Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701890 | XP_003629912.1 | 99.816 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1097 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701890 | sp|P28769|TCPA_ARATH | 90.625 | 544 | 51 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1006 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701890 | G7L831 | 99.816 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1097 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019830 | Msa0701890 | 0.800931 | 1.143022e-48 | -8.615850e-47 |
| Msa0020540 | Msa0701890 | 0.803333 | 3.665171e-49 | -8.615850e-47 |
| Msa0021290 | Msa0701890 | 0.809741 | 1.628488e-50 | -8.615850e-47 |
| Msa0021320 | Msa0701890 | 0.819832 | 9.440553e-53 | -8.615850e-47 |
| Msa0080370 | Msa0701890 | 0.810511 | 1.111605e-50 | -8.615850e-47 |
| Msa0098410 | Msa0701890 | 0.815193 | 1.048148e-51 | -8.615850e-47 |
| Msa0605530 | Msa0701890 | 0.829953 | 3.856876e-55 | -8.615850e-47 |
| Msa0607800 | Msa0701890 | 0.803007 | 4.281718e-49 | -8.615850e-47 |
| Msa0642550 | Msa0701890 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0643680 | Msa0701890 | 0.833636 | 4.759628e-56 | -8.615850e-47 |
| Msa0648040 | Msa0701890 | 0.823869 | 1.097917e-53 | -8.615850e-47 |
| Msa0681050 | Msa0701890 | 0.816735 | 4.744022e-52 | -8.615850e-47 |
| Msa0687370 | Msa0701890 | 0.811094 | 8.313425e-51 | -8.615850e-47 |
| Msa0689830 | Msa0701890 | 0.819920 | 9.014094e-53 | -8.615850e-47 |
| Msa0690740 | Msa0701890 | 0.832863 | 7.416446e-56 | -8.615850e-47 |
| Msa0695760 | Msa0701890 | 0.827608 | 1.424149e-54 | -8.615850e-47 |
| Msa0701890 | Msa0747740 | 0.802736 | 4.870899e-49 | -8.615850e-47 |
| Msa0701890 | Msa0769700 | 0.811275 | 7.593499e-51 | -8.615850e-47 |
| Msa0701890 | Msa0926310 | 0.840937 | 6.435555e-58 | -8.615850e-47 |
| Msa0701890 | Msa0958250 | 0.806001 | 1.016721e-49 | -8.615850e-47 |
| Msa0701890 | Msa0989370 | 0.808447 | 3.082796e-50 | -8.615850e-47 |
| Msa0701890 | Msa1000780 | 0.825312 | 5.020269e-54 | -8.615850e-47 |
| Msa0701890 | Msa1019200 | 0.855533 | 5.920089e-62 | -8.615850e-47 |
| Msa0701890 | Msa1027390 | 0.805717 | 1.166515e-49 | -8.615850e-47 |
| Msa0701890 | Msa1029980 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0701890 | Msa1050260 | 0.855601 | 5.655851e-62 | -8.615850e-47 |
| Msa0701890 | Msa1091290 | 0.861422 | 1.037556e-63 | -8.615850e-47 |
| Msa0701890 | Msa1096760 | 0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa0701890 | Msa1104110 | 0.842536 | 2.435001e-58 | -8.615850e-47 |
| Msa0701890 | Msa1140410 | 0.833451 | 5.294310e-56 | -8.615850e-47 |
| Msa0701890 | Msa1147700 | 0.856948 | 2.276935e-62 | -8.615850e-47 |
| Msa0701890 | Msa1163180 | 0.809696 | 1.665736e-50 | -8.615850e-47 |
| Msa0701890 | Msa1183740 | 0.804470 | 2.127284e-49 | -8.615850e-47 |
| Msa0701890 | Msa1201780 | 0.814914 | 1.208473e-51 | -8.615850e-47 |
| Msa0701890 | Msa1213830 | 0.802878 | 4.552173e-49 | -8.615850e-47 |
| Msa0701890 | Msa1218610 | 0.823277 | 1.510608e-53 | -8.615850e-47 |
| Msa0701890 | Msa1218820 | 0.816828 | 4.521604e-52 | -8.615850e-47 |
| Msa0701890 | Msa1226370 | 0.816048 | 6.760253e-52 | -8.615850e-47 |
| Msa0701890 | Msa1268540 | 0.807971 | 3.894918e-50 | -8.615850e-47 |
| Msa0701890 | Msa1294790 | 0.808617 | 2.836805e-50 | -8.615850e-47 |
| Msa0701890 | Msa1332950 | 0.810851 | 9.384677e-51 | -8.615850e-47 |
| Msa0701890 | Msa1365820 | 0.811194 | 7.910577e-51 | -8.615850e-47 |
| Msa0701890 | Msa1387540 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
| Msa0701890 | Msa1393850 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa0701890 | Msa1399190 | 0.826952 | 2.045131e-54 | -8.615850e-47 |
| Msa0701890 | Msa1402010 | 0.836390 | 9.623142e-57 | -8.615850e-47 |
| Msa0701890 | Msa1426320 | 0.802281 | 6.043163e-49 | -8.615850e-47 |
| Msa0701890 | Msa1435110 | 0.834671 | 2.619079e-56 | -8.615850e-47 |
| Msa0701890 | Msa1451040 | 0.808446 | 3.085423e-50 | -8.615850e-47 |
| Msa0701890 | Msa1459010 | 0.816869 | 4.427720e-52 | -8.615850e-47 |
| Msa0158410 | Msa0701890 | 0.804397 | 2.202792e-49 | -8.615850e-47 |
| Msa0173250 | Msa0701890 | 0.830946 | 2.205594e-55 | -8.615850e-47 |
| Msa0192050 | Msa0701890 | 0.841395 | 4.876282e-58 | -8.615850e-47 |
| Msa0388250 | Msa0701890 | 0.833507 | 5.124713e-56 | -8.615850e-47 |
| Msa0413170 | Msa0701890 | 0.835054 | 2.097726e-56 | -8.615850e-47 |
| Msa0421750 | Msa0701890 | 0.816985 | 4.169899e-52 | -8.615850e-47 |
| Msa0422820 | Msa0701890 | 0.806204 | 9.215605e-50 | -8.615850e-47 |
| Msa0428210 | Msa0701890 | 0.823928 | 1.063575e-53 | -8.615850e-47 |
| Msa0430230 | Msa0701890 | 0.820202 | 7.767231e-53 | -8.615850e-47 |
| Msa0454560 | Msa0701890 | 0.802595 | 5.208131e-49 | -8.615850e-47 |
| Msa0458100 | Msa0701890 | 0.803616 | 3.201898e-49 | -8.615850e-47 |
| Msa0477570 | Msa0701890 | 0.817840 | 2.676789e-52 | -8.615850e-47 |
| Msa0312740 | Msa0701890 | 0.830179 | 3.398133e-55 | -8.615850e-47 |
| Msa0513620 | Msa0701890 | 0.804400 | 2.199528e-49 | -8.615850e-47 |
| Msa0514020 | Msa0701890 | 0.813252 | 2.812587e-51 | -8.615850e-47 |
| Msa0515610 | Msa0701890 | 0.827524 | 1.491747e-54 | -8.615850e-47 |
| Msa0518590 | Msa0701890 | 0.848641 | 5.386678e-60 | -8.615850e-47 |
| Msa0521530 | Msa0701890 | 0.807574 | 4.729523e-50 | -8.615850e-47 |
| Msa0521590 | Msa0701890 | 0.813435 | 2.562964e-51 | -8.615850e-47 |
| Msa0525880 | Msa0701890 | 0.837206 | 5.958294e-57 | -8.615850e-47 |
| Msa0532050 | Msa0701890 | 0.838653 | 2.529968e-57 | -8.615850e-47 |
| Msa0532160 | Msa0701890 | 0.988023 | 2.032065e-172 | -8.615850e-47 |
| Msa0545920 | Msa0701890 | 0.817417 | 3.334509e-52 | -8.615850e-47 |
| Msa0567610 | Msa0701890 | 0.807021 | 6.194864e-50 | -8.615850e-47 |
| Msa0572830 | Msa0701890 | 0.809763 | 1.611475e-50 | -8.615850e-47 |
| Msa0601720 | Msa0701890 | 0.820701 | 5.968013e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701890 | MtrunA17_Chr8g0380331 | 99.816 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1097 |
| Msa0701890 | MtrunA17_Chr5g0440381 | 37.665 | 531 | 305 | 8 | 17 | 540 | 21 | 532 | 2.25e-110 | 340 |
| Msa0701890 | MtrunA17_Chr8g0338121 | 89.888 | 178 | 14 | 1 | 199 | 376 | 13 | 186 | 3.10e-105 | 317 |
| Msa0701890 | MtrunA17_Chr7g0272821 | 35.120 | 541 | 319 | 10 | 1 | 534 | 1 | 516 | 1.16e-91 | 290 |
| Msa0701890 | MtrunA17_Chr7g0241881 | 35.104 | 527 | 311 | 9 | 15 | 534 | 14 | 516 | 2.32e-90 | 287 |
| Msa0701890 | MtrunA17_Chr3g0123341 | 32.707 | 532 | 329 | 10 | 11 | 534 | 20 | 530 | 7.01e-73 | 241 |
| Msa0701890 | MtrunA17_Chr2g0282161 | 30.697 | 531 | 347 | 8 | 13 | 538 | 13 | 527 | 2.26e-71 | 238 |
| Msa0701890 | MtrunA17_Chr1g0160221 | 30.174 | 517 | 335 | 9 | 23 | 534 | 28 | 523 | 1.68e-66 | 224 |
| Msa0701890 | MtrunA17_Chr3g0139481 | 31.309 | 527 | 273 | 10 | 19 | 534 | 24 | 472 | 4.50e-64 | 216 |
| Msa0701890 | MtrunA17_Chr6g0461541 | 29.400 | 517 | 339 | 9 | 23 | 534 | 25 | 520 | 3.52e-63 | 216 |
| Msa0701890 | MtrunA17_Chr7g0214841 | 26.857 | 525 | 351 | 8 | 24 | 535 | 22 | 526 | 3.55e-56 | 197 |
| Msa0701890 | MtrunA17_Chr8g0338111 | 87.500 | 72 | 3 | 1 | 77 | 148 | 4 | 69 | 1.04e-32 | 119 |
| Msa0701890 | MtrunA17_Chr8g0392171 | 27.931 | 290 | 145 | 7 | 225 | 500 | 36 | 275 | 8.02e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701890 | AT3G20050.1 | 90.625 | 544 | 51 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1006 |
| Msa0701890 | AT3G11830.1 | 37.023 | 524 | 304 | 6 | 24 | 540 | 28 | 532 | 1.31e-103 | 323 |
| Msa0701890 | AT3G11830.2 | 37.023 | 524 | 302 | 7 | 24 | 540 | 28 | 530 | 2.67e-102 | 319 |
| Msa0701890 | AT3G18190.1 | 35.606 | 528 | 308 | 11 | 18 | 534 | 27 | 533 | 2.20e-88 | 282 |
| Msa0701890 | AT5G20890.1 | 34.594 | 529 | 311 | 11 | 15 | 534 | 14 | 516 | 1.66e-82 | 267 |
| Msa0701890 | AT1G24510.1 | 32.197 | 528 | 331 | 7 | 14 | 534 | 23 | 530 | 3.21e-73 | 243 |
| Msa0701890 | AT5G26360.1 | 30.624 | 529 | 350 | 6 | 13 | 538 | 13 | 527 | 9.45e-72 | 239 |
| Msa0701890 | AT3G03960.1 | 29.594 | 517 | 338 | 9 | 23 | 534 | 31 | 526 | 2.43e-64 | 219 |
| Msa0701890 | AT3G02530.1 | 28.681 | 523 | 338 | 9 | 27 | 535 | 25 | 526 | 3.92e-61 | 211 |
| Msa0701890 | AT5G16070.1 | 28.269 | 520 | 343 | 8 | 27 | 535 | 25 | 525 | 8.01e-60 | 207 |
| Msa0701890 | AT1G24510.3 | 30.247 | 486 | 312 | 7 | 56 | 534 | 12 | 477 | 2.09e-58 | 202 |
| Msa0701890 | AT1G24510.2 | 29.536 | 474 | 307 | 7 | 68 | 534 | 1 | 454 | 5.71e-53 | 187 |
| Msa0701890 | AT5G56500.2 | 22.939 | 558 | 329 | 20 | 31 | 539 | 74 | 579 | 1.28e-11 | 67.8 |
| Msa0701890 | AT5G56500.1 | 22.939 | 558 | 329 | 20 | 31 | 539 | 74 | 579 | 1.28e-11 | 67.8 |
Find 142 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGCATTATCAGTTTATT+TGG | 0.153089 | 4_4:-73321156 | Msa0701890:CDS |
| CAGTGATTTCTTTGCTAATT+TGG | 0.196704 | 4_4:-73326825 | Msa0701890:intron |
| ATTAGTTGTGGTTTGGAATT+TGG | 0.217076 | 4_4:-73319496 | Msa0701890:three_prime_UTR |
| GAATACCTTGCTACAACTTT+AGG | 0.217589 | 4_4:-73321134 | Msa0701890:CDS |
| CTGCCCAAGGAATGCCTCTT+AGG | 0.219812 | 4_4:-73325149 | Msa0701890:CDS |
| TCAAACAAATTTCAAGAGTT+TGG | 0.239620 | 4_4:-73319469 | Msa0701890:three_prime_UTR |
| TTATTTCTTTATTACAAGTT+TGG | 0.288614 | 4_4:-73319802 | Msa0701890:three_prime_UTR |
| GATGCTGTAATCATGATTAA+AGG | 0.288628 | 4_4:-73323256 | Msa0701890:CDS |
| ATTCTACTACCAACCTTGAT+TGG | 0.298920 | 4_4:+73325415 | None:intergenic |
| GGTTGAACTTGCTGAACTTC+AGG | 0.305715 | 4_4:-73328007 | Msa0701890:CDS |
| GGTCTCAACATTTGCTGATA+TGG | 0.306308 | 4_4:-73323350 | Msa0701890:CDS |
| CTATCTTTCCAGTACGGGTT+TGG | 0.307511 | 4_4:-73320239 | Msa0701890:intron |
| ACTTACTGCACTTGAAGTTT+TGG | 0.311156 | 4_4:+73323231 | None:intergenic |
| GCTATATTTATTACCCTTGA+TGG | 0.337472 | 4_4:-73319868 | Msa0701890:three_prime_UTR |
| ATGATTTACATGCCTTTCTA+AGG | 0.338184 | 4_4:-73319692 | Msa0701890:three_prime_UTR |
| ACATTGCGAAGTGAGTTTCT+AGG | 0.339918 | 4_4:+73328530 | None:intergenic |
| GAGCAAAGTCAAAATTATTC+AGG | 0.342350 | 4_4:-73320158 | Msa0701890:intron |
| CAATGTTGCACCGGTTGCTT+TGG | 0.351517 | 4_4:+73323864 | None:intergenic |
| TACTTGCTAGTTCTTGTGTA+AGG | 0.351534 | 4_4:-73319934 | Msa0701890:three_prime_UTR |
| CTTTGAGGACATGCTGGTCT+TGG | 0.352985 | 4_4:+73326862 | None:intergenic |
| CAGTTGGATTAGTTGTGGTT+TGG | 0.357468 | 4_4:-73319503 | Msa0701890:three_prime_UTR |
| TTTATTACCCTTGATGGTCT+TGG | 0.358081 | 4_4:-73319862 | Msa0701890:three_prime_UTR |
| CAGACCTGGTTGCAAAATTA+CGG | 0.362511 | 4_4:-73320680 | Msa0701890:CDS |
| AATTGATGACATGGCGCTTA+AGG | 0.368284 | 4_4:-73324642 | Msa0701890:intron |
| AATGGTTATGCTCTTAATAC+TGG | 0.369065 | 4_4:-73325177 | Msa0701890:CDS |
| CTAAGGCAGCGTTTGGTTTG+TGG | 0.374452 | 4_4:-73319675 | Msa0701890:three_prime_UTR |
| TGCCTTTCTAAGGCAGCGTT+TGG | 0.376892 | 4_4:-73319682 | Msa0701890:three_prime_UTR |
| GTGTAAGGGAGGGCGTTTCC+AGG | 0.381612 | 4_4:-73319919 | Msa0701890:three_prime_UTR |
| AACCAGGTCTGTGGCATCCT+TGG | 0.385392 | 4_4:+73320692 | None:intergenic |
| CAGATGCTTGTTGATGATAT+CGG | 0.399758 | 4_4:-73328191 | Msa0701890:CDS |
| TTTCAGTACTTTGTTGAGGC+TGG | 0.410605 | 4_4:-73323934 | Msa0701890:intron |
| TAATAAGACTAACACTTTGA+TGG | 0.421809 | 4_4:+73319424 | None:intergenic |
| TTCTACTACCAACCTTGATT+GGG | 0.427473 | 4_4:+73325416 | None:intergenic |
| AGACCTGGTTGCAAAATTAC+GGG | 0.430922 | 4_4:-73320679 | Msa0701890:CDS |
| CGATATGATCAAGCTTGTTA+AGG | 0.431683 | 4_4:-73320002 | Msa0701890:CDS |
| ATTCAGGTGGTGGCTGGTGG+AGG | 0.433679 | 4_4:-73321188 | Msa0701890:intron |
| CTTGAGAAATCTTACCTTGA+CGG | 0.434983 | 4_4:+73327591 | None:intergenic |
| AGAGAGCTAATGATCTTGTT+AGG | 0.440419 | 4_4:-73327820 | Msa0701890:CDS |
| TGCGGACGTCTTGGCCGGAT+TGG | 0.445829 | 4_4:+73328470 | None:intergenic |
| AACACATACACATAACATAA+AGG | 0.450515 | 4_4:-73328642 | None:intergenic |
| CATTGCGAAGTGAGTTTCTA+GGG | 0.450633 | 4_4:+73328531 | None:intergenic |
| CGTCATGTTGCCAAAGCAAC+CGG | 0.451920 | 4_4:-73323874 | Msa0701890:CDS |
| AATGTTGTTCTGACTACTAA+AGG | 0.453936 | 4_4:-73324665 | Msa0701890:CDS |
| CACTTGTAGGTTGAGAAGCT+TGG | 0.454077 | 4_4:-73326908 | Msa0701890:intron |
| GAACTTCAGGATAGAGAAGT+TGG | 0.456067 | 4_4:-73327994 | Msa0701890:CDS |
| AAGTATTAGTTTCTGATCCC+AGG | 0.456823 | 4_4:-73325059 | Msa0701890:CDS |
| ATGCTGTAATCATGATTAAA+GGG | 0.460572 | 4_4:-73323255 | Msa0701890:CDS |
| TGTAAAGATGACTAACCAAC+GGG | 0.463714 | 4_4:-73325452 | Msa0701890:CDS |
| GTCACCAGCTATCAGCTTTG+AGG | 0.466133 | 4_4:+73326847 | None:intergenic |
| TGTTCTTGTCATGCATTGAC+TGG | 0.466342 | 4_4:-73319719 | Msa0701890:three_prime_UTR |
| TGGCGTTCGCCGGAGATGTC+AGG | 0.467083 | 4_4:+73328490 | None:intergenic |
| TTGAGTGCGGACGTCTTGGC+CGG | 0.473398 | 4_4:+73328465 | None:intergenic |
| ATCTCCGGCGAACGCCAATC+CGG | 0.474311 | 4_4:-73328484 | Msa0701890:CDS |
| TGTACCTTGTCGAGACCAAC+GGG | 0.479862 | 4_4:+73328294 | None:intergenic |
| ATACCCTAAGAGGCATTCCT+TGG | 0.482129 | 4_4:+73325145 | None:intergenic |
| ACTAGAAACAACTTGGAAGC+TGG | 0.485060 | 4_4:-73320199 | Msa0701890:CDS |
| AATTTACTAGCACAATCAGT+TGG | 0.488440 | 4_4:-73319519 | Msa0701890:three_prime_UTR |
| GTGGACAAATACACTTTGCT+TGG | 0.489271 | 4_4:+73319446 | None:intergenic |
| ATTACCCTTGATGGTCTTGG+AGG | 0.491829 | 4_4:-73319859 | Msa0701890:three_prime_UTR |
| GCTTGTTAAGGATGAAGGTC+AGG | 0.493641 | 4_4:-73319990 | Msa0701890:CDS |
| AGACGAAAAGCTTGCCGTCA+AGG | 0.498910 | 4_4:-73327605 | Msa0701890:intron |
| ATCAAGCTTGTTAAGGATGA+AGG | 0.499430 | 4_4:-73319995 | Msa0701890:CDS |
| TACACATAACATAAAGGAAA+AGG | 0.502970 | 4_4:-73328636 | None:intergenic |
| GCTTGATCATATCGTCAATC+CGG | 0.503371 | 4_4:+73320011 | None:intergenic |
| AACCAAACGCTGCCTTAGAA+AGG | 0.503578 | 4_4:+73319680 | None:intergenic |
| CTTTAGTTTGTGCAGCATAG+TGG | 0.504319 | 4_4:+73320652 | None:intergenic |
| CAATTGACAGCTCTTAAACA+TGG | 0.505923 | 4_4:+73319553 | None:intergenic |
| TGCCCAAGGAATGCCTCTTA+GGG | 0.506306 | 4_4:-73325148 | Msa0701890:CDS |
| TCAGGGAATCAATATATTGA+AGG | 0.506625 | 4_4:-73325235 | Msa0701890:intron |
| TGCTACAACTTTAGGATCGC+GGG | 0.508460 | 4_4:-73321126 | Msa0701890:CDS |
| CAAAGCAACCGGTGCAACAT+TGG | 0.508709 | 4_4:-73323863 | Msa0701890:intron |
| TCTATATCCACTGATAATTG+AGG | 0.510888 | 4_4:+73327781 | None:intergenic |
| ACTTGCTAGTTCTTGTGTAA+GGG | 0.512184 | 4_4:-73319933 | Msa0701890:three_prime_UTR |
| GTTTCCAGGCTATGTTGGTA+TGG | 0.514464 | 4_4:-73319905 | Msa0701890:three_prime_UTR |
| AAGCTGCTATTACTATTCTC+CGG | 0.516464 | 4_4:-73320030 | Msa0701890:CDS |
| TTGGCCGGATTGGCGTTCGC+CGG | 0.521185 | 4_4:+73328480 | None:intergenic |
| TGCTACTATACTTAAGATGC+TGG | 0.521772 | 4_4:-73328144 | Msa0701890:CDS |
| TACCCTAAGAGGCATTCCTT+GGG | 0.521776 | 4_4:+73325146 | None:intergenic |
| AATGCCATACCAACATAGCC+TGG | 0.523320 | 4_4:+73319901 | None:intergenic |
| TGACTACATGCTTGATGAGA+TGG | 0.525127 | 4_4:-73322371 | Msa0701890:CDS |
| ATGTAAATTCAGGTGGTGGC+TGG | 0.525195 | 4_4:-73321194 | Msa0701890:intron |
| AGTTGAACATCCCGCTGCTA+AGG | 0.529381 | 4_4:-73328120 | Msa0701890:intron |
| TGCTAGTTCTTGTGTAAGGG+AGG | 0.533805 | 4_4:-73319930 | Msa0701890:three_prime_UTR |
| AGTATTAGTTTCTGATCCCA+GGG | 0.537249 | 4_4:-73325058 | Msa0701890:CDS |
| CAGAGAGGCTGACATGACTA+AGG | 0.538129 | 4_4:-73324720 | Msa0701890:CDS |
| ATGTCCTCAAAGCTGATAGC+TGG | 0.539484 | 4_4:-73326851 | Msa0701890:CDS |
| ATCGAGAAATTACTGAAAGC+TGG | 0.540178 | 4_4:-73324692 | Msa0701890:CDS |
| AATCAAACTCCTGACATCTC+CGG | 0.541969 | 4_4:-73328499 | Msa0701890:CDS |
| GGAAAAGGAAAGAGAAAACT+AGG | 0.542893 | 4_4:-73328621 | Msa0701890:five_prime_UTR |
| TTTGCAGGGGATACCCTAAG+AGG | 0.545005 | 4_4:+73325135 | None:intergenic |
| AATTGACAGCTCTTAAACAT+GGG | 0.546308 | 4_4:+73319554 | None:intergenic |
| CAAGACGTCCGCACTCAAAA+CGG | 0.547818 | 4_4:-73328460 | Msa0701890:intron |
| TAAATTCAGGTGGTGGCTGG+TGG | 0.548875 | 4_4:-73321191 | Msa0701890:intron |
| TATCAGCTTTGAGGACATGC+TGG | 0.550203 | 4_4:+73326856 | None:intergenic |
| ACAATCAGTTGGATTAGTTG+TGG | 0.550526 | 4_4:-73319508 | Msa0701890:three_prime_UTR |
| AGGAAAGACTAGAAACAACT+TGG | 0.552501 | 4_4:-73320206 | Msa0701890:CDS |
| TTCTCCCTCCAAGACCATCA+AGG | 0.553348 | 4_4:+73319854 | None:intergenic |
| CAGATAAGAAGCATTTATCA+AGG | 0.555568 | 4_4:-73320629 | Msa0701890:intron |
| ATTAGATTAACCTTAGCAGC+GGG | 0.562482 | 4_4:+73328110 | None:intergenic |
| TCAACATTTGCTGATATGGA+AGG | 0.562540 | 4_4:-73323346 | Msa0701890:CDS |
| TTGTACCTTGTCGAGACCAA+CGG | 0.566679 | 4_4:+73328293 | None:intergenic |
| CTGGTTTCAGTACTTTGTTG+AGG | 0.569526 | 4_4:-73323938 | Msa0701890:intron |
| AACATTTGCTGATATGGAAG+GGG | 0.570131 | 4_4:-73323344 | Msa0701890:CDS |
| TGTTGGTATGGCATTTGAAG+AGG | 0.571375 | 4_4:-73319893 | Msa0701890:three_prime_UTR |
| ACGGGTTTGGATCTTTCAGA+AGG | 0.572129 | 4_4:-73320226 | Msa0701890:CDS |
| TATCCACTGATAATTGAGGT+TGG | 0.573056 | 4_4:+73327785 | None:intergenic |
| ATTTCTTGGAACTGCAGATG+AGG | 0.576660 | 4_4:-73323302 | Msa0701890:CDS |
| TTACCCTTGATGGTCTTGGA+GGG | 0.576982 | 4_4:-73319858 | Msa0701890:three_prime_UTR |
| GTCTCTGTTAATCATTCCAA+AGG | 0.580186 | 4_4:-73321075 | Msa0701890:intron |
| AATACTGGACGTGCTGCCCA+AGG | 0.580408 | 4_4:-73325162 | Msa0701890:CDS |
| CAACATTTGCTGATATGGAA+GGG | 0.582382 | 4_4:-73323345 | Msa0701890:CDS |
| TCTCCCTCCAAGACCATCAA+GGG | 0.584714 | 4_4:+73319855 | None:intergenic |
| GCTAGTTCTTGTGTAAGGGA+GGG | 0.585888 | 4_4:-73319929 | Msa0701890:three_prime_UTR |
| GGTATCTGACTTCACCCCGT+TGG | 0.587784 | 4_4:+73325437 | None:intergenic |
| GCTTGCTGTCAATGCTGCCA+AGG | 0.590241 | 4_4:-73320709 | Msa0701890:CDS |
| AGGGCGTTTCCAGGCTATGT+TGG | 0.591649 | 4_4:-73319910 | Msa0701890:three_prime_UTR |
| AACTGCAGATGAGGTTGTTG+AGG | 0.595904 | 4_4:-73323293 | Msa0701890:CDS |
| TAGGTCTCGTTAATTCTCAG+AGG | 0.599649 | 4_4:-73322400 | Msa0701890:CDS |
| AAGTATAGAGAGTGAGTCAG+TGG | 0.599754 | 4_4:-73328558 | Msa0701890:five_prime_UTR |
| AAAACCTCACTCGGTCCCGT+TGG | 0.602554 | 4_4:-73328309 | Msa0701890:CDS |
| TGAAGTCAGATACCCAATCA+AGG | 0.604042 | 4_4:-73325428 | Msa0701890:intron |
| ATTTGCTGATATGGAAGGGG+AGG | 0.604182 | 4_4:-73323341 | Msa0701890:CDS |
| TGCCAAGGATGCCACAGACC+TGG | 0.605336 | 4_4:-73320694 | Msa0701890:CDS |
| GATGTGACTATTACTAATGA+TGG | 0.618021 | 4_4:-73328167 | Msa0701890:CDS |
| AAGGCATACCAATGTTGCAC+CGG | 0.620442 | 4_4:+73323855 | None:intergenic |
| GAGACCAACGGGACCGAGTG+AGG | 0.622750 | 4_4:+73328305 | None:intergenic |
| CGGTCCCGTTGGTCTCGACA+AGG | 0.624347 | 4_4:-73328298 | Msa0701890:intron |
| AACTCGAGAAAATTCGCCAA+AGG | 0.625053 | 4_4:-73325035 | Msa0701890:intron |
| TAAGACTAACACTTTGATGG+TGG | 0.628842 | 4_4:+73319427 | None:intergenic |
| TTGCTACAACTTTAGGATCG+CGG | 0.632065 | 4_4:-73321127 | Msa0701890:CDS |
| TGGAATGATTAACAGAGACT+CGG | 0.632335 | 4_4:+73321079 | None:intergenic |
| CTGTAAAGATGACTAACCAA+CGG | 0.633990 | 4_4:-73325453 | Msa0701890:CDS |
| AATTAGATTAACCTTAGCAG+CGG | 0.635062 | 4_4:+73328109 | None:intergenic |
| CATCCAACCTCAATTATCAG+TGG | 0.640722 | 4_4:-73327788 | Msa0701890:CDS |
| TCTGCAGTTCCAAGAAATGA+CGG | 0.640766 | 4_4:+73323307 | None:intergenic |
| AACATCGTGAAAACCTCACT+CGG | 0.643474 | 4_4:-73328318 | Msa0701890:CDS |
| ATCAATATATTGAAGGCACA+TGG | 0.646632 | 4_4:-73325228 | Msa0701890:CDS |
| TACTAAAGGAATTGATGACA+TGG | 0.657873 | 4_4:-73324651 | Msa0701890:CDS |
| GCGATCCTAAAGTTGTAGCA+AGG | 0.663247 | 4_4:+73321129 | None:intergenic |
| CAGGATAGAGAAGTTGGAGA+CGG | 0.685651 | 4_4:-73327988 | Msa0701890:CDS |
| CAATTGCTGTGAGACGTGTG+CGG | 0.806188 | 4_4:-73323909 | Msa0701890:CDS |
| GTAAAGATGACTAACCAACG+GGG | 0.853539 | 4_4:-73325451 | Msa0701890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATAAATAATATAATA+TGG | + | chr4_4:73326290-73326309 | None:intergenic | 0.0% |
| !! | TATTATATTATTTATTTATA+TGG | - | chr4_4:73326290-73326309 | Msa0701890:intron | 0.0% |
| !! | ATTATATTATTTATTTATAT+GGG | - | chr4_4:73326291-73326310 | Msa0701890:intron | 0.0% |
| !! | AAAAAGAAAAAGAAAAAAAA+GGG | + | chr4_4:73320142-73320161 | None:intergenic | 10.0% |
| !! | TATTTATTTATATTGAATGT+TGG | - | chr4_4:73321278-73321297 | Msa0701890:intron | 10.0% |
| !! | ATTTATTTATATTGAATGTT+GGG | - | chr4_4:73321279-73321298 | Msa0701890:intron | 10.0% |
| !!! | AAACTAGTATTTTTAAAATA+TGG | + | chr4_4:73321337-73321356 | None:intergenic | 10.0% |
| !!! | TACTAAATTTTACAAATTTA+GGG | - | chr4_4:73321976-73321995 | Msa0701890:intron | 10.0% |
| !! | AATAGATTTAAATTAAACAA+AGG | + | chr4_4:73324220-73324239 | None:intergenic | 10.0% |
| !!! | AAATTATATCATTTAAAATC+TGG | - | chr4_4:73325581-73325600 | Msa0701890:intron | 10.0% |
| !! | TATTTATTAATAGGTAAATA+TGG | + | chr4_4:73326151-73326170 | None:intergenic | 10.0% |
| !!! | AATTTTTAATATCATAAGTT+AGG | - | chr4_4:73326641-73326660 | Msa0701890:intron | 10.0% |
| !! | GAAAAAGAAAAAGAAAAAAA+AGG | + | chr4_4:73320143-73320162 | None:intergenic | 15.0% |
| !!! | ACATGTGTTTTATTTATTTT+TGG | - | chr4_4:73320201-73320220 | Msa0701890:CDS | 15.0% |
| !! | TCATACTAACTATTATTATT+AGG | - | chr4_4:73321648-73321667 | Msa0701890:intron | 15.0% |
| !!! | ATGTTTTAAATCATACTAAA+TGG | - | chr4_4:73321689-73321708 | Msa0701890:intron | 15.0% |
| !!! | CTACTAAATTTTACAAATTT+AGG | - | chr4_4:73321975-73321994 | Msa0701890:intron | 15.0% |
| !!! | TTTTAAAACTTTGAGAATAA+AGG | + | chr4_4:73322147-73322166 | None:intergenic | 15.0% |
| !! | ATTTATTCATACTATATCAA+AGG | + | chr4_4:73323099-73323118 | None:intergenic | 15.0% |
| !! | AACATTATTATTAATCATTG+TGG | - | chr4_4:73323203-73323222 | Msa0701890:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr4_4:73323684-73323703 | Msa0701890:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAATAAA+TGG | - | chr4_4:73323751-73323770 | Msa0701890:intron | 15.0% |
| !! | CACAACAAAAAAAAAAAAAA+AGG | + | chr4_4:73323824-73323843 | None:intergenic | 15.0% |
| !!! | TTAATAGTATTTTTTGTATC+CGG | + | chr4_4:73325176-73325195 | None:intergenic | 15.0% |
| !!! | ATATAACTCATTTTATCATA+AGG | + | chr4_4:73326025-73326044 | None:intergenic | 15.0% |
| !! | TCATATTTACCTATTAAAAA+AGG | - | chr4_4:73326072-73326091 | Msa0701890:intron | 15.0% |
| !! | CATATTTACCTATTAAAAAA+GGG | - | chr4_4:73326073-73326092 | Msa0701890:intron | 15.0% |
| !!! | TTTTATTTTATTTGCTTGAA+TGG | - | chr4_4:73327022-73327041 | Msa0701890:intron | 15.0% |
| !! | AGCATTAAAAATGTATATAT+TGG | - | chr4_4:73327300-73327319 | Msa0701890:intron | 15.0% |
| !! | AACAAAATATGAAATAATGT+TGG | - | chr4_4:73327673-73327692 | Msa0701890:intron | 15.0% |
| !!! | TTATTTCTTTATTACAAGTT+TGG | - | chr4_4:73328251-73328270 | Msa0701890:intron | 15.0% |
| !!! | TTTTGGTTTTTCCTTTTTTT+AGG | - | chr4_4:73320019-73320038 | Msa0701890:CDS | 20.0% |
| !!! | TTTTTCCTTTTTTTAGGTTT+TGG | - | chr4_4:73320025-73320044 | Msa0701890:CDS | 20.0% |
| !! | CAAGACAAATAAAATTGAAA+AGG | + | chr4_4:73320313-73320332 | None:intergenic | 20.0% |
| !! | TAAGACTCTATGAATTTAAT+TGG | - | chr4_4:73320338-73320357 | Msa0701890:intron | 20.0% |
| !! | AAGACTCTATGAATTTAATT+GGG | - | chr4_4:73320339-73320358 | Msa0701890:intron | 20.0% |
| !!! | TTTTTCCTATACATTTGTTA+GGG | - | chr4_4:73320491-73320510 | Msa0701890:intron | 20.0% |
| !! | AATCACAAACATAAACAAAA+AGG | - | chr4_4:73320756-73320775 | Msa0701890:intron | 20.0% |
| !!! | TTAATCTCTCAAATTTTACT+TGG | - | chr4_4:73321397-73321416 | Msa0701890:intron | 20.0% |
| !!! | TATAAGTTGAAAACTTGATA+TGG | - | chr4_4:73321422-73321441 | Msa0701890:intron | 20.0% |
| !! | ATGATAATTATAACTGTGAT+GGG | + | chr4_4:73321476-73321495 | None:intergenic | 20.0% |
| !! | TATGATAATTATAACTGTGA+TGG | + | chr4_4:73321477-73321496 | None:intergenic | 20.0% |
| !! | AGTTCAAAATTTGCATTTAA+TGG | - | chr4_4:73321740-73321759 | Msa0701890:intron | 20.0% |
| !!! | AAATTGATGGAATAGTTTTA+TGG | - | chr4_4:73321887-73321906 | Msa0701890:intron | 20.0% |
| !!! | TAGAAGAAATCATTTTTTAG+GGG | + | chr4_4:73321958-73321977 | None:intergenic | 20.0% |
| !!! | GTAGAAGAAATCATTTTTTA+GGG | + | chr4_4:73321959-73321978 | None:intergenic | 20.0% |
| !!! | AGTAGAAGAAATCATTTTTT+AGG | + | chr4_4:73321960-73321979 | None:intergenic | 20.0% |
| !!! | AATTTTACAAATTTAGGGAA+TGG | - | chr4_4:73321981-73322000 | Msa0701890:intron | 20.0% |
| !! | ATAAATAAAGGGAACATAAT+GGG | + | chr4_4:73322012-73322031 | None:intergenic | 20.0% |
| !! | AATAAATAAAGGGAACATAA+TGG | + | chr4_4:73322013-73322032 | None:intergenic | 20.0% |
| !!! | GTGTTGGTTAAATAAATAAA+GGG | + | chr4_4:73322023-73322042 | None:intergenic | 20.0% |
| !!! | GTTCTAAATATTGATTGAAA+AGG | - | chr4_4:73322242-73322261 | Msa0701890:intron | 20.0% |
| !!! | ACTGCTTTTAATAATTACAT+TGG | + | chr4_4:73322401-73322420 | None:intergenic | 20.0% |
| !!! | AATTCTGTTTCATTTTGATT+CGG | - | chr4_4:73322792-73322811 | Msa0701890:intron | 20.0% |
| !! | AAACGATTATTATTTAGAGA+CGG | + | chr4_4:73323539-73323558 | None:intergenic | 20.0% |
| !! | CTCTAAATAATAATCGTTTA+AGG | - | chr4_4:73323540-73323559 | Msa0701890:intron | 20.0% |
| !!! | ATAAATTGTGTTGATTTTGA+TGG | - | chr4_4:73323588-73323607 | Msa0701890:intron | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | - | chr4_4:73323710-73323729 | Msa0701890:intron | 20.0% |
| !!! | TTTTTTTTGTTGTGCTATAT+AGG | - | chr4_4:73323830-73323849 | Msa0701890:intron | 20.0% |
| !! | GTTAGTAATATTGAAAAAGT+TGG | + | chr4_4:73323886-73323905 | None:intergenic | 20.0% |
| !!! | ATATAATATTGGCTATGTTA+TGG | - | chr4_4:73324336-73324355 | Msa0701890:intron | 20.0% |
| !!! | GTAAAAGTACAAAAATATTG+AGG | - | chr4_4:73324939-73324958 | Msa0701890:intron | 20.0% |
| !!! | AAATTACCATTTTTAAATGC+CGG | - | chr4_4:73325154-73325173 | Msa0701890:CDS | 20.0% |
| !! | TATTAATAGGTAAATATGGT+GGG | + | chr4_4:73326147-73326166 | None:intergenic | 20.0% |
| !! | TTATTAATAGGTAAATATGG+TGG | + | chr4_4:73326148-73326167 | None:intergenic | 20.0% |
| !! | GTTAAAACTAGTATTATATG+TGG | + | chr4_4:73326248-73326267 | None:intergenic | 20.0% |
| !! | TTTATTTATATGGGTAAAGA+TGG | - | chr4_4:73326300-73326319 | Msa0701890:intron | 20.0% |
| !! | ATACACTGGTATTAAATTAT+TGG | + | chr4_4:73327132-73327151 | None:intergenic | 20.0% |
| !! | TATGCTTCTATCAAAAAAAT+TGG | + | chr4_4:73328475-73328494 | None:intergenic | 20.0% |
| ! | AAGCATCTGAAAAACAAAAA+CGG | + | chr4_4:73319851-73319870 | None:intergenic | 25.0% |
| ! | GATTTCAATCATTCAAATGA+GGG | - | chr4_4:73319982-73320001 | Msa0701890:CDS | 25.0% |
| !! | GGGTTTAATTATACAGATTT+TGG | - | chr4_4:73320002-73320021 | Msa0701890:CDS | 25.0% |
| ! | TTCAACCAAAACCTAAAAAA+AGG | + | chr4_4:73320033-73320052 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAAAAAAAGGG+TGG | + | chr4_4:73320139-73320158 | None:intergenic | 25.0% |
| ! | ATAAAACACATGTTGCATAT+GGG | + | chr4_4:73320194-73320213 | None:intergenic | 25.0% |
| ! | AATAAAACACATGTTGCATA+TGG | + | chr4_4:73320195-73320214 | None:intergenic | 25.0% |
| ! | CTAACAAATGTATAGGAAAA+AGG | + | chr4_4:73320492-73320511 | None:intergenic | 25.0% |
| !! | CTTTTTCCTATACATTTGTT+AGG | - | chr4_4:73320490-73320509 | Msa0701890:intron | 25.0% |
| !!! | TTTTCCTATACATTTGTTAG+GGG | - | chr4_4:73320492-73320511 | Msa0701890:intron | 25.0% |
| ! | AAGCATATCAAAACAAAATC+AGG | + | chr4_4:73320714-73320733 | None:intergenic | 25.0% |
| ! | TGTGATTTAAACATGAAAAC+AGG | + | chr4_4:73320743-73320762 | None:intergenic | 25.0% |
| ! | TGTATATAAGCTTAACCAAT+TGG | + | chr4_4:73321368-73321387 | None:intergenic | 25.0% |
| ! | TGATAATTATAACTGTGATG+GGG | + | chr4_4:73321475-73321494 | None:intergenic | 25.0% |
| ! | AAGGAATTCAAGTATATCAT+TGG | - | chr4_4:73321543-73321562 | Msa0701890:intron | 25.0% |
| ! | AAACCCATAGAAATTGAAAT+GGG | - | chr4_4:73321864-73321883 | Msa0701890:intron | 25.0% |
| ! | TTTCCCATTTCAATTTCTAT+GGG | + | chr4_4:73321870-73321889 | None:intergenic | 25.0% |
| ! | ATTTCCCATTTCAATTTCTA+TGG | + | chr4_4:73321871-73321890 | None:intergenic | 25.0% |
| ! | AAATTGAAATGGGAAATTGA+TGG | - | chr4_4:73321874-73321893 | Msa0701890:intron | 25.0% |
| ! | TAAATAAAGGGAACATAATG+GGG | + | chr4_4:73322011-73322030 | None:intergenic | 25.0% |
| !!! | GGTGTTGGTTAAATAAATAA+AGG | + | chr4_4:73322024-73322043 | None:intergenic | 25.0% |
| !! | CAGTATAACTTTTGTAATCT+CGG | - | chr4_4:73322375-73322394 | Msa0701890:CDS | 25.0% |
| !!! | CTTTTTTTGATTGAGTTTTC+TGG | - | chr4_4:73322490-73322509 | Msa0701890:intron | 25.0% |
| !!! | ATTCTGTTTCATTTTGATTC+GGG | - | chr4_4:73322793-73322812 | Msa0701890:intron | 25.0% |
| !!! | GTAAAAGTATTCAACAGTAT+TGG | - | chr4_4:73323133-73323152 | Msa0701890:intron | 25.0% |
| !! | ACGATTTTTCTCTTTAAACA+CGG | - | chr4_4:73323466-73323485 | Msa0701890:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr4_4:73323640-73323659 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr4_4:73323641-73323660 | None:intergenic | 25.0% |
| ! | AGAACAGGTAATATAAAAAC+AGG | + | chr4_4:73324030-73324049 | None:intergenic | 25.0% |
| ! | TAAACACTTAGTTAAATGAG+TGG | + | chr4_4:73324077-73324096 | None:intergenic | 25.0% |
| ! | TGTTAGATAATCTAGTAAGT+TGG | - | chr4_4:73324249-73324268 | Msa0701890:intron | 25.0% |
| ! | TCTGCAGTTGAATATAATAT+TGG | - | chr4_4:73324325-73324344 | Msa0701890:intron | 25.0% |
| !!! | TCTTTTTTTAAGCCTGAATT+CGG | - | chr4_4:73324470-73324489 | Msa0701890:intron | 25.0% |
| ! | TAGATATTTGATATCTATCG+AGG | - | chr4_4:73324540-73324559 | Msa0701890:intron | 25.0% |
| ! | AGATATTTGATATCTATCGA+GGG | - | chr4_4:73324541-73324560 | Msa0701890:intron | 25.0% |
| ! | TATTTGTGATTGCTTATTGT+AGG | - | chr4_4:73324682-73324701 | Msa0701890:CDS | 25.0% |
| ! | ATGCTGTAATCATGATTAAA+GGG | - | chr4_4:73324798-73324817 | Msa0701890:intron | 25.0% |
| !! | CATTAAAACAGAAAAAGTAC+AGG | - | chr4_4:73324896-73324915 | Msa0701890:intron | 25.0% |
| ! | CAAAGATAAAAGTAAGAGTT+AGG | + | chr4_4:73325230-73325249 | None:intergenic | 25.0% |
| !!! | ACTCTTACTTTTATCTTTGA+AGG | - | chr4_4:73325231-73325250 | Msa0701890:CDS | 25.0% |
| ! | AGATAATTAGAATTCTGATC+CGG | + | chr4_4:73325417-73325436 | None:intergenic | 25.0% |
| ! | ATAGAAATTCCAAGAAAATG+TGG | - | chr4_4:73325466-73325485 | Msa0701890:CDS | 25.0% |
| !! | TTAACAAATCCACATTTTCT+TGG | + | chr4_4:73325478-73325497 | None:intergenic | 25.0% |
| ! | TAACATTATTGCAATGACAA+TGG | - | chr4_4:73325495-73325514 | Msa0701890:intron | 25.0% |
| ! | AACATTATTGCAATGACAAT+GGG | - | chr4_4:73325496-73325515 | Msa0701890:intron | 25.0% |
| !! | TGATAAATTTTGCAAAAGAG+TGG | - | chr4_4:73325545-73325564 | Msa0701890:intron | 25.0% |
| ! | CTCTAGCTATAAATTCTATT+TGG | - | chr4_4:73325774-73325793 | Msa0701890:intron | 25.0% |
| !! | GAAACTGACATTTTCAATTT+TGG | + | chr4_4:73325815-73325834 | None:intergenic | 25.0% |
| ! | GTAAAAGGAAAGATTGATTA+AGG | - | chr4_4:73325888-73325907 | Msa0701890:intron | 25.0% |
| ! | GGAATAAGTGAAAAAATGAA+AGG | - | chr4_4:73325963-73325982 | Msa0701890:intron | 25.0% |
| !!! | AAACTTGGGTTTTGTTTTAT+TGG | - | chr4_4:73326554-73326573 | Msa0701890:intron | 25.0% |
| !! | AATTGTGATTAGACTTTTGA+TGG | - | chr4_4:73326709-73326728 | Msa0701890:intron | 25.0% |
| !! | AATTTGTTTGCAATCTTCAT+TGG | - | chr4_4:73326735-73326754 | Msa0701890:intron | 25.0% |
| !!! | AAAAGTATCGTAAGAATGAA+CGG | + | chr4_4:73326794-73326813 | None:intergenic | 25.0% |
| !! | TGGTATTAAATTATTGGTCT+GGG | + | chr4_4:73327126-73327145 | None:intergenic | 25.0% |
| ! | ACTATTAGACAATTATACAC+TGG | + | chr4_4:73327146-73327165 | None:intergenic | 25.0% |
| ! | AGCAGCTAAAGTTAAATAAT+TGG | + | chr4_4:73327224-73327243 | None:intergenic | 25.0% |
| !! | AAACAAGCAAATTTTGTTGA+AGG | - | chr4_4:73327560-73327579 | Msa0701890:intron | 25.0% |
| !!! | TATTGAGAGTACTCATATAT+TGG | + | chr4_4:73327601-73327620 | None:intergenic | 25.0% |
| !! | TCTAGTTTGATTAGAGATTA+TGG | - | chr4_4:73327625-73327644 | Msa0701890:CDS | 25.0% |
| !!! | AGAATGTTTTGTTTTTCTTG+TGG | - | chr4_4:73328218-73328237 | Msa0701890:intron | 25.0% |
| ! | TTTGTCTAACAGTTAAAAAG+TGG | - | chr4_4:73328308-73328327 | Msa0701890:CDS | 25.0% |
| ! | TCAAACAAATTTCAAGAGTT+TGG | - | chr4_4:73328584-73328603 | Msa0701890:five_prime_UTR | 25.0% |
| ! | TAATAAGACTAACACTTTGA+TGG | + | chr4_4:73328632-73328651 | None:intergenic | 25.0% |
| AAAAAGAAGTTGAGAATCGA+TGG | + | chr4_4:73319789-73319808 | None:intergenic | 30.0% | |
| GATGTGACTATTACTAATGA+TGG | - | chr4_4:73319886-73319905 | Msa0701890:three_prime_UTR | 30.0% | |
| AATTAGATTAACCTTAGCAG+CGG | + | chr4_4:73319947-73319966 | None:intergenic | 30.0% | |
| AATGATTGAAATCGCAATGA+AGG | + | chr4_4:73319975-73319994 | None:intergenic | 30.0% | |
| CGATTTCAATCATTCAAATG+AGG | - | chr4_4:73319981-73320000 | Msa0701890:exon | 30.0% | |
| TCTATATCCACTGATAATTG+AGG | + | chr4_4:73320275-73320294 | None:intergenic | 30.0% | |
| !! | CTTTTCTCACTTTTCTTAGA+TGG | - | chr4_4:73320519-73320538 | Msa0701890:intron | 30.0% |
| GGATGTTCATAGTAATAAGA+AGG | + | chr4_4:73320693-73320712 | None:intergenic | 30.0% | |
| GTAGCTCAAGTAGTTAATTT+GGG | + | chr4_4:73320912-73320931 | None:intergenic | 30.0% | |
| TGTAGCTCAAGTAGTTAATT+TGG | + | chr4_4:73320913-73320932 | None:intergenic | 30.0% | |
| TAATGAAAGCTTGCATAACT+TGG | - | chr4_4:73320996-73321015 | Msa0701890:intron | 30.0% | |
| !!! | TATTTTTTGTGTTGCTTAGC+TGG | - | chr4_4:73321111-73321130 | Msa0701890:CDS | 30.0% |
| CAGTGATTTCTTTGCTAATT+TGG | - | chr4_4:73321228-73321247 | Msa0701890:intron | 30.0% | |
| AGTAAAGGCTATATATAGCT+TGG | + | chr4_4:73321449-73321468 | None:intergenic | 30.0% | |
| AATTATCTCATAGCTTTCGT+TGG | - | chr4_4:73321496-73321515 | Msa0701890:intron | 30.0% | |
| ATGAACTTATCAACGTTCTA+TGG | - | chr4_4:73321764-73321783 | Msa0701890:intron | 30.0% | |
| AGTAATTGTTGCTCCATAAT+TGG | - | chr4_4:73321824-73321843 | Msa0701890:intron | 30.0% | |
| GAAACCCATAGAAATTGAAA+TGG | - | chr4_4:73321863-73321882 | Msa0701890:intron | 30.0% | |
| ATTCATTGAGATTAGTAGAG+AGG | - | chr4_4:73321914-73321933 | Msa0701890:intron | 30.0% | |
| AAATAAAGGGAACATAATGG+GGG | + | chr4_4:73322010-73322029 | None:intergenic | 30.0% | |
| AGCACTCAAACTGAAAAAAA+TGG | + | chr4_4:73322207-73322226 | None:intergenic | 30.0% | |
| GAGTGAAATCAATAGATCAA+AGG | + | chr4_4:73322349-73322368 | None:intergenic | 30.0% | |
| TCAGGGAATCAATATATTGA+AGG | - | chr4_4:73322818-73322837 | Msa0701890:intron | 30.0% | |
| ! | ATCAATATATTGAAGGCACA+TGG | - | chr4_4:73322825-73322844 | Msa0701890:intron | 30.0% |
| AATGGTTATGCTCTTAATAC+TGG | - | chr4_4:73322876-73322895 | Msa0701890:intron | 30.0% | |
| TCAGAAGACAAAAATGCAAT+TGG | - | chr4_4:73322965-73322984 | Msa0701890:intron | 30.0% | |
| CAGAAGACAAAAATGCAATT+GGG | - | chr4_4:73322966-73322985 | Msa0701890:intron | 30.0% | |
| TAGGAAGGTAATACATAGAA+CGG | + | chr4_4:73323062-73323081 | None:intergenic | 30.0% | |
| CTATATCAAAGGAAAGATAG+TGG | + | chr4_4:73323088-73323107 | None:intergenic | 30.0% | |
| !! | ATTCAAAGTACTGTTTAAGC+TGG | - | chr4_4:73323179-73323198 | Msa0701890:intron | 30.0% |
| AATGTTGTTCTGACTACTAA+AGG | - | chr4_4:73323388-73323407 | Msa0701890:intron | 30.0% | |
| ! | TACTAAAGGAATTGATGACA+TGG | - | chr4_4:73323402-73323421 | Msa0701890:intron | 30.0% |
| ATCGTTAGAATAAGTACTAG+TGG | + | chr4_4:73323451-73323470 | None:intergenic | 30.0% | |
| GATTATTATTTAGAGACGGA+GGG | + | chr4_4:73323535-73323554 | None:intergenic | 30.0% | |
| ! | AATCGTTTAAGGTTTATGCA+CGG | - | chr4_4:73323551-73323570 | Msa0701890:intron | 30.0% |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr4_4:73323637-73323656 | Msa0701890:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr4_4:73323776-73323795 | Msa0701890:intron | 30.0% | |
| ! | TTTTCAGATATCAAGATGAG+TGG | + | chr4_4:73323856-73323875 | None:intergenic | 30.0% |
| !! | ACACTATACTTTGAGATCTA+TGG | - | chr4_4:73323928-73323947 | Msa0701890:CDS | 30.0% |
| TATTCAACTGCAGAAGAAAA+GGG | + | chr4_4:73324319-73324338 | None:intergenic | 30.0% | |
| ATATTCAACTGCAGAAGAAA+AGG | + | chr4_4:73324320-73324339 | None:intergenic | 30.0% | |
| ATCAACATCTACTTAATGCA+TGG | + | chr4_4:73324390-73324409 | None:intergenic | 30.0% | |
| GATGCTGTAATCATGATTAA+AGG | - | chr4_4:73324797-73324816 | Msa0701890:intron | 30.0% | |
| AAAAAATTCAACCCAATCCT+TGG | + | chr4_4:73324858-73324877 | None:intergenic | 30.0% | |
| TTGTATCCGGCATTTAAAAA+TGG | + | chr4_4:73325163-73325182 | None:intergenic | 30.0% | |
| GTTAGGTAATGTTGTAGAAA+TGG | + | chr4_4:73325213-73325232 | None:intergenic | 30.0% | |
| !! | TACTTTTATCTTTGAAGGTG+TGG | - | chr4_4:73325236-73325255 | Msa0701890:intron | 30.0% |
| ACACTAAAAAAAGTAAGAGC+AGG | + | chr4_4:73325270-73325289 | None:intergenic | 30.0% | |
| TGAAACTGTCCAAATAAAGA+GGG | - | chr4_4:73325368-73325387 | Msa0701890:intron | 30.0% | |
| TTATTAGCACCCTCTTTATT+TGG | + | chr4_4:73325380-73325399 | None:intergenic | 30.0% | |
| GATAATTAGAATTCTGATCC+GGG | + | chr4_4:73325416-73325435 | None:intergenic | 30.0% | |
| ! | TTGACTATGTTTTCCTCTTT+AGG | - | chr4_4:73325634-73325653 | Msa0701890:intron | 30.0% |
| AATTTATAGCTAGAGAATGC+AGG | + | chr4_4:73325769-73325788 | None:intergenic | 30.0% | |
| TTGAGAGGAAAGAAAGTAAA+AGG | - | chr4_4:73325873-73325892 | Msa0701890:intron | 30.0% | |
| GAAAGTGAATAGAAAGTGAA+AGG | - | chr4_4:73325914-73325933 | Msa0701890:intron | 30.0% | |
| ! | AAGGCAAGTAAGATGATTTT+TGG | - | chr4_4:73325933-73325952 | Msa0701890:intron | 30.0% |
| ! | AGGCAAGTAAGATGATTTTT+GGG | - | chr4_4:73325934-73325953 | Msa0701890:intron | 30.0% |
| !!! | AAGATGATTTTTGGGTTGTT+TGG | - | chr4_4:73325942-73325961 | Msa0701890:intron | 30.0% |
| GAAAATTAAACCAATCGTCA+AGG | - | chr4_4:73326576-73326595 | Msa0701890:intron | 30.0% | |
| TGCTTGGTTAATGTAAATTC+AGG | - | chr4_4:73326849-73326868 | Msa0701890:CDS | 30.0% | |
| TTGGTTAATGTAAATTCAGG+TGG | - | chr4_4:73326852-73326871 | Msa0701890:CDS | 30.0% | |
| AGCAGCATTATCAGTTTATT+TGG | - | chr4_4:73326897-73326916 | Msa0701890:CDS | 30.0% | |
| CTTGATTGTGCATATAACTA+GGG | - | chr4_4:73327062-73327081 | Msa0701890:intron | 30.0% | |
| !! | ACACTAATGGTGTCAAATTT+TGG | - | chr4_4:73327100-73327119 | Msa0701890:intron | 30.0% |
| CTGGTATTAAATTATTGGTC+TGG | + | chr4_4:73327127-73327146 | None:intergenic | 30.0% | |
| !!! | GTCCGCGTTATAAAATTTTT+TGG | - | chr4_4:73327198-73327217 | Msa0701890:intron | 30.0% |
| ! | GGCCAAAAAATTTTATAACG+CGG | + | chr4_4:73327203-73327222 | None:intergenic | 30.0% |
| ! | ATATATTGGCAACACTTTTC+TGG | - | chr4_4:73327314-73327333 | Msa0701890:intron | 30.0% |
| !! | CAGATAAGAAGCATTTATCA+AGG | - | chr4_4:73327424-73327443 | Msa0701890:intron | 30.0% |
| ! | GAAGCATTTATCAAGGTAAT+TGG | - | chr4_4:73327431-73327450 | Msa0701890:intron | 30.0% |
| GAGCAAAGTCAAAATTATTC+AGG | - | chr4_4:73327895-73327914 | Msa0701890:intron | 30.0% | |
| ! | GTATTGAAAGCTTTATGTTG+AGG | + | chr4_4:73327954-73327973 | None:intergenic | 30.0% |
| AGTTGCAAACTGAGATAAAT+GGG | + | chr4_4:73328002-73328021 | None:intergenic | 30.0% | |
| ! | AGTGTGTACTTGAATTTTGA+CGG | - | chr4_4:73328092-73328111 | Msa0701890:intron | 30.0% |
| GCTATATTTATTACCCTTGA+TGG | - | chr4_4:73328185-73328204 | Msa0701890:CDS | 30.0% | |
| ATGATTTACATGCCTTTCTA+AGG | - | chr4_4:73328361-73328380 | Msa0701890:intron | 30.0% | |
| ! | TTTTTAACGTAAGAACGTAG+TGG | - | chr4_4:73328430-73328449 | Msa0701890:intron | 30.0% |
| ! | TTTTAACGTAAGAACGTAGT+GGG | - | chr4_4:73328431-73328450 | Msa0701890:intron | 30.0% |
| AATTGACAGCTCTTAAACAT+GGG | + | chr4_4:73328502-73328521 | None:intergenic | 30.0% | |
| AATTTACTAGCACAATCAGT+TGG | - | chr4_4:73328534-73328553 | Msa0701890:five_prime_UTR | 30.0% | |
| ! | ATTAGTTGTGGTTTGGAATT+TGG | - | chr4_4:73328557-73328576 | Msa0701890:five_prime_UTR | 30.0% |
| GGAAAAGGAAAGAGAAAACT+AGG | - | chr4_4:73319432-73319451 | Msa0701890:three_prime_UTR | 35.0% | |
| ! | TGCTGCTCTTTTCAAATCAA+GGG | + | chr4_4:73319476-73319495 | None:intergenic | 35.0% |
| ! | TTGCTGCTCTTTTCAAATCA+AGG | + | chr4_4:73319477-73319496 | None:intergenic | 35.0% |
| TGTGTTAGCAAAAACGGTTA+CGG | + | chr4_4:73319664-73319683 | None:intergenic | 35.0% | |
| AAAGCGTGTGTTAGCAAAAA+CGG | + | chr4_4:73319670-73319689 | None:intergenic | 35.0% | |
| !! | CAGATGCTTGTTGATGATAT+CGG | - | chr4_4:73319862-73319881 | Msa0701890:three_prime_UTR | 35.0% |
| TGCTACTATACTTAAGATGC+TGG | - | chr4_4:73319909-73319928 | Msa0701890:three_prime_UTR | 35.0% | |
| ATTAGATTAACCTTAGCAGC+GGG | + | chr4_4:73319946-73319965 | None:intergenic | 35.0% | |
| TTGAAATCGCAATGAAGGAT+CGG | + | chr4_4:73319970-73319989 | None:intergenic | 35.0% | |
| AGAGAGCTAATGATCTTGTT+AGG | - | chr4_4:73320233-73320252 | Msa0701890:intron | 35.0% | |
| TATCCACTGATAATTGAGGT+TGG | + | chr4_4:73320271-73320290 | None:intergenic | 35.0% | |
| GCTATTCAGAACAATCAACA+CGG | + | chr4_4:73320400-73320419 | None:intergenic | 35.0% | |
| CTTGAGAAATCTTACCTTGA+CGG | + | chr4_4:73320465-73320484 | None:intergenic | 35.0% | |
| AACACCCCTAACAAATGTAT+AGG | + | chr4_4:73320499-73320518 | None:intergenic | 35.0% | |
| ! | GCATGTTATGTTAGTATCGA+AGG | - | chr4_4:73320849-73320868 | Msa0701890:intron | 35.0% |
| ! | TAGTTAATTTGGGCATCTGA+AGG | + | chr4_4:73320902-73320921 | None:intergenic | 35.0% |
| ! | GGATTGTTTTCTTCACTTGT+AGG | - | chr4_4:73321132-73321151 | Msa0701890:CDS | 35.0% |
| !! | CTAGTTTGTTCACATCCAAT+TGG | - | chr4_4:73321350-73321369 | Msa0701890:intron | 35.0% |
| ! | GTATATCATTGGTCTACTCA+CGG | - | chr4_4:73321554-73321573 | Msa0701890:intron | 35.0% |
| TGGAGCAACAATTACTGTAT+CGG | + | chr4_4:73321820-73321839 | None:intergenic | 35.0% | |
| !!! | CATTTTTTAGGGGAGACTTT+AGG | + | chr4_4:73321948-73321967 | None:intergenic | 35.0% |
| ! | AATAAAGGGAACATAATGGG+GGG | + | chr4_4:73322009-73322028 | None:intergenic | 35.0% |
| ATGATGATCATGTCATTGCT+TGG | - | chr4_4:73322283-73322302 | Msa0701890:intron | 35.0% | |
| ! | CTTGGTTGAAACATTTGTTG+TGG | - | chr4_4:73322301-73322320 | Msa0701890:intron | 35.0% |
| !! | TTGAAACATTTGTTGTGGAG+AGG | - | chr4_4:73322306-73322325 | Msa0701890:intron | 35.0% |
| !! | TGAAACATTTGTTGTGGAGA+GGG | - | chr4_4:73322307-73322326 | Msa0701890:intron | 35.0% |
| TGTGTGTATGAAATTCATGC+AGG | - | chr4_4:73322559-73322578 | Msa0701890:intron | 35.0% | |
| CTGTAAAGATGACTAACCAA+CGG | - | chr4_4:73322600-73322619 | Msa0701890:intron | 35.0% | |
| TGTAAAGATGACTAACCAAC+GGG | - | chr4_4:73322601-73322620 | Msa0701890:intron | 35.0% | |
| TTCTACTACCAACCTTGATT+GGG | + | chr4_4:73322640-73322659 | None:intergenic | 35.0% | |
| ATTCTACTACCAACCTTGAT+TGG | + | chr4_4:73322641-73322660 | None:intergenic | 35.0% | |
| !!! | TTCATTTTGATTCGGGTTTC+AGG | - | chr4_4:73322800-73322819 | Msa0701890:intron | 35.0% |
| !!! | TCATTTTGATTCGGGTTTCA+GGG | - | chr4_4:73322801-73322820 | Msa0701890:intron | 35.0% |
| ! | AGAGACAGCTTTTTGATGAA+TGG | - | chr4_4:73322858-73322877 | Msa0701890:intron | 35.0% |
| ! | AAGACAAGCAATTTTTGCAG+GGG | + | chr4_4:73322934-73322953 | None:intergenic | 35.0% |
| ! | CAAGACAAGCAATTTTTGCA+GGG | + | chr4_4:73322935-73322954 | None:intergenic | 35.0% |
| ! | TCAAGACAAGCAATTTTTGC+AGG | + | chr4_4:73322936-73322955 | None:intergenic | 35.0% |
| ! | AAGTATTAGTTTCTGATCCC+AGG | - | chr4_4:73322994-73323013 | Msa0701890:intron | 35.0% |
| ! | AGTATTAGTTTCTGATCCCA+GGG | - | chr4_4:73322995-73323014 | Msa0701890:intron | 35.0% |
| !! | AAAGGAAAGATAGTGGAACT+AGG | + | chr4_4:73323081-73323100 | None:intergenic | 35.0% |
| AAATTTGATCGTGCTCGATT+TGG | - | chr4_4:73323226-73323245 | Msa0701890:intron | 35.0% | |
| AATTTGATCGTGCTCGATTT+GGG | - | chr4_4:73323227-73323246 | Msa0701890:intron | 35.0% | |
| TTAATCCTGCAAAACGACAA+GGG | + | chr4_4:73323264-73323283 | None:intergenic | 35.0% | |
| !!! | ACTTTTTTCCTCTTTCAGAG+AGG | - | chr4_4:73323318-73323337 | Msa0701890:CDS | 35.0% |
| ATCGAGAAATTACTGAAAGC+TGG | - | chr4_4:73323361-73323380 | Msa0701890:intron | 35.0% | |
| CGATTATTATTTAGAGACGG+AGG | + | chr4_4:73323536-73323555 | None:intergenic | 35.0% | |
| AGGTTTATGCACGGTTATTA+AGG | - | chr4_4:73323560-73323579 | Msa0701890:intron | 35.0% | |
| GAGGTTCTTATCATCAGAAT+TGG | + | chr4_4:73323908-73323927 | None:intergenic | 35.0% | |
| AGATCTCAAAGTATAGTGTG+AGG | + | chr4_4:73323927-73323946 | None:intergenic | 35.0% | |
| TCCTGCATTAATAGATGTCA+TGG | - | chr4_4:73323982-73324001 | Msa0701890:intron | 35.0% | |
| CCTGCATTAATAGATGTCAT+GGG | - | chr4_4:73323983-73324002 | Msa0701890:intron | 35.0% | |
| ATGTCATGGGTCATATTGAT+GGG | - | chr4_4:73323996-73324015 | Msa0701890:intron | 35.0% | |
| ATTCAACTGCAGAAGAAAAG+GGG | + | chr4_4:73324318-73324337 | None:intergenic | 35.0% | |
| ATTCTTCCCTAGTAGAATGA+TGG | - | chr4_4:73324415-73324434 | Msa0701890:intron | 35.0% | |
| AGACTACCATCATTCTACTA+GGG | + | chr4_4:73324424-73324443 | None:intergenic | 35.0% | |
| AAGACTACCATCATTCTACT+AGG | + | chr4_4:73324425-73324444 | None:intergenic | 35.0% | |
| ! | ATGCATACTAGTTTCCTCTA+TGG | - | chr4_4:73324641-73324660 | Msa0701890:intron | 35.0% |
| ! | TGCATACTAGTTTCCTCTAT+GGG | - | chr4_4:73324642-73324661 | Msa0701890:intron | 35.0% |
| ! | TCAACATTTGCTGATATGGA+AGG | - | chr4_4:73324707-73324726 | Msa0701890:CDS | 35.0% |
| ! | CAACATTTGCTGATATGGAA+GGG | - | chr4_4:73324708-73324727 | Msa0701890:CDS | 35.0% |
| ! | AACATTTGCTGATATGGAAG+GGG | - | chr4_4:73324709-73324728 | Msa0701890:CDS | 35.0% |
| ! | ACTTTTGAACCGTCATTTCT+TGG | - | chr4_4:73324737-73324756 | Msa0701890:intron | 35.0% |
| ! | ACTTACTGCACTTGAAGTTT+TGG | + | chr4_4:73324825-73324844 | None:intergenic | 35.0% |
| AAAACTTCAAGTGCAGTAAG+TGG | - | chr4_4:73324824-73324843 | Msa0701890:intron | 35.0% | |
| GAATCTTCTACAGACAAATG+AGG | - | chr4_4:73324967-73324986 | Msa0701890:intron | 35.0% | |
| ! | AAACTCCCTATCTTTTGCAT+CGG | - | chr4_4:73325032-73325051 | Msa0701890:intron | 35.0% |
| CTAAACCGATGCAAAAGATA+GGG | + | chr4_4:73325040-73325059 | None:intergenic | 35.0% | |
| TCTAAACCGATGCAAAAGAT+AGG | + | chr4_4:73325041-73325060 | None:intergenic | 35.0% | |
| ATGTTTCACACGAAGCTAAT+TGG | - | chr4_4:73325078-73325097 | Msa0701890:CDS | 35.0% | |
| GCCTAATCTTACATTGTTGT+GGG | - | chr4_4:73325100-73325119 | Msa0701890:CDS | 35.0% | |
| CCTAATCTTACATTGTTGTG+GGG | - | chr4_4:73325101-73325120 | Msa0701890:CDS | 35.0% | |
| GTAATGTTGTAGAAATGGCA+TGG | + | chr4_4:73325208-73325227 | None:intergenic | 35.0% | |
| GTGAAACTGTCCAAATAAAG+AGG | - | chr4_4:73325367-73325386 | Msa0701890:intron | 35.0% | |
| TTTGCAAAAGAGTGGTGATA+TGG | - | chr4_4:73325553-73325572 | Msa0701890:intron | 35.0% | |
| AGAATTAACGAGACCTAAAG+AGG | + | chr4_4:73325650-73325669 | None:intergenic | 35.0% | |
| ATAGCCTAAGTGAATTCTAC+TGG | + | chr4_4:73325844-73325863 | None:intergenic | 35.0% | |
| GAATTCACTTAGGCTATGTT+TGG | - | chr4_4:73325847-73325866 | Msa0701890:intron | 35.0% | |
| ! | GTGGAAACATTTTGTAGTGT+GGG | - | chr4_4:73326361-73326380 | Msa0701890:intron | 35.0% |
| GATAAGAAAGAAAGACATGC+AGG | + | chr4_4:73326388-73326407 | None:intergenic | 35.0% | |
| TGTTCCATTGAAACAAACGA+TGG | - | chr4_4:73326412-73326431 | Msa0701890:intron | 35.0% | |
| AAGAAAGAAGAAGGATGGAT+AGG | + | chr4_4:73326472-73326491 | None:intergenic | 35.0% | |
| GTCTTCATTAATGGTACGTT+TGG | + | chr4_4:73326500-73326519 | None:intergenic | 35.0% | |
| ACCATTAATGAAGACTCTGT+TGG | - | chr4_4:73326505-73326524 | Msa0701890:intron | 35.0% | |
| CCATTAATGAAGACTCTGTT+GGG | - | chr4_4:73326506-73326525 | Msa0701890:intron | 35.0% | |
| CATTAATGAAGACTCTGTTG+GGG | - | chr4_4:73326507-73326526 | Msa0701890:intron | 35.0% | |
| AATGATCAGATGCCATGAAA+TGG | - | chr4_4:73326531-73326550 | Msa0701890:intron | 35.0% | |
| ATGCCATGAAATGGAAACTT+GGG | - | chr4_4:73326540-73326559 | Msa0701890:intron | 35.0% | |
| AAACCCAAGTTTCCATTTCA+TGG | + | chr4_4:73326546-73326565 | None:intergenic | 35.0% | |
| ! | CAATCGTCAAGGAGATTTTT+GGG | - | chr4_4:73326587-73326606 | Msa0701890:intron | 35.0% |
| ! | AATCGTCAAGGAGATTTTTG+GGG | - | chr4_4:73326588-73326607 | Msa0701890:intron | 35.0% |
| GTTAATGTAAATTCAGGTGG+TGG | - | chr4_4:73326855-73326874 | Msa0701890:CDS | 35.0% | |
| GAATACCTTGCTACAACTTT+AGG | - | chr4_4:73326919-73326938 | Msa0701890:intron | 35.0% | |
| TGGAATGATTAACAGAGACT+CGG | + | chr4_4:73326977-73326996 | None:intergenic | 35.0% | |
| GTCTCTGTTAATCATTCCAA+AGG | - | chr4_4:73326978-73326997 | Msa0701890:intron | 35.0% | |
| CTGTTAATCATTCCAAAGGT+AGG | - | chr4_4:73326982-73327001 | Msa0701890:intron | 35.0% | |
| GCTTGATTGTGCATATAACT+AGG | - | chr4_4:73327061-73327080 | Msa0701890:intron | 35.0% | |
| GTTCTTTGATAAGTAAGCTC+TGG | - | chr4_4:73327263-73327282 | Msa0701890:intron | 35.0% | |
| AATTCCCAAACAAACAACAC+AGG | + | chr4_4:73327512-73327531 | None:intergenic | 35.0% | |
| !! | CACAATTGCTGTTCTAGTTT+CGG | - | chr4_4:73327731-73327750 | Msa0701890:intron | 35.0% |
| AGGAAAGACTAGAAACAACT+TGG | - | chr4_4:73327847-73327866 | Msa0701890:intron | 35.0% | |
| !!! | ATTTTGACTTTGCTCATTGC+AGG | + | chr4_4:73327890-73327909 | None:intergenic | 35.0% |
| TTGCAAACTGAGATAAATGG+GGG | + | chr4_4:73328000-73328019 | None:intergenic | 35.0% | |
| GTTGCAAACTGAGATAAATG+GGG | + | chr4_4:73328001-73328020 | None:intergenic | 35.0% | |
| CAGTTGCAAACTGAGATAAA+TGG | + | chr4_4:73328003-73328022 | None:intergenic | 35.0% | |
| AAGCTGCTATTACTATTCTC+CGG | - | chr4_4:73328023-73328042 | Msa0701890:intron | 35.0% | |
| !! | CGATATGATCAAGCTTGTTA+AGG | - | chr4_4:73328051-73328070 | Msa0701890:intron | 35.0% |
| !! | ATCAAGCTTGTTAAGGATGA+AGG | - | chr4_4:73328058-73328077 | Msa0701890:intron | 35.0% |
| ! | TACTTGCTAGTTCTTGTGTA+AGG | - | chr4_4:73328119-73328138 | Msa0701890:intron | 35.0% |
| ! | ACTTGCTAGTTCTTGTGTAA+GGG | - | chr4_4:73328120-73328139 | Msa0701890:intron | 35.0% |
| ! | TTTATTACCCTTGATGGTCT+TGG | - | chr4_4:73328191-73328210 | Msa0701890:CDS | 35.0% |
| ! | TGGAGCTAATATTTTGCACT+AGG | - | chr4_4:73328271-73328290 | Msa0701890:intron | 35.0% |
| ! | GGAGCTAATATTTTGCACTA+GGG | - | chr4_4:73328272-73328291 | Msa0701890:intron | 35.0% |
| ! | GAGCTAATATTTTGCACTAG+GGG | - | chr4_4:73328273-73328292 | Msa0701890:intron | 35.0% |
| CAATTGACAGCTCTTAAACA+TGG | + | chr4_4:73328503-73328522 | None:intergenic | 35.0% | |
| !! | ACAATCAGTTGGATTAGTTG+TGG | - | chr4_4:73328545-73328564 | Msa0701890:five_prime_UTR | 35.0% |
| TAAGACTAACACTTTGATGG+TGG | + | chr4_4:73328629-73328648 | None:intergenic | 35.0% | |
| AAGTATAGAGAGTGAGTCAG+TGG | - | chr4_4:73319495-73319514 | Msa0701890:three_prime_UTR | 40.0% | |
| CATTGCGAAGTGAGTTTCTA+GGG | + | chr4_4:73319525-73319544 | None:intergenic | 40.0% | |
| ACATTGCGAAGTGAGTTTCT+AGG | + | chr4_4:73319526-73319545 | None:intergenic | 40.0% | |
| AATCAAACTCCTGACATCTC+CGG | - | chr4_4:73319554-73319573 | Msa0701890:three_prime_UTR | 40.0% | |
| AACATCGTGAAAACCTCACT+CGG | - | chr4_4:73319735-73319754 | Msa0701890:three_prime_UTR | 40.0% | |
| GAACTTCAGGATAGAGAAGT+TGG | - | chr4_4:73320059-73320078 | Msa0701890:intron | 40.0% | |
| CATCCAACCTCAATTATCAG+TGG | - | chr4_4:73320265-73320284 | Msa0701890:intron | 40.0% | |
| !! | GCATCACTGGCTTTCAAATA+TGG | + | chr4_4:73320563-73320582 | None:intergenic | 40.0% |
| TCATTGTGATCTAGCATCAC+TGG | + | chr4_4:73320576-73320595 | None:intergenic | 40.0% | |
| ACTACAACATACAGTTGCTC+AGG | + | chr4_4:73320636-73320655 | None:intergenic | 40.0% | |
| TTTGGGCATCTGAAGGATTT+GGG | + | chr4_4:73320895-73320914 | None:intergenic | 40.0% | |
| ATTTGGGCATCTGAAGGATT+TGG | + | chr4_4:73320896-73320915 | None:intergenic | 40.0% | |
| TAACTACTTGAGCTACACCT+TGG | - | chr4_4:73320916-73320935 | Msa0701890:intron | 40.0% | |
| AACTACTTGAGCTACACCTT+GGG | - | chr4_4:73320917-73320936 | Msa0701890:intron | 40.0% | |
| GAATACATATACAGTCCCCA+AGG | + | chr4_4:73320936-73320955 | None:intergenic | 40.0% | |
| !! | TGTTCCCTGTCTTATTTCCT+GGG | - | chr4_4:73321023-73321042 | Msa0701890:intron | 40.0% |
| ! | ACTGTGATGGGGAAAAGTAA+AGG | + | chr4_4:73321464-73321483 | None:intergenic | 40.0% |
| ! | TTTTCCACTTTCTGCTTGAG+AGG | - | chr4_4:73321519-73321538 | Msa0701890:intron | 40.0% |
| ACTCTAGTTGTGCGTTCAAT+TGG | - | chr4_4:73321582-73321601 | Msa0701890:intron | 40.0% | |
| !! | CAGCAATGTTCTGAGAGATA+TGG | - | chr4_4:73321619-73321638 | Msa0701890:intron | 40.0% |
| !! | TTGCTCCATAATTGGCTTTG+TGG | - | chr4_4:73321832-73321851 | Msa0701890:intron | 40.0% |
| ATCAAAGGGATACAAGGTGT+TGG | + | chr4_4:73322039-73322058 | None:intergenic | 40.0% | |
| AGGTAGATCAAAGGGATACA+AGG | + | chr4_4:73322045-73322064 | None:intergenic | 40.0% | |
| ATGGCAGTAGGTAGATCAAA+GGG | + | chr4_4:73322053-73322072 | None:intergenic | 40.0% | |
| AGTAAGGAAATGATGGCAGT+AGG | + | chr4_4:73322065-73322084 | None:intergenic | 40.0% | |
| CCTAAGGAGTAAGGAAATGA+TGG | + | chr4_4:73322072-73322091 | None:intergenic | 40.0% | |
| CCATCATTTCCTTACTCCTT+AGG | - | chr4_4:73322069-73322088 | Msa0701890:intron | 40.0% | |
| !!! | TGATTGAGTTTTCTGGCTGT+AGG | - | chr4_4:73322497-73322516 | Msa0701890:intron | 40.0% |
| !!! | AGTTTTCTGGCTGTAGGTTT+AGG | - | chr4_4:73322503-73322522 | Msa0701890:intron | 40.0% |
| GTAAAGATGACTAACCAACG+GGG | - | chr4_4:73322602-73322621 | Msa0701890:intron | 40.0% | |
| TGAAGTCAGATACCCAATCA+AGG | - | chr4_4:73322625-73322644 | Msa0701890:intron | 40.0% | |
| TTGTCTGATACATTCTCACG+AGG | - | chr4_4:73322661-73322680 | Msa0701890:intron | 40.0% | |
| AACTCGAGAAAATTCGCCAA+AGG | - | chr4_4:73323018-73323037 | Msa0701890:intron | 40.0% | |
| !! | GAAAGATAGTGGAACTAGGA+AGG | + | chr4_4:73323077-73323096 | None:intergenic | 40.0% |
| ! | ATTTGATCGTGCTCGATTTG+GGG | - | chr4_4:73323228-73323247 | Msa0701890:intron | 40.0% |
| CTTAATCCTGCAAAACGACA+AGG | + | chr4_4:73323265-73323284 | None:intergenic | 40.0% | |
| ! | AATTGATGACATGGCGCTTA+AGG | - | chr4_4:73323411-73323430 | Msa0701890:intron | 40.0% |
| AGACAATTATTGTGAGACGG+AGG | - | chr4_4:73323779-73323798 | Msa0701890:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr4_4:73323780-73323799 | Msa0701890:intron | 40.0% | |
| CCCATGACATCTATTAATGC+AGG | + | chr4_4:73323986-73324005 | None:intergenic | 40.0% | |
| GATGTCATGGGTCATATTGA+TGG | - | chr4_4:73323995-73324014 | Msa0701890:intron | 40.0% | |
| TGTCATGGGTCATATTGATG+GGG | - | chr4_4:73323997-73324016 | Msa0701890:intron | 40.0% | |
| CAAGTCATCAGAAACAGAAC+AGG | + | chr4_4:73324045-73324064 | None:intergenic | 40.0% | |
| !!! | ATGCCTCGCTATTTTAATCC+TGG | - | chr4_4:73324096-73324115 | Msa0701890:intron | 40.0% |
| ! | AAAAGGGGAGGTACGAAAAA+CGG | + | chr4_4:73324303-73324322 | None:intergenic | 40.0% |
| AGATACAGTGTTCCGAATTC+AGG | + | chr4_4:73324485-73324504 | None:intergenic | 40.0% | |
| TCTGTCTTACCATACCCATT+TGG | - | chr4_4:73324595-73324614 | Msa0701890:intron | 40.0% | |
| TGAAGTCTGATAACCCATAG+AGG | + | chr4_4:73324658-73324677 | None:intergenic | 40.0% | |
| ! | GGTCTCAACATTTGCTGATA+TGG | - | chr4_4:73324703-73324722 | Msa0701890:CDS | 40.0% |
| TCTGCAGTTCCAAGAAATGA+CGG | + | chr4_4:73324749-73324768 | None:intergenic | 40.0% | |
| ATTTCTTGGAACTGCAGATG+AGG | - | chr4_4:73324751-73324770 | Msa0701890:intron | 40.0% | |
| TTCAAGTGCAGTAAGTGGTT+TGG | - | chr4_4:73324829-73324848 | Msa0701890:intron | 40.0% | |
| TCAAGTGCAGTAAGTGGTTT+GGG | - | chr4_4:73324830-73324849 | Msa0701890:intron | 40.0% | |
| GGCCTAATCTTACATTGTTG+TGG | - | chr4_4:73325099-73325118 | Msa0701890:CDS | 40.0% | |
| CCCCACAACAATGTAAGATT+AGG | + | chr4_4:73325104-73325123 | None:intergenic | 40.0% | |
| TAGGTCTCGTTAATTCTCAG+AGG | - | chr4_4:73325653-73325672 | Msa0701890:intron | 40.0% | |
| TGACTACATGCTTGATGAGA+TGG | - | chr4_4:73325682-73325701 | Msa0701890:intron | 40.0% | |
| TGTGCCAGTAGAATTCACTT+AGG | - | chr4_4:73325837-73325856 | Msa0701890:intron | 40.0% | |
| !!! | CCAGGTTGCCCTTTTTTAAT+AGG | + | chr4_4:73326084-73326103 | None:intergenic | 40.0% |
| CCTATTAAAAAAGGGCAACC+TGG | - | chr4_4:73326081-73326100 | Msa0701890:intron | 40.0% | |
| ! | GGTGGAAACATTTTGTAGTG+TGG | - | chr4_4:73326360-73326379 | Msa0701890:intron | 40.0% |
| CCTTCCATCGTTTGTTTCAA+TGG | + | chr4_4:73326419-73326438 | None:intergenic | 40.0% | |
| CCATTGAAACAAACGATGGA+AGG | - | chr4_4:73326416-73326435 | Msa0701890:intron | 40.0% | |
| AAGGATGGATAGGTTAAGGA+CGG | + | chr4_4:73326462-73326481 | None:intergenic | 40.0% | |
| GAAGAAGGATGGATAGGTTA+AGG | + | chr4_4:73326466-73326485 | None:intergenic | 40.0% | |
| TTCGCAAGAAAGAAGAAGGA+TGG | + | chr4_4:73326477-73326496 | None:intergenic | 40.0% | |
| ! | TTGGTTCGCAAGAAAGAAGA+AGG | + | chr4_4:73326481-73326500 | None:intergenic | 40.0% |
| CCCAACAGAGTCTTCATTAA+TGG | + | chr4_4:73326509-73326528 | None:intergenic | 40.0% | |
| GATGCCATGAAATGGAAACT+TGG | - | chr4_4:73326539-73326558 | Msa0701890:intron | 40.0% | |
| CCAAAAATCTCCTTGACGAT+TGG | + | chr4_4:73326589-73326608 | None:intergenic | 40.0% | |
| ! | CCAATCGTCAAGGAGATTTT+TGG | - | chr4_4:73326586-73326605 | Msa0701890:intron | 40.0% |
| !! | ATCGTCAAGGAGATTTTTGG+GGG | - | chr4_4:73326589-73326608 | Msa0701890:intron | 40.0% |
| ACACAATCTAAGCAACAGTG+AGG | - | chr4_4:73326676-73326695 | Msa0701890:intron | 40.0% | |
| ! | TCTAAGCAACAGTGAGGTTT+TGG | - | chr4_4:73326682-73326701 | Msa0701890:intron | 40.0% |
| ! | CTAAGCAACAGTGAGGTTTT+GGG | - | chr4_4:73326683-73326702 | Msa0701890:intron | 40.0% |
| GTATCGTAAGAATGAACGGT+GGG | + | chr4_4:73326790-73326809 | None:intergenic | 40.0% | |
| AGTATCGTAAGAATGAACGG+TGG | + | chr4_4:73326791-73326810 | None:intergenic | 40.0% | |
| !! | TTGCTACAACTTTAGGATCG+CGG | - | chr4_4:73326926-73326945 | Msa0701890:intron | 40.0% |
| ! | CTTTGTTTGTCTCCTACCTT+TGG | + | chr4_4:73326997-73327016 | None:intergenic | 40.0% |
| GATTGTGCATATAACTAGGG+TGG | - | chr4_4:73327065-73327084 | Msa0701890:intron | 40.0% | |
| TGCATATAACTAGGGTGGTA+AGG | - | chr4_4:73327070-73327089 | Msa0701890:intron | 40.0% | |
| GCATATAACTAGGGTGGTAA+GGG | - | chr4_4:73327071-73327090 | Msa0701890:intron | 40.0% | |
| !! | GTAAGGGCTAGTTACACTAA+TGG | - | chr4_4:73327087-73327106 | Msa0701890:intron | 40.0% |
| ! | TAATTTTGCAACCAGGTCTG+TGG | + | chr4_4:73327373-73327392 | None:intergenic | 40.0% |
| CAGACCTGGTTGCAAAATTA+CGG | - | chr4_4:73327373-73327392 | Msa0701890:intron | 40.0% | |
| AGACCTGGTTGCAAAATTAC+GGG | - | chr4_4:73327374-73327393 | Msa0701890:intron | 40.0% | |
| !! | CTTTAGTTTGTGCAGCATAG+TGG | + | chr4_4:73327404-73327423 | None:intergenic | 40.0% |
| AATTGGCTATTGCCTATGTC+AGG | - | chr4_4:73327448-73327467 | Msa0701890:intron | 40.0% | |
| GTAGCTTCATATCCTGACAT+AGG | + | chr4_4:73327463-73327482 | None:intergenic | 40.0% | |
| CAGCTCATACAACAAAAGTC+AGG | + | chr4_4:73327703-73327722 | None:intergenic | 40.0% | |
| !! | TGCTTGCTATCTTTCCAGTA+CGG | - | chr4_4:73327808-73327827 | Msa0701890:CDS | 40.0% |
| ACTAGAAACAACTTGGAAGC+TGG | - | chr4_4:73327854-73327873 | Msa0701890:intron | 40.0% | |
| GCTTGATCATATCGTCAATC+CGG | + | chr4_4:73328045-73328064 | None:intergenic | 40.0% | |
| TGTTGGTATGGCATTTGAAG+AGG | - | chr4_4:73328160-73328179 | Msa0701890:CDS | 40.0% | |
| ! | TGTTCTTGTCATGCATTGAC+TGG | - | chr4_4:73328334-73328353 | Msa0701890:CDS | 40.0% |
| !! | CAGTTGGATTAGTTGTGGTT+TGG | - | chr4_4:73328550-73328569 | Msa0701890:five_prime_UTR | 40.0% |
| GTGGACAAATACACTTTGCT+TGG | + | chr4_4:73328610-73328629 | None:intergenic | 40.0% | |
| !! | AGACGATACCGTTTTGAGTG+CGG | + | chr4_4:73319604-73319623 | None:intergenic | 45.0% |
| ! | GGTTTTCACGATGTTCGCAA+CGG | + | chr4_4:73319730-73319749 | None:intergenic | 45.0% |
| TTGTACCTTGTCGAGACCAA+CGG | + | chr4_4:73319763-73319782 | None:intergenic | 45.0% | |
| !! | GGTTGAACTTGCTGAACTTC+AGG | - | chr4_4:73320046-73320065 | Msa0701890:intron | 45.0% |
| CAGGATAGAGAAGTTGGAGA+CGG | - | chr4_4:73320065-73320084 | Msa0701890:intron | 45.0% | |
| ! | AGTATCGAAGGTTTGAACCC+TGG | - | chr4_4:73320861-73320880 | Msa0701890:intron | 45.0% |
| GGATTTGGGAAGTAAGTCCA+GGG | + | chr4_4:73320881-73320900 | None:intergenic | 45.0% | |
| AGGATTTGGGAAGTAAGTCC+AGG | + | chr4_4:73320882-73320901 | None:intergenic | 45.0% | |
| ACTACTTGAGCTACACCTTG+GGG | - | chr4_4:73320918-73320937 | Msa0701890:intron | 45.0% | |
| GGAAATAAGACAGGGAACAG+TGG | + | chr4_4:73321022-73321041 | None:intergenic | 45.0% | |
| !! | CTGTTCCCTGTCTTATTTCC+TGG | - | chr4_4:73321022-73321041 | Msa0701890:intron | 45.0% |
| GCTTCCCAGGAAATAAGACA+GGG | + | chr4_4:73321030-73321049 | None:intergenic | 45.0% | |
| TGCTTCCCAGGAAATAAGAC+AGG | + | chr4_4:73321031-73321050 | None:intergenic | 45.0% | |
| !! | ATTTCCTGGGAAGCATTCAG+TGG | - | chr4_4:73321036-73321055 | Msa0701890:intron | 45.0% |
| ! | CACTTGTAGGTTGAGAAGCT+TGG | - | chr4_4:73321145-73321164 | Msa0701890:CDS | 45.0% |
| !! | TATCAGCTTTGAGGACATGC+TGG | + | chr4_4:73321200-73321219 | None:intergenic | 45.0% |
| ATGTCCTCAAAGCTGATAGC+TGG | - | chr4_4:73321202-73321221 | Msa0701890:intron | 45.0% | |
| CTTTCCTCTCAAGCAGAAAG+TGG | + | chr4_4:73321526-73321545 | None:intergenic | 45.0% | |
| CACTTTCTGCTTGAGAGGAA+AGG | - | chr4_4:73321524-73321543 | Msa0701890:intron | 45.0% | |
| ACGTGCCACAAAGCCAATTA+TGG | + | chr4_4:73321840-73321859 | None:intergenic | 45.0% | |
| !! | AATTGGCTTTGTGGCACGTT+AGG | - | chr4_4:73321841-73321860 | Msa0701890:intron | 45.0% |
| GATGGCAGTAGGTAGATCAA+AGG | + | chr4_4:73322054-73322073 | None:intergenic | 45.0% | |
| GTGAAAGCAGTCGTACTGTT+AGG | + | chr4_4:73322106-73322125 | None:intergenic | 45.0% | |
| AATCCCAGTGATGTCGATGT+AGG | - | chr4_4:73322170-73322189 | Msa0701890:intron | 45.0% | |
| CATCCTACATCGACATCACT+GGG | + | chr4_4:73322176-73322195 | None:intergenic | 45.0% | |
| TCATCCTACATCGACATCAC+TGG | + | chr4_4:73322177-73322196 | None:intergenic | 45.0% | |
| ! | TTTGTTGTGGAGAGGGTCAT+TGG | - | chr4_4:73322314-73322333 | Msa0701890:intron | 45.0% |
| GTCAGATACCCAATCAAGGT+TGG | - | chr4_4:73322629-73322648 | Msa0701890:intron | 45.0% | |
| CGTAAGCAAAATAGAGCTGC+AGG | + | chr4_4:73322746-73322765 | None:intergenic | 45.0% | |
| !! | TACCCTAAGAGGCATTCCTT+GGG | + | chr4_4:73322910-73322929 | None:intergenic | 45.0% |
| !! | ATACCCTAAGAGGCATTCCT+TGG | + | chr4_4:73322911-73322930 | None:intergenic | 45.0% |
| ! | CGAATTTTCTCGAGTTCCCT+GGG | + | chr4_4:73323014-73323033 | None:intergenic | 45.0% |
| GTCATGGGTCATATTGATGG+GGG | - | chr4_4:73323998-73324017 | Msa0701890:intron | 45.0% | |
| AAGGCATACCAATGTTGCAC+CGG | + | chr4_4:73324201-73324220 | None:intergenic | 45.0% | |
| AGGTACGAAAAACGGTGCTT+GGG | + | chr4_4:73324295-73324314 | None:intergenic | 45.0% | |
| ! | TTACCATACCCATTTGGCTC+AGG | - | chr4_4:73324601-73324620 | Msa0701890:intron | 45.0% |
| ! | TACCATACCCATTTGGCTCA+GGG | - | chr4_4:73324602-73324621 | Msa0701890:intron | 45.0% |
| TACAAACCCCTGAGCCAAAT+GGG | + | chr4_4:73324612-73324631 | None:intergenic | 45.0% | |
| ATACAAACCCCTGAGCCAAA+TGG | + | chr4_4:73324613-73324632 | None:intergenic | 45.0% | |
| ! | ATTTGCTGATATGGAAGGGG+AGG | - | chr4_4:73324712-73324731 | Msa0701890:CDS | 45.0% |
| AACTGCAGATGAGGTTGTTG+AGG | - | chr4_4:73324760-73324779 | Msa0701890:intron | 45.0% | |
| TCCAGCATCAATGCCAGTAT+GGG | + | chr4_4:73325134-73325153 | None:intergenic | 45.0% | |
| TTCCAGCATCAATGCCAGTA+TGG | + | chr4_4:73325135-73325154 | None:intergenic | 45.0% | |
| GTGTACTTTCCTCACTGTGA+TGG | - | chr4_4:73325286-73325305 | Msa0701890:intron | 45.0% | |
| ATGTAGCTACCATCACAGTG+AGG | + | chr4_4:73325298-73325317 | None:intergenic | 45.0% | |
| ! | AGGGTGCTAATAAAGCCTTG+TGG | - | chr4_4:73325387-73325406 | Msa0701890:intron | 45.0% |
| ! | AATAAAGCCTTGTGGAGTCC+CGG | - | chr4_4:73325395-73325414 | Msa0701890:intron | 45.0% |
| GGCTATGTTTGGATGTTGAG+AGG | - | chr4_4:73325858-73325877 | Msa0701890:intron | 45.0% | |
| !! | TCGTCAAGGAGATTTTTGGG+GGG | - | chr4_4:73326590-73326609 | Msa0701890:intron | 45.0% |
| !! | AGGAGATTTTTGGGGGGATT+CGG | - | chr4_4:73326596-73326615 | Msa0701890:intron | 45.0% |
| ! | ATGTAAATTCAGGTGGTGGC+TGG | - | chr4_4:73326859-73326878 | Msa0701890:CDS | 45.0% |
| GCGATCCTAAAGTTGTAGCA+AGG | + | chr4_4:73326927-73326946 | None:intergenic | 45.0% | |
| !! | TGCTACAACTTTAGGATCGC+GGG | - | chr4_4:73326927-73326946 | Msa0701890:intron | 45.0% |
| ! | GCTTCATCTTTTGTGTCGAG+TGG | - | chr4_4:73327241-73327260 | Msa0701890:intron | 45.0% |
| ! | AAGCCCGTAATTTTGCAACC+AGG | + | chr4_4:73327380-73327399 | None:intergenic | 45.0% |
| !! | TGCGCCTGTGTTGTTTGTTT+GGG | - | chr4_4:73327505-73327524 | Msa0701890:intron | 45.0% |
| !! | TTGCTGTTCTAGTTTCGGCA+TGG | - | chr4_4:73327736-73327755 | Msa0701890:intron | 45.0% |
| !! | TGCTGTTCTAGTTTCGGCAT+GGG | - | chr4_4:73327737-73327756 | Msa0701890:intron | 45.0% |
| !! | GCTTGCTATCTTTCCAGTAC+GGG | - | chr4_4:73327809-73327828 | Msa0701890:CDS | 45.0% |
| CTATCTTTCCAGTACGGGTT+TGG | - | chr4_4:73327814-73327833 | Msa0701890:CDS | 45.0% | |
| TGAAAGATCCAAACCCGTAC+TGG | + | chr4_4:73327825-73327844 | None:intergenic | 45.0% | |
| ACGGGTTTGGATCTTTCAGA+AGG | - | chr4_4:73327827-73327846 | Msa0701890:intron | 45.0% | |
| ! | GCTTGTTAAGGATGAAGGTC+AGG | - | chr4_4:73328063-73328082 | Msa0701890:intron | 45.0% |
| ! | TGCTAGTTCTTGTGTAAGGG+AGG | - | chr4_4:73328123-73328142 | Msa0701890:CDS | 45.0% |
| ! | GCTAGTTCTTGTGTAAGGGA+GGG | - | chr4_4:73328124-73328143 | Msa0701890:CDS | 45.0% |
| GTTTCCAGGCTATGTTGGTA+TGG | - | chr4_4:73328148-73328167 | Msa0701890:CDS | 45.0% | |
| AATGCCATACCAACATAGCC+TGG | + | chr4_4:73328155-73328174 | None:intergenic | 45.0% | |
| ! | ATTACCCTTGATGGTCTTGG+AGG | - | chr4_4:73328194-73328213 | Msa0701890:intron | 45.0% |
| ! | TTACCCTTGATGGTCTTGGA+GGG | - | chr4_4:73328195-73328214 | Msa0701890:intron | 45.0% |
| AACCAAACGCTGCCTTAGAA+AGG | + | chr4_4:73328376-73328395 | None:intergenic | 45.0% | |
| !! | TTTATAAAATTCAATAAATA+AGG | - | chr4_4:73323672-73323691 | Msa0701890:intron | 5.0% |
| !! | TTATAAAATTCAATAAATAA+GGG | - | chr4_4:73323673-73323692 | Msa0701890:intron | 5.0% |
| !!! | ATCAATTTTTATTTATTAAT+AGG | + | chr4_4:73326160-73326179 | None:intergenic | 5.0% |
| CAAGACGTCCGCACTCAAAA+CGG | - | chr4_4:73319593-73319612 | Msa0701890:three_prime_UTR | 50.0% | |
| TTACGGCGAGGAGAGAGAAA+GGG | + | chr4_4:73319647-73319666 | None:intergenic | 50.0% | |
| TAGCAAAAACGGTTACGGCG+AGG | + | chr4_4:73319659-73319678 | None:intergenic | 50.0% | |
| TGTACCTTGTCGAGACCAAC+GGG | + | chr4_4:73319762-73319781 | None:intergenic | 50.0% | |
| AGTTGAACATCCCGCTGCTA+AGG | - | chr4_4:73319933-73319952 | Msa0701890:three_prime_UTR | 50.0% | |
| AGACGAAAAGCTTGCCGTCA+AGG | - | chr4_4:73320448-73320467 | Msa0701890:intron | 50.0% | |
| GAAACCACTGAATGCTTCCC+AGG | + | chr4_4:73321043-73321062 | None:intergenic | 50.0% | |
| ! | CTTTGAGGACATGCTGGTCT+TGG | + | chr4_4:73321194-73321213 | None:intergenic | 50.0% |
| GTCACCAGCTATCAGCTTTG+AGG | + | chr4_4:73321209-73321228 | None:intergenic | 50.0% | |
| AGGAGGATGCCTAAGGAGTA+AGG | + | chr4_4:73322081-73322100 | None:intergenic | 50.0% | |
| TTAGGACAGGAGGATGCCTA+AGG | + | chr4_4:73322088-73322107 | None:intergenic | 50.0% | |
| AGTCGTACTGTTAGGACAGG+AGG | + | chr4_4:73322098-73322117 | None:intergenic | 50.0% | |
| AGCAGTCGTACTGTTAGGAC+AGG | + | chr4_4:73322101-73322120 | None:intergenic | 50.0% | |
| ACGAGGCTTTGCTTTGCTTC+TGG | - | chr4_4:73322678-73322697 | Msa0701890:intron | 50.0% | |
| TGCCCAAGGAATGCCTCTTA+GGG | - | chr4_4:73322905-73322924 | Msa0701890:intron | 50.0% | |
| TTTGCAGGGGATACCCTAAG+AGG | + | chr4_4:73322921-73322940 | None:intergenic | 50.0% | |
| ! | GCGAATTTTCTCGAGTTCCC+TGG | + | chr4_4:73323015-73323034 | None:intergenic | 50.0% |
| TTCGCCAAAGGTAGTCTGTC+TGG | - | chr4_4:73323030-73323049 | Msa0701890:intron | 50.0% | |
| GAAGCCAGACAGACTACCTT+TGG | + | chr4_4:73323037-73323056 | None:intergenic | 50.0% | |
| !!! | CTCTACCCTTGTCGTTTTGC+AGG | - | chr4_4:73323256-73323275 | Msa0701890:CDS | 50.0% |
| ! | CATGTCAGCCTCTCTGAAAG+AGG | + | chr4_4:73323329-73323348 | None:intergenic | 50.0% |
| CAGAGAGGCTGACATGACTA+AGG | - | chr4_4:73323333-73323352 | Msa0701890:CDS | 50.0% | |
| CAATTGCTGTGAGACGTGTG+CGG | - | chr4_4:73324144-73324163 | Msa0701890:intron | 50.0% | |
| CGTCATGTTGCCAAAGCAAC+CGG | - | chr4_4:73324179-73324198 | Msa0701890:intron | 50.0% | |
| !! | CAATGTTGCACCGGTTGCTT+TGG | + | chr4_4:73324192-73324211 | None:intergenic | 50.0% |
| CAAAGCAACCGGTGCAACAT+TGG | - | chr4_4:73324190-73324209 | Msa0701890:intron | 50.0% | |
| GAGGTACGAAAAACGGTGCT+TGG | + | chr4_4:73324296-73324315 | None:intergenic | 50.0% | |
| CAACTGCAGAAGAAAAGGGG+AGG | + | chr4_4:73324315-73324334 | None:intergenic | 50.0% | |
| ! | ACCATACCCATTTGGCTCAG+GGG | - | chr4_4:73324603-73324622 | Msa0701890:intron | 50.0% |
| ! | AGTAAGTGGTTTGGGAGCCA+AGG | - | chr4_4:73324838-73324857 | Msa0701890:intron | 50.0% |
| ! | TGGTTTGGGAGCCAAGGATT+GGG | - | chr4_4:73324844-73324863 | Msa0701890:intron | 50.0% |
| !! | TCCCATACTGGCATTGATGC+TGG | - | chr4_4:73325130-73325149 | Msa0701890:CDS | 50.0% |
| CACTTCTGTGCGGAAAGGTT+GGG | + | chr4_4:73326340-73326359 | None:intergenic | 50.0% | |
| CAACCTTTCCGCACAGAAGT+GGG | - | chr4_4:73326339-73326358 | Msa0701890:intron | 50.0% | |
| TGTTTCCACCCACTTCTGTG+CGG | + | chr4_4:73326350-73326369 | None:intergenic | 50.0% | |
| TTGGGGGGATTCGGAGATAT+TGG | - | chr4_4:73326605-73326624 | Msa0701890:intron | 50.0% | |
| GAACGGTGGGACAGATAAAC+AGG | + | chr4_4:73326777-73326796 | None:intergenic | 50.0% | |
| TGCGTTCTCACAGTCATGCT+TGG | - | chr4_4:73326833-73326852 | Msa0701890:CDS | 50.0% | |
| ! | TAAATTCAGGTGGTGGCTGG+TGG | - | chr4_4:73326862-73326881 | Msa0701890:CDS | 50.0% |
| !! | TGGCAACACTTTTCTGGTGC+AGG | - | chr4_4:73327320-73327339 | Msa0701890:intron | 50.0% |
| !! | GTGCGCCTGTGTTGTTTGTT+TGG | - | chr4_4:73327504-73327523 | Msa0701890:intron | 50.0% |
| TCTCCCTCCAAGACCATCAA+GGG | + | chr4_4:73328201-73328220 | None:intergenic | 50.0% | |
| TTCTCCCTCCAAGACCATCA+AGG | + | chr4_4:73328202-73328221 | None:intergenic | 50.0% | |
| !! | TGCCTTTCTAAGGCAGCGTT+TGG | - | chr4_4:73328371-73328390 | Msa0701890:intron | 50.0% |
| !! | CTAAGGCAGCGTTTGGTTTG+TGG | - | chr4_4:73328378-73328397 | Msa0701890:intron | 50.0% |
| !! | CGTTTTGAGTGCGGACGTCT+TGG | + | chr4_4:73319595-73319614 | None:intergenic | 55.0% |
| TACGGCGAGGAGAGAGAAAG+GGG | + | chr4_4:73319646-73319665 | None:intergenic | 55.0% | |
| GTTACGGCGAGGAGAGAGAA+AGG | + | chr4_4:73319648-73319667 | None:intergenic | 55.0% | |
| AAAACCTCACTCGGTCCCGT+TGG | - | chr4_4:73319744-73319763 | Msa0701890:three_prime_UTR | 55.0% | |
| GGTATCTGACTTCACCCCGT+TGG | + | chr4_4:73322619-73322638 | None:intergenic | 55.0% | |
| AATACTGGACGTGCTGCCCA+AGG | - | chr4_4:73322891-73322910 | Msa0701890:intron | 55.0% | |
| CTGCCCAAGGAATGCCTCTT+AGG | - | chr4_4:73322904-73322923 | Msa0701890:intron | 55.0% | |
| !! | GTGAGACGGAGGGAGTATCT+TGG | - | chr4_4:73323790-73323809 | Msa0701890:intron | 55.0% |
| ACCCCTGAGCCAAATGGGTA+TGG | + | chr4_4:73324607-73324626 | None:intergenic | 55.0% | |
| ! | GTGGTTTGGGAGCCAAGGAT+TGG | - | chr4_4:73324843-73324862 | Msa0701890:intron | 55.0% |
| GTGGGGATGCATTCCCATAC+TGG | - | chr4_4:73325118-73325137 | Msa0701890:CDS | 55.0% | |
| TTCTGATCCGGGACTCCACA+AGG | + | chr4_4:73325405-73325424 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr4_4:73326107-73326126 | Msa0701890:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr4_4:73326108-73326127 | Msa0701890:intron | 55.0% | |
| ! | AATATGGTGGGACCCCTTCC+CGG | + | chr4_4:73326135-73326154 | None:intergenic | 55.0% |
| CCACTTCTGTGCGGAAAGGT+TGG | + | chr4_4:73326341-73326360 | None:intergenic | 55.0% | |
| CCAACCTTTCCGCACAGAAG+TGG | - | chr4_4:73326338-73326357 | Msa0701890:intron | 55.0% | |
| !! | GCTTGCTGTCAATGCTGCCA+AGG | - | chr4_4:73327344-73327363 | Msa0701890:intron | 55.0% |
| AACCAGGTCTGTGGCATCCT+TGG | + | chr4_4:73327364-73327383 | None:intergenic | 55.0% | |
| ! | AGGGCGTTTCCAGGCTATGT+TGG | - | chr4_4:73328143-73328162 | Msa0701890:CDS | 55.0% |
| ATCTCCGGCGAACGCCAATC+CGG | - | chr4_4:73319569-73319588 | Msa0701890:three_prime_UTR | 60.0% | |
| TTGAGTGCGGACGTCTTGGC+CGG | + | chr4_4:73319591-73319610 | None:intergenic | 60.0% | |
| ACGGCGAGGAGAGAGAAAGG+GGG | + | chr4_4:73319645-73319664 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr4_4:73326119-73326138 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr4_4:73326120-73326139 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr4_4:73326119-73326138 | Msa0701890:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr4_4:73326120-73326139 | Msa0701890:intron | 60.0% | |
| CCACCCACTTCTGTGCGGAA+AGG | + | chr4_4:73326345-73326364 | None:intergenic | 60.0% | |
| CCTTTCCGCACAGAAGTGGG+TGG | - | chr4_4:73326342-73326361 | Msa0701890:intron | 60.0% | |
| ! | ATTCAGGTGGTGGCTGGTGG+AGG | - | chr4_4:73326865-73326884 | Msa0701890:CDS | 60.0% |
| TGCCAAGGATGCCACAGACC+TGG | - | chr4_4:73327359-73327378 | Msa0701890:intron | 60.0% | |
| !! | GTGTAAGGGAGGGCGTTTCC+AGG | - | chr4_4:73328134-73328153 | Msa0701890:CDS | 60.0% |
| TGGCGTTCGCCGGAGATGTC+AGG | + | chr4_4:73319566-73319585 | None:intergenic | 65.0% | |
| !! | TTGGCCGGATTGGCGTTCGC+CGG | + | chr4_4:73319576-73319595 | None:intergenic | 65.0% |
| TGCGGACGTCTTGGCCGGAT+TGG | + | chr4_4:73319586-73319605 | None:intergenic | 65.0% | |
| GGGGGGGAGAGAGAGAGAGA+GGG | + | chr4_4:73319627-73319646 | None:intergenic | 65.0% | |
| AGGGGGGGAGAGAGAGAGAG+AGG | + | chr4_4:73319628-73319647 | None:intergenic | 65.0% | |
| GGCGAGGAGAGAGAAAGGGG+GGG | + | chr4_4:73319643-73319662 | None:intergenic | 65.0% | |
| CGGCGAGGAGAGAGAAAGGG+GGG | + | chr4_4:73319644-73319663 | None:intergenic | 65.0% | |
| GAGACCAACGGGACCGAGTG+AGG | + | chr4_4:73319751-73319770 | None:intergenic | 65.0% | |
| ! | CGGTCCCGTTGGTCTCGACA+AGG | - | chr4_4:73319755-73319774 | Msa0701890:three_prime_UTR | 65.0% |
| TGCGGGAGCTTCAGTGCACC+AGG | + | chr4_4:73326102-73326121 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr4_4:73326113-73326132 | Msa0701890:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr4_4:73326114-73326133 | Msa0701890:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr4_4:73326118-73326137 | Msa0701890:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 73319421 | 73328654 | 73319421 | ID=Msa0701890;Name=Msa0701890 |
| chr4_4 | mRNA | 73319421 | 73328654 | 73319421 | ID=Msa0701890-mRNA-1;Parent=Msa0701890;Name=Msa0701890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=121|1|1|1|1|1|17|561|544 |
| chr4_4 | exon | 73319421 | 73320062 | 73319421 | ID=Msa0701890-mRNA-1:exon:22539;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73320159 | 73320249 | 73320159 | ID=Msa0701890-mRNA-1:exon:22538;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73320630 | 73320733 | 73320630 | ID=Msa0701890-mRNA-1:exon:22537;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73321076 | 73321204 | 73321076 | ID=Msa0701890-mRNA-1:exon:22536;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73322315 | 73322419 | 73322315 | ID=Msa0701890-mRNA-1:exon:22535;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73323237 | 73323371 | 73323237 | ID=Msa0701890-mRNA-1:exon:22534;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73323864 | 73323950 | 73323864 | ID=Msa0701890-mRNA-1:exon:22533;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73324643 | 73324739 | 73324643 | ID=Msa0701890-mRNA-1:exon:22532;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73325036 | 73325253 | 73325036 | ID=Msa0701890-mRNA-1:exon:22531;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73325429 | 73325494 | 73325429 | ID=Msa0701890-mRNA-1:exon:22530;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73326826 | 73326921 | 73326826 | ID=Msa0701890-mRNA-1:exon:22529;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73327606 | 73327656 | 73327606 | ID=Msa0701890-mRNA-1:exon:22528;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73327781 | 73327840 | 73327781 | ID=Msa0701890-mRNA-1:exon:22527;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73327948 | 73328034 | 73327948 | ID=Msa0701890-mRNA-1:exon:22526;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73328121 | 73328210 | 73328121 | ID=Msa0701890-mRNA-1:exon:22525;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73328299 | 73328363 | 73328299 | ID=Msa0701890-mRNA-1:exon:22524;Parent=Msa0701890-mRNA-1 |
| chr4_4 | exon | 73328461 | 73328654 | 73328461 | ID=Msa0701890-mRNA-1:exon:22523;Parent=Msa0701890-mRNA-1 |
| chr4_4 | five_prime_UTR | 73328534 | 73328654 | 73328534 | ID=Msa0701890-mRNA-1:five_prime_utr;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73328461 | 73328533 | 73328461 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73328299 | 73328363 | 73328299 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73328121 | 73328210 | 73328121 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73327948 | 73328034 | 73327948 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73327781 | 73327840 | 73327781 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73327606 | 73327656 | 73327606 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73326826 | 73326921 | 73326826 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73325429 | 73325494 | 73325429 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73325036 | 73325253 | 73325036 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73324643 | 73324739 | 73324643 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73323864 | 73323950 | 73323864 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73323237 | 73323371 | 73323237 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73322315 | 73322419 | 73322315 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73321076 | 73321204 | 73321076 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73320630 | 73320733 | 73320630 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73320159 | 73320249 | 73320159 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | CDS | 73319982 | 73320062 | 73319982 | ID=Msa0701890-mRNA-1:cds;Parent=Msa0701890-mRNA-1 |
| chr4_4 | three_prime_UTR | 73319421 | 73319981 | 73319421 | ID=Msa0701890-mRNA-1:three_prime_utr;Parent=Msa0701890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
