Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387540 | XP_013461938.1 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387540 | sp|Q9LV21|TCPD_ARATH | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387540 | A0A072V3N8 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0701890 | Msa1387540 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
| Msa0521590 | Msa1387540 | 0.998253 | 5.580152e-260 | -8.615850e-47 |
| Msa0532160 | Msa1387540 | 0.814556 | 1.450525e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387540 | MtrunA17_Chr3g0139481 | 85.150 | 532 | 22 | 5 | 1 | 532 | 1 | 475 | 0.0 | 877 |
| Msa1387540 | MtrunA17_Chr8g0392171 | 77.524 | 307 | 32 | 6 | 194 | 495 | 1 | 275 | 1.53e-159 | 455 |
| Msa1387540 | MtrunA17_Chr3g0123341 | 37.500 | 512 | 307 | 7 | 24 | 530 | 28 | 531 | 1.27e-103 | 321 |
| Msa1387540 | MtrunA17_Chr7g0272821 | 34.816 | 517 | 318 | 7 | 20 | 530 | 14 | 517 | 2.44e-89 | 284 |
| Msa1387540 | MtrunA17_Chr7g0241881 | 35.029 | 511 | 313 | 7 | 26 | 530 | 20 | 517 | 1.40e-88 | 282 |
| Msa1387540 | MtrunA17_Chr8g0380331 | 34.476 | 525 | 316 | 9 | 24 | 529 | 19 | 534 | 8.06e-85 | 273 |
| Msa1387540 | MtrunA17_Chr5g0440381 | 32.877 | 511 | 323 | 8 | 28 | 529 | 27 | 526 | 2.02e-79 | 259 |
| Msa1387540 | MtrunA17_Chr2g0282161 | 30.528 | 511 | 344 | 7 | 25 | 530 | 20 | 524 | 5.89e-73 | 242 |
| Msa1387540 | MtrunA17_Chr6g0461541 | 28.571 | 511 | 351 | 5 | 23 | 529 | 20 | 520 | 5.84e-69 | 231 |
| Msa1387540 | MtrunA17_Chr1g0160221 | 27.626 | 514 | 358 | 5 | 23 | 532 | 23 | 526 | 1.16e-68 | 230 |
| Msa1387540 | MtrunA17_Chr7g0214841 | 27.519 | 516 | 347 | 10 | 29 | 529 | 22 | 525 | 8.05e-51 | 182 |
| Msa1387540 | MtrunA17_Chr4g0027801 | 47.706 | 109 | 6 | 1 | 296 | 404 | 14 | 71 | 1.07e-18 | 81.3 |
| Msa1387540 | MtrunA17_Chr8g0392161 | 77.500 | 40 | 9 | 0 | 124 | 163 | 32 | 71 | 7.25e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387540 | AT3G18190.1 | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0.0 | 964 |
| Msa1387540 | AT1G24510.1 | 38.447 | 515 | 304 | 7 | 21 | 530 | 25 | 531 | 2.19e-104 | 323 |
| Msa1387540 | AT1G24510.3 | 37.553 | 474 | 283 | 7 | 62 | 530 | 13 | 478 | 1.84e-89 | 283 |
| Msa1387540 | AT1G24510.2 | 36.933 | 463 | 279 | 7 | 73 | 530 | 1 | 455 | 9.47e-84 | 268 |
| Msa1387540 | AT3G20050.1 | 33.898 | 531 | 323 | 9 | 18 | 529 | 13 | 534 | 9.29e-83 | 268 |
| Msa1387540 | AT5G20890.1 | 33.656 | 517 | 324 | 7 | 20 | 530 | 14 | 517 | 6.94e-82 | 265 |
| Msa1387540 | AT3G11830.1 | 32.485 | 511 | 325 | 7 | 28 | 529 | 27 | 526 | 1.78e-76 | 251 |
| Msa1387540 | AT3G11830.2 | 32.485 | 511 | 323 | 8 | 28 | 529 | 27 | 524 | 1.05e-74 | 247 |
| Msa1387540 | AT3G03960.1 | 28.817 | 524 | 357 | 7 | 14 | 532 | 17 | 529 | 1.04e-71 | 239 |
| Msa1387540 | AT5G26360.1 | 31.311 | 511 | 340 | 7 | 25 | 530 | 20 | 524 | 2.62e-71 | 238 |
| Msa1387540 | AT5G16070.1 | 29.594 | 517 | 324 | 13 | 30 | 520 | 23 | 525 | 7.05e-53 | 188 |
| Msa1387540 | AT3G02530.1 | 28.794 | 514 | 333 | 11 | 30 | 520 | 23 | 526 | 3.35e-51 | 183 |
Find 119 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGATTGTGAAGATTTC+TGG | 0.204894 | tig0020912:+58446 | Msa1387540:CDS |
| TGTGAAGATTTCTGGTATTA+AGG | 0.209465 | tig0020912:+58454 | Msa1387540:CDS |
| TCTTGCTAAAGCTAAGATTT+TGG | 0.234466 | tig0020912:+58286 | Msa1387540:CDS |
| GATTTCTGGTATTAAGGATA+TGG | 0.239423 | tig0020912:+58460 | Msa1387540:CDS |
| ATCGTCTTTGCGTTTGTTAT+CGG | 0.257624 | tig0020912:-57406 | None:intergenic |
| AGGGATGATTAAGAAGATTA+AGG | 0.275419 | tig0020912:+58190 | Msa1387540:CDS |
| GCATTCTCAGCAAGGGTATA+TGG | 0.307049 | tig0020912:-58719 | None:intergenic |
| CTTGTGGAAGAGCTTTCTCT+TGG | 0.336541 | tig0020912:+58419 | Msa1387540:CDS |
| TCACGGAGATCCACCATTTC+CGG | 0.339036 | tig0020912:-57930 | None:intergenic |
| AGCAGCGGAGTCTTGAGATT+TGG | 0.347607 | tig0020912:-57616 | None:intergenic |
| CTCTGTTCTATATCTGTCTT+AGG | 0.348731 | tig0020912:-58104 | None:intergenic |
| TGTCAAGGCAATTGGGTGCT+TGG | 0.354279 | tig0020912:+58630 | Msa1387540:CDS |
| ATCGGTGTAGGATTCGGTTT+TGG | 0.362816 | tig0020912:-57388 | None:intergenic |
| TCTCACCGCCATGGCTGTTC+CGG | 0.362983 | tig0020912:+57773 | Msa1387540:CDS |
| GATAGAGCTGTCAAGGCAAT+TGG | 0.370145 | tig0020912:+58622 | Msa1387540:CDS |
| TTGTGGAAGAGCTTTCTCTT+GGG | 0.371995 | tig0020912:+58420 | Msa1387540:CDS |
| ATGATGCTTTGTGTGTTGTT+AGG | 0.372583 | tig0020912:+58552 | Msa1387540:CDS |
| TTTGTTATCGGTGTAGGATT+CGG | 0.375261 | tig0020912:-57394 | None:intergenic |
| CATACCTTTGGGGCCGAGAC+TGG | 0.392090 | tig0020912:-57481 | None:intergenic |
| AATCTTAGCATTCTCCATTC+TGG | 0.394765 | tig0020912:-58054 | None:intergenic |
| GGAGGATCGGTGAGGGGCTG+CGG | 0.401126 | tig0020912:-57367 | None:intergenic |
| GTCAAGGCAATTGGGTGCTT+GGG | 0.415529 | tig0020912:+58631 | Msa1387540:CDS |
| CGATCCCGCTAGGCCGGAAA+TGG | 0.417675 | tig0020912:+57917 | Msa1387540:CDS |
| AGAACTGAATCAACAGCAAT+AGG | 0.421556 | tig0020912:-57885 | None:intergenic |
| AGCTCAGTAACAATTGCAAT+CGG | 0.423035 | tig0020912:-58752 | None:intergenic |
| TTTGTGTGTTGTTAGGTGTT+TGG | 0.427682 | tig0020912:+58559 | Msa1387540:CDS |
| AAATGCTCAATATTAGCAAT+AGG | 0.434996 | tig0020912:-58368 | None:intergenic |
| ATTTCTGGTATTAAGGATAT+GGG | 0.441434 | tig0020912:+58461 | Msa1387540:CDS |
| TTTGCGTTTGTTATCGGTGT+AGG | 0.444094 | tig0020912:-57400 | None:intergenic |
| TAGCACTTCGTTGAATAGTA+AGG | 0.456781 | tig0020912:+57833 | Msa1387540:CDS |
| TCACGATCAGTGAGTTCAAC+CGG | 0.461390 | tig0020912:-57792 | None:intergenic |
| AACGCCGTTCGCACCAGTCT+CGG | 0.462746 | tig0020912:+57468 | Msa1387540:CDS |
| ACCACAACTGTGCTTGTTCG+TGG | 0.463002 | tig0020912:+58488 | Msa1387540:CDS |
| TACTGAGCTTGTGAAGGGCT+TGG | 0.463815 | tig0020912:+57992 | Msa1387540:CDS |
| GTGATTATTCTCAGATGGAT+AGG | 0.464278 | tig0020912:+58138 | Msa1387540:CDS |
| CAAGACTCCGCTGCTGGTGA+TGG | 0.468281 | tig0020912:+57624 | Msa1387540:CDS |
| ATTAAGAAGATTAAGGCAAC+CGG | 0.476085 | tig0020912:+58197 | Msa1387540:CDS |
| GAATGTGGTGCAGCCATTGC+TGG | 0.481414 | tig0020912:+58853 | Msa1387540:CDS |
| GAAGAGCTTTCTCTTGGGGA+TGG | 0.486289 | tig0020912:+58425 | Msa1387540:CDS |
| TCCACCATTTCCGGCCTAGC+GGG | 0.488011 | tig0020912:-57921 | None:intergenic |
| GCAATTGGGTGCTTGGGCTA+AGG | 0.488468 | tig0020912:+58637 | Msa1387540:CDS |
| AGGCAAACAATTAAGAGTCT+TGG | 0.489277 | tig0020912:-58348 | None:intergenic |
| TGTCTCCTCCTTCTCTCTCA+TGG | 0.491398 | tig0020912:+57690 | Msa1387540:CDS |
| TGTGGAAGAGCTTTCTCTTG+GGG | 0.491536 | tig0020912:+58421 | Msa1387540:CDS |
| TATACCCTTGCTGAGAATGC+AGG | 0.493053 | tig0020912:+58722 | Msa1387540:CDS |
| CAGTCTCGGCCCCAAAGGTA+TGG | 0.493521 | tig0020912:+57482 | Msa1387540:CDS |
| AATCAACAACACATTACAAC+CGG | 0.494792 | tig0020912:-58216 | None:intergenic |
| CTGAGGAATCGTCATGCTAA+AGG | 0.500255 | tig0020912:+58773 | Msa1387540:CDS |
| AACGGCGTTAGCGACGGAAC+GGG | 0.500736 | tig0020912:-57454 | None:intergenic |
| TGTCATCGATCCCGCTAGGC+CGG | 0.501041 | tig0020912:+57911 | Msa1387540:CDS |
| TCAACACTGGAATCAATGTC+AGG | 0.507995 | tig0020912:+58801 | Msa1387540:CDS |
| AAATCTCAAGACTCCGCTGC+TGG | 0.512750 | tig0020912:+57618 | Msa1387540:CDS |
| ATAGAGCTGTCAAGGCAATT+GGG | 0.513984 | tig0020912:+58623 | Msa1387540:CDS |
| GATTGCAGGTGGTGGTGCTC+CGG | 0.514051 | tig0020912:+58598 | Msa1387540:CDS |
| TGCCTTGACAGCTCTATCTC+CGG | 0.516484 | tig0020912:-58617 | None:intergenic |
| GTTGGTGATGATAACTTCGT+TGG | 0.525584 | tig0020912:-57526 | None:intergenic |
| GGAACGGGCGGCGATGATGT+TGG | 0.529719 | tig0020912:-57439 | None:intergenic |
| TCCCGCTAGGCCGGAAATGG+TGG | 0.531201 | tig0020912:+57920 | Msa1387540:CDS |
| AAGAGCTTTCTCTTGGGGAT+GGG | 0.531234 | tig0020912:+58426 | Msa1387540:CDS |
| AACTTGCATCTTGTTGAGGA+TGG | 0.540091 | tig0020912:-57559 | None:intergenic |
| GGTTAGTGATTATTCTCAGA+TGG | 0.543811 | tig0020912:+58133 | Msa1387540:CDS |
| ACATTTCTCGAGAAGTGCTC+CGG | 0.552049 | tig0020912:-57670 | None:intergenic |
| CGGCGATGATGTTGGATTGA+CGG | 0.559941 | tig0020912:-57431 | None:intergenic |
| GATGATAACTTCGTTGGAAG+AGG | 0.560445 | tig0020912:-57520 | None:intergenic |
| CTCCGGAGATAGAGCTGTCA+AGG | 0.563162 | tig0020912:+58615 | Msa1387540:CDS |
| GAACGGCGTTAGCGACGGAA+CGG | 0.564350 | tig0020912:-57455 | None:intergenic |
| GGGGCCGAGACTGGTGCGAA+CGG | 0.565754 | tig0020912:-57472 | None:intergenic |
| AGTGAATCAGAGATAACAGT+AGG | 0.569565 | tig0020912:-57720 | None:intergenic |
| AAGGTTAGTCATGCTGCTGG+TGG | 0.570337 | tig0020912:+58026 | Msa1387540:CDS |
| GGCGATGACAACAACGGTGG+TGG | 0.571260 | tig0020912:-57649 | None:intergenic |
| CGCACCAGTCTCGGCCCCAA+AGG | 0.572245 | tig0020912:+57477 | Msa1387540:CDS |
| CCTCACACACTCTGTTGCCA+AGG | 0.573445 | tig0020912:-58894 | None:intergenic |
| TGGAACAACTTCAAGTGCCT+CGG | 0.574575 | tig0020912:-58699 | None:intergenic |
| GCTCAGTAACAATTGCAATC+GGG | 0.575791 | tig0020912:-58751 | None:intergenic |
| TCTCTGTCATCGATCCCGCT+AGG | 0.576821 | tig0020912:+57907 | Msa1387540:CDS |
| ACCACCGTTGTTGTCATCGC+CGG | 0.577312 | tig0020912:+57651 | Msa1387540:CDS |
| GAAGAACTTGCATCTTGTTG+AGG | 0.580248 | tig0020912:-57563 | None:intergenic |
| GGCGTTAGCGACGGAACGGG+CGG | 0.589560 | tig0020912:-57451 | None:intergenic |
| GTTGGGTTATGCTGATCTTG+TGG | 0.590393 | tig0020912:+58403 | Msa1387540:CDS |
| GGTGGTTCCATCACCAGCAG+CGG | 0.591723 | tig0020912:-57631 | None:intergenic |
| GAATACCATGAGAGAGAAGG+AGG | 0.591885 | tig0020912:-57695 | None:intergenic |
| GCACTTGTGCTAACCAGCAA+TGG | 0.592202 | tig0020912:-58866 | None:intergenic |
| TCAAACCTGCATTCTCAGCA+AGG | 0.593910 | tig0020912:-58727 | None:intergenic |
| GAGTTCAACCGGAACAGCCA+TGG | 0.594130 | tig0020912:-57781 | None:intergenic |
| CTGTATTCGTGCATTTGCCG+AGG | 0.594695 | tig0020912:+58682 | Msa1387540:CDS |
| GGTGCGAACGGCGTTAGCGA+CGG | 0.594895 | tig0020912:-57460 | None:intergenic |
| TGATGATACTGAGCTTGTGA+AGG | 0.595971 | tig0020912:+57986 | Msa1387540:CDS |
| TTAGCATTCTCCATTCTGGT+AGG | 0.596904 | tig0020912:-58050 | None:intergenic |
| ACACTCTGTTGCCAAGGTGA+TGG | 0.598855 | tig0020912:-58888 | None:intergenic |
| TGCTGGTGGACCTACCAGAA+TGG | 0.600235 | tig0020912:+58040 | Msa1387540:CDS |
| GCTAAAGGTGAGATCAACAC+TGG | 0.604820 | tig0020912:+58788 | Msa1387540:CDS |
| TGTTCTATATCTGTCTTAGG+AGG | 0.605667 | tig0020912:-58101 | None:intergenic |
| GGTGAATACCATGAGAGAGA+AGG | 0.606764 | tig0020912:-57698 | None:intergenic |
| GAGGATGGTAGCGCCGTCGT+TGG | 0.607730 | tig0020912:-57544 | None:intergenic |
| GATGATACTGAGCTTGTGAA+GGG | 0.610892 | tig0020912:+57987 | Msa1387540:CDS |
| TTGCAATTGTTACTGAGCTG+AGG | 0.612866 | tig0020912:+58756 | Msa1387540:CDS |
| TCCACGAACAAGCACAGTTG+TGG | 0.612984 | tig0020912:-58489 | None:intergenic |
| GCTGCACCACATTCTCCTCA+AGG | 0.613760 | tig0020912:-58844 | None:intergenic |
| TAGCACAAGTGCCATCACCT+TGG | 0.618089 | tig0020912:+58877 | Msa1387540:CDS |
| TCAAATTACAAACATCCTTG+AGG | 0.621720 | tig0020912:+58829 | Msa1387540:CDS |
| AAGAAGGTTAGTCATGCTGC+TGG | 0.624743 | tig0020912:+58023 | Msa1387540:CDS |
| ACTGGAATCAATGTCAGGAA+AGG | 0.625427 | tig0020912:+58806 | Msa1387540:CDS |
| AAACATCCTTGAGGAGAATG+TGG | 0.628033 | tig0020912:+58838 | Msa1387540:CDS |
| TCTTAACAATCTTCACATCA+CGG | 0.628490 | tig0020912:-57947 | None:intergenic |
| TGTTGATGTTCTCACCGCCA+TGG | 0.628840 | tig0020912:+57764 | Msa1387540:CDS |
| AACATCAACAGCTTTAACAG+AGG | 0.629483 | tig0020912:-57751 | None:intergenic |
| GTGAAGATTGTTAAGAAGCT+CGG | 0.630785 | tig0020912:+57954 | Msa1387540:CDS |
| TTAGGTGTTTGGTTGCCAAG+AGG | 0.631658 | tig0020912:+58570 | Msa1387540:CDS |
| ATCCACCATTTCCGGCCTAG+CGG | 0.644279 | tig0020912:-57922 | None:intergenic |
| GTGAATCAGAGATAACAGTA+GGG | 0.649997 | tig0020912:-57719 | None:intergenic |
| CCTTGGCAACAGAGTGTGTG+AGG | 0.652881 | tig0020912:+58894 | Msa1387540:CDS |
| CAAACCTGCATTCTCAGCAA+GGG | 0.653006 | tig0020912:-58726 | None:intergenic |
| AGATATAGAACAGAGTATTG+TGG | 0.666081 | tig0020912:+58112 | Msa1387540:CDS |
| GAAGTTATCATCACCAACGA+CGG | 0.680075 | tig0020912:+57531 | Msa1387540:CDS |
| TTCAACCGGAACAGCCATGG+CGG | 0.690129 | tig0020912:-57778 | None:intergenic |
| AAGATTGTTAAGAAGCTCGG+TGG | 0.695277 | tig0020912:+57957 | Msa1387540:CDS |
| TGCTCCGGCGATGACAACAA+CGG | 0.714797 | tig0020912:-57655 | None:intergenic |
| TCCGGCGATGACAACAACGG+TGG | 0.732056 | tig0020912:-57652 | None:intergenic |
| TTGATGATATTGTAACTGTG+AGG | 0.759737 | tig0020912:+58930 | Msa1387540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATGCTCAATATTAGCAAT+AGG | - | tig0020912:58371-58390 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATTAAGGATAT+GGG | + | tig0020912:58461-58480 | Msa1387540:CDS | 25.0% |
| ! | AAATGCTCAATATTAGCAAT+AGG | - | tig0020912:58371-58390 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATTAAGGATAT+GGG | + | tig0020912:58461-58480 | Msa1387540:CDS | 25.0% |
| ! | ATCATTTTGTCCATACCTTT+GGG | - | tig0020912:57495-57514 | None:intergenic | 30.0% |
| TCTTAACAATCTTCACATCA+CGG | - | tig0020912:57950-57969 | None:intergenic | 30.0% | |
| !! | AGATATAGAACAGAGTATTG+TGG | + | tig0020912:58112-58131 | Msa1387540:CDS | 30.0% |
| ! | AAGAGAGGAGTTACATTTTA+GGG | + | tig0020912:58171-58190 | Msa1387540:CDS | 30.0% |
| AGGGATGATTAAGAAGATTA+AGG | + | tig0020912:58190-58209 | Msa1387540:CDS | 30.0% | |
| ATTAAGAAGATTAAGGCAAC+CGG | + | tig0020912:58197-58216 | Msa1387540:CDS | 30.0% | |
| AATCAACAACACATTACAAC+CGG | - | tig0020912:58219-58238 | None:intergenic | 30.0% | |
| ! | TCTTGCTAAAGCTAAGATTT+TGG | + | tig0020912:58286-58305 | Msa1387540:CDS | 30.0% |
| !! | TGTGAAGATTTCTGGTATTA+AGG | + | tig0020912:58454-58473 | Msa1387540:CDS | 30.0% |
| !! | GATTTCTGGTATTAAGGATA+TGG | + | tig0020912:58460-58479 | Msa1387540:CDS | 30.0% |
| TCAAATTACAAACATCCTTG+AGG | + | tig0020912:58829-58848 | Msa1387540:CDS | 30.0% | |
| ! | TTGATGATATTGTAACTGTG+AGG | + | tig0020912:58930-58949 | Msa1387540:CDS | 30.0% |
| ! | ATCATTTTGTCCATACCTTT+GGG | - | tig0020912:57495-57514 | None:intergenic | 30.0% |
| TCTTAACAATCTTCACATCA+CGG | - | tig0020912:57950-57969 | None:intergenic | 30.0% | |
| !! | AGATATAGAACAGAGTATTG+TGG | + | tig0020912:58112-58131 | Msa1387540:CDS | 30.0% |
| ! | AAGAGAGGAGTTACATTTTA+GGG | + | tig0020912:58171-58190 | Msa1387540:CDS | 30.0% |
| AGGGATGATTAAGAAGATTA+AGG | + | tig0020912:58190-58209 | Msa1387540:CDS | 30.0% | |
| ATTAAGAAGATTAAGGCAAC+CGG | + | tig0020912:58197-58216 | Msa1387540:CDS | 30.0% | |
| AATCAACAACACATTACAAC+CGG | - | tig0020912:58219-58238 | None:intergenic | 30.0% | |
| ! | TCTTGCTAAAGCTAAGATTT+TGG | + | tig0020912:58286-58305 | Msa1387540:CDS | 30.0% |
| !! | TGTGAAGATTTCTGGTATTA+AGG | + | tig0020912:58454-58473 | Msa1387540:CDS | 30.0% |
| !! | GATTTCTGGTATTAAGGATA+TGG | + | tig0020912:58460-58479 | Msa1387540:CDS | 30.0% |
| TCAAATTACAAACATCCTTG+AGG | + | tig0020912:58829-58848 | Msa1387540:CDS | 30.0% | |
| ! | TTGATGATATTGTAACTGTG+AGG | + | tig0020912:58930-58949 | Msa1387540:CDS | 30.0% |
| ! | TTTGTTATCGGTGTAGGATT+CGG | - | tig0020912:57397-57416 | None:intergenic | 35.0% |
| !! | ATCGTCTTTGCGTTTGTTAT+CGG | - | tig0020912:57409-57428 | None:intergenic | 35.0% |
| ! | TCATTTTGTCCATACCTTTG+GGG | - | tig0020912:57494-57513 | None:intergenic | 35.0% |
| ! | GATCATTTTGTCCATACCTT+TGG | - | tig0020912:57496-57515 | None:intergenic | 35.0% |
| GTGAATCAGAGATAACAGTA+GGG | - | tig0020912:57722-57741 | None:intergenic | 35.0% | |
| AGTGAATCAGAGATAACAGT+AGG | - | tig0020912:57723-57742 | None:intergenic | 35.0% | |
| ! | AACATCAACAGCTTTAACAG+AGG | - | tig0020912:57754-57773 | None:intergenic | 35.0% |
| TAGCACTTCGTTGAATAGTA+AGG | + | tig0020912:57833-57852 | Msa1387540:CDS | 35.0% | |
| AGAACTGAATCAACAGCAAT+AGG | - | tig0020912:57888-57907 | None:intergenic | 35.0% | |
| GTGAAGATTGTTAAGAAGCT+CGG | + | tig0020912:57954-57973 | Msa1387540:CDS | 35.0% | |
| AATCTTAGCATTCTCCATTC+TGG | - | tig0020912:58057-58076 | None:intergenic | 35.0% | |
| TGTTCTATATCTGTCTTAGG+AGG | - | tig0020912:58104-58123 | None:intergenic | 35.0% | |
| CTCTGTTCTATATCTGTCTT+AGG | - | tig0020912:58107-58126 | None:intergenic | 35.0% | |
| GGTTAGTGATTATTCTCAGA+TGG | + | tig0020912:58133-58152 | Msa1387540:CDS | 35.0% | |
| GTGATTATTCTCAGATGGAT+AGG | + | tig0020912:58138-58157 | Msa1387540:CDS | 35.0% | |
| ! | TCAGATGGATAGGATTTTGA+AGG | + | tig0020912:58148-58167 | Msa1387540:CDS | 35.0% |
| !! | ATAGGATTTTGAAGGAAGAG+AGG | + | tig0020912:58156-58175 | Msa1387540:CDS | 35.0% |
| ! | GAAGAGAGGAGTTACATTTT+AGG | + | tig0020912:58170-58189 | Msa1387540:CDS | 35.0% |
| AGGCAAACAATTAAGAGTCT+TGG | - | tig0020912:58351-58370 | None:intergenic | 35.0% | |
| ! | ATGATGCTTTGTGTGTTGTT+AGG | + | tig0020912:58552-58571 | Msa1387540:CDS | 35.0% |
| ! | TTTGTGTGTTGTTAGGTGTT+TGG | + | tig0020912:58559-58578 | Msa1387540:CDS | 35.0% |
| AGCTCAGTAACAATTGCAAT+CGG | - | tig0020912:58755-58774 | None:intergenic | 35.0% | |
| ! | TTTGTTATCGGTGTAGGATT+CGG | - | tig0020912:57397-57416 | None:intergenic | 35.0% |
| !! | ATCGTCTTTGCGTTTGTTAT+CGG | - | tig0020912:57409-57428 | None:intergenic | 35.0% |
| ! | TCATTTTGTCCATACCTTTG+GGG | - | tig0020912:57494-57513 | None:intergenic | 35.0% |
| ! | GATCATTTTGTCCATACCTT+TGG | - | tig0020912:57496-57515 | None:intergenic | 35.0% |
| GTGAATCAGAGATAACAGTA+GGG | - | tig0020912:57722-57741 | None:intergenic | 35.0% | |
| AGTGAATCAGAGATAACAGT+AGG | - | tig0020912:57723-57742 | None:intergenic | 35.0% | |
| ! | AACATCAACAGCTTTAACAG+AGG | - | tig0020912:57754-57773 | None:intergenic | 35.0% |
| TAGCACTTCGTTGAATAGTA+AGG | + | tig0020912:57833-57852 | Msa1387540:CDS | 35.0% | |
| AGAACTGAATCAACAGCAAT+AGG | - | tig0020912:57888-57907 | None:intergenic | 35.0% | |
| GTGAAGATTGTTAAGAAGCT+CGG | + | tig0020912:57954-57973 | Msa1387540:CDS | 35.0% | |
| AATCTTAGCATTCTCCATTC+TGG | - | tig0020912:58057-58076 | None:intergenic | 35.0% | |
| TGTTCTATATCTGTCTTAGG+AGG | - | tig0020912:58104-58123 | None:intergenic | 35.0% | |
| CTCTGTTCTATATCTGTCTT+AGG | - | tig0020912:58107-58126 | None:intergenic | 35.0% | |
| GGTTAGTGATTATTCTCAGA+TGG | + | tig0020912:58133-58152 | Msa1387540:CDS | 35.0% | |
| GTGATTATTCTCAGATGGAT+AGG | + | tig0020912:58138-58157 | Msa1387540:CDS | 35.0% | |
| ! | TCAGATGGATAGGATTTTGA+AGG | + | tig0020912:58148-58167 | Msa1387540:CDS | 35.0% |
| !! | ATAGGATTTTGAAGGAAGAG+AGG | + | tig0020912:58156-58175 | Msa1387540:CDS | 35.0% |
| ! | GAAGAGAGGAGTTACATTTT+AGG | + | tig0020912:58170-58189 | Msa1387540:CDS | 35.0% |
| AGGCAAACAATTAAGAGTCT+TGG | - | tig0020912:58351-58370 | None:intergenic | 35.0% | |
| ! | ATGATGCTTTGTGTGTTGTT+AGG | + | tig0020912:58552-58571 | Msa1387540:CDS | 35.0% |
| ! | TTTGTGTGTTGTTAGGTGTT+TGG | + | tig0020912:58559-58578 | Msa1387540:CDS | 35.0% |
| AGCTCAGTAACAATTGCAAT+CGG | - | tig0020912:58755-58774 | None:intergenic | 35.0% | |
| !! | TTTGCGTTTGTTATCGGTGT+AGG | - | tig0020912:57403-57422 | None:intergenic | 40.0% |
| GATGATAACTTCGTTGGAAG+AGG | - | tig0020912:57523-57542 | None:intergenic | 40.0% | |
| !! | GTTGGTGATGATAACTTCGT+TGG | - | tig0020912:57529-57548 | None:intergenic | 40.0% |
| GAAGTTATCATCACCAACGA+CGG | + | tig0020912:57531-57550 | Msa1387540:CDS | 40.0% | |
| AACTTGCATCTTGTTGAGGA+TGG | - | tig0020912:57562-57581 | None:intergenic | 40.0% | |
| GAAGAACTTGCATCTTGTTG+AGG | - | tig0020912:57566-57585 | None:intergenic | 40.0% | |
| ! | GAGTTCAACGAGCATTTTAG+CGG | - | tig0020912:57595-57614 | None:intergenic | 40.0% |
| AAGATTGTTAAGAAGCTCGG+TGG | + | tig0020912:57957-57976 | Msa1387540:CDS | 40.0% | |
| TGATGATACTGAGCTTGTGA+AGG | + | tig0020912:57986-58005 | Msa1387540:CDS | 40.0% | |
| GATGATACTGAGCTTGTGAA+GGG | + | tig0020912:57987-58006 | Msa1387540:CDS | 40.0% | |
| !! | GGGCTTGGTTTTTGATAAGA+AGG | + | tig0020912:58007-58026 | Msa1387540:CDS | 40.0% |
| TTAGCATTCTCCATTCTGGT+AGG | - | tig0020912:58053-58072 | None:intergenic | 40.0% | |
| ! | CATTTTCGTGCTGAGAAGTT+GGG | + | tig0020912:58386-58405 | Msa1387540:CDS | 40.0% |
| TTGTGGAAGAGCTTTCTCTT+GGG | + | tig0020912:58420-58439 | Msa1387540:CDS | 40.0% | |
| GGGAAGATTGTGAAGATTTC+TGG | + | tig0020912:58446-58465 | Msa1387540:CDS | 40.0% | |
| ACCTGCAATCAAAAACCTCT+TGG | - | tig0020912:58588-58607 | None:intergenic | 40.0% | |
| !! | AAGAGGTTTTTGATTGCAGG+TGG | + | tig0020912:58587-58606 | Msa1387540:CDS | 40.0% |
| ATAGAGCTGTCAAGGCAATT+GGG | + | tig0020912:58623-58642 | Msa1387540:CDS | 40.0% | |
| GCTCAGTAACAATTGCAATC+GGG | - | tig0020912:58754-58773 | None:intergenic | 40.0% | |
| TTGCAATTGTTACTGAGCTG+AGG | + | tig0020912:58756-58775 | Msa1387540:CDS | 40.0% | |
| TCAACACTGGAATCAATGTC+AGG | + | tig0020912:58801-58820 | Msa1387540:CDS | 40.0% | |
| ACTGGAATCAATGTCAGGAA+AGG | + | tig0020912:58806-58825 | Msa1387540:CDS | 40.0% | |
| AAACATCCTTGAGGAGAATG+TGG | + | tig0020912:58838-58857 | Msa1387540:CDS | 40.0% | |
| !! | TTTGCGTTTGTTATCGGTGT+AGG | - | tig0020912:57403-57422 | None:intergenic | 40.0% |
| GATGATAACTTCGTTGGAAG+AGG | - | tig0020912:57523-57542 | None:intergenic | 40.0% | |
| !! | GTTGGTGATGATAACTTCGT+TGG | - | tig0020912:57529-57548 | None:intergenic | 40.0% |
| GAAGTTATCATCACCAACGA+CGG | + | tig0020912:57531-57550 | Msa1387540:CDS | 40.0% | |
| AACTTGCATCTTGTTGAGGA+TGG | - | tig0020912:57562-57581 | None:intergenic | 40.0% | |
| GAAGAACTTGCATCTTGTTG+AGG | - | tig0020912:57566-57585 | None:intergenic | 40.0% | |
| ! | GAGTTCAACGAGCATTTTAG+CGG | - | tig0020912:57595-57614 | None:intergenic | 40.0% |
| AAGATTGTTAAGAAGCTCGG+TGG | + | tig0020912:57957-57976 | Msa1387540:CDS | 40.0% | |
| TGATGATACTGAGCTTGTGA+AGG | + | tig0020912:57986-58005 | Msa1387540:CDS | 40.0% | |
| GATGATACTGAGCTTGTGAA+GGG | + | tig0020912:57987-58006 | Msa1387540:CDS | 40.0% | |
| !! | GGGCTTGGTTTTTGATAAGA+AGG | + | tig0020912:58007-58026 | Msa1387540:CDS | 40.0% |
| TTAGCATTCTCCATTCTGGT+AGG | - | tig0020912:58053-58072 | None:intergenic | 40.0% | |
| ! | CATTTTCGTGCTGAGAAGTT+GGG | + | tig0020912:58386-58405 | Msa1387540:CDS | 40.0% |
| TTGTGGAAGAGCTTTCTCTT+GGG | + | tig0020912:58420-58439 | Msa1387540:CDS | 40.0% | |
| GGGAAGATTGTGAAGATTTC+TGG | + | tig0020912:58446-58465 | Msa1387540:CDS | 40.0% | |
| ACCTGCAATCAAAAACCTCT+TGG | - | tig0020912:58588-58607 | None:intergenic | 40.0% | |
| !! | AAGAGGTTTTTGATTGCAGG+TGG | + | tig0020912:58587-58606 | Msa1387540:CDS | 40.0% |
| ATAGAGCTGTCAAGGCAATT+GGG | + | tig0020912:58623-58642 | Msa1387540:CDS | 40.0% | |
| GCTCAGTAACAATTGCAATC+GGG | - | tig0020912:58754-58773 | None:intergenic | 40.0% | |
| TTGCAATTGTTACTGAGCTG+AGG | + | tig0020912:58756-58775 | Msa1387540:CDS | 40.0% | |
| TCAACACTGGAATCAATGTC+AGG | + | tig0020912:58801-58820 | Msa1387540:CDS | 40.0% | |
| ACTGGAATCAATGTCAGGAA+AGG | + | tig0020912:58806-58825 | Msa1387540:CDS | 40.0% | |
| AAACATCCTTGAGGAGAATG+TGG | + | tig0020912:58838-58857 | Msa1387540:CDS | 40.0% | |
| !!! | AGGATTCGGTTTTGGAGGAT+CGG | - | tig0020912:57383-57402 | None:intergenic | 45.0% |
| !! | ATCGGTGTAGGATTCGGTTT+TGG | - | tig0020912:57391-57410 | None:intergenic | 45.0% |
| !! | TTCAACGAGCATTTTAGCGG+CGG | - | tig0020912:57592-57611 | None:intergenic | 45.0% |
| !! | ACATTTCTCGAGAAGTGCTC+CGG | - | tig0020912:57673-57692 | None:intergenic | 45.0% |
| GAATACCATGAGAGAGAAGG+AGG | - | tig0020912:57698-57717 | None:intergenic | 45.0% | |
| GGTGAATACCATGAGAGAGA+AGG | - | tig0020912:57701-57720 | None:intergenic | 45.0% | |
| TCACGATCAGTGAGTTCAAC+CGG | - | tig0020912:57795-57814 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTAGTCATGCTGC+TGG | + | tig0020912:58023-58042 | Msa1387540:CDS | 45.0% |
| ! | GCATTTTCGTGCTGAGAAGT+TGG | + | tig0020912:58385-58404 | Msa1387540:CDS | 45.0% |
| GTTGGGTTATGCTGATCTTG+TGG | + | tig0020912:58403-58422 | Msa1387540:CDS | 45.0% | |
| CTTGTGGAAGAGCTTTCTCT+TGG | + | tig0020912:58419-58438 | Msa1387540:CDS | 45.0% | |
| TGTGGAAGAGCTTTCTCTTG+GGG | + | tig0020912:58421-58440 | Msa1387540:CDS | 45.0% | |
| AAGAGCTTTCTCTTGGGGAT+GGG | + | tig0020912:58426-58445 | Msa1387540:CDS | 45.0% | |
| TTAGGTGTTTGGTTGCCAAG+AGG | + | tig0020912:58570-58589 | Msa1387540:CDS | 45.0% | |
| !! | GCCAAGAGGTTTTTGATTGC+AGG | + | tig0020912:58584-58603 | Msa1387540:CDS | 45.0% |
| !! | AGGTTTTTGATTGCAGGTGG+TGG | + | tig0020912:58590-58609 | Msa1387540:CDS | 45.0% |
| GATAGAGCTGTCAAGGCAAT+TGG | + | tig0020912:58622-58641 | Msa1387540:CDS | 45.0% | |
| ! | CTTGGGCTAAGGTTTTGCAT+GGG | + | tig0020912:58648-58667 | Msa1387540:CDS | 45.0% |
| ! | TAAGGTTTTGCATGGGATGG+AGG | + | tig0020912:58655-58674 | Msa1387540:CDS | 45.0% |
| ! | AAGGTTTTGCATGGGATGGA+GGG | + | tig0020912:58656-58675 | Msa1387540:CDS | 45.0% |
| TGGAACAACTTCAAGTGCCT+CGG | - | tig0020912:58702-58721 | None:intergenic | 45.0% | |
| ! | GCATTCTCAGCAAGGGTATA+TGG | - | tig0020912:58722-58741 | None:intergenic | 45.0% |
| TATACCCTTGCTGAGAATGC+AGG | + | tig0020912:58722-58741 | Msa1387540:CDS | 45.0% | |
| CAAACCTGCATTCTCAGCAA+GGG | - | tig0020912:58729-58748 | None:intergenic | 45.0% | |
| TCAAACCTGCATTCTCAGCA+AGG | - | tig0020912:58730-58749 | None:intergenic | 45.0% | |
| CTGAGGAATCGTCATGCTAA+AGG | + | tig0020912:58773-58792 | Msa1387540:CDS | 45.0% | |
| GCTAAAGGTGAGATCAACAC+TGG | + | tig0020912:58788-58807 | Msa1387540:CDS | 45.0% | |
| !!! | AGGATTCGGTTTTGGAGGAT+CGG | - | tig0020912:57383-57402 | None:intergenic | 45.0% |
| !! | ATCGGTGTAGGATTCGGTTT+TGG | - | tig0020912:57391-57410 | None:intergenic | 45.0% |
| !! | TTCAACGAGCATTTTAGCGG+CGG | - | tig0020912:57592-57611 | None:intergenic | 45.0% |
| !! | ACATTTCTCGAGAAGTGCTC+CGG | - | tig0020912:57673-57692 | None:intergenic | 45.0% |
| GAATACCATGAGAGAGAAGG+AGG | - | tig0020912:57698-57717 | None:intergenic | 45.0% | |
| GGTGAATACCATGAGAGAGA+AGG | - | tig0020912:57701-57720 | None:intergenic | 45.0% | |
| TCACGATCAGTGAGTTCAAC+CGG | - | tig0020912:57795-57814 | None:intergenic | 45.0% | |
| ! | AAGAAGGTTAGTCATGCTGC+TGG | + | tig0020912:58023-58042 | Msa1387540:CDS | 45.0% |
| ! | GCATTTTCGTGCTGAGAAGT+TGG | + | tig0020912:58385-58404 | Msa1387540:CDS | 45.0% |
| GTTGGGTTATGCTGATCTTG+TGG | + | tig0020912:58403-58422 | Msa1387540:CDS | 45.0% | |
| CTTGTGGAAGAGCTTTCTCT+TGG | + | tig0020912:58419-58438 | Msa1387540:CDS | 45.0% | |
| TGTGGAAGAGCTTTCTCTTG+GGG | + | tig0020912:58421-58440 | Msa1387540:CDS | 45.0% | |
| AAGAGCTTTCTCTTGGGGAT+GGG | + | tig0020912:58426-58445 | Msa1387540:CDS | 45.0% | |
| TTAGGTGTTTGGTTGCCAAG+AGG | + | tig0020912:58570-58589 | Msa1387540:CDS | 45.0% | |
| !! | GCCAAGAGGTTTTTGATTGC+AGG | + | tig0020912:58584-58603 | Msa1387540:CDS | 45.0% |
| !! | AGGTTTTTGATTGCAGGTGG+TGG | + | tig0020912:58590-58609 | Msa1387540:CDS | 45.0% |
| GATAGAGCTGTCAAGGCAAT+TGG | + | tig0020912:58622-58641 | Msa1387540:CDS | 45.0% | |
| ! | CTTGGGCTAAGGTTTTGCAT+GGG | + | tig0020912:58648-58667 | Msa1387540:CDS | 45.0% |
| ! | TAAGGTTTTGCATGGGATGG+AGG | + | tig0020912:58655-58674 | Msa1387540:CDS | 45.0% |
| ! | AAGGTTTTGCATGGGATGGA+GGG | + | tig0020912:58656-58675 | Msa1387540:CDS | 45.0% |
| TGGAACAACTTCAAGTGCCT+CGG | - | tig0020912:58702-58721 | None:intergenic | 45.0% | |
| ! | GCATTCTCAGCAAGGGTATA+TGG | - | tig0020912:58722-58741 | None:intergenic | 45.0% |
| TATACCCTTGCTGAGAATGC+AGG | + | tig0020912:58722-58741 | Msa1387540:CDS | 45.0% | |
| CAAACCTGCATTCTCAGCAA+GGG | - | tig0020912:58729-58748 | None:intergenic | 45.0% | |
| TCAAACCTGCATTCTCAGCA+AGG | - | tig0020912:58730-58749 | None:intergenic | 45.0% | |
| CTGAGGAATCGTCATGCTAA+AGG | + | tig0020912:58773-58792 | Msa1387540:CDS | 45.0% | |
| GCTAAAGGTGAGATCAACAC+TGG | + | tig0020912:58788-58807 | Msa1387540:CDS | 45.0% | |
| !! | GGTGTAGGATTCGGTTTTGG+AGG | - | tig0020912:57388-57407 | None:intergenic | 50.0% |
| CGGCGATGATGTTGGATTGA+CGG | - | tig0020912:57434-57453 | None:intergenic | 50.0% | |
| !! | TCAACGAGCATTTTAGCGGC+GGG | - | tig0020912:57591-57610 | None:intergenic | 50.0% |
| AGCAGCGGAGTCTTGAGATT+TGG | - | tig0020912:57619-57638 | None:intergenic | 50.0% | |
| AAATCTCAAGACTCCGCTGC+TGG | + | tig0020912:57618-57637 | Msa1387540:CDS | 50.0% | |
| TGTCTCCTCCTTCTCTCTCA+TGG | + | tig0020912:57690-57709 | Msa1387540:CDS | 50.0% | |
| TGTTGATGTTCTCACCGCCA+TGG | + | tig0020912:57764-57783 | Msa1387540:CDS | 50.0% | |
| TCACGGAGATCCACCATTTC+CGG | - | tig0020912:57933-57952 | None:intergenic | 50.0% | |
| TACTGAGCTTGTGAAGGGCT+TGG | + | tig0020912:57992-58011 | Msa1387540:CDS | 50.0% | |
| ! | AAGGTTAGTCATGCTGCTGG+TGG | + | tig0020912:58026-58045 | Msa1387540:CDS | 50.0% |
| GAAGAGCTTTCTCTTGGGGA+TGG | + | tig0020912:58425-58444 | Msa1387540:CDS | 50.0% | |
| ACCACAACTGTGCTTGTTCG+TGG | + | tig0020912:58488-58507 | Msa1387540:CDS | 50.0% | |
| TCCACGAACAAGCACAGTTG+TGG | - | tig0020912:58492-58511 | None:intergenic | 50.0% | |
| TGCCTTGACAGCTCTATCTC+CGG | - | tig0020912:58620-58639 | None:intergenic | 50.0% | |
| TGTCAAGGCAATTGGGTGCT+TGG | + | tig0020912:58630-58649 | Msa1387540:CDS | 50.0% | |
| GTCAAGGCAATTGGGTGCTT+GGG | + | tig0020912:58631-58650 | Msa1387540:CDS | 50.0% | |
| ! | GCTTGGGCTAAGGTTTTGCA+TGG | + | tig0020912:58647-58666 | Msa1387540:CDS | 50.0% |
| ! | GGCTAAGGTTTTGCATGGGA+TGG | + | tig0020912:58652-58671 | Msa1387540:CDS | 50.0% |
| CTGTATTCGTGCATTTGCCG+AGG | + | tig0020912:58682-58701 | Msa1387540:CDS | 50.0% | |
| GCACTTGTGCTAACCAGCAA+TGG | - | tig0020912:58869-58888 | None:intergenic | 50.0% | |
| TAGCACAAGTGCCATCACCT+TGG | + | tig0020912:58877-58896 | Msa1387540:CDS | 50.0% | |
| ACACTCTGTTGCCAAGGTGA+TGG | - | tig0020912:58891-58910 | None:intergenic | 50.0% | |
| !! | GGTGTAGGATTCGGTTTTGG+AGG | - | tig0020912:57388-57407 | None:intergenic | 50.0% |
| CGGCGATGATGTTGGATTGA+CGG | - | tig0020912:57434-57453 | None:intergenic | 50.0% | |
| !! | TCAACGAGCATTTTAGCGGC+GGG | - | tig0020912:57591-57610 | None:intergenic | 50.0% |
| AGCAGCGGAGTCTTGAGATT+TGG | - | tig0020912:57619-57638 | None:intergenic | 50.0% | |
| AAATCTCAAGACTCCGCTGC+TGG | + | tig0020912:57618-57637 | Msa1387540:CDS | 50.0% | |
| TGTCTCCTCCTTCTCTCTCA+TGG | + | tig0020912:57690-57709 | Msa1387540:CDS | 50.0% | |
| TGTTGATGTTCTCACCGCCA+TGG | + | tig0020912:57764-57783 | Msa1387540:CDS | 50.0% | |
| TCACGGAGATCCACCATTTC+CGG | - | tig0020912:57933-57952 | None:intergenic | 50.0% | |
| TACTGAGCTTGTGAAGGGCT+TGG | + | tig0020912:57992-58011 | Msa1387540:CDS | 50.0% | |
| ! | AAGGTTAGTCATGCTGCTGG+TGG | + | tig0020912:58026-58045 | Msa1387540:CDS | 50.0% |
| GAAGAGCTTTCTCTTGGGGA+TGG | + | tig0020912:58425-58444 | Msa1387540:CDS | 50.0% | |
| ACCACAACTGTGCTTGTTCG+TGG | + | tig0020912:58488-58507 | Msa1387540:CDS | 50.0% | |
| TCCACGAACAAGCACAGTTG+TGG | - | tig0020912:58492-58511 | None:intergenic | 50.0% | |
| TGCCTTGACAGCTCTATCTC+CGG | - | tig0020912:58620-58639 | None:intergenic | 50.0% | |
| TGTCAAGGCAATTGGGTGCT+TGG | + | tig0020912:58630-58649 | Msa1387540:CDS | 50.0% | |
| GTCAAGGCAATTGGGTGCTT+GGG | + | tig0020912:58631-58650 | Msa1387540:CDS | 50.0% | |
| ! | GCTTGGGCTAAGGTTTTGCA+TGG | + | tig0020912:58647-58666 | Msa1387540:CDS | 50.0% |
| ! | GGCTAAGGTTTTGCATGGGA+TGG | + | tig0020912:58652-58671 | Msa1387540:CDS | 50.0% |
| CTGTATTCGTGCATTTGCCG+AGG | + | tig0020912:58682-58701 | Msa1387540:CDS | 50.0% | |
| GCACTTGTGCTAACCAGCAA+TGG | - | tig0020912:58869-58888 | None:intergenic | 50.0% | |
| TAGCACAAGTGCCATCACCT+TGG | + | tig0020912:58877-58896 | Msa1387540:CDS | 50.0% | |
| ACACTCTGTTGCCAAGGTGA+TGG | - | tig0020912:58891-58910 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGAGGATCGGTGAG+GGG | - | tig0020912:57376-57395 | None:intergenic | 55.0% |
| !!! | CGGTTTTGGAGGATCGGTGA+GGG | - | tig0020912:57377-57396 | None:intergenic | 55.0% |
| !!! | TCGGTTTTGGAGGATCGGTG+AGG | - | tig0020912:57378-57397 | None:intergenic | 55.0% |
| ACCACCGTTGTTGTCATCGC+CGG | + | tig0020912:57651-57670 | Msa1387540:CDS | 55.0% | |
| TGCTCCGGCGATGACAACAA+CGG | - | tig0020912:57658-57677 | None:intergenic | 55.0% | |
| TTCAACCGGAACAGCCATGG+CGG | - | tig0020912:57781-57800 | None:intergenic | 55.0% | |
| GAGTTCAACCGGAACAGCCA+TGG | - | tig0020912:57784-57803 | None:intergenic | 55.0% | |
| TCTCTGTCATCGATCCCGCT+AGG | + | tig0020912:57907-57926 | Msa1387540:CDS | 55.0% | |
| ATCCACCATTTCCGGCCTAG+CGG | - | tig0020912:57925-57944 | None:intergenic | 55.0% | |
| ! | TGCTGGTGGACCTACCAGAA+TGG | + | tig0020912:58040-58059 | Msa1387540:CDS | 55.0% |
| CTCCGGAGATAGAGCTGTCA+AGG | + | tig0020912:58615-58634 | Msa1387540:CDS | 55.0% | |
| GCAATTGGGTGCTTGGGCTA+AGG | + | tig0020912:58637-58656 | Msa1387540:CDS | 55.0% | |
| GCTGCACCACATTCTCCTCA+AGG | - | tig0020912:58847-58866 | None:intergenic | 55.0% | |
| GAATGTGGTGCAGCCATTGC+TGG | + | tig0020912:58853-58872 | Msa1387540:CDS | 55.0% | |
| CCTCACACACTCTGTTGCCA+AGG | - | tig0020912:58897-58916 | None:intergenic | 55.0% | |
| CCTTGGCAACAGAGTGTGTG+AGG | + | tig0020912:58894-58913 | Msa1387540:CDS | 55.0% | |
| !!! | GGTTTTGGAGGATCGGTGAG+GGG | - | tig0020912:57376-57395 | None:intergenic | 55.0% |
| !!! | CGGTTTTGGAGGATCGGTGA+GGG | - | tig0020912:57377-57396 | None:intergenic | 55.0% |
| !!! | TCGGTTTTGGAGGATCGGTG+AGG | - | tig0020912:57378-57397 | None:intergenic | 55.0% |
| ACCACCGTTGTTGTCATCGC+CGG | + | tig0020912:57651-57670 | Msa1387540:CDS | 55.0% | |
| TGCTCCGGCGATGACAACAA+CGG | - | tig0020912:57658-57677 | None:intergenic | 55.0% | |
| TTCAACCGGAACAGCCATGG+CGG | - | tig0020912:57781-57800 | None:intergenic | 55.0% | |
| GAGTTCAACCGGAACAGCCA+TGG | - | tig0020912:57784-57803 | None:intergenic | 55.0% | |
| TCTCTGTCATCGATCCCGCT+AGG | + | tig0020912:57907-57926 | Msa1387540:CDS | 55.0% | |
| ATCCACCATTTCCGGCCTAG+CGG | - | tig0020912:57925-57944 | None:intergenic | 55.0% | |
| ! | TGCTGGTGGACCTACCAGAA+TGG | + | tig0020912:58040-58059 | Msa1387540:CDS | 55.0% |
| CTCCGGAGATAGAGCTGTCA+AGG | + | tig0020912:58615-58634 | Msa1387540:CDS | 55.0% | |
| GCAATTGGGTGCTTGGGCTA+AGG | + | tig0020912:58637-58656 | Msa1387540:CDS | 55.0% | |
| GCTGCACCACATTCTCCTCA+AGG | - | tig0020912:58847-58866 | None:intergenic | 55.0% | |
| GAATGTGGTGCAGCCATTGC+TGG | + | tig0020912:58853-58872 | Msa1387540:CDS | 55.0% | |
| CCTCACACACTCTGTTGCCA+AGG | - | tig0020912:58897-58916 | None:intergenic | 55.0% | |
| CCTTGGCAACAGAGTGTGTG+AGG | + | tig0020912:58894-58913 | Msa1387540:CDS | 55.0% | |
| AACGGCGTTAGCGACGGAAC+GGG | - | tig0020912:57457-57476 | None:intergenic | 60.0% | |
| GAACGGCGTTAGCGACGGAA+CGG | - | tig0020912:57458-57477 | None:intergenic | 60.0% | |
| AACGCCGTTCGCACCAGTCT+CGG | + | tig0020912:57468-57487 | Msa1387540:CDS | 60.0% | |
| !! | CATACCTTTGGGGCCGAGAC+TGG | - | tig0020912:57484-57503 | None:intergenic | 60.0% |
| CAGTCTCGGCCCCAAAGGTA+TGG | + | tig0020912:57482-57501 | Msa1387540:CDS | 60.0% | |
| CAAGACTCCGCTGCTGGTGA+TGG | + | tig0020912:57624-57643 | Msa1387540:CDS | 60.0% | |
| GGTGGTTCCATCACCAGCAG+CGG | - | tig0020912:57634-57653 | None:intergenic | 60.0% | |
| GGCGATGACAACAACGGTGG+TGG | - | tig0020912:57652-57671 | None:intergenic | 60.0% | |
| TCCGGCGATGACAACAACGG+TGG | - | tig0020912:57655-57674 | None:intergenic | 60.0% | |
| TCTCACCGCCATGGCTGTTC+CGG | + | tig0020912:57773-57792 | Msa1387540:CDS | 60.0% | |
| TGTCATCGATCCCGCTAGGC+CGG | + | tig0020912:57911-57930 | Msa1387540:CDS | 60.0% | |
| TCCACCATTTCCGGCCTAGC+GGG | - | tig0020912:57924-57943 | None:intergenic | 60.0% | |
| ! | GATTGCAGGTGGTGGTGCTC+CGG | + | tig0020912:58598-58617 | Msa1387540:CDS | 60.0% |
| AACGGCGTTAGCGACGGAAC+GGG | - | tig0020912:57457-57476 | None:intergenic | 60.0% | |
| GAACGGCGTTAGCGACGGAA+CGG | - | tig0020912:57458-57477 | None:intergenic | 60.0% | |
| AACGCCGTTCGCACCAGTCT+CGG | + | tig0020912:57468-57487 | Msa1387540:CDS | 60.0% | |
| !! | CATACCTTTGGGGCCGAGAC+TGG | - | tig0020912:57484-57503 | None:intergenic | 60.0% |
| CAGTCTCGGCCCCAAAGGTA+TGG | + | tig0020912:57482-57501 | Msa1387540:CDS | 60.0% | |
| CAAGACTCCGCTGCTGGTGA+TGG | + | tig0020912:57624-57643 | Msa1387540:CDS | 60.0% | |
| GGTGGTTCCATCACCAGCAG+CGG | - | tig0020912:57634-57653 | None:intergenic | 60.0% | |
| GGCGATGACAACAACGGTGG+TGG | - | tig0020912:57652-57671 | None:intergenic | 60.0% | |
| TCCGGCGATGACAACAACGG+TGG | - | tig0020912:57655-57674 | None:intergenic | 60.0% | |
| TCTCACCGCCATGGCTGTTC+CGG | + | tig0020912:57773-57792 | Msa1387540:CDS | 60.0% | |
| TGTCATCGATCCCGCTAGGC+CGG | + | tig0020912:57911-57930 | Msa1387540:CDS | 60.0% | |
| TCCACCATTTCCGGCCTAGC+GGG | - | tig0020912:57924-57943 | None:intergenic | 60.0% | |
| ! | GATTGCAGGTGGTGGTGCTC+CGG | + | tig0020912:58598-58617 | Msa1387540:CDS | 60.0% |
| GGAACGGGCGGCGATGATGT+TGG | - | tig0020912:57442-57461 | None:intergenic | 65.0% | |
| GGTGCGAACGGCGTTAGCGA+CGG | - | tig0020912:57463-57482 | None:intergenic | 65.0% | |
| ! | GAGGATGGTAGCGCCGTCGT+TGG | - | tig0020912:57547-57566 | None:intergenic | 65.0% |
| CGATCCCGCTAGGCCGGAAA+TGG | + | tig0020912:57917-57936 | Msa1387540:CDS | 65.0% | |
| TCCCGCTAGGCCGGAAATGG+TGG | + | tig0020912:57920-57939 | Msa1387540:CDS | 65.0% | |
| GGAACGGGCGGCGATGATGT+TGG | - | tig0020912:57442-57461 | None:intergenic | 65.0% | |
| GGTGCGAACGGCGTTAGCGA+CGG | - | tig0020912:57463-57482 | None:intergenic | 65.0% | |
| ! | GAGGATGGTAGCGCCGTCGT+TGG | - | tig0020912:57547-57566 | None:intergenic | 65.0% |
| CGATCCCGCTAGGCCGGAAA+TGG | + | tig0020912:57917-57936 | Msa1387540:CDS | 65.0% | |
| TCCCGCTAGGCCGGAAATGG+TGG | + | tig0020912:57920-57939 | Msa1387540:CDS | 65.0% | |
| GGAGGATCGGTGAGGGGCTG+CGG | - | tig0020912:57370-57389 | None:intergenic | 70.0% | |
| GGCGTTAGCGACGGAACGGG+CGG | - | tig0020912:57454-57473 | None:intergenic | 70.0% | |
| GGGGCCGAGACTGGTGCGAA+CGG | - | tig0020912:57475-57494 | None:intergenic | 70.0% | |
| CGCACCAGTCTCGGCCCCAA+AGG | + | tig0020912:57477-57496 | Msa1387540:CDS | 70.0% | |
| GGAGGATCGGTGAGGGGCTG+CGG | - | tig0020912:57370-57389 | None:intergenic | 70.0% | |
| GGCGTTAGCGACGGAACGGG+CGG | - | tig0020912:57454-57473 | None:intergenic | 70.0% | |
| GGGGCCGAGACTGGTGCGAA+CGG | - | tig0020912:57475-57494 | None:intergenic | 70.0% | |
| CGCACCAGTCTCGGCCCCAA+AGG | + | tig0020912:57477-57496 | Msa1387540:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020912 | gene | 57357 | 58955 | 57357 | ID=Msa1387540;Name=Msa1387540 |
| tig0020912 | mRNA | 57357 | 58955 | 57357 | ID=Msa1387540-mRNA-1;Parent=Msa1387540;Name=Msa1387540-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|532 |
| tig0020912 | exon | 57357 | 58955 | 57357 | ID=Msa1387540-mRNA-1:exon:10654;Parent=Msa1387540-mRNA-1 |
| tig0020912 | CDS | 57357 | 58955 | 57357 | ID=Msa1387540-mRNA-1:cds;Parent=Msa1387540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
