG 0.585496 2_4:+16195050 None:intergenic
GAAGGTAAAGCTGATTGTGT+TGG 0.587770 2_4:-16195104 Msa0317970:CDS
GACTGATAACCTTCATCACC+AGG 0.599827 2_4:-16196130 Msa0317970:intron
AATGTGGCTGCAAAACATGA+AGG 0.607769 2_4:-16195122 Msa0317970:CDS
CGAGGTAAGCAAGCTTGCAA+AGG 0.611296 2_4:-16197765 Msa0317970:CDS
ATCTACGCTTTCGTATCAAG+AGG 0.614595 2_4:-16199312 Msa0317970:CDS
CTGAAGACACTGAAAAGCGA+TGG 0.625193 2_4:+16199242 None:intergenic
TAGATATTGAACATTGCTTG+CGG 0.625457 2_4:-16194685 Msa0317970:three_prime_UTR
CATGCATTGACATCTTACCT+TGG 0.626816 2_4:+16194979 None:intergenic
AGAAAAGATAGAGCTTCTGG+TGG 0.627737 2_4:-16196157 Msa0317970:CDS
GGCCTTTCTAGAGCGTGTCA+AGG 0.628423 2_4:-16198003 Msa0317970:CDS
TCCTCCCAATAGCCTTAACA+AGG 0.630731 2_4:-16197937 Msa0317970:CDS
CAAGGTAAGATGTCAATGCA+TGG 0.630887 2_4:-16194978 Msa0317970:three_prime_UTR
TTGAATGTTGATTTGAGCCG+TGG 0.631979 2_4:-16194743 Msa0317970:three_prime_UTR
TCCTAATTATGGATGTTGGG+AGG 0.654401 2_4:+16194622 None:intergenic
ATAGTCCTTTCTGTGACTCG+GGG 0.656970 2_4:-16195055 Msa0317970:CDS
GCTGAATTCACCGAATTCAG+TGG 0.657022 2_4:-16199276 Msa0317970:CDS
TTAATGTAGGTTCTAGACAG+AGG 0.657601 2_4:-16196180 Msa0317970:intron
ACACGCTCTAGAAAGGCCAT+AGG 0.658618 2_4:+16198008 None:intergenic
TCTTACCTTGGATAATCACA+AGG 0.660528 2_4:+16194991 None:intergenic
CTGTGTTGATCATCCTGACG+AGG 0.660999 2_4:-16197783 Msa0317970:CDS
TCCTTGTTAAGGCTATTGGG+AGG 0.681305 2_4:+16197936 None:intergenic
ATAATAAGCACCATTCTCTG+TGG 0.712745 2_4:-16195032 Msa0317970:exon
TGAATTCGGTGAATTCAGCG+AGG 0.767966 2_4:+16199280 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTAATATATTTGCT+TGG - chr2_4:16195134-16195153 Msa0317970:CDS 10.0%
!! AATTGAATGAAATTTATGTA+TGG - chr2_4:16195188-16195207 Msa0317970:intron 15.0%
!! ATACGATTTAATGATTAATA+TGG - chr2_4:16195635-16195654 Msa0317970:intron 15.0%
!! TACGATTTAATGATTAATAT+GGG - chr2_4:16195636-16195655 Msa0317970:intron 15.0%
!!! CTATAAGTTTTTTTATATGT+TGG + chr2_4:16195860-16195879 None:intergenic 15.0%
!!! TATTTTTTTTCACAAAACTT+GGG + chr2_4:16196690-16196709 None:intergenic 15.0%
!!! TTATTTTTTTTCACAAAACT+TGG + chr2_4:16196691-16196710 None:intergenic 15.0%
!!! ATTTACCTTTTAAAAAAGTA+TGG + chr2_4:16197069-16197088 None:intergenic 15.0%
!!! ATATGATTTAAAATTCTTGT+GGG + chr2_4:16197456-16197475 None:intergenic 15.0%
!!! TATATGATTTAAAATTCTTG+TGG + chr2_4:16197457-16197476 None:intergenic 15.0%
!! TATGAACTAAAAAAAATCTA+AGG + chr2_4:16197746-16197765 None:intergenic 15.0%
!!! TATATTCTTTAAAAACAAGT+GGG + chr2_4:16198242-16198261 None:intergenic 15.0%
!!! ATATATTCTTTAAAAACAAG+TGG + chr2_4:16198243-16198262 None:intergenic 15.0%
!! ACATATTATCATATATGTAT+GGG + chr2_4:16198697-16198716 None:intergenic 15.0%
!! AACATATTATCATATATGTA+TGG + chr2_4:16198698-16198717 None:intergenic 15.0%
!! CAAAATTTAACATTGAAAAA+TGG + chr2_4:16199344-16199363 None:intergenic 15.0%
!! TTTAATATATTTGCTTGGAT+TGG - chr2_4:16195139-16195158 Msa0317970:CDS 20.0%
!!! ATGTATGGACTAAATTTTAA+CGG - chr2_4:16195203-16195222 Msa0317970:intron 20.0%
!!! TTTAACGGTTGTAAAATTTT+TGG - chr2_4:16195218-16195237 Msa0317970:intron 20.0%
!!! TTAACGGTTGTAAAATTTTT+GGG - chr2_4:16195219-16195238 Msa0317970:intron 20.0%
!! ATATTTAATCCTAGTTGTTT+AGG - chr2_4:16195251-16195270 Msa0317970:intron 20.0%
!! ATTAAAATGAATATTTGACC+TGG + chr2_4:16195322-16195341 None:intergenic 20.0%
!!! AATGATGATTTTATGCAAAA+TGG - chr2_4:16195455-16195474 Msa0317970:intron 20.0%
!!! ATGATGATTTTATGCAAAAT+GGG - chr2_4:16195456-16195475 Msa0317970:intron 20.0%
!! GAAGTAAAATTGTAAATAGT+GGG - chr2_4:16195484-16195503 Msa0317970:intron 20.0%
!!! TTGTATACTTTTACTCTTAA+TGG - chr2_4:16195692-16195711 Msa0317970:intron 20.0%
!! TATCAATATCAATACTTCAT+TGG + chr2_4:16196475-16196494 None:intergenic 20.0%
!! AAGATTCTCAATATAAGTTT+AGG + chr2_4:16196629-16196648 None:intergenic 20.0%
!!! CATTTGCTTTTTTTTTTTCA+TGG + chr2_4:16196743-16196762 None:intergenic 20.0%
!!! GAAATTCAAATGTTTTATGT+AGG - chr2_4:16196762-16196781 Msa0317970:intron 20.0%
!!! CAATGGTAGTTTTTTTTAAA+AGG - chr2_4:16196792-16196811 Msa0317970:intron 20.0%
!! ATATTAATGACATGATTTGA+CGG - chr2_4:16197163-16197182 Msa0317970:intron 20.0%
!! AAATTATAAGAATTGACTAC+AGG + chr2_4:16197228-16197247 None:intergenic 20.0%
!! TATCAATACATTTCCATATA+TGG - chr2_4:16197257-16197276 Msa0317970:intron 20.0%
!! AAAGTGTGTTAGTAATAATA+TGG + chr2_4:16197308-16197327 None:intergenic 20.0%
!! ATTATAAACACGAGATTAAT+TGG + chr2_4:16197904-16197923 None:intergenic 20.0%
!! TCGTGTTTATAATTTAATGT+AGG - chr2_4:16197911-16197930 Msa0317970:intron 20.0%
!! TATGCATTATTAGAGTTTAA+TGG - chr2_4:16198762-16198781 Msa0317970:intron 20.0%
!!! GTTATATGTGAACTTGTTAT+TGG + chr2_4:16194901-16194920 None:intergenic 25.0%
! ATGATCAATTGAACATAGTA+AGG + chr2_4:16195017-16195036 None:intergenic 25.0%
!! AGGATATAGATCATCTATTT+TGG - chr2_4:16195377-16195396 Msa0317970:intron 25.0%
!! GGATATAGATCATCTATTTT+GGG - chr2_4:16195378-16195397 Msa0317970:intron 25.0%
!!! TTTTTTGATAGTTATGCTCA+AGG - chr2_4:16195425-16195444 Msa0317970:intron 25.0%
! GGAAGTAAAATTGTAAATAG+TGG - chr2_4:16195483-16195502 Msa0317970:intron 25.0%
!! GTATACAAAGAATCCTATTT+TGG + chr2_4:16195680-16195699 None:intergenic 25.0%
!!! TTCTTTTTTTGCTTTGAGAT+TGG - chr2_4:16195808-16195827 Msa0317970:intron 25.0%
!!! TCTTTTTTTGCTTTGAGATT+GGG - chr2_4:16195809-16195828 Msa0317970:intron 25.0%
!! GATGATTTTGTGTCAAAATA+TGG - chr2_4:16196123-16196142 Msa0317970:intron 25.0%
!!! TAAACTTTTGGAGTTTAATC+TGG - chr2_4:16196214-16196233 Msa0317970:intron 25.0%
! AGATAAACTTCAAATCATTC+TGG - chr2_4:16196419-16196438 Msa0317970:intron 25.0%
! TTACATATGCGATTTGTAAA+AGG - chr2_4:16196592-16196611 Msa0317970:intron 25.0%
! TCAACAGAAAATCATTAAAC+AGG + chr2_4:16196932-16196951 None:intergenic 25.0%
! TGAAGTTTGAATTCAATAGA+TGG + chr2_4:16196972-16196991 None:intergenic 25.0%
!!! CCTTTTAAAAAAGTATGGTA+TGG + chr2_4:16197064-16197083 None:intergenic 25.0%
!!! CCATACCATACTTTTTTAAA+AGG - chr2_4:16197061-16197080 Msa0317970:intron 25.0%
! TCACAGATAAAAACCATATA+TGG + chr2_4:16197273-16197292 None:intergenic 25.0%
! CTTGTGACTATAATAACTAA+CGG - chr2_4:16197878-16197897 Msa0317970:intron 25.0%
!! TAGAAAGAAGATTTCTCTTT+TGG - chr2_4:16198089-16198108 Msa0317970:intron 25.0%
! CTATAGAAATGATATTCTTC+TGG - chr2_4:16198155-16198174 Msa0317970:intron 25.0%
!!! ATTATTATTTTGCTGTCAAG+TGG + chr2_4:16198833-16198852 None:intergenic 25.0%
!! GATTTTGTATTTTCTCTTTC+AGG - chr2_4:16198919-16198938 Msa0317970:intron 25.0%
! TGTAATATAGATTACAAGTC+CGG - chr2_4:16199161-16199180 Msa0317970:intron 25.0%
! GTCAATATGAATAATCTGAA+TGG + chr2_4:16199259-16199278 None:intergenic 25.0%
! ACATTGAAAAATGGTAGATT+TGG + chr2_4:16199335-16199354 None:intergenic 25.0%
! AAATCCTAATTATGGATGTT+GGG + chr2_4:16199488-16199507 None:intergenic 25.0%
! ATTCGAACAAATCCTAATTA+TGG + chr2_4:16199496-16199515 None:intergenic 25.0%
AAGAAGAAGTTACAGAGAAA+TGG + chr2_4:16194637-16194656 None:intergenic 30.0%
!!! GTTTTGATTTTGGTTGTTGA+TGG + chr2_4:16194721-16194740 None:intergenic 30.0%
!!! TCTGAGAATGGTTTTGATTT+TGG + chr2_4:16194731-16194750 None:intergenic 30.0%
ATTATCGATAAGGTAGTTGA+AGG + chr2_4:16194937-16194956 None:intergenic 30.0%
TTCAACTACCTTATCGATAA+TGG - chr2_4:16194936-16194955 Msa0317970:three_prime_UTR 30.0%
TACTGTAACCATTATCGATA+AGG + chr2_4:16194947-16194966 None:intergenic 30.0%
!! AACAAAAGTGTTAGATCGAA+GGG + chr2_4:16194981-16195000 None:intergenic 30.0%
TCAATTGATCATATCACTTG+TGG - chr2_4:16195025-16195044 Msa0317970:three_prime_UTR 30.0%
CCAACAATTACGAAAAACTA+GGG + chr2_4:16195073-16195092 None:intergenic 30.0%
ACCAACAATTACGAAAAACT+AGG + chr2_4:16195074-16195093 None:intergenic 30.0%
TACAGTGATTAAGTGATCTA+GGG + chr2_4:16195104-16195123 None:intergenic 30.0%
ATACAGTGATTAAGTGATCT+AGG + chr2_4:16195105-16195124 None:intergenic 30.0%
! AATATATTTGCTTGGATTGG+TGG - chr2_4:16195142-16195161 Msa0317970:CDS 30.0%
TACATTTCACCTAAACAACT+AGG + chr2_4:16195263-16195282 None:intergenic 30.0%
!!! TTGGGTTTTTTATTCGTTTG+CGG - chr2_4:16195396-16195415 Msa0317970:intron 30.0%
! TGATTTTATGCAAAATGGGA+AGG - chr2_4:16195460-16195479 Msa0317970:intron 30.0%
! GATTTTATGCAAAATGGGAA+GGG - chr2_4:16195461-16195480 Msa0317970:intron 30.0%
! ATTTTATGCAAAATGGGAAG+GGG - chr2_4:16195462-16195481 Msa0317970:intron 30.0%
GTATAATCCATGATCTTTGT+TGG + chr2_4:16195619-16195638 None:intergenic 30.0%
!! TACAAAGAATCCTATTTTGG+TGG + chr2_4:16195677-16195696 None:intergenic 30.0%
AGTAAACAAGCGAAACAATA+TGG - chr2_4:16195878-16195897 Msa0317970:intron 30.0%
GTAAACAAGCGAAACAATAT+GGG - chr2_4:16195879-16195898 Msa0317970:intron 30.0%
! ACCTCTAAAAACATAAATGC+CGG + chr2_4:16195929-16195948 None:intergenic 30.0%
!!! GGAAGAAATGTCTGATTTTT+TGG - chr2_4:16196024-16196043 Msa0317970:intron 30.0%
! GATTTTGTGTCAAAATATGG+TGG - chr2_4:16196126-16196145 Msa0317970:intron 30.0%
!! AACTTTCTGCTCTAAACTTT+TGG - chr2_4:16196202-16196221 Msa0317970:intron 30.0%
! CATGATGGAGAATATTGAAA+AGG - chr2_4:16196393-16196412 Msa0317970:intron 30.0%
ACAACTCATGAAATACATGA+AGG - chr2_4:16196842-16196861 Msa0317970:intron 30.0%
! TTTTTCCAGCAATAATGTCT+AGG - chr2_4:16196866-16196885 Msa0317970:intron 30.0%
GAAATAAAGTTGTGCAACAA+CGG + chr2_4:16197038-16197057 None:intergenic 30.0%
CTTTCATGTAAAGTTTCCTT+TGG - chr2_4:16197324-16197343 Msa0317970:intron 30.0%
ATATCGACACATAAACCATA+GGG + chr2_4:16197369-16197388 None:intergenic 30.0%
CAAATAAATCATCCAAGAAC+CGG + chr2_4:16197522-16197541 None:intergenic 30.0%
GTGATGTATGTGATATGTAT+TGG - chr2_4:16197593-16197612 Msa0317970:intron 30.0%
TATCGCTTGATTCAAATCAA+TGG - chr2_4:16197815-16197834 Msa0317970:intron 30.0%
ACATAAACTACATACTAACC+TGG + chr2_4:16197995-16198014 None:intergenic 30.0%
AAGAAAGGGAAAGAGAAAAA+TGG + chr2_4:16198388-16198407 None:intergenic 30.0%
AAAAGAGAGACTTATCATAG+TGG + chr2_4:16198415-16198434 None:intergenic 30.0%
CTTTATCATCACTCCAAAAA+AGG + chr2_4:16198619-16198638 None:intergenic 30.0%
!!! CTTTTTTGGAGTGATGATAA+AGG - chr2_4:16198617-16198636 Msa0317970:intron 30.0%
AATCTTCTTTACAGTCTACA+TGG - chr2_4:16198739-16198758 Msa0317970:intron 30.0%
!! TTCCTGTATAGCTTTGATTA+TGG - chr2_4:16198883-16198902 Msa0317970:intron 30.0%
CAAGGTTGGAAAAACAATAA+AGG + chr2_4:16199098-16199117 None:intergenic 30.0%
!!! TGTCACTTTGTTCTACTTTT+AGG - chr2_4:16199190-16199209 Msa0317970:CDS 30.0%
! AGGTGCTTTTGAATACAAAT+TGG - chr2_4:16199210-16199229 Msa0317970:CDS 30.0%
! GGTGCTTTTGAATACAAATT+GGG - chr2_4:16199211-16199230 Msa0317970:CDS 30.0%
TAGATATTGAACATTGCTTG+CGG - chr2_4:16199419-16199438 Msa0317970:intron 30.0%
CAGTCTGATTCAGAAAAATT+GGG + chr2_4:16199452-16199471 None:intergenic 30.0%
ACAGTCTGATTCAGAAAAAT+TGG + chr2_4:16199453-16199472 None:intergenic 30.0%
CAAATCCTAATTATGGATGT+TGG + chr2_4:16199489-16199508 None:intergenic 30.0%
TTGAAGTAGAGATCTGAGAA+TGG + chr2_4:16194743-16194762 None:intergenic 35.0%
TTCTCAGATCTCTACTTCAA+TGG - chr2_4:16194743-16194762 Msa0317970:three_prime_UTR 35.0%
GTTGAAGTTACCACTGAATT+CGG + chr2_4:16194841-16194860 None:intergenic 35.0%
!! GTGAACTTGTTATTGGTAGA+AGG + chr2_4:16194894-16194913 None:intergenic 35.0%
!! CAACAAAAGTGTTAGATCGA+AGG + chr2_4:16194982-16195001 None:intergenic 35.0%
!! CCCTAGTTTTTCGTAATTGT+TGG - chr2_4:16195070-16195089 Msa0317970:CDS 35.0%
!!! TGGGTTTTTTATTCGTTTGC+GGG - chr2_4:16195397-16195416 Msa0317970:intron 35.0%
AAACGTTCCAACAAAGATCA+TGG - chr2_4:16195609-16195628 Msa0317970:intron 35.0%
! ACTTTTACTCTTAATGGCTG+AGG - chr2_4:16195698-16195717 Msa0317970:intron 35.0%
! CTTTTACTCTTAATGGCTGA+GGG - chr2_4:16195699-16195718 Msa0317970:intron 35.0%
AATCTTAAAACCCCGCAATT+TGG + chr2_4:16195737-16195756 None:intergenic 35.0%
!!! CGGGGTTTTAAGATTCATAT+CGG - chr2_4:16195742-16195761 Msa0317970:intron 35.0%
!!! GGGGTTTTAAGATTCATATC+GGG - chr2_4:16195743-16195762 Msa0317970:intron 35.0%
!! TATCGGGATTTTAACAACCA+TGG - chr2_4:16195759-16195778 Msa0317970:intron 35.0%
TAACTATGAGTCTATGACCA+TGG + chr2_4:16195779-16195798 None:intergenic 35.0%
! TTTGAGATTGGGAAAAGAGA+GGG - chr2_4:16195820-16195839 Msa0317970:intron 35.0%
!!! TCCGGCATTTATGTTTTTAG+AGG - chr2_4:16195925-16195944 Msa0317970:intron 35.0%
! GTCAAAATATGGTGGTGAAA+AGG - chr2_4:16196134-16196153 Msa0317970:CDS 35.0%
AACTCCTTGTTAAGGCTATT+GGG + chr2_4:16196174-16196193 None:intergenic 35.0%
AAACTCCTTGTTAAGGCTAT+TGG + chr2_4:16196175-16196194 None:intergenic 35.0%
! AATAGCCTTAACAAGGAGTT+TGG - chr2_4:16196174-16196193 Msa0317970:CDS 35.0%
! ATAGCCTTAACAAGGAGTTT+GGG - chr2_4:16196175-16196194 Msa0317970:intron 35.0%
TGCATATGTTCCTTCAACTT+TGG + chr2_4:16196298-16196317 None:intergenic 35.0%
!! TGAAGTTAAAGGTGTCATGA+TGG - chr2_4:16196378-16196397 Msa0317970:intron 35.0%
GTGATGCAATGATTAACACT+TGG + chr2_4:16196523-16196542 None:intergenic 35.0%
! TCAAATGTTTTATGTAGGCG+TGG - chr2_4:16196767-16196786 Msa0317970:intron 35.0%
AGTATCACATCATGAACCAA+AGG + chr2_4:16197343-16197362 None:intergenic 35.0%
CATATCGACACATAAACCAT+AGG + chr2_4:16197370-16197389 None:intergenic 35.0%
AATCAGTTGAAGAGTCCATT+GGG - chr2_4:16197485-16197504 Msa0317970:intron 35.0%
CGGTTCTTGGATGATTTATT+TGG - chr2_4:16197520-16197539 Msa0317970:intron 35.0%
! AAATCTAAGGCTGATTAGTG+AGG + chr2_4:16197733-16197752 None:intergenic 35.0%
TAATGAATGAAATGAACCCC+CGG - chr2_4:16197764-16197783 Msa0317970:CDS 35.0%
!! TTAATGTAGGTTCTAGACAG+AGG - chr2_4:16197924-16197943 Msa0317970:intron 35.0%
!!! GCGTCTTTGTTATTTTGAAG+TGG - chr2_4:16198111-16198130 Msa0317970:intron 35.0%
TTAAAAACAAGTGGGAGAAG+TGG + chr2_4:16198234-16198253 None:intergenic 35.0%
ATCATAGTGGTAGCAAGAAA+GGG + chr2_4:16198402-16198421 None:intergenic 35.0%
TATCATAGTGGTAGCAAGAA+AGG + chr2_4:16198403-16198422 None:intergenic 35.0%
! CTTCAACGTTTTCTTCAATC+TGG - chr2_4:16198511-16198530 Msa0317970:intron 35.0%
! AGGAACACCTTTTTCTTTCT+TGG - chr2_4:16198554-16198573 Msa0317970:intron 35.0%
! GGAACACCTTTTTCTTTCTT+GGG - chr2_4:16198555-16198574 Msa0317970:intron 35.0%
! GAACACCTTTTTCTTTCTTG+GGG - chr2_4:16198556-16198575 Msa0317970:intron 35.0%
ACTCCAAAAAAGGAAACGAA+GGG + chr2_4:16198609-16198628 None:intergenic 35.0%
AAAGGCTGTATGTTATGTAC+CGG - chr2_4:16198635-16198654 Msa0317970:intron 35.0%
TTAAATTATCCGCATGACAC+CGG + chr2_4:16198657-16198676 None:intergenic 35.0%
CATGCGGATAATTTAACACA+TGG - chr2_4:16198661-16198680 Msa0317970:intron 35.0%
ATGGAAGATCTTACAAGACT+CGG + chr2_4:16198792-16198811 None:intergenic 35.0%
CTCCATAATCAAAGCTATAC+AGG + chr2_4:16198888-16198907 None:intergenic 35.0%
AAGGTAAAGCTGATTGTGTT+GGG - chr2_4:16199001-16199020 Msa0317970:intron 35.0%
TCACAGAAAGGACTATTATG+AGG + chr2_4:16199045-16199064 None:intergenic 35.0%
TAATAGTCCTTTCTGTGACT+CGG - chr2_4:16199047-16199066 Msa0317970:intron 35.0%
ATAATAAGCACCATTCTCTG+TGG - chr2_4:16199072-16199091 Msa0317970:intron 35.0%
TCTTACCTTGGATAATCACA+AGG + chr2_4:16199116-16199135 None:intergenic 35.0%
ATGTAGTGTACAAAAAGCCA+CGG + chr2_4:16199381-16199400 None:intergenic 35.0%
GAGAAATGGATGAGAGAGAA+GGG + chr2_4:16194623-16194642 None:intergenic 40.0%
AGAGAAATGGATGAGAGAGA+AGG + chr2_4:16194624-16194643 None:intergenic 40.0%
AGATCAGTTGCTTCTGATTC+TGG + chr2_4:16194776-16194795 None:intergenic 40.0%
ATCTACGCTTTCGTATCAAG+AGG - chr2_4:16194792-16194811 Msa0317970:three_prime_UTR 40.0%
TGTAAGCTGAAAATCTGACC+AGG - chr2_4:16195301-16195320 Msa0317970:intron 40.0%
!! TCTACTTGGTGCTAGGTTAT+AGG - chr2_4:16195357-16195376 Msa0317970:intron 40.0%
!!! GTTTTTTATTCGTTTGCGGG+AGG - chr2_4:16195400-16195419 Msa0317970:intron 40.0%
CAAGCATAATCGCCAAATTG+CGG - chr2_4:16195722-16195741 Msa0317970:intron 40.0%
AAGCATAATCGCCAAATTGC+GGG - chr2_4:16195723-16195742 Msa0317970:intron 40.0%
!! CTTTGAGATTGGGAAAAGAG+AGG - chr2_4:16195819-16195838 Msa0317970:intron 40.0%
! TTTTGTTCACTGGCATCACA+TGG - chr2_4:16196003-16196022 Msa0317970:intron 40.0%
GTTGTTGCAGATGAATCAAC+TGG - chr2_4:16196063-16196082 Msa0317970:intron 40.0%
AGATGAATCAACTGGAAGAC+AGG - chr2_4:16196071-16196090 Msa0317970:intron 40.0%
AGTACCCAAACTCCTTGTTA+AGG + chr2_4:16196182-16196201 None:intergenic 40.0%
!! GCTCAAGTCTCTGAAGTTAA+AGG - chr2_4:16196367-16196386 Msa0317970:intron 40.0%
TCCAGCAATAATGTCTAGGT+TGG - chr2_4:16196870-16196889 Msa0317970:intron 40.0%
CCAGCAATAATGTCTAGGTT+GGG - chr2_4:16196871-16196890 Msa0317970:intron 40.0%
! GATCCACTTACTCTAAGAGT+GGG - chr2_4:16196893-16196912 Msa0317970:intron 40.0%
AAGAATTGACTACAGGACAC+TGG + chr2_4:16197221-16197240 None:intergenic 40.0%
CAATCAGTTGAAGAGTCCAT+TGG - chr2_4:16197484-16197503 Msa0317970:intron 40.0%
TGACTTTCGATCATGCATTC+CGG + chr2_4:16197786-16197805 None:intergenic 40.0%
CTAAATCTTCTCAAATCGCG+TGG - chr2_4:16197842-16197861 Msa0317970:intron 40.0%
AGGAGAAAAGATAGAGCTTC+TGG - chr2_4:16197944-16197963 Msa0317970:CDS 40.0%
AGAAAAGATAGAGCTTCTGG+TGG - chr2_4:16197947-16197966 Msa0317970:CDS 40.0%
! ACATACTAACCTGGTGATGA+AGG + chr2_4:16197986-16198005 None:intergenic 40.0%
GGCAACATACTATAGAGAAC+AGG + chr2_4:16198025-16198044 None:intergenic 40.0%
GAACTTCAATCCGTCAATAC+AGG + chr2_4:16198052-16198071 None:intergenic 40.0%
TTGAAGTGGATGCTAAGTTG+TGG - chr2_4:16198125-16198144 Msa0317970:intron 40.0%
TGAAGTGGATGCTAAGTTGT+GGG - chr2_4:16198126-16198145 Msa0317970:intron 40.0%
AAGTCCTGAAACTCATGTTC+AGG - chr2_4:16198458-16198477 Msa0317970:intron 40.0%
AGTCCTGAAACTCATGTTCA+GGG - chr2_4:16198459-16198478 Msa0317970:intron 40.0%
! CAACGTTTTCTTCAATCTGG+TGG - chr2_4:16198514-16198533 Msa0317970:intron 40.0%
CTCTTCCCCAAGAAAGAAAA+AGG + chr2_4:16198564-16198583 None:intergenic 40.0%
! CTTTTTCTTTCTTGGGGAAG+AGG - chr2_4:16198562-16198581 Msa0317970:intron 40.0%
TCCAAAAAAGGAAACGAAGG+GGG + chr2_4:16198607-16198626 None:intergenic 40.0%
CTCCAAAAAAGGAAACGAAG+GGG + chr2_4:16198608-16198627 None:intergenic 40.0%
CACTCCAAAAAAGGAAACGA+AGG + chr2_4:16198610-16198629 None:intergenic 40.0%
!! TTTGCAGCCACATTTTTCGA+CGG + chr2_4:16198976-16198995 None:intergenic 40.0%
AATGTGGCTGCAAAACATGA+AGG - chr2_4:16198982-16199001 Msa0317970:intron 40.0%
GAAGGTAAAGCTGATTGTGT+TGG - chr2_4:16199000-16199019 Msa0317970:intron 40.0%
AATAGTCCTTTCTGTGACTC+GGG - chr2_4:16199048-16199067 Msa0317970:intron 40.0%
ACAATAAAGGCCACAGAGAA+TGG + chr2_4:16199085-16199104 None:intergenic 40.0%
TCCAACCTTGTGATTATCCA+AGG - chr2_4:16199108-16199127 Msa0317970:intron 40.0%
ACCTTGGATAATCACAAGGT+TGG + chr2_4:16199112-16199131 None:intergenic 40.0%
! CATGCATTGACATCTTACCT+TGG + chr2_4:16199128-16199147 None:intergenic 40.0%
CAAGGTAAGATGTCAATGCA+TGG - chr2_4:16199126-16199145 Msa0317970:intron 40.0%
GAACAAAGTGACAACTTCTC+CGG + chr2_4:16199183-16199202 None:intergenic 40.0%
! TGGGTTGTCTGTTTGAAGTT+TGG - chr2_4:16199230-16199249 Msa0317970:CDS 40.0%
!! TTGAATGTTGATTTGAGCCG+TGG - chr2_4:16199361-16199380 Msa0317970:exon 40.0%
TCCTAATTATGGATGTTGGG+AGG + chr2_4:16199485-16199504 None:intergenic 40.0%
AGAGAGAGAGAGAGAGAGAA+AGG + chr2_4:16194665-16194684 None:intergenic 45.0%
! TGAATTCGGTGAATTCAGCG+AGG + chr2_4:16194827-16194846 None:intergenic 45.0%
GCTGAATTCACCGAATTCAG+TGG - chr2_4:16194828-16194847 Msa0317970:three_prime_UTR 45.0%
CTGAAGACACTGAAAAGCGA+TGG + chr2_4:16194865-16194884 None:intergenic 45.0%
GAGCAATGCGATGATCTACT+TGG - chr2_4:16195343-16195362 Msa0317970:intron 45.0%
!!! CCTATTTTGGTGGAATCGAG+TGG + chr2_4:16195667-16195686 None:intergenic 45.0%
CCACTCGATTCCACCAAAAT+AGG - chr2_4:16195664-16195683 Msa0317970:intron 45.0%
AGCATAATCGCCAAATTGCG+GGG - chr2_4:16195724-16195743 Msa0317970:intron 45.0%
!!! ATGCTGCTGCTTTTGTTCAC+TGG - chr2_4:16195993-16196012 Msa0317970:intron 45.0%
AACTGGAAGACAGGTTCCTA+TGG - chr2_4:16196080-16196099 Msa0317970:intron 45.0%
!! ATCCTTGACACGCTCTAGAA+AGG + chr2_4:16196106-16196125 None:intergenic 45.0%
! TCCTCCCAATAGCCTTAACA+AGG - chr2_4:16196167-16196186 Msa0317970:CDS 45.0%
TCCTTGTTAAGGCTATTGGG+AGG + chr2_4:16196171-16196190 None:intergenic 45.0%
ATGTGTTAACCTCTCTGCAC+AGG - chr2_4:16196272-16196291 Msa0317970:intron 45.0%
TTTATGTAGGCGTGGCACAA+TGG - chr2_4:16196775-16196794 Msa0317970:intron 45.0%
CCCAACCTAGACATTATTGC+TGG + chr2_4:16196874-16196893 None:intergenic 45.0%
! GGATCCACTTACTCTAAGAG+TGG - chr2_4:16196892-16196911 Msa0317970:intron 45.0%
AGACCCACTCTTAGAGTAAG+TGG + chr2_4:16196899-16196918 None:intergenic 45.0%
TGATGTGATACTGAGCCCTA+TGG - chr2_4:16197351-16197370 Msa0317970:intron 45.0%
AATCATCCAAGAACCGGACA+GGG + chr2_4:16197516-16197535 None:intergenic 45.0%
AAATCATCCAAGAACCGGAC+AGG + chr2_4:16197517-16197536 None:intergenic 45.0%
TGTACACCCATTCAACACCT+TGG - chr2_4:16197554-16197573 Msa0317970:intron 45.0%
GTACACCCATTCAACACCTT+GGG - chr2_4:16197555-16197574 Msa0317970:intron 45.0%
!! TCTCTCCCAAGGTGTTGAAT+GGG + chr2_4:16197563-16197582 None:intergenic 45.0%
ACTTTCGATCATGCATTCCG+GGG + chr2_4:16197784-16197803 None:intergenic 45.0%
GACTTTCGATCATGCATTCC+GGG + chr2_4:16197785-16197804 None:intergenic 45.0%
GACTGATAACCTTCATCACC+AGG - chr2_4:16197974-16197993 Msa0317970:CDS 45.0%
CAATCCGTCAATACAGGCTA+CGG + chr2_4:16198046-16198065 None:intergenic 45.0%
GAGAAGTGGATGTCTGTAGT+GGG + chr2_4:16198220-16198239 None:intergenic 45.0%
GTCCTGAAACTCATGTTCAG+GGG - chr2_4:16198460-16198479 Msa0317970:intron 45.0%
TGGCAGTGTTCTCTAACTCA+AGG - chr2_4:16198534-16198553 Msa0317970:intron 45.0%
AAAAGGAAACGAAGGGGGTT+GGG + chr2_4:16198602-16198621 None:intergenic 45.0%
AAAAAGGAAACGAAGGGGGT+TGG + chr2_4:16198603-16198622 None:intergenic 45.0%
!!! ACCCCCTTCGTTTCCTTTTT+TGG - chr2_4:16198603-16198622 Msa0317970:intron 45.0%
!! TGTTATGTACCGGTGTCATG+CGG - chr2_4:16198645-16198664 Msa0317970:intron 45.0%
AAGTGGAGAGAGAAGGGAAT+GGG + chr2_4:16198816-16198835 None:intergenic 45.0%
TCTTTCAGGCACAAGACTTC+AGG - chr2_4:16198933-16198952 Msa0317970:intron 45.0%
!!! CCACATTTTTCGACGGATTG+AGG + chr2_4:16198969-16198988 None:intergenic 45.0%
CCTCAATCCGTCGAAAAATG+TGG - chr2_4:16198966-16198985 Msa0317970:intron 45.0%
ATAGTCCTTTCTGTGACTCG+GGG - chr2_4:16199049-16199068 Msa0317970:intron 45.0%
ATTATCCCCGAGTCACAGAA+AGG + chr2_4:16199057-16199076 None:intergenic 45.0%
GCCTCCCAACATCCATAATT+AGG - chr2_4:16199481-16199500 Msa0317970:five_prime_UTR 45.0%
!!! TATATTTTATATTGTTATTT+TGG - chr2_4:16196246-16196265 Msa0317970:intron 5.0%
!!! TTATAAAATTTTAAAAATCA+TGG + chr2_4:16197006-16197025 None:intergenic 5.0%
!!! GATTTTTAAAATTTTATAAT+TGG - chr2_4:16197007-16197026 Msa0317970:intron 5.0%
!! TATAAAATAAAATAAAAAAC+AGG + chr2_4:16198319-16198338 None:intergenic 5.0%
!!! TTTTATAAAAATTAAATTGA+TGG - chr2_4:16198332-16198351 Msa0317970:intron 5.0%
!! TTTATAAAAATTAAATTGAT+GGG - chr2_4:16198333-16198352 Msa0317970:intron 5.0%
!! GCGATGATCTACTTGGTGCT+AGG - chr2_4:16195350-16195369 Msa0317970:intron 50.0%
AGCGTGCGTAGGTAATCTTC+CGG - chr2_4:16195907-16195926 Msa0317970:intron 50.0%
!! ACACGCTCTAGAAAGGCCAT+AGG + chr2_4:16196099-16196118 None:intergenic 50.0%
TCTGCACAGGCCAAAGTTGA+AGG - chr2_4:16196285-16196304 Msa0317970:intron 50.0%
! CTGTGTTGATCATCCTGACG+AGG - chr2_4:16196321-16196340 Msa0317970:intron 50.0%
CGAGGTAAGCAAGCTTGCAA+AGG - chr2_4:16196339-16196358 Msa0317970:intron 50.0%
!! CTCTCTCCCAAGGTGTTGAA+TGG + chr2_4:16197564-16197583 None:intergenic 50.0%
TCAACACCTTGGGAGAGAGA+AGG - chr2_4:16197565-16197584 Msa0317970:intron 50.0%
CAACACCTTGGGAGAGAGAA+GGG - chr2_4:16197566-16197585 Msa0317970:intron 50.0%
CATTACCCTTCTCTCTCCCA+AGG + chr2_4:16197574-16197593 None:intergenic 50.0%
CTTTCGATCATGCATTCCGG+GGG + chr2_4:16197783-16197802 None:intergenic 50.0%
GTTGCCGTAGCCTGTATTGA+CGG - chr2_4:16198039-16198058 Msa0317970:CDS 50.0%
GGAGAAGTGGATGTCTGTAG+TGG + chr2_4:16198221-16198240 None:intergenic 50.0%
GTTTCAGGACTTCTGCAGAC+AGG + chr2_4:16198450-16198469 None:intergenic 50.0%
TGCCCCTGAACATGAGTTTC+AGG + chr2_4:16198465-16198484 None:intergenic 50.0%
AAACTCATGTTCAGGGGCAG+CGG - chr2_4:16198466-16198485 Msa0317970:intron 50.0%
AAAGGAAACGAAGGGGGTTG+GGG + chr2_4:16198601-16198620 None:intergenic 50.0%
GAGAGAGAAGGGAATGGGAA+TGG + chr2_4:16198811-16198830 None:intergenic 50.0%
CAAGTGGAGAGAGAAGGGAA+TGG + chr2_4:16198817-16198836 None:intergenic 50.0%
GCTGTCAAGTGGAGAGAGAA+GGG + chr2_4:16198822-16198841 None:intergenic 50.0%
TGCTGTCAAGTGGAGAGAGA+AGG + chr2_4:16198823-16198842 None:intergenic 50.0%
GCACAAGACTTCAGGAGTTC+TGG - chr2_4:16198941-16198960 Msa0317970:intron 50.0%
TATGGGCAAACAGCGTGCGT+AGG - chr2_4:16195896-16195915 Msa0317970:intron 55.0%
!! GGCCTTTCTAGAGCGTGTCA+AGG - chr2_4:16196101-16196120 Msa0317970:intron 55.0%
CAACTTTGGCCTGTGCAGAG+AGG + chr2_4:16196284-16196303 None:intergenic 55.0%
! GCAAGCTTGCTTACCTCGTC+AGG + chr2_4:16196337-16196356 None:intergenic 55.0%
AGGGGGTTGGGGATTTAAGG+AGG + chr2_4:16198590-16198609 None:intergenic 55.0%
CGAAGGGGGTTGGGGATTTA+AGG + chr2_4:16198593-16198612 None:intergenic 55.0%
CCATTGGGCACGACCCTGTC+CGG - chr2_4:16197500-16197519 Msa0317970:intron 65.0%
GCACGACCCTGTCCGGTTCT+TGG - chr2_4:16197507-16197526 Msa0317970:intron 65.0%
CATGTTCAGGGGCAGCGGCA+AGG - chr2_4:16198471-16198490 Msa0317970:intron 65.0%
CCGGACAGGGTCGTGCCCAA+TGG + chr2_4:16197503-16197522 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 16194606 16199520 16194606 ID=Msa0317970;Name=Msa0317970
chr2_4 mRNA 16194606 16199520 16194606 ID=Msa0317970-mRNA-1;Parent=Msa0317970;Name=Msa0317970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=136|1|1|1|0.6|0.66|6|445|220
chr2_4 exon 16194606 16195185 16194606 ID=Msa0317970-mRNA-1:exon:6072;Parent=Msa0317970-mRNA-1
chr2_4 exon 16196131 16196193 16196131 ID=Msa0317970-mRNA-1:exon:6071;Parent=Msa0317970-mRNA-1
chr2_4 exon 16197712 16197832 16197712 ID=Msa0317970-mRNA-1:exon:6070;Parent=Msa0317970-mRNA-1
chr2_4 exon 16197930 16198071 16197930 ID=Msa0317970-mRNA-1:exon:6069;Parent=Msa0317970-mRNA-1
chr2_4 exon 16199163 16199431 16199163 ID=Msa0317970-mRNA-1:exon:6068;Parent=Msa0317970-mRNA-1
chr2_4 exon 16199452 16199520 16199452 ID=Msa0317970-mRNA-1:exon:6067;Parent=Msa0317970-mRNA-1
chr2_4 five_prime_UTR 16199452 16199520 16199452 ID=Msa0317970-mRNA-1:five_prime_utr;Parent=Msa0317970-mRNA-1
chr2_4 five_prime_UTR 16199365 16199431 16199365 ID=Msa0317970-mRNA-1:five_prime_utr;Parent=Msa0317970-mRNA-1
chr2_4 CDS 16199163 16199364 16199163 ID=Msa0317970-mRNA-1:cds;Parent=Msa0317970-mRNA-1
chr2_4 CDS 16197930 16198071 16197930 ID=Msa0317970-mRNA-1:cds;Parent=Msa0317970-mRNA-1
chr2_4 CDS 16197712 16197832 16197712 ID=Msa0317970-mRNA-1:cds;Parent=Msa0317970-mRNA-1
chr2_4 CDS 16196131 16196193 16196131 ID=Msa0317970-mRNA-1:cds;Parent=Msa0317970-mRNA-1
chr2_4 CDS 16195051 16195185 16195051 ID=Msa0317970-mRNA-1:cds;Parent=Msa0317970-mRNA-1
chr2_4 three_prime_UTR 16194606 16195050 16194606 ID=Msa0317970-mRNA-1:three_prime_utr;Parent=Msa0317970-mRNA-1
Gene Sequence

>Msa0317970

ATGGCGAACAACCAGAATCAGAAGCAACTGATCTACGCTTTCGTATCAAGAGGAACAGTTATCCTCGCTGAATTCACCGAATTCAGTGGTAACTTCAACACCATCGCTTTTCAGTGTCTTCAGAAACTTCCTTCTACCAATAACAAGTTCACATATAACTGTGATAATCACACCTTCAACTACCTTATCGATAATGGTTACACTTATTGTGTTGTTGCAGATGAATCAACTGGAAGACAGGTTCCTATGGCCTTTCTAGAGCGTGTCAAGGATGATTTTGTGTCAAAATATGGTGGTGAAAAGGCTTCTACAGCTCCTCCCAATAGCCTTAACAAGGAGTTTGGGCCAAAGTTGAAGGAACATATGCAGTACTGTGTTGATCATCCTGACGAGGTAAGCAAGCTTGCAAAGGTGAAAGCTCAAGTCTCTGAAGTTAAAGGTGTCATGATGGAGAATATTGAAAAGGTTCTAGACAGAGGAGAAAAGATAGAGCTTCTGGTGGACAAGACTGATAACCTTCATCACCAGGCACAAGACTTCAGGAGTTCTGGAACCTCAATCCGTCGAAAAATGTGGCTGCAAAACATGAAGGTAAAGCTGATTGTGTTGGGAATTTTGATAGCACTGATCCTCATAATAGTCCTTTCTGTGACTCGGGGATAA

Protein sequence

>Msa0317970

MANNQNQKQLIYAFVSRGTVILAEFTEFSGNFNTIAFQCLQKLPSTNNKFTYNCDNHTFNYLIDNGYTYCVVADESTGRQVPMAFLERVKDDFVSKYGGEKASTAPPNSLNKEFGPKLKEHMQYCVDHPDEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTDNLHHQAQDFRSSGTSIRRKMWLQNMKVKLIVLGILIALILIIVLSVTRG*