Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1125460 | Msa1386240 | 0.912851 | 1.212743e-83 | -8.615850e-47 |
| Msa1125540 | Msa1386240 | 0.900084 | 1.043735e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 190 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTGGTGGGTTTGTTAT+TGG | 0.135780 | tig0020787:+118896 | None:intergenic |
| CTGAATTGCAAAACGGAAAA+TGG | 0.175870 | tig0020787:+118502 | None:intergenic |
| TGATGTTACCTGTGAGATTT+TGG | 0.217449 | tig0020787:-118084 | Msa1386240:five_prime_UTR |
| AGGGTTTGTGGGGTGAGGGG+TGG | 0.234800 | tig0020787:+118764 | None:intergenic |
| TGCCATGACTTATAAAATTC+TGG | 0.240095 | tig0020787:-117661 | Msa1386240:five_prime_UTR |
| CTTTGATTAAAGGGTTGTTT+AGG | 0.242123 | tig0020787:-118172 | Msa1386240:five_prime_UTR |
| TGAGGGGTGGGGTGAGGTGG+TGG | 0.253597 | tig0020787:+118777 | None:intergenic |
| GGGTTAGGGTTTGTGGGGTG+AGG | 0.263655 | tig0020787:+118759 | None:intergenic |
| CTTGGTTGTCAAACTTTGTT+TGG | 0.266551 | tig0020787:-117447 | Msa1386240:five_prime_UTR |
| AGAAGGGTGGTGGTGGAGTT+TGG | 0.266647 | tig0020787:+118724 | None:intergenic |
| GTGGGGTGAGGGGTGGGGTG+AGG | 0.267270 | tig0020787:+118771 | None:intergenic |
| AGGCTCCTTATCCTTCATTT+AGG | 0.276315 | tig0020787:+114334 | None:intergenic |
| GGGTGAGGGGTGGGGTGAGG+TGG | 0.277320 | tig0020787:+118774 | None:intergenic |
| AGGAAGTGGGTTAGGGTTTG+TGG | 0.287613 | tig0020787:+118752 | None:intergenic |
| GGGTTGAGGATTGGTGGTGG+TGG | 0.289536 | tig0020787:+118884 | None:intergenic |
| GGGTTTGTGGGGTGAGGGGT+GGG | 0.294215 | tig0020787:+118765 | None:intergenic |
| TGAGGTGGTGGTTGAGGAAA+TGG | 0.302288 | tig0020787:+118789 | None:intergenic |
| TCGACTTCCATCTCTTCTCT+TGG | 0.302493 | tig0020787:-118691 | Msa1386240:five_prime_UTR |
| TGGATTTGAGGAAGTGGGTT+AGG | 0.308574 | tig0020787:+118744 | None:intergenic |
| GGTTTGTGGGGTGAGGGGTG+GGG | 0.309536 | tig0020787:+118766 | None:intergenic |
| GTGGGGTGAGGTGGTGGTTG+AGG | 0.310147 | tig0020787:+118783 | None:intergenic |
| TTTGATTAAAGGGTTGTTTA+GGG | 0.314956 | tig0020787:-118171 | Msa1386240:five_prime_UTR |
| GTGATTGTTGGTGGTGGTGG+TGG | 0.315530 | tig0020787:+118863 | None:intergenic |
| TCTTGTATTGTGATGATTGA+TGG | 0.325090 | tig0020787:-117867 | Msa1386240:five_prime_UTR |
| GTTTGATGAAATGAGGAAAA+TGG | 0.326983 | tig0020787:-118225 | Msa1386240:five_prime_UTR |
| ACTTATAAAATTCTGGTTGC+TGG | 0.327645 | tig0020787:-117654 | Msa1386240:five_prime_UTR |
| GGTTAGGGTTTGTGGGGTGA+GGG | 0.327737 | tig0020787:+118760 | None:intergenic |
| ATTCATGGGTTTGTTAAATC+TGG | 0.329318 | tig0020787:-118377 | Msa1386240:five_prime_UTR |
| GTTTATGAGATGATTGAATT+GGG | 0.336232 | tig0020787:-118119 | Msa1386240:five_prime_UTR |
| GGTGGTGGGTTGAGGATTGG+TGG | 0.344340 | tig0020787:+118878 | None:intergenic |
| GGTTTATGAGATGATTGAAT+TGG | 0.347943 | tig0020787:-118120 | Msa1386240:five_prime_UTR |
| CGGAAAATGGGTTCGGTTTG+TGG | 0.354992 | tig0020787:+118515 | None:intergenic |
| GTTAGGGTTTGTGGGGTGAG+GGG | 0.360952 | tig0020787:+118761 | None:intergenic |
| TGCTTCATATAATAAGTTGA+TGG | 0.366068 | tig0020787:-117553 | Msa1386240:five_prime_UTR |
| ACAAAATAATCATACCCTTT+AGG | 0.370573 | tig0020787:+117984 | None:intergenic |
| GATTGAAGAGGCAATGAGAT+TGG | 0.370990 | tig0020787:-117826 | Msa1386240:five_prime_UTR |
| GGATTTGAGGAAGTGGGTTA+GGG | 0.375479 | tig0020787:+118745 | None:intergenic |
| CGACTTCCATCTCTTCTCTT+GGG | 0.377757 | tig0020787:-118690 | Msa1386240:five_prime_UTR |
| GGTGGTGGTGGGTTGAGGAT+TGG | 0.378579 | tig0020787:+118875 | None:intergenic |
| GGTTGAGGATTGGTGGTGGT+GGG | 0.379221 | tig0020787:+118885 | None:intergenic |
| TTGAGAGCATTGGCAGGGGT+TGG | 0.379413 | tig0020787:+118553 | None:intergenic |
| GTAAATGAAATGCTTGATAA+GGG | 0.383726 | tig0020787:-117591 | Msa1386240:five_prime_UTR |
| GGAAGTGGGTTAGGGTTTGT+GGG | 0.389433 | tig0020787:+118753 | None:intergenic |
| TCTTGATTAGTGGTTATTGT+AGG | 0.393307 | tig0020787:-118277 | Msa1386240:five_prime_UTR |
| TTTGATGAAATGAGGAAAAT+GGG | 0.394625 | tig0020787:-118224 | Msa1386240:five_prime_UTR |
| GAAGTGGGTGTAGTGTTGGG+TGG | 0.396216 | tig0020787:+118814 | None:intergenic |
| ATTGATGGTTTGAGAGGATT+GGG | 0.399046 | tig0020787:-117852 | Msa1386240:five_prime_UTR |
| GGTGGTGGAGTTTGGATTTG+AGG | 0.401538 | tig0020787:+118732 | None:intergenic |
| AATGCTTAAAGAGGAGGGTT+TGG | 0.403436 | tig0020787:-117796 | Msa1386240:five_prime_UTR |
| GGTAAATGAAATGCTTGATA+AGG | 0.403566 | tig0020787:-117592 | Msa1386240:five_prime_UTR |
| GTTATGCGTAGGTTAATTGA+TGG | 0.404197 | tig0020787:-118431 | Msa1386240:five_prime_UTR |
| GTATTAAAAGTAACAACATT+TGG | 0.407276 | tig0020787:+118194 | None:intergenic |
| TGTAGGATTGATGAAGGGAT+TGG | 0.411829 | tig0020787:-118146 | Msa1386240:five_prime_UTR |
| TCTCAACCTATTTGCATCTT+CGG | 0.413513 | tig0020787:+117716 | None:intergenic |
| GTGGGTGTAGTGTTGGGTGG+GGG | 0.419805 | tig0020787:+118817 | None:intergenic |
| TGATGGAAAACCGAGTGTTT+CGG | 0.420401 | tig0020787:-118414 | Msa1386240:five_prime_UTR |
| TATCCTTCATTTAGGAGGGT+TGG | 0.421718 | tig0020787:+114342 | None:intergenic |
| GAAGGACCGAAGATGCAAAT+AGG | 0.425552 | tig0020787:-117722 | Msa1386240:five_prime_UTR |
| GGGTGAAAGAAGGGTGGTGG+TGG | 0.427560 | tig0020787:+118717 | None:intergenic |
| TGATTGTTGGTGGTGGTGGT+GGG | 0.429351 | tig0020787:+118864 | None:intergenic |
| TGGAGGTTATTTATGAGTTG+TGG | 0.433505 | tig0020787:-117917 | Msa1386240:five_prime_UTR |
| CTCCTTATCCTTCATTTAGG+AGG | 0.435154 | tig0020787:+114337 | None:intergenic |
| TGCAAAACGGAAAATGGGTT+CGG | 0.437354 | tig0020787:+118508 | None:intergenic |
| GGAGTTTGGATTTGAGGAAG+TGG | 0.439753 | tig0020787:+118738 | None:intergenic |
| AAGGGTTGTTTAGGGAATGT+AGG | 0.439768 | tig0020787:-118163 | Msa1386240:five_prime_UTR |
| GGTGGGTTGAGGATTGGTGG+TGG | 0.440646 | tig0020787:+118881 | None:intergenic |
| TTGGTTGTCAAACTTTGTTT+GGG | 0.441770 | tig0020787:-117446 | Msa1386240:five_prime_UTR |
| CCGCATCACAAAGATCTTGA+AGG | 0.442050 | tig0020787:+117745 | None:intergenic |
| AGGGAATGTAGGATTGATGA+AGG | 0.442876 | tig0020787:-118152 | Msa1386240:five_prime_UTR |
| GGAAAATGGGTTCGGTTTGT+GGG | 0.443096 | tig0020787:+118516 | None:intergenic |
| CGCTGCTCCTGCCTCCTCAT+CGG | 0.446286 | tig0020787:-116203 | Msa1386240:CDS |
| AAGTGGGTGTAGTGTTGGGT+GGG | 0.446355 | tig0020787:+118815 | None:intergenic |
| CTTGATTAGTGGTTATTGTA+GGG | 0.448286 | tig0020787:-118276 | Msa1386240:five_prime_UTR |
| TCAAGCAGAAGGAGAGTTAG+TGG | 0.449600 | tig0020787:-117613 | Msa1386240:five_prime_UTR |
| TGTGCTTCAATCTCCTCGAC+GGG | 0.450933 | tig0020787:-114446 | Msa1386240:CDS |
| CTTTGTTATACTTGCGCTTG+TGG | 0.451503 | tig0020787:+114419 | None:intergenic |
| GATGTGATTGTTGGTGGTGG+TGG | 0.451570 | tig0020787:+118860 | None:intergenic |
| AGTGGGTGTAGTGTTGGGTG+GGG | 0.455293 | tig0020787:+118816 | None:intergenic |
| GAGGAAGTGGGTGTAGTGTT+GGG | 0.455322 | tig0020787:+118811 | None:intergenic |
| TAGGTGTTGTCGCTTCTGTT+TGG | 0.456053 | tig0020787:+119000 | None:intergenic |
| TTTGTTATACTTGCGCTTGT+GGG | 0.456204 | tig0020787:+114420 | None:intergenic |
| ATTCTGGTTGCTGGGTATAG+AGG | 0.459433 | tig0020787:-117645 | Msa1386240:five_prime_UTR |
| GGAGGAAGTGGGTGTAGTGT+TGG | 0.461243 | tig0020787:+118810 | None:intergenic |
| TTTGGTTGACGGGCTTTGTA+AGG | 0.466132 | tig0020787:-118066 | Msa1386240:five_prime_UTR |
| AAGATGCTTATTCAAAAGTC+AGG | 0.467910 | tig0020787:-114399 | Msa1386240:CDS |
| GATTGATGGTTTGAGAGGAT+TGG | 0.470434 | tig0020787:-117853 | Msa1386240:five_prime_UTR |
| GGTTTGTGGGCAAGAGAAGA+TGG | 0.472173 | tig0020787:+118529 | None:intergenic |
| CTTGATAATGCCTACGGTGT+TGG | 0.475774 | tig0020787:+117514 | None:intergenic |
| TGAATTGCAAAACGGAAAAT+GGG | 0.476288 | tig0020787:+118503 | None:intergenic |
| TCCTTATCCTTCATTTAGGA+GGG | 0.478639 | tig0020787:+114338 | None:intergenic |
| CTTATAAAATTCTGGTTGCT+GGG | 0.479719 | tig0020787:-117653 | Msa1386240:five_prime_UTR |
| AGAGCATTGGCAGGGGTTGG+TGG | 0.481929 | tig0020787:+118556 | None:intergenic |
| TTGCAAGTCCACTTTGAAGA+TGG | 0.483089 | tig0020787:-117322 | Msa1386240:intron |
| CTTCAAGATCTTTGTGATGC+GGG | 0.483600 | tig0020787:-117744 | Msa1386240:five_prime_UTR |
| AAACAATATAAGATTTAACT+TGG | 0.484989 | tig0020787:-117465 | Msa1386240:five_prime_UTR |
| CATTATCAAGTGAACAAGAT+TGG | 0.487154 | tig0020787:-117501 | Msa1386240:five_prime_UTR |
| GATGGCTTGAGAGCATTGGC+AGG | 0.489023 | tig0020787:+118547 | None:intergenic |
| AGATGAAAGTGAGGAGGGTG+CGG | 0.490110 | tig0020787:+118579 | None:intergenic |
| AGATTACTTGCTTCAAGCAA+AGG | 0.493370 | tig0020787:-117696 | Msa1386240:five_prime_UTR |
| AAGTCGAAGTGGGTGAAAGA+AGG | 0.494239 | tig0020787:+118707 | None:intergenic |
| TGAAAGTGAGGAGGGTGCGG+AGG | 0.494306 | tig0020787:+118582 | None:intergenic |
| ATAATCAGATGGTTAAGGAT+AGG | 0.494625 | tig0020787:-118328 | Msa1386240:five_prime_UTR |
| TGCACAACCGATGAGGAGGC+AGG | 0.495735 | tig0020787:+116196 | None:intergenic |
| ATCAAGTGAACAAGATTGGC+AGG | 0.496640 | tig0020787:-117497 | Msa1386240:five_prime_UTR |
| TATTCAAAAGTCAGGCTCCA+TGG | 0.497611 | tig0020787:-114391 | Msa1386240:CDS |
| GCCTCCTCATCGGTTGTGCA+TGG | 0.498821 | tig0020787:-116193 | Msa1386240:CDS |
| GGTTGAGGAAATGGAGGAAG+TGG | 0.501724 | tig0020787:+118798 | None:intergenic |
| TGGAAGCCCAAGAGAAGAGA+TGG | 0.504606 | tig0020787:+118684 | None:intergenic |
| ACAGGCGTGTGATTTGTTGA+TGG | 0.507777 | tig0020787:-118030 | Msa1386240:five_prime_UTR |
| AGAAGATGGCTTGAGAGCAT+TGG | 0.508535 | tig0020787:+118543 | None:intergenic |
| GTAGGATTGATGAAGGGATT+GGG | 0.509129 | tig0020787:-118145 | Msa1386240:five_prime_UTR |
| TGCGCCTCCCTCTGCTGCAC+AGG | 0.509166 | tig0020787:-116161 | Msa1386240:intron |
| AGTCGAAGTGGGTGAAAGAA+GGG | 0.512098 | tig0020787:+118708 | None:intergenic |
| GAAGAGATGGAAGTCGAAGT+GGG | 0.516775 | tig0020787:+118697 | None:intergenic |
| TTATTATATGAAGCAAGATC+AGG | 0.525958 | tig0020787:+117561 | None:intergenic |
| TAGATGTGTTCGTGGAGGAA+TGG | 0.529377 | tig0020787:-114476 | Msa1386240:CDS |
| AGTGATGTGATTGTTGGTGG+TGG | 0.530217 | tig0020787:+118857 | None:intergenic |
| GAGTTTGGATTTGAGGAAGT+GGG | 0.530778 | tig0020787:+118739 | None:intergenic |
| GTTGACGGGCTTTGTAAGGA+AGG | 0.532301 | tig0020787:-118062 | Msa1386240:five_prime_UTR |
| ATTTATGAGTTGTGGAGCAA+AGG | 0.534265 | tig0020787:-117909 | Msa1386240:five_prime_UTR |
| ATTCAAAAGTCAGGCTCCAT+GGG | 0.536366 | tig0020787:-114390 | Msa1386240:CDS |
| ATATTAAAAGTAAACACATC+AGG | 0.537741 | tig0020787:+118299 | None:intergenic |
| TGGAGATGTTTGATGAAATG+AGG | 0.540220 | tig0020787:-118232 | Msa1386240:five_prime_UTR |
| GTGAGAGAAGGTGTCAAGGG+TGG | 0.540681 | tig0020787:+118664 | None:intergenic |
| TCATATAATAAGTTGATGGA+TGG | 0.544029 | tig0020787:-117549 | Msa1386240:five_prime_UTR |
| GGAGGTGTGGTTGTGAGAGA+AGG | 0.545393 | tig0020787:+118652 | None:intergenic |
| GTGTGCTTCAATCTCCTCGA+CGG | 0.546739 | tig0020787:-114447 | Msa1386240:CDS |
| GATTGATGAAGGGATTGGGA+TGG | 0.546805 | tig0020787:-118141 | Msa1386240:five_prime_UTR |
| CGGGCTTTGTAAGGAAGGGA+AGG | 0.547322 | tig0020787:-118057 | Msa1386240:five_prime_UTR |
| GTTGAGGAAATGGAGGAAGT+GGG | 0.550410 | tig0020787:+118799 | None:intergenic |
| CCACACCTCCTACGAATGGA+TGG | 0.551673 | tig0020787:-118639 | Msa1386240:five_prime_UTR |
| AGAAGAGATGGAAGTCGAAG+TGG | 0.552252 | tig0020787:+118696 | None:intergenic |
| GGGAAGAGTGATGTGATTGT+TGG | 0.554072 | tig0020787:+118851 | None:intergenic |
| TTGCATTTAATGTTATGCGT+AGG | 0.556316 | tig0020787:-118442 | Msa1386240:five_prime_UTR |
| GAACCAACCCTCCTAAATGA+AGG | 0.556466 | tig0020787:-114345 | None:intergenic |
| AGTAAGACTGAATTGCAAAA+CGG | 0.562630 | tig0020787:+118495 | None:intergenic |
| GAGCAGCGAATTGTAGATGA+TGG | 0.564385 | tig0020787:+116218 | None:intergenic |
| TAGCAGAGCCAGAGGGAGAG+AGG | 0.564929 | tig0020787:+118971 | None:intergenic |
| TGTTCACTTGATAATGCCTA+CGG | 0.566382 | tig0020787:+117508 | None:intergenic |
| AAGATCTTTGTGATGCGGGA+AGG | 0.568642 | tig0020787:-117740 | Msa1386240:five_prime_UTR |
| CCTTCAAGATCTTTGTGATG+CGG | 0.570762 | tig0020787:-117745 | Msa1386240:five_prime_UTR |
| ACAATACAAGAAATCAAGCT+AGG | 0.570810 | tig0020787:+117879 | None:intergenic |
| GGTGGAGATGAAAGTGAGGA+GGG | 0.574042 | tig0020787:+118574 | None:intergenic |
| TAAATGAAATGCTTGATAAG+GGG | 0.576634 | tig0020787:-117590 | Msa1386240:five_prime_UTR |
| CCCGTCAACCAAAATCTCAC+AGG | 0.584991 | tig0020787:+118076 | None:intergenic |
| TCACAGGTAACATCAGAAAG+TGG | 0.587270 | tig0020787:+118092 | None:intergenic |
| GTATGTTACCTGTGCAGCAG+AGG | 0.587827 | tig0020787:+116153 | None:intergenic |
| AGGATTGGGGAAGATTGAAG+AGG | 0.588100 | tig0020787:-117838 | Msa1386240:five_prime_UTR |
| AGTGGGTGAAAGAAGGGTGG+TGG | 0.589081 | tig0020787:+118714 | None:intergenic |
| TGAAAGAGTATGAAGACCAC+TGG | 0.589790 | tig0020787:-116241 | Msa1386240:exon |
| GTTGCTGGGTATAGAGGAGA+GGG | 0.590731 | tig0020787:-117639 | Msa1386240:five_prime_UTR |
| GGTGGTGGTTGAGGAAATGG+AGG | 0.592582 | tig0020787:+118792 | None:intergenic |
| GGAGAGGGAAATCAAGCAGA+AGG | 0.592690 | tig0020787:-117624 | Msa1386240:five_prime_UTR |
| CCATCCATTCGTAGGAGGTG+TGG | 0.592817 | tig0020787:+118639 | None:intergenic |
| TGGCTTGAGAGCATTGGCAG+GGG | 0.596229 | tig0020787:+118549 | None:intergenic |
| GGGAATGTAGGATTGATGAA+GGG | 0.597823 | tig0020787:-118151 | Msa1386240:five_prime_UTR |
| AGCACCAACCATCTTCAAAG+TGG | 0.599416 | tig0020787:+117314 | None:intergenic |
| GAAGTGGGTTAGGGTTTGTG+GGG | 0.600198 | tig0020787:+118754 | None:intergenic |
| GAATGTACTAGATGTGTTCG+TGG | 0.600350 | tig0020787:-114484 | Msa1386240:CDS |
| TGTTTGGGATAAGATTGTTG+AGG | 0.603557 | tig0020787:-117431 | Msa1386240:five_prime_UTR |
| TTGACGGGCTTTGTAAGGAA+GGG | 0.604933 | tig0020787:-118061 | Msa1386240:five_prime_UTR |
| AAGAGTGATGTGATTGTTGG+TGG | 0.605240 | tig0020787:+118854 | None:intergenic |
| ACAACCACACCTCCTACGAA+TGG | 0.606639 | tig0020787:-118643 | Msa1386240:five_prime_UTR |
| TTTATGAGATGATTGAATTG+GGG | 0.607383 | tig0020787:-118118 | Msa1386240:five_prime_UTR |
| ATGGCTTGAGAGCATTGGCA+GGG | 0.607636 | tig0020787:+118548 | None:intergenic |
| GGTTGTGAGAGAAGGTGTCA+AGG | 0.608285 | tig0020787:+118660 | None:intergenic |
| GGTTGGTGGAGATGAAAGTG+AGG | 0.611173 | tig0020787:+118570 | None:intergenic |
| TGGTGGAGATGAAAGTGAGG+AGG | 0.612345 | tig0020787:+118573 | None:intergenic |
| TATATAATTGCCAACACCGT+AGG | 0.612403 | tig0020787:-117524 | Msa1386240:five_prime_UTR |
| ATATTACAAACCGAAACACT+CGG | 0.613026 | tig0020787:+118404 | None:intergenic |
| GAATGGACTAGCAGAGCCAG+AGG | 0.613607 | tig0020787:+118963 | None:intergenic |
| CGAAGTGGGTGAAAGAAGGG+TGG | 0.618797 | tig0020787:+118711 | None:intergenic |
| GTTGTGAGAGAAGGTGTCAA+GGG | 0.619925 | tig0020787:+118661 | None:intergenic |
| GTGATGATTGATGGTTTGAG+AGG | 0.620383 | tig0020787:-117858 | Msa1386240:five_prime_UTR |
| ACGTGCCATCCATTCGTAGG+AGG | 0.620656 | tig0020787:+118634 | None:intergenic |
| TATGTTACCTGTGCAGCAGA+GGG | 0.620757 | tig0020787:+116154 | None:intergenic |
| ACCATGCACAACCGATGAGG+AGG | 0.621885 | tig0020787:+116192 | None:intergenic |
| GTTACCTGTGCAGCAGAGGG+AGG | 0.626972 | tig0020787:+116157 | None:intergenic |
| AGTAACATACATAAGACCCA+TGG | 0.641591 | tig0020787:+114374 | None:intergenic |
| TTGATGGTTTGAGAGGATTG+GGG | 0.643683 | tig0020787:-117851 | Msa1386240:five_prime_UTR |
| GGTTGCTGGGTATAGAGGAG+AGG | 0.647348 | tig0020787:-117640 | Msa1386240:five_prime_UTR |
| CGCTTGTGGGAACCCCGTCG+AGG | 0.647356 | tig0020787:+114433 | None:intergenic |
| AGTACGTGCCATCCATTCGT+AGG | 0.650285 | tig0020787:+118631 | None:intergenic |
| AATGGACTAGCAGAGCCAGA+GGG | 0.665952 | tig0020787:+118964 | None:intergenic |
| AGAACCATGCACAACCGATG+AGG | 0.680944 | tig0020787:+116189 | None:intergenic |
| TTGATGAAATGAGGAAAATG+GGG | 0.682853 | tig0020787:-118223 | Msa1386240:five_prime_UTR |
| GAATTGTAGATGATGGCCAG+TGG | 0.712157 | tig0020787:+116225 | None:intergenic |
| GTGCTTCAATCTCCTCGACG+GGG | 0.719267 | tig0020787:-114445 | Msa1386240:CDS |
| TACATTCAAAGAAAGCAGTG+CGG | 0.739974 | tig0020787:+114500 | None:intergenic |
| TGTACTAGATGTGTTCGTGG+AGG | 0.754728 | tig0020787:-114481 | Msa1386240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAATTTAGAAATAT+TGG | + | tig0020787:117458-117477 | None:intergenic | 10.0% |
| !! | TAACAAATATAAAGATTAAT+GGG | + | tig0020787:117939-117958 | None:intergenic | 10.0% |
| !!! | TTTGTAATATTTTGATTCAT+GGG | - | tig0020787:115030-115049 | Msa1386240:intron | 15.0% |
| !!! | ACTTTTAATACTTTGATTAA+AGG | - | tig0020787:115239-115258 | Msa1386240:intron | 15.0% |
| !!! | CTTTTAATACTTTGATTAAA+GGG | - | tig0020787:115240-115259 | Msa1386240:intron | 15.0% |
| !! | AAACAATATAAGATTTAACT+TGG | - | tig0020787:115956-115975 | Msa1386240:intron | 15.0% |
| !! | AATAAACATATGAATCATTA+AGG | + | tig0020787:117712-117731 | None:intergenic | 15.0% |
| !!! | ATTCATATGTTTATTCTTTT+GGG | - | tig0020787:117717-117736 | Msa1386240:five_prime_UTR | 15.0% |
| !! | GTAACAAATATAAAGATTAA+TGG | + | tig0020787:117940-117959 | None:intergenic | 15.0% |
| !!! | TTATATTTGTTACTTCATTT+TGG | - | tig0020787:117947-117966 | Msa1386240:five_prime_UTR | 15.0% |
| !! | GAAGAAAAAAAAAATCTATT+TGG | + | tig0020787:118524-118543 | None:intergenic | 15.0% |
| !! | CATAGTTAAAAATGTAATTA+TGG | + | tig0020787:118715-118734 | None:intergenic | 15.0% |
| !!! | GTTTGTAATATTTTGATTCA+TGG | - | tig0020787:115029-115048 | Msa1386240:intron | 20.0% |
| !!! | TTTTGAGTTTTATAATCAGA+TGG | - | tig0020787:115082-115101 | Msa1386240:intron | 20.0% |
| !! | ATATTAAAAGTAAACACATC+AGG | + | tig0020787:115125-115144 | None:intergenic | 20.0% |
| !!! | ACTTTTAATATCTTGATTAG+TGG | - | tig0020787:115134-115153 | Msa1386240:intron | 20.0% |
| !!! | TTTTAAATTTAGTTGTGCAT+TGG | - | tig0020787:115169-115188 | Msa1386240:intron | 20.0% |
| !! | GTATTAAAAGTAACAACATT+TGG | + | tig0020787:115230-115249 | None:intergenic | 20.0% |
| !! | TTGTAAATATTTCCATTTCA+TGG | - | tig0020787:116194-116213 | Msa1386240:CDS | 20.0% |
| !! | AAACAACTAAAATCAACATA+AGG | - | tig0020787:116547-116566 | Msa1386240:intron | 20.0% |
| !! | GCTATTATTTAAAAATCTGT+TGG | + | tig0020787:116885-116904 | None:intergenic | 20.0% |
| !! | TATAAGCTTATAAGCAATAA+GGG | - | tig0020787:116991-117010 | Msa1386240:intron | 20.0% |
| !!! | GAATTTTTGATGTATACAAT+TGG | - | tig0020787:117045-117064 | Msa1386240:intron | 20.0% |
| !! | AAAATTTAGAAATATTGGTG+TGG | + | tig0020787:117453-117472 | None:intergenic | 20.0% |
| !!! | TTTCTAGTTAGTACTTAAAA+AGG | - | tig0020787:117476-117495 | Msa1386240:five_prime_UTR | 20.0% |
| !! | TATGATATTACCAAAAAGAA+TGG | + | tig0020787:117589-117608 | None:intergenic | 20.0% |
| !!! | GATTCATATGTTTATTCTTT+TGG | - | tig0020787:117716-117735 | Msa1386240:five_prime_UTR | 20.0% |
| !!! | TTCATATGTTTATTCTTTTG+GGG | - | tig0020787:117718-117737 | Msa1386240:five_prime_UTR | 20.0% |
| !!! | ATGTCTTTTTCTCATTTTTT+TGG | - | tig0020787:118468-118487 | Msa1386240:five_prime_UTR | 20.0% |
| !!! | TGTCTTTTTCTCATTTTTTT+GGG | - | tig0020787:118469-118488 | Msa1386240:five_prime_UTR | 20.0% |
| !! | AAACAAAAACTATTTCAAAC+AGG | - | tig0020787:118592-118611 | Msa1386240:five_prime_UTR | 20.0% |
| !! | TTAAAATCAACAATTTGTGT+AGG | - | tig0020787:118794-118813 | Msa1386240:five_prime_UTR | 20.0% |
| !! | GTTTTATAATCAGATGGTTA+AGG | - | tig0020787:115088-115107 | Msa1386240:intron | 25.0% |
| ! | TTTGATGAAATGAGGAAAAT+GGG | - | tig0020787:115197-115216 | Msa1386240:intron | 25.0% |
| ! | TTTGATTAAAGGGTTGTTTA+GGG | - | tig0020787:115250-115269 | Msa1386240:intron | 25.0% |
| ! | GTTTATGAGATGATTGAATT+GGG | - | tig0020787:115302-115321 | Msa1386240:intron | 25.0% |
| ! | TTTATGAGATGATTGAATTG+GGG | - | tig0020787:115303-115322 | Msa1386240:intron | 25.0% |
| ! | ACAAAATAATCATACCCTTT+AGG | + | tig0020787:115440-115459 | None:intergenic | 25.0% |
| !!! | AGGGTATGATTATTTTGTTT+TGG | - | tig0020787:115442-115461 | Msa1386240:intron | 25.0% |
| !!! | GTATGATTATTTTGTTTTGG+TGG | - | tig0020787:115445-115464 | Msa1386240:intron | 25.0% |
| !! | AATTTTATAAGTCATGGCAT+CGG | + | tig0020787:115759-115778 | None:intergenic | 25.0% |
| !! | AACCAGAATTTTATAAGTCA+TGG | + | tig0020787:115765-115784 | None:intergenic | 25.0% |
| ! | GTAAATGAAATGCTTGATAA+GGG | - | tig0020787:115830-115849 | Msa1386240:intron | 25.0% |
| ! | TAAATGAAATGCTTGATAAG+GGG | - | tig0020787:115831-115850 | Msa1386240:intron | 25.0% |
| ! | TTATTATATGAAGCAAGATC+AGG | + | tig0020787:115863-115882 | None:intergenic | 25.0% |
| !! | TGCTTCATATAATAAGTTGA+TGG | - | tig0020787:115868-115887 | Msa1386240:intron | 25.0% |
| !!! | TCATATAATAAGTTGATGGA+TGG | - | tig0020787:115872-115891 | Msa1386240:intron | 25.0% |
| !! | AAATGTTACAATGAAGGTAT+GGG | + | tig0020787:116313-116332 | None:intergenic | 25.0% |
| ! | AAAATGTTACAATGAAGGTA+TGG | + | tig0020787:116314-116333 | None:intergenic | 25.0% |
| ! | ACATGAAAATGTTACAATGA+AGG | + | tig0020787:116319-116338 | None:intergenic | 25.0% |
| ! | AACTAATCACATCAAATTCT+AGG | + | tig0020787:116491-116510 | None:intergenic | 25.0% |
| ! | TGTACATTTATAAGCAACAA+TGG | + | tig0020787:116595-116614 | None:intergenic | 25.0% |
| ! | TTTAAATAATAGCAGCTTCT+AGG | - | tig0020787:116892-116911 | Msa1386240:intron | 25.0% |
| ! | TTAAATAATAGCAGCTTCTA+GGG | - | tig0020787:116893-116912 | Msa1386240:intron | 25.0% |
| ! | CTTATTGCTTATAAGCTTAT+AGG | + | tig0020787:116992-117011 | None:intergenic | 25.0% |
| ! | CTATAAGCTTATAAGCAATA+AGG | - | tig0020787:116990-117009 | Msa1386240:intron | 25.0% |
| ! | ATAAGCTTATAAGCAATAAG+GGG | - | tig0020787:116992-117011 | Msa1386240:intron | 25.0% |
| !!! | ACACATGTATTGTTTAGTTT+TGG | - | tig0020787:117375-117394 | Msa1386240:five_prime_UTR | 25.0% |
| ! | TGGTAATATCATATCTTCTA+TGG | - | tig0020787:117596-117615 | Msa1386240:five_prime_UTR | 25.0% |
| !!! | AAATATTTTAGACTGAAGGA+TGG | + | tig0020787:117744-117763 | None:intergenic | 25.0% |
| !!! | CTTCAAATATTTTAGACTGA+AGG | + | tig0020787:117748-117767 | None:intergenic | 25.0% |
| ! | TAGAATGAACACATTAAGTA+GGG | + | tig0020787:118057-118076 | None:intergenic | 25.0% |
| !! | GAAAAATAAAAGCACATTGA+AGG | + | tig0020787:118149-118168 | None:intergenic | 25.0% |
| ! | TGCAATACAATTACTTTCTT+TGG | - | tig0020787:118741-118760 | Msa1386240:five_prime_UTR | 25.0% |
| !! | CATGTCAATTTTCGTTTTTC+TGG | + | tig0020787:114487-114506 | None:intergenic | 30.0% |
| TGAATTGCAAAACGGAAAAT+GGG | + | tig0020787:114921-114940 | None:intergenic | 30.0% | |
| AGTAAGACTGAATTGCAAAA+CGG | + | tig0020787:114929-114948 | None:intergenic | 30.0% | |
| TTGCATTTAATGTTATGCGT+AGG | - | tig0020787:114979-114998 | Msa1386240:intron | 30.0% | |
| ATATTACAAACCGAAACACT+CGG | + | tig0020787:115020-115039 | None:intergenic | 30.0% | |
| !! | ATTCATGGGTTTGTTAAATC+TGG | - | tig0020787:115044-115063 | Msa1386240:intron | 30.0% |
| ATAATCAGATGGTTAAGGAT+AGG | - | tig0020787:115093-115112 | Msa1386240:intron | 30.0% | |
| TCTTGATTAGTGGTTATTGT+AGG | - | tig0020787:115144-115163 | Msa1386240:intron | 30.0% | |
| CTTGATTAGTGGTTATTGTA+GGG | - | tig0020787:115145-115164 | Msa1386240:intron | 30.0% | |
| GTTTGATGAAATGAGGAAAA+TGG | - | tig0020787:115196-115215 | Msa1386240:intron | 30.0% | |
| TTGATGAAATGAGGAAAATG+GGG | - | tig0020787:115198-115217 | Msa1386240:intron | 30.0% | |
| CTTTGATTAAAGGGTTGTTT+AGG | - | tig0020787:115249-115268 | Msa1386240:intron | 30.0% | |
| GGTTTATGAGATGATTGAAT+TGG | - | tig0020787:115301-115320 | Msa1386240:intron | 30.0% | |
| ! | TTTTGGTGGAAATTTTGTGT+GGG | - | tig0020787:115459-115478 | Msa1386240:intron | 30.0% |
| ACAATACAAGAAATCAAGCT+AGG | + | tig0020787:115545-115564 | None:intergenic | 30.0% | |
| TCTTGTATTGTGATGATTGA+TGG | - | tig0020787:115554-115573 | Msa1386240:intron | 30.0% | |
| GGTTGAAAAAATGCTTAAAG+AGG | - | tig0020787:115616-115635 | Msa1386240:intron | 30.0% | |
| TGAAAAAATGCTTAAAGAGG+AGG | - | tig0020787:115619-115638 | Msa1386240:intron | 30.0% | |
| GAAAAAATGCTTAAAGAGGA+GGG | - | tig0020787:115620-115639 | Msa1386240:intron | 30.0% | |
| ! | ATTTTATAAGTCATGGCATC+GGG | + | tig0020787:115758-115777 | None:intergenic | 30.0% |
| TGCCATGACTTATAAAATTC+TGG | - | tig0020787:115760-115779 | Msa1386240:intron | 30.0% | |
| ! | ACTTATAAAATTCTGGTTGC+TGG | - | tig0020787:115767-115786 | Msa1386240:intron | 30.0% |
| ! | CTTATAAAATTCTGGTTGCT+GGG | - | tig0020787:115768-115787 | Msa1386240:intron | 30.0% |
| GGTAAATGAAATGCTTGATA+AGG | - | tig0020787:115829-115848 | Msa1386240:intron | 30.0% | |
| CATTATCAAGTGAACAAGAT+TGG | - | tig0020787:115920-115939 | Msa1386240:intron | 30.0% | |
| ! | TTGGTTGTCAAACTTTGTTT+GGG | - | tig0020787:115975-115994 | Msa1386240:intron | 30.0% |
| TGATATCTTGTAACTCACAA+AGG | + | tig0020787:116245-116264 | None:intergenic | 30.0% | |
| CTTATCCTCTACTATAGAAA+TGG | - | tig0020787:117094-117113 | Msa1386240:intron | 30.0% | |
| GTGATTGATCGTTACTAAAT+AGG | - | tig0020787:117147-117166 | Msa1386240:intron | 30.0% | |
| ATGAAGTATGACTATACCTT+AGG | - | tig0020787:117335-117354 | Msa1386240:five_prime_UTR | 30.0% | |
| TGAAAAAATGCATATGCCTA+AGG | + | tig0020787:117354-117373 | None:intergenic | 30.0% | |
| ! | CATCTCAATGCTAGTTTAAT+GGG | - | tig0020787:117404-117423 | Msa1386240:five_prime_UTR | 30.0% |
| ATTTAGAAATATTGGTGTGG+TGG | + | tig0020787:117450-117469 | None:intergenic | 30.0% | |
| ATAAATGAGGCTACATATAC+TGG | + | tig0020787:117566-117585 | None:intergenic | 30.0% | |
| CCAAAAAGAATGGATAAATG+AGG | + | tig0020787:117579-117598 | None:intergenic | 30.0% | |
| ! | CCTCATTTATCCATTCTTTT+TGG | - | tig0020787:117576-117595 | Msa1386240:five_prime_UTR | 30.0% |
| AGACAAAATCTTAGAGGATA+TGG | + | tig0020787:117680-117699 | None:intergenic | 30.0% | |
| !!! | TCCTCTAAGATTTTGTCTAT+TGG | - | tig0020787:117682-117701 | Msa1386240:five_prime_UTR | 30.0% |
| GTTTCAGATATTGACACTAT+GGG | + | tig0020787:117794-117813 | None:intergenic | 30.0% | |
| TGTTTCAGATATTGACACTA+TGG | + | tig0020787:117795-117814 | None:intergenic | 30.0% | |
| !! | TACTTCATTTTGGCATAAGT+TGG | - | tig0020787:117957-117976 | Msa1386240:five_prime_UTR | 30.0% |
| TTCATCATTCATTCTTGCAA+TGG | - | tig0020787:117982-118001 | Msa1386240:five_prime_UTR | 30.0% | |
| TGATTGTTGATCCAAAGTAA+AGG | + | tig0020787:118013-118032 | None:intergenic | 30.0% | |
| CTAGAATGAACACATTAAGT+AGG | + | tig0020787:118058-118077 | None:intergenic | 30.0% | |
| TTACTTCCACACTGAATTAT+GGG | + | tig0020787:118110-118129 | None:intergenic | 30.0% | |
| TTTACTTCCACACTGAATTA+TGG | + | tig0020787:118111-118130 | None:intergenic | 30.0% | |
| TTTAGACTGAGTTTACTTTG+TGG | - | tig0020787:118188-118207 | Msa1386240:five_prime_UTR | 30.0% | |
| GTTTCTATCGTTAGTTAGTT+TGG | + | tig0020787:118295-118314 | None:intergenic | 30.0% | |
| ACTAACGATAGAAACATTTG+AGG | - | tig0020787:118300-118319 | Msa1386240:five_prime_UTR | 30.0% | |
| !! | TTAACTCATTGATTTGTCGT+TGG | - | tig0020787:118836-118855 | Msa1386240:five_prime_UTR | 30.0% |
| AAGATGCTTATTCAAAAGTC+AGG | - | tig0020787:119022-119041 | Msa1386240:five_prime_UTR | 30.0% | |
| CTGAATTGCAAAACGGAAAA+TGG | + | tig0020787:114922-114941 | None:intergenic | 35.0% | |
| GTTATGCGTAGGTTAATTGA+TGG | - | tig0020787:114990-115009 | Msa1386240:intron | 35.0% | |
| TGGAGATGTTTGATGAAATG+AGG | - | tig0020787:115189-115208 | Msa1386240:intron | 35.0% | |
| ! | TGATGTTACCTGTGAGATTT+TGG | - | tig0020787:115337-115356 | Msa1386240:intron | 35.0% |
| !! | GTTTTGGTGGAAATTTTGTG+TGG | - | tig0020787:115458-115477 | Msa1386240:intron | 35.0% |
| TGGAGGTTATTTATGAGTTG+TGG | - | tig0020787:115504-115523 | Msa1386240:intron | 35.0% | |
| ATTTATGAGTTGTGGAGCAA+AGG | - | tig0020787:115512-115531 | Msa1386240:intron | 35.0% | |
| ! | ATTGATGGTTTGAGAGGATT+GGG | - | tig0020787:115569-115588 | Msa1386240:intron | 35.0% |
| TCTCAACCTATTTGCATCTT+CGG | + | tig0020787:115708-115727 | None:intergenic | 35.0% | |
| AGATTACTTGCTTCAAGCAA+AGG | - | tig0020787:115725-115744 | Msa1386240:intron | 35.0% | |
| TATATAATTGCCAACACCGT+AGG | - | tig0020787:115897-115916 | Msa1386240:intron | 35.0% | |
| !! | TGTTCACTTGATAATGCCTA+CGG | + | tig0020787:115916-115935 | None:intergenic | 35.0% |
| CTTGGTTGTCAAACTTTGTT+TGG | - | tig0020787:115974-115993 | Msa1386240:intron | 35.0% | |
| ! | TGTTTGGGATAAGATTGTTG+AGG | - | tig0020787:115990-116009 | Msa1386240:intron | 35.0% |
| ! | CTGAATTTTCAGCTGATTAC+AGG | + | tig0020787:116033-116052 | None:intergenic | 35.0% |
| TTACAATGTTCACTAGCATC+AGG | + | tig0020787:116180-116199 | None:intergenic | 35.0% | |
| ! | TGACTGTGCAAATTTTGTGA+TGG | - | tig0020787:116631-116650 | Msa1386240:intron | 35.0% |
| GATGACTCTACTATTGTGTT+AGG | - | tig0020787:116768-116787 | Msa1386240:intron | 35.0% | |
| CTACTATTGTGTTAGGATCA+TGG | - | tig0020787:116775-116794 | Msa1386240:intron | 35.0% | |
| TATTGTGTTAGGATCATGGA+AGG | - | tig0020787:116779-116798 | Msa1386240:intron | 35.0% | |
| ATTGTGTTAGGATCATGGAA+GGG | - | tig0020787:116780-116799 | Msa1386240:intron | 35.0% | |
| TTTCCATGGTCTGAAGAAAA+AGG | - | tig0020787:117023-117042 | Msa1386240:intron | 35.0% | |
| ! | ATTCCTTTTTCTTCAGACCA+TGG | + | tig0020787:117029-117048 | None:intergenic | 35.0% |
| CCTTACCATTTCTATAGTAG+AGG | + | tig0020787:117102-117121 | None:intergenic | 35.0% | |
| CCTCTACTATAGAAATGGTA+AGG | - | tig0020787:117099-117118 | Msa1386240:intron | 35.0% | |
| ! | GCATCTCAATGCTAGTTTAA+TGG | - | tig0020787:117403-117422 | Msa1386240:five_prime_UTR | 35.0% |
| ! | GATCTGAGAGTATATGATGT+TGG | + | tig0020787:117528-117547 | None:intergenic | 35.0% |
| GCCAATAGACAAAATCTTAG+AGG | + | tig0020787:117686-117705 | None:intergenic | 35.0% | |
| TCAGACTGAAACCACTTATT+TGG | + | tig0020787:117871-117890 | None:intergenic | 35.0% | |
| ! | ATAAAAGCACATTGAAGGTG+CGG | + | tig0020787:118144-118163 | None:intergenic | 35.0% |
| ! | GAAACACAAATGCTGTGTTT+TGG | - | tig0020787:118218-118237 | Msa1386240:five_prime_UTR | 35.0% |
| ! | GTTTTATGTGAGTAGGTTTC+AGG | - | tig0020787:118621-118640 | Msa1386240:five_prime_UTR | 35.0% |
| ! | TGATTTGTCGTTGGAATTTC+AGG | - | tig0020787:118845-118864 | Msa1386240:five_prime_UTR | 35.0% |
| GATTTGTCGTTGGAATTTCA+GGG | - | tig0020787:118846-118865 | Msa1386240:five_prime_UTR | 35.0% | |
| ATTTGTCGTTGGAATTTCAG+GGG | - | tig0020787:118847-118866 | Msa1386240:five_prime_UTR | 35.0% | |
| TACATTCAAAGAAAGCAGTG+CGG | + | tig0020787:118924-118943 | None:intergenic | 35.0% | |
| ! | TTTGTTATACTTGCGCTTGT+GGG | + | tig0020787:119004-119023 | None:intergenic | 35.0% |
| AGTAACATACATAAGACCCA+TGG | + | tig0020787:119050-119069 | None:intergenic | 35.0% | |
| ! | TGTCTTTTTGACACGAGTGT+AGG | + | tig0020787:114371-114390 | None:intergenic | 40.0% |
| AACCGCACAACAAAAACAAC+AGG | - | tig0020787:114397-114416 | Msa1386240:CDS | 40.0% | |
| !!! | GTCCTGTTGTTTTTGTTGTG+CGG | + | tig0020787:114402-114421 | None:intergenic | 40.0% |
| !!! | AGAGGGAGAGAGGTTTTTTT+AGG | + | tig0020787:114443-114462 | None:intergenic | 40.0% |
| TAAAAAAACCTCTCTCCCTC+TGG | - | tig0020787:114442-114461 | Msa1386240:CDS | 40.0% | |
| !! | TTTCGTTTTTCTGGCGTGAA+TGG | + | tig0020787:114478-114497 | None:intergenic | 40.0% |
| AAGAGTGATGTGATTGTTGG+TGG | + | tig0020787:114570-114589 | None:intergenic | 40.0% | |
| GAGTTTGGATTTGAGGAAGT+GGG | + | tig0020787:114685-114704 | None:intergenic | 40.0% | |
| ! | TGCAAAACGGAAAATGGGTT+CGG | + | tig0020787:114916-114935 | None:intergenic | 40.0% |
| TGATGGAAAACCGAGTGTTT+CGG | - | tig0020787:115007-115026 | Msa1386240:intron | 40.0% | |
| AAGGGTTGTTTAGGGAATGT+AGG | - | tig0020787:115258-115277 | Msa1386240:intron | 40.0% | |
| AGGGAATGTAGGATTGATGA+AGG | - | tig0020787:115269-115288 | Msa1386240:intron | 40.0% | |
| GGGAATGTAGGATTGATGAA+GGG | - | tig0020787:115270-115289 | Msa1386240:intron | 40.0% | |
| TGTAGGATTGATGAAGGGAT+TGG | - | tig0020787:115275-115294 | Msa1386240:intron | 40.0% | |
| GTAGGATTGATGAAGGGATT+GGG | - | tig0020787:115276-115295 | Msa1386240:intron | 40.0% | |
| TCACAGGTAACATCAGAAAG+TGG | + | tig0020787:115332-115351 | None:intergenic | 40.0% | |
| !!! | ACCTGTGAGATTTTGGTTGA+CGG | - | tig0020787:115344-115363 | Msa1386240:intron | 40.0% |
| ! | TAAGGAAGGGAAGGTTTTAC+AGG | - | tig0020787:115373-115392 | Msa1386240:intron | 40.0% |
| ! | TTGATGGAGTTTTCGAAGAG+AGG | - | tig0020787:115407-115426 | Msa1386240:intron | 40.0% |
| ! | TGATGGAGTTTTCGAAGAGA+GGG | - | tig0020787:115408-115427 | Msa1386240:intron | 40.0% |
| ! | GTGGAAATTTTGTGTGGGAA+AGG | - | tig0020787:115464-115483 | Msa1386240:intron | 40.0% |
| ! | AATTTTGTGTGGGAAAGGAG+AGG | - | tig0020787:115469-115488 | Msa1386240:intron | 40.0% |
| ! | GTGATGATTGATGGTTTGAG+AGG | - | tig0020787:115563-115582 | Msa1386240:intron | 40.0% |
| ! | GATTGATGGTTTGAGAGGAT+TGG | - | tig0020787:115568-115587 | Msa1386240:intron | 40.0% |
| ! | TTGATGGTTTGAGAGGATTG+GGG | - | tig0020787:115570-115589 | Msa1386240:intron | 40.0% |
| GATTGAAGAGGCAATGAGAT+TGG | - | tig0020787:115595-115614 | Msa1386240:intron | 40.0% | |
| AATGCTTAAAGAGGAGGGTT+TGG | - | tig0020787:115625-115644 | Msa1386240:intron | 40.0% | |
| CCTTCAAGATCTTTGTGATG+CGG | - | tig0020787:115676-115695 | Msa1386240:intron | 40.0% | |
| CTTCAAGATCTTTGTGATGC+GGG | - | tig0020787:115677-115696 | Msa1386240:intron | 40.0% | |
| ATCAAGTGAACAAGATTGGC+AGG | - | tig0020787:115924-115943 | Msa1386240:intron | 40.0% | |
| ! | TTTTGCGCAACGATGAAGAT+AGG | - | tig0020787:116070-116089 | Msa1386240:intron | 40.0% |
| ! | TTGCAAGTCCACTTTGAAGA+TGG | - | tig0020787:116099-116118 | Msa1386240:intron | 40.0% |
| ! | AAGTCCACTTTGAAGATGGT+TGG | - | tig0020787:116103-116122 | Msa1386240:intron | 40.0% |
| GTGTATCAGTCTCCATGAAA+TGG | + | tig0020787:116209-116228 | None:intergenic | 40.0% | |
| TGTAACTCACAAAGGAGACA+CGG | + | tig0020787:116237-116256 | None:intergenic | 40.0% | |
| TTATCAACGGTTTGTGGTAG+CGG | + | tig0020787:116394-116413 | None:intergenic | 40.0% | |
| ! | CTACCACAAACCGTTGATAA+AGG | - | tig0020787:116394-116413 | Msa1386240:intron | 40.0% |
| ! | TCATTTTGTCGTCACCTTAC+AGG | - | tig0020787:116822-116841 | Msa1386240:intron | 40.0% |
| TAAGTACATGTTGAGCTCCA+AGG | + | tig0020787:116852-116871 | None:intergenic | 40.0% | |
| !!! | AAGGGGAGTTTTGATTTCCA+TGG | - | tig0020787:117009-117028 | Msa1386240:intron | 40.0% |
| ! | TGAAAGAGTATGAAGACCAC+TGG | - | tig0020787:117180-117199 | Msa1386240:intron | 40.0% |
| ATACCTCACTTCCACTTGAA+TGG | - | tig0020787:117287-117306 | Msa1386240:intron | 40.0% | |
| TACCTCACTTCCACTTGAAT+GGG | - | tig0020787:117288-117307 | Msa1386240:intron | 40.0% | |
| TCAAAGAGAACCCATTCAAG+TGG | + | tig0020787:117301-117320 | None:intergenic | 40.0% | |
| AACGACTCTCACCAAATAAG+TGG | - | tig0020787:117857-117876 | Msa1386240:five_prime_UTR | 40.0% | |
| CAATGGGAAAGAATGAACTG+TGG | + | tig0020787:117903-117922 | None:intergenic | 40.0% | |
| CACAGTTCATTCTTTCCCAT+TGG | - | tig0020787:117901-117920 | Msa1386240:five_prime_UTR | 40.0% | |
| CAATGGCTACACCTTTACTT+TGG | - | tig0020787:117999-118018 | Msa1386240:five_prime_UTR | 40.0% | |
| GAATTATGGGAAGTTCAGTG+TGG | + | tig0020787:118097-118116 | None:intergenic | 40.0% | |
| GAACTTCCCATAATTCAGTG+TGG | - | tig0020787:118101-118120 | Msa1386240:five_prime_UTR | 40.0% | |
| TGCTTGAGAACTGAACTGTT+TGG | + | tig0020787:118429-118448 | None:intergenic | 40.0% | |
| !!! | GCACGTAGTTTTATGTGAGT+AGG | - | tig0020787:118614-118633 | Msa1386240:five_prime_UTR | 40.0% |
| TCACCTTTCATCTCTCTTTC+TGG | - | tig0020787:118765-118784 | Msa1386240:five_prime_UTR | 40.0% | |
| TGACCAGAAAGAGAGATGAA+AGG | + | tig0020787:118771-118790 | None:intergenic | 40.0% | |
| GAATGTACTAGATGTGTTCG+TGG | - | tig0020787:118937-118956 | Msa1386240:five_prime_UTR | 40.0% | |
| ! | CTTTGTTATACTTGCGCTTG+TGG | + | tig0020787:119005-119024 | None:intergenic | 40.0% |
| TATTCAAAAGTCAGGCTCCA+TGG | - | tig0020787:119030-119049 | Msa1386240:five_prime_UTR | 40.0% | |
| ATTCAAAAGTCAGGCTCCAT+GGG | - | tig0020787:119031-119050 | Msa1386240:five_prime_UTR | 40.0% | |
| ! | TAGGTGTTGTCGCTTCTGTT+TGG | + | tig0020787:114424-114443 | None:intergenic | 45.0% |
| ! | AGTGATGTGATTGTTGGTGG+TGG | + | tig0020787:114567-114586 | None:intergenic | 45.0% |
| GGGAAGAGTGATGTGATTGT+TGG | + | tig0020787:114573-114592 | None:intergenic | 45.0% | |
| GTTGAGGAAATGGAGGAAGT+GGG | + | tig0020787:114625-114644 | None:intergenic | 45.0% | |
| !! | GGATTTGAGGAAGTGGGTTA+GGG | + | tig0020787:114679-114698 | None:intergenic | 45.0% |
| ! | TGGATTTGAGGAAGTGGGTT+AGG | + | tig0020787:114680-114699 | None:intergenic | 45.0% |
| GGAGTTTGGATTTGAGGAAG+TGG | + | tig0020787:114686-114705 | None:intergenic | 45.0% | |
| AGTCGAAGTGGGTGAAAGAA+GGG | + | tig0020787:114716-114735 | None:intergenic | 45.0% | |
| AAGTCGAAGTGGGTGAAAGA+AGG | + | tig0020787:114717-114736 | None:intergenic | 45.0% | |
| GAAGAGATGGAAGTCGAAGT+GGG | + | tig0020787:114727-114746 | None:intergenic | 45.0% | |
| AGAAGAGATGGAAGTCGAAG+TGG | + | tig0020787:114728-114747 | None:intergenic | 45.0% | |
| TCGACTTCCATCTCTTCTCT+TGG | - | tig0020787:114730-114749 | Msa1386240:intron | 45.0% | |
| CGACTTCCATCTCTTCTCTT+GGG | - | tig0020787:114731-114750 | Msa1386240:intron | 45.0% | |
| !! | GTTGTGAGAGAAGGTGTCAA+GGG | + | tig0020787:114763-114782 | None:intergenic | 45.0% |
| ! | AGAAGATGGCTTGAGAGCAT+TGG | + | tig0020787:114881-114900 | None:intergenic | 45.0% |
| ! | GGAAAATGGGTTCGGTTTGT+GGG | + | tig0020787:114908-114927 | None:intergenic | 45.0% |
| GATTGATGAAGGGATTGGGA+TGG | - | tig0020787:115280-115299 | Msa1386240:intron | 45.0% | |
| !!! | CCTGTGAGATTTTGGTTGAC+GGG | - | tig0020787:115345-115364 | Msa1386240:intron | 45.0% |
| !! | TTTGGTTGACGGGCTTTGTA+AGG | - | tig0020787:115355-115374 | Msa1386240:intron | 45.0% |
| !! | TTGACGGGCTTTGTAAGGAA+GGG | - | tig0020787:115360-115379 | Msa1386240:intron | 45.0% |
| !! | ACAGGCGTGTGATTTGTTGA+TGG | - | tig0020787:115391-115410 | Msa1386240:intron | 45.0% |
| ! | GATGGAGTTTTCGAAGAGAG+GGG | - | tig0020787:115409-115428 | Msa1386240:intron | 45.0% |
| ! | AAGAGAGGGGTTTTGCCTAA+AGG | - | tig0020787:115422-115441 | Msa1386240:intron | 45.0% |
| ! | AGAGAGGGGTTTTGCCTAAA+GGG | - | tig0020787:115423-115442 | Msa1386240:intron | 45.0% |
| ! | TGGGAAAGGAGAGGCTTTTA+AGG | - | tig0020787:115478-115497 | Msa1386240:intron | 45.0% |
| !!! | AGGAGAGGCTTTTAAGGCTT+TGG | - | tig0020787:115484-115503 | Msa1386240:intron | 45.0% |
| !!! | AGAGGCTTTTAAGGCTTTGG+AGG | - | tig0020787:115487-115506 | Msa1386240:intron | 45.0% |
| AGGATTGGGGAAGATTGAAG+AGG | - | tig0020787:115583-115602 | Msa1386240:intron | 45.0% | |
| CCGCATCACAAAGATCTTGA+AGG | + | tig0020787:115679-115698 | None:intergenic | 45.0% | |
| AAGATCTTTGTGATGCGGGA+AGG | - | tig0020787:115681-115700 | Msa1386240:intron | 45.0% | |
| GAAGGACCGAAGATGCAAAT+AGG | - | tig0020787:115699-115718 | Msa1386240:intron | 45.0% | |
| ! | ATTCTGGTTGCTGGGTATAG+AGG | - | tig0020787:115776-115795 | Msa1386240:intron | 45.0% |
| TCAAGCAGAAGGAGAGTTAG+TGG | - | tig0020787:115808-115827 | Msa1386240:intron | 45.0% | |
| !! | CTTGATAATGCCTACGGTGT+TGG | + | tig0020787:115910-115929 | None:intergenic | 45.0% |
| AGCACCAACCATCTTCAAAG+TGG | + | tig0020787:116110-116129 | None:intergenic | 45.0% | |
| ! | TGGTTGGTGCTCTAAACTCA+CGG | - | tig0020787:116119-116138 | Msa1386240:intron | 45.0% |
| TATCAACGGTTTGTGGTAGC+GGG | + | tig0020787:116393-116412 | None:intergenic | 45.0% | |
| TGGCCTTTATCAACGGTTTG+TGG | + | tig0020787:116400-116419 | None:intergenic | 45.0% | |
| ! | ACAAACCGTTGATAAAGGCC+AGG | - | tig0020787:116399-116418 | Msa1386240:intron | 45.0% |
| ! | CAAACCGTTGATAAAGGCCA+GGG | - | tig0020787:116400-116419 | Msa1386240:intron | 45.0% |
| ! | AAACCGTTGATAAAGGCCAG+GGG | - | tig0020787:116401-116420 | Msa1386240:intron | 45.0% |
| TAAAGGCCAGGGGTAGAATT+TGG | - | tig0020787:116411-116430 | Msa1386240:intron | 45.0% | |
| TGGTGTCTCCTTAATCTCTG+CGG | - | tig0020787:116431-116450 | Msa1386240:intron | 45.0% | |
| ACATGTGACCGCAGAGATTA+AGG | + | tig0020787:116442-116461 | None:intergenic | 45.0% | |
| TTAATCTCTGCGGTCACATG+TGG | - | tig0020787:116441-116460 | Msa1386240:intron | 45.0% | |
| ! | GAATTGTAGATGATGGCCAG+TGG | + | tig0020787:117199-117218 | None:intergenic | 45.0% |
| GAGCAGCGAATTGTAGATGA+TGG | + | tig0020787:117206-117225 | None:intergenic | 45.0% | |
| TATGTTACCTGTGCAGCAGA+GGG | + | tig0020787:117270-117289 | None:intergenic | 45.0% | |
| AACCCATTCAAGTGGAAGTG+AGG | + | tig0020787:117293-117312 | None:intergenic | 45.0% | |
| GGCTACATATACTGGTGTGA+TGG | + | tig0020787:117558-117577 | None:intergenic | 45.0% | |
| GGGAGTGAATGACAACCAAT+GGG | + | tig0020787:117919-117938 | None:intergenic | 45.0% | |
| TGGGAGTGAATGACAACCAA+TGG | + | tig0020787:117920-117939 | None:intergenic | 45.0% | |
| TGTTGCCTGTGTATCATCAC+TGG | - | tig0020787:118885-118904 | Msa1386240:five_prime_UTR | 45.0% | |
| GTTGCCTGTGTATCATCACT+GGG | - | tig0020787:118886-118905 | Msa1386240:five_prime_UTR | 45.0% | |
| TTGCCTGTGTATCATCACTG+GGG | - | tig0020787:118887-118906 | Msa1386240:five_prime_UTR | 45.0% | |
| TGTACTAGATGTGTTCGTGG+AGG | - | tig0020787:118940-118959 | Msa1386240:five_prime_UTR | 45.0% | |
| TAGATGTGTTCGTGGAGGAA+TGG | - | tig0020787:118945-118964 | Msa1386240:five_prime_UTR | 45.0% | |
| !! | AATGGACTAGCAGAGCCAGA+GGG | + | tig0020787:114460-114479 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGGGTTTGTTAT+TGG | + | tig0020787:114528-114547 | None:intergenic | 50.0% |
| !! | TGATTGTTGGTGGTGGTGGT+GGG | + | tig0020787:114560-114579 | None:intergenic | 50.0% |
| !! | GATGTGATTGTTGGTGGTGG+TGG | + | tig0020787:114564-114583 | None:intergenic | 50.0% |
| ! | AAGTGGGTGTAGTGTTGGGT+GGG | + | tig0020787:114609-114628 | None:intergenic | 50.0% |
| GAGGAAGTGGGTGTAGTGTT+GGG | + | tig0020787:114613-114632 | None:intergenic | 50.0% | |
| GGTTGAGGAAATGGAGGAAG+TGG | + | tig0020787:114626-114645 | None:intergenic | 50.0% | |
| ! | TGAGGTGGTGGTTGAGGAAA+TGG | + | tig0020787:114635-114654 | None:intergenic | 50.0% |
| !! | GAAGTGGGTTAGGGTTTGTG+GGG | + | tig0020787:114670-114689 | None:intergenic | 50.0% |
| !! | GGAAGTGGGTTAGGGTTTGT+GGG | + | tig0020787:114671-114690 | None:intergenic | 50.0% |
| !! | AGGAAGTGGGTTAGGGTTTG+TGG | + | tig0020787:114672-114691 | None:intergenic | 50.0% |
| !! | GGTGGTGGAGTTTGGATTTG+AGG | + | tig0020787:114692-114711 | None:intergenic | 50.0% |
| TGGAAGCCCAAGAGAAGAGA+TGG | + | tig0020787:114740-114759 | None:intergenic | 50.0% | |
| !! | GGTTGTGAGAGAAGGTGTCA+AGG | + | tig0020787:114764-114783 | None:intergenic | 50.0% |
| ACAACCACACCTCCTACGAA+TGG | - | tig0020787:114778-114797 | Msa1386240:intron | 50.0% | |
| AGTACGTGCCATCCATTCGT+AGG | + | tig0020787:114793-114812 | None:intergenic | 50.0% | |
| AGATGAAAGTGAGGAGGGTG+CGG | + | tig0020787:114845-114864 | None:intergenic | 50.0% | |
| GGTGGAGATGAAAGTGAGGA+GGG | + | tig0020787:114850-114869 | None:intergenic | 50.0% | |
| TGGTGGAGATGAAAGTGAGG+AGG | + | tig0020787:114851-114870 | None:intergenic | 50.0% | |
| !! | GGTTGGTGGAGATGAAAGTG+AGG | + | tig0020787:114854-114873 | None:intergenic | 50.0% |
| !! | ATGGCTTGAGAGCATTGGCA+GGG | + | tig0020787:114876-114895 | None:intergenic | 50.0% |
| GGTTTGTGGGCAAGAGAAGA+TGG | + | tig0020787:114895-114914 | None:intergenic | 50.0% | |
| ! | CGGAAAATGGGTTCGGTTTG+TGG | + | tig0020787:114909-114928 | None:intergenic | 50.0% |
| CCCGTCAACCAAAATCTCAC+AGG | + | tig0020787:115348-115367 | None:intergenic | 50.0% | |
| !! | GTTGACGGGCTTTGTAAGGA+AGG | - | tig0020787:115359-115378 | Msa1386240:intron | 50.0% |
| GTTGCTGGGTATAGAGGAGA+GGG | - | tig0020787:115782-115801 | Msa1386240:intron | 50.0% | |
| GGAGAGGGAAATCAAGCAGA+AGG | - | tig0020787:115797-115816 | Msa1386240:intron | 50.0% | |
| ! | CTACCCCTGGCCTTTATCAA+CGG | + | tig0020787:116407-116426 | None:intergenic | 50.0% |
| GAGACACCAAATTCTACCCC+TGG | + | tig0020787:116420-116439 | None:intergenic | 50.0% | |
| GTCACCTTACAGGCTAACCT+TGG | - | tig0020787:116832-116851 | Msa1386240:intron | 50.0% | |
| !! | AGCTCCAAGGTTAGCCTGTA+AGG | + | tig0020787:116839-116858 | None:intergenic | 50.0% |
| AGAACCATGCACAACCGATG+AGG | + | tig0020787:117235-117254 | None:intergenic | 50.0% | |
| GTATGTTACCTGTGCAGCAG+AGG | + | tig0020787:117271-117290 | None:intergenic | 50.0% | |
| AGAGGATATGGCTAGACTGC+AGG | + | tig0020787:117668-117687 | None:intergenic | 50.0% | |
| CTACCCCAGTGATGATACAC+AGG | + | tig0020787:118893-118912 | None:intergenic | 50.0% | |
| GTGTGCTTCAATCTCCTCGA+CGG | - | tig0020787:118974-118993 | Msa1386240:five_prime_UTR | 50.0% | |
| TGTGCTTCAATCTCCTCGAC+GGG | - | tig0020787:118975-118994 | Msa1386240:five_prime_UTR | 50.0% | |
| !! | GAATGGACTAGCAGAGCCAG+AGG | + | tig0020787:114461-114480 | None:intergenic | 55.0% |
| !! | GGTTGAGGATTGGTGGTGGT+GGG | + | tig0020787:114539-114558 | None:intergenic | 55.0% |
| !! | GTGATTGTTGGTGGTGGTGG+TGG | + | tig0020787:114561-114580 | None:intergenic | 55.0% |
| ! | TGTTGGGTGGGGGAAAGTGT+TGG | + | tig0020787:114597-114616 | None:intergenic | 55.0% |
| ! | AGTGGGTGTAGTGTTGGGTG+GGG | + | tig0020787:114608-114627 | None:intergenic | 55.0% |
| ! | GAAGTGGGTGTAGTGTTGGG+TGG | + | tig0020787:114610-114629 | None:intergenic | 55.0% |
| GGAGGAAGTGGGTGTAGTGT+TGG | + | tig0020787:114614-114633 | None:intergenic | 55.0% | |
| ! | GGTGGTGGTTGAGGAAATGG+AGG | + | tig0020787:114632-114651 | None:intergenic | 55.0% |
| GTTAGGGTTTGTGGGGTGAG+GGG | + | tig0020787:114663-114682 | None:intergenic | 55.0% | |
| GGTTAGGGTTTGTGGGGTGA+GGG | + | tig0020787:114664-114683 | None:intergenic | 55.0% | |
| !! | AGAAGGGTGGTGGTGGAGTT+TGG | + | tig0020787:114700-114719 | None:intergenic | 55.0% |
| AGTGGGTGAAAGAAGGGTGG+TGG | + | tig0020787:114710-114729 | None:intergenic | 55.0% | |
| CGAAGTGGGTGAAAGAAGGG+TGG | + | tig0020787:114713-114732 | None:intergenic | 55.0% | |
| !! | GTGAGAGAAGGTGTCAAGGG+TGG | + | tig0020787:114760-114779 | None:intergenic | 55.0% |
| ! | GGAGGTGTGGTTGTGAGAGA+AGG | + | tig0020787:114772-114791 | None:intergenic | 55.0% |
| CCATCCATTCGTAGGAGGTG+TGG | + | tig0020787:114785-114804 | None:intergenic | 55.0% | |
| CCACACCTCCTACGAATGGA+TGG | - | tig0020787:114782-114801 | Msa1386240:intron | 55.0% | |
| ACGTGCCATCCATTCGTAGG+AGG | + | tig0020787:114790-114809 | None:intergenic | 55.0% | |
| !! | TTGAGAGCATTGGCAGGGGT+TGG | + | tig0020787:114871-114890 | None:intergenic | 55.0% |
| !! | TGGCTTGAGAGCATTGGCAG+GGG | + | tig0020787:114875-114894 | None:intergenic | 55.0% |
| !! | GATGGCTTGAGAGCATTGGC+AGG | + | tig0020787:114877-114896 | None:intergenic | 55.0% |
| ! | CGGGCTTTGTAAGGAAGGGA+AGG | - | tig0020787:115364-115383 | Msa1386240:intron | 55.0% |
| GGTTGCTGGGTATAGAGGAG+AGG | - | tig0020787:115781-115800 | Msa1386240:intron | 55.0% | |
| ACCATGCACAACCGATGAGG+AGG | + | tig0020787:117232-117251 | None:intergenic | 55.0% | |
| GTGCTTCAATCTCCTCGACG+GGG | - | tig0020787:118976-118995 | Msa1386240:five_prime_UTR | 55.0% | |
| TAGCAGAGCCAGAGGGAGAG+AGG | + | tig0020787:114453-114472 | None:intergenic | 60.0% | |
| !! | GGGTTGAGGATTGGTGGTGG+TGG | + | tig0020787:114540-114559 | None:intergenic | 60.0% |
| !! | GGTGGGTTGAGGATTGGTGG+TGG | + | tig0020787:114543-114562 | None:intergenic | 60.0% |
| !! | GGTGGTGGGTTGAGGATTGG+TGG | + | tig0020787:114546-114565 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGGTTGAGGAT+TGG | + | tig0020787:114549-114568 | None:intergenic | 60.0% |
| !! | TTGGTGGTGGTGGTGGGTTG+AGG | + | tig0020787:114554-114573 | None:intergenic | 60.0% |
| !! | GGGTGGGGGAAAGTGTTGGA+GGG | + | tig0020787:114593-114612 | None:intergenic | 60.0% |
| !! | TGGGTGGGGGAAAGTGTTGG+AGG | + | tig0020787:114594-114613 | None:intergenic | 60.0% |
| ! | GTGGGTGTAGTGTTGGGTGG+GGG | + | tig0020787:114607-114626 | None:intergenic | 60.0% |
| GGGTTAGGGTTTGTGGGGTG+AGG | + | tig0020787:114665-114684 | None:intergenic | 60.0% | |
| ! | GGGTGAAAGAAGGGTGGTGG+TGG | + | tig0020787:114707-114726 | None:intergenic | 60.0% |
| ! | TGAAAGTGAGGAGGGTGCGG+AGG | + | tig0020787:114842-114861 | None:intergenic | 60.0% |
| !! | AGAGCATTGGCAGGGGTTGG+TGG | + | tig0020787:114868-114887 | None:intergenic | 60.0% |
| TGCACAACCGATGAGGAGGC+AGG | + | tig0020787:117228-117247 | None:intergenic | 60.0% | |
| ! | GCCTCCTCATCGGTTGTGCA+TGG | - | tig0020787:117228-117247 | Msa1386240:intron | 60.0% |
| GTTACCTGTGCAGCAGAGGG+AGG | + | tig0020787:117267-117286 | None:intergenic | 60.0% | |
| ! | GTGGGGTGAGGTGGTGGTTG+AGG | + | tig0020787:114641-114660 | None:intergenic | 65.0% |
| GGTTTGTGGGGTGAGGGGTG+GGG | + | tig0020787:114658-114677 | None:intergenic | 65.0% | |
| GGGTTTGTGGGGTGAGGGGT+GGG | + | tig0020787:114659-114678 | None:intergenic | 65.0% | |
| AGGGTTTGTGGGGTGAGGGG+TGG | + | tig0020787:114660-114679 | None:intergenic | 65.0% | |
| CGCTGCTCCTGCCTCCTCAT+CGG | - | tig0020787:117218-117237 | Msa1386240:intron | 65.0% | |
| TGAGGGGTGGGGTGAGGTGG+TGG | + | tig0020787:114647-114666 | None:intergenic | 70.0% | |
| TGCGCCTCCCTCTGCTGCAC+AGG | - | tig0020787:117260-117279 | Msa1386240:intron | 70.0% | |
| CGCTTGTGGGAACCCCGTCG+AGG | + | tig0020787:118991-119010 | None:intergenic | 70.0% | |
| GGGTGAGGGGTGGGGTGAGG+TGG | + | tig0020787:114650-114669 | None:intergenic | 75.0% | |
| GTGGGGTGAGGGGTGGGGTG+AGG | + | tig0020787:114653-114672 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020787 | gene | 114348 | 119095 | 114348 | ID=Msa1386240;Name=Msa1386240 |
| tig0020787 | mRNA | 114348 | 119095 | 114348 | ID=Msa1386240-mRNA-1;Parent=Msa1386240;Name=Msa1386240-mRNA-1;_AED=0.11;_eAED=0.19;_QI=1793|0.5|0.66|1|0.5|0.33|3|0|91 |
| tig0020787 | exon | 114348 | 114530 | 114348 | ID=Msa1386240-mRNA-1:exon:10044;Parent=Msa1386240-mRNA-1 |
| tig0020787 | exon | 116162 | 116274 | 116162 | ID=Msa1386240-mRNA-1:exon:10043;Parent=Msa1386240-mRNA-1 |
| tig0020787 | exon | 117323 | 119095 | 117323 | ID=Msa1386240-mRNA-1:exon:10042;Parent=Msa1386240-mRNA-1 |
| tig0020787 | five_prime_UTR | 117323 | 119095 | 117323 | ID=Msa1386240-mRNA-1:five_prime_utr;Parent=Msa1386240-mRNA-1 |
| tig0020787 | five_prime_UTR | 116255 | 116274 | 116255 | ID=Msa1386240-mRNA-1:five_prime_utr;Parent=Msa1386240-mRNA-1 |
| tig0020787 | CDS | 116162 | 116254 | 116162 | ID=Msa1386240-mRNA-1:cds;Parent=Msa1386240-mRNA-1 |
| tig0020787 | CDS | 114348 | 114530 | 114348 | ID=Msa1386240-mRNA-1:cds;Parent=Msa1386240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
