Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387960 | XP_024630487.1 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387960 | sp|Q9C6S5|PHSB_ARATH | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387960 | A0A396IMD5 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1351190 | Msa1387960 | 0.994894 | 3.844464e-211 | -8.615850e-47 |
| Msa1387960 | Msa1433660 | 0.901131 | 3.654255e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387960 | MtrunA17_Chr3g0094551 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Msa1387960 | MtrunA17_Chr5g0409251 | 79.526 | 464 | 92 | 2 | 1 | 463 | 14 | 475 | 0.0 | 755 |
| Msa1387960 | MtrunA17_Chr1g0211371 | 71.397 | 451 | 129 | 0 | 2 | 452 | 9 | 459 | 0.0 | 666 |
| Msa1387960 | MtrunA17_Chr5g0393681 | 54.897 | 439 | 196 | 2 | 18 | 455 | 9 | 446 | 2.36e-168 | 483 |
| Msa1387960 | MtrunA17_Chr8g0378551 | 48.966 | 435 | 219 | 2 | 13 | 444 | 34 | 468 | 8.19e-150 | 435 |
| Msa1387960 | MtrunA17_Chr5g0426641 | 47.846 | 441 | 227 | 2 | 14 | 451 | 20 | 460 | 6.60e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387960 | AT1G31830.1 | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Msa1387960 | AT1G31830.2 | 70.779 | 462 | 132 | 2 | 5 | 463 | 18 | 479 | 0.0 | 687 |
| Msa1387960 | AT5G05630.1 | 70.460 | 457 | 130 | 2 | 1 | 452 | 32 | 488 | 0.0 | 665 |
| Msa1387960 | AT1G31820.1 | 63.755 | 458 | 164 | 1 | 8 | 463 | 25 | 482 | 0.0 | 603 |
| Msa1387960 | AT3G19553.1 | 57.944 | 428 | 178 | 2 | 18 | 443 | 21 | 448 | 5.39e-177 | 504 |
| Msa1387960 | AT3G13620.1 | 45.770 | 461 | 244 | 3 | 5 | 459 | 12 | 472 | 5.67e-143 | 418 |
Find 105 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTCTTGTACTCTTT+TGG | 0.164145 | tig0021024:+20178 | Msa1387960:CDS |
| GGTCCTCTCTTAACCCTTCT+TGG | 0.208029 | tig0021024:+19257 | Msa1387960:CDS |
| ATCAGCTTTAGGACCTTATT+GGG | 0.221976 | tig0021024:+19382 | Msa1387960:CDS |
| TCAGGGATACTCCATATAAA+TGG | 0.230173 | tig0021024:-19293 | Msa1387960:intergenic |
| GTTTGGGTTTCATCAGCTTT+AGG | 0.243950 | tig0021024:+19371 | Msa1387960:CDS |
| TGCAGCTGCGGTGTCGAATA+TGG | 0.255598 | tig0021024:+19973 | Msa1387960:CDS |
| CATCAGCTTTAGGACCTTAT+TGG | 0.283142 | tig0021024:+19381 | Msa1387960:CDS |
| GCCGACTCATTTCAGCTTCT+AGG | 0.293315 | tig0021024:+20019 | Msa1387960:CDS |
| AAAACAGTGGTTATGTTGTT+TGG | 0.310011 | tig0021024:+19354 | Msa1387960:CDS |
| CGCTACGGTACGCCTATTAT+AGG | 0.318281 | tig0021024:+20088 | Msa1387960:CDS |
| TCCAACAAGGTTGGATGAAA+TGG | 0.322758 | tig0021024:+19408 | Msa1387960:CDS |
| TCCATTTCATCCAACCTTGT+TGG | 0.334475 | tig0021024:-19409 | Msa1387960:intergenic |
| TGGATTTAAAAGATATTGAT+TGG | 0.335722 | tig0021024:+19690 | Msa1387960:CDS |
| AAATGCATCAAGGCCTTATA+AGG | 0.337429 | tig0021024:+20249 | Msa1387960:CDS |
| TCAGCAGTGATCAAGGCTTC+AGG | 0.339235 | tig0021024:-19311 | Msa1387960:intergenic |
| TCCACTTCAACCCATCTTGA+TGG | 0.351473 | tig0021024:-19671 | Msa1387960:intergenic |
| TCAGATATTGCTATGATCAT+TGG | 0.351597 | tig0021024:+19920 | Msa1387960:CDS |
| AAGTGGCTGGCCTAGAGTTT+TGG | 0.352088 | tig0021024:+19508 | Msa1387960:CDS |
| TTATAAGGCCTTGATGCATT+TGG | 0.365218 | tig0021024:-20247 | Msa1387960:intergenic |
| TTGGTTTGTTGGTGTGGTAC+TGG | 0.372779 | tig0021024:-19141 | Msa1387960:intergenic |
| AAAGCATAAAACAAACCTTT+AGG | 0.375897 | tig0021024:-19806 | Msa1387960:intergenic |
| ACCTACCTGATCTGGACAAT+GGG | 0.376715 | tig0021024:+20461 | Msa1387960:CDS |
| CATCTTGATGGTTCCAACTT+AGG | 0.382965 | tig0021024:-19659 | Msa1387960:intergenic |
| ATTTATTTCAATTCCTAAGT+TGG | 0.384356 | tig0021024:+19646 | Msa1387960:CDS |
| TATAGAGGTTTAACTATTGT+TGG | 0.385829 | tig0021024:+19569 | Msa1387960:CDS |
| TTCCAGTGGACCGCGCGGCT+TGG | 0.391262 | tig0021024:+19882 | Msa1387960:CDS |
| GCTACGGTACGCCTATTATA+GGG | 0.396902 | tig0021024:+20089 | Msa1387960:CDS |
| GAAGTGTCTGGAGGACCATT+TGG | 0.412620 | tig0021024:+19209 | Msa1387960:CDS |
| AAACAGTGGTTATGTTGTTT+GGG | 0.414591 | tig0021024:+19355 | Msa1387960:CDS |
| CTCTCCCCATTGTCCAGATC+AGG | 0.418939 | tig0021024:-20466 | Msa1387960:intergenic |
| ATCCCACCTACAATATTGAT+TGG | 0.423497 | tig0021024:+20307 | Msa1387960:CDS |
| AGCCTTGATCACTGCTGAAA+TGG | 0.423748 | tig0021024:+19316 | Msa1387960:CDS |
| AGATAATCAAGAAACAAAAC+TGG | 0.424322 | tig0021024:-19461 | Msa1387960:intergenic |
| ATCATCTTCTATGAAGTGTC+TGG | 0.425953 | tig0021024:+19197 | Msa1387960:CDS |
| CCTTGTTGGAAACCCCAATA+AGG | 0.431314 | tig0021024:-19395 | Msa1387960:intergenic |
| ACAAAACCAATCAATATTGT+AGG | 0.447741 | tig0021024:-20313 | Msa1387960:intergenic |
| TCCCATTTCAGCAGTGATCA+AGG | 0.449929 | tig0021024:-19318 | Msa1387960:intergenic |
| GGCCAGCCACTTTCTAAAGC+TGG | 0.452471 | tig0021024:-19497 | Msa1387960:intergenic |
| GATTCTATAAGTACTCTTGT+TGG | 0.458007 | tig0021024:+19755 | Msa1387960:CDS |
| CAGGGATACTCCATATAAAT+GGG | 0.460294 | tig0021024:-19292 | Msa1387960:intergenic |
| CTATGATCATTGGTGGAGCT+TGG | 0.461415 | tig0021024:+19930 | Msa1387960:CDS |
| CTCTCCACAAATTTGAGACA+AGG | 0.466334 | tig0021024:-20406 | Msa1387960:intergenic |
| CCGACTCATTTCAGCTTCTA+GGG | 0.471267 | tig0021024:+20020 | Msa1387960:CDS |
| ATAAATCCCATAACAACAAA+AGG | 0.475766 | tig0021024:-19629 | Msa1387960:intergenic |
| TAGTCCTGACCTACCTGATC+TGG | 0.476702 | tig0021024:+20453 | Msa1387960:CDS |
| CTTGATTTGGTTTGTTGGTG+TGG | 0.478422 | tig0021024:-19147 | Msa1387960:intergenic |
| GCCTTGATCACTGCTGAAAT+GGG | 0.479371 | tig0021024:+19317 | Msa1387960:CDS |
| ACTATTCCAGCTTTAGAAAG+TGG | 0.483127 | tig0021024:+19491 | Msa1387960:CDS |
| GCAGCCTTGTCTCAAATTTG+TGG | 0.484308 | tig0021024:+20402 | Msa1387960:CDS |
| TGCCTGAGTTCTTTACCAAA+AGG | 0.486374 | tig0021024:+20062 | Msa1387960:CDS |
| ATCAAGGCCTTATAAGGTAC+CGG | 0.487574 | tig0021024:+20255 | Msa1387960:CDS |
| TTGTCCAGATCAGGTAGGTC+AGG | 0.487753 | tig0021024:-20457 | Msa1387960:intergenic |
| CCTAATGTTGCCAAAACTCT+AGG | 0.494283 | tig0021024:-19518 | Msa1387960:intergenic |
| TTCCAGCTTTAGAAAGTGGC+TGG | 0.498721 | tig0021024:+19495 | Msa1387960:CDS |
| GACCGCGCGGCTTGGAGTGA+CGG | 0.505316 | tig0021024:+19890 | Msa1387960:CDS |
| CCTTATTGGGGTTTCCAACA+AGG | 0.506446 | tig0021024:+19395 | Msa1387960:CDS |
| CCAAGGAAAACACTTCCTAA+AGG | 0.513941 | tig0021024:+19791 | Msa1387960:CDS |
| AGTGTCATTGCTATGGTGAT+TGG | 0.514324 | tig0021024:+20370 | Msa1387960:CDS |
| GATATTGCTATGATCATTGG+TGG | 0.514890 | tig0021024:+19923 | Msa1387960:CDS |
| CTCATTTCAGCTTCTAGGGA+TGG | 0.515121 | tig0021024:+20024 | Msa1387960:CDS |
| CAGCAGTGATCAAGGCTTCA+GGG | 0.515674 | tig0021024:-19310 | Msa1387960:intergenic |
| ATTGGGGTTTCCAACAAGGT+TGG | 0.521088 | tig0021024:+19399 | Msa1387960:CDS |
| GCAGCTGCGGTGTCGAATAT+GGG | 0.523410 | tig0021024:+19974 | Msa1387960:CDS |
| TTGGTGGAGCTTGGTTGAGA+TGG | 0.527133 | tig0021024:+19939 | Msa1387960:CDS |
| TGTTATAAGTGTCATTGCTA+TGG | 0.529506 | tig0021024:+20363 | Msa1387960:CDS |
| TGGCACCGGCGCGGTTCCAG+TGG | 0.532048 | tig0021024:+19868 | Msa1387960:CDS |
| AAACCAATCAATATTGTAGG+TGG | 0.533397 | tig0021024:-20310 | Msa1387960:intergenic |
| GCTTCTAGGGATGGCTGAGA+GGG | 0.533973 | tig0021024:+20033 | Msa1387960:CDS |
| ACCGCGCGGCTTGGAGTGAC+GGG | 0.534962 | tig0021024:+19891 | Msa1387960:CDS |
| GTGGAGCTTGGTTGAGATGG+TGG | 0.535569 | tig0021024:+19942 | Msa1387960:CDS |
| GGAAAACTATGAATCCAAGA+AGG | 0.537053 | tig0021024:-19271 | Msa1387960:intergenic |
| ACTGCATCCTCTGAACCAAA+TGG | 0.544541 | tig0021024:-19224 | Msa1387960:intergenic |
| TTGGTGAAGTTGAAAATCCA+AGG | 0.544668 | tig0021024:+19774 | Msa1387960:CDS |
| TGGAGGACCATTTGGTTCAG+AGG | 0.551347 | tig0021024:+19217 | Msa1387960:CDS |
| TAAGTTGGAACCATCAAGAT+GGG | 0.561659 | tig0021024:+19661 | Msa1387960:CDS |
| GAGGATGCAGTAAAAGCAGC+TGG | 0.564248 | tig0021024:+19236 | Msa1387960:CDS |
| ACCATCAAGATGGGTTGAAG+TGG | 0.565642 | tig0021024:+19670 | Msa1387960:CDS |
| GGTTGGATGAAATGGATTAG+TGG | 0.567663 | tig0021024:+19416 | Msa1387960:CDS |
| AATTTGTGGAGAGAAAGAAA+TGG | 0.574720 | tig0021024:+20416 | Msa1387960:CDS |
| TGGGGAGAGCACACAAACAT+TGG | 0.574767 | tig0021024:+20480 | Msa1387960:CDS |
| CTAAGTTGGAACCATCAAGA+TGG | 0.579540 | tig0021024:+19660 | Msa1387960:CDS |
| TTTGTTGGTGTGGTACTGGT+AGG | 0.580564 | tig0021024:-19137 | Msa1387960:intergenic |
| TTTACCAAAAGGTCGCGCTA+CGG | 0.586063 | tig0021024:+20073 | Msa1387960:CDS |
| CCCTAGAAGCTGAAATGAGT+CGG | 0.588600 | tig0021024:-20020 | Msa1387960:intergenic |
| GTGGCTTAATGCTGCAGCTG+CGG | 0.592462 | tig0021024:+19961 | Msa1387960:CDS |
| GACCTACCTGATCTGGACAA+TGG | 0.594367 | tig0021024:+20460 | Msa1387960:CDS |
| AGCTTCTAGGGATGGCTGAG+AGG | 0.595536 | tig0021024:+20032 | Msa1387960:CDS |
| TAGAAGATGATGAAGATGAG+AGG | 0.601071 | tig0021024:-19185 | Msa1387960:intergenic |
| TCAGCTTTAGGACCTTATTG+GGG | 0.602003 | tig0021024:+19383 | Msa1387960:CDS |
| TCAAGGCCTTATAAGGTACC+GGG | 0.605703 | tig0021024:+20256 | Msa1387960:CDS |
| AACCAATCAATATTGTAGGT+GGG | 0.606006 | tig0021024:-20309 | Msa1387960:intergenic |
| GAAAACTATGAATCCAAGAA+GGG | 0.606263 | tig0021024:-19270 | Msa1387960:intergenic |
| ATCTTCTATGAAGTGTCTGG+AGG | 0.631099 | tig0021024:+19200 | Msa1387960:CDS |
| CGCGGTTCCAGTGGACCGCG+CGG | 0.639341 | tig0021024:+19877 | Msa1387960:CDS |
| AATCCAAGAAGGGTTAAGAG+AGG | 0.667612 | tig0021024:-19260 | Msa1387960:intergenic |
| CTTCTAGGGATGGCTGAGAG+GGG | 0.668163 | tig0021024:+20034 | Msa1387960:CDS |
| AAGGCCTTATAAGGTACCGG+GGG | 0.671895 | tig0021024:+20258 | Msa1387960:CDS |
| TGAAAGTAAAATCACACCGG+AGG | 0.691386 | tig0021024:-20125 | Msa1387960:intergenic |
| CCATGAAAGTAAAATCACAC+CGG | 0.697705 | tig0021024:-20128 | Msa1387960:intergenic |
| CCCCATTGTCCAGATCAGGT+AGG | 0.702852 | tig0021024:-20462 | Msa1387960:intergenic |
| ACCCGTCACTCCAAGCCGCG+CGG | 0.707480 | tig0021024:-19892 | Msa1387960:intergenic |
| CAAGGCCTTATAAGGTACCG+GGG | 0.713763 | tig0021024:+20257 | Msa1387960:CDS |
| CCTACCTGATCTGGACAATG+GGG | 0.745924 | tig0021024:+20462 | Msa1387960:CDS |
| ACAATGTTCCCTGAAAACAG+TGG | 0.765904 | tig0021024:+19341 | Msa1387960:CDS |
| AGGCCTTATAAGGTACCGGG+GGG | 0.789499 | tig0021024:+20259 | Msa1387960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0021024:19163-19182 | Msa1351980:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0021024:19554-19573 | Msa1387960:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0021024:19646-19665 | Msa1387960:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0021024:19690-19709 | Msa1387960:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0021024:19717-19736 | Msa1387960:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0021024:19732-19751 | Msa1387960:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0021024:19733-19752 | Msa1387960:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0021024:19814-19833 | Msa1387960:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0021024:20102-20121 | Msa1387960:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0021024:20318-20337 | Msa1387960:CDS | 20.0% |
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0021024:19163-19182 | Msa1387960:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0021024:19554-19573 | Msa1387960:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0021024:19646-19665 | Msa1387960:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0021024:19690-19709 | Msa1387960:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0021024:19717-19736 | Msa1387960:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0021024:19732-19751 | Msa1387960:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0021024:19733-19752 | Msa1387960:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0021024:19814-19833 | Msa1387960:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0021024:20102-20121 | Msa1387960:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0021024:20318-20337 | Msa1387960:CDS | 20.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0021024:19155-19174 | Msa1351980:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0021024:19282-19301 | Msa1387960:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0021024:19464-19483 | Msa1387960:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0021024:19569-19588 | Msa1387960:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0021024:19623-19642 | Msa1387960:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0021024:19632-19651 | Msa1387960:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0021024:19809-19828 | Msa1387960:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0021024:20103-20122 | Msa1387960:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0021024:20178-20197 | Msa1387960:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0021024:20239-20258 | Msa1387960:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0021024:20316-20335 | Msa1387960:intergenic | 25.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0021024:19155-19174 | Msa1387960:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0021024:19282-19301 | Msa1387960:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0021024:19464-19483 | Msa1387960:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0021024:19569-19588 | Msa1387960:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0021024:19623-19642 | Msa1387960:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0021024:19632-19651 | Msa1387960:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0021024:19809-19828 | Msa1387960:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0021024:20103-20122 | Msa1387960:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0021024:20178-20197 | Msa1387960:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0021024:20239-20258 | Msa1387960:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0021024:20316-20335 | Msa1387960:intergenic | 25.0% |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0021024:19273-19292 | Msa1387960:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0021024:19354-19373 | Msa1387960:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0021024:19355-19374 | Msa1387960:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0021024:19591-19610 | Msa1387960:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0021024:19622-19641 | Msa1387960:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0021024:19755-19774 | Msa1387960:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0021024:19825-19844 | Msa1387960:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0021024:19848-19867 | Msa1387960:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0021024:19920-19939 | Msa1387960:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0021024:20150-20169 | Msa1387960:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0021024:20312-20331 | Msa1387960:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0021024:20313-20332 | Msa1387960:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0021024:20363-20382 | Msa1387960:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0021024:20416-20435 | Msa1387960:CDS | 30.0% | |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0021024:19273-19292 | Msa1387960:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0021024:19354-19373 | Msa1387960:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0021024:19355-19374 | Msa1387960:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0021024:19591-19610 | Msa1387960:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0021024:19622-19641 | Msa1387960:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0021024:19755-19774 | Msa1387960:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0021024:19825-19844 | Msa1387960:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0021024:19848-19867 | Msa1387960:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0021024:19920-19939 | Msa1387960:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0021024:20150-20169 | Msa1387960:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0021024:20312-20331 | Msa1387960:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0021024:20313-20332 | Msa1387960:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0021024:20363-20382 | Msa1387960:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0021024:20416-20435 | Msa1387960:CDS | 30.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0021024:19188-19207 | Msa1351980:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0021024:19197-19216 | Msa1387960:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0021024:19274-19293 | Msa1387960:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0021024:19295-19314 | Msa1387960:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0021024:19296-19315 | Msa1387960:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0021024:19352-19371 | Msa1387960:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0021024:19353-19372 | Msa1387960:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0021024:19382-19401 | Msa1387960:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0021024:19491-19510 | Msa1387960:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0021024:19590-19609 | Msa1387960:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0021024:19661-19680 | Msa1387960:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0021024:19774-19793 | Msa1387960:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0021024:19824-19843 | Msa1387960:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0021024:19923-19942 | Msa1387960:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0021024:20131-20150 | Msa1387960:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0021024:20250-20269 | Msa1387960:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0021024:20249-20268 | Msa1387960:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0021024:20307-20326 | Msa1387960:CDS | 35.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0021024:19188-19207 | Msa1387960:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0021024:19197-19216 | Msa1387960:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0021024:19274-19293 | Msa1387960:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0021024:19295-19314 | Msa1387960:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0021024:19296-19315 | Msa1387960:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0021024:19352-19371 | Msa1387960:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0021024:19353-19372 | Msa1387960:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0021024:19382-19401 | Msa1387960:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0021024:19491-19510 | Msa1387960:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0021024:19590-19609 | Msa1387960:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0021024:19661-19680 | Msa1387960:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0021024:19774-19793 | Msa1387960:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0021024:19824-19843 | Msa1387960:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0021024:19923-19942 | Msa1387960:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0021024:20131-20150 | Msa1387960:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0021024:20250-20269 | Msa1387960:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0021024:20249-20268 | Msa1387960:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0021024:20307-20326 | Msa1387960:CDS | 35.0% | |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0021024:19150-19169 | Msa1351980:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0021024:19200-19219 | Msa1387960:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0021024:19263-19282 | Msa1387960:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0021024:19341-19360 | Msa1387960:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0021024:19371-19390 | Msa1387960:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0021024:19381-19400 | Msa1387960:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0021024:19383-19402 | Msa1387960:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0021024:19408-19427 | Msa1387960:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0021024:19412-19431 | Msa1387960:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0021024:19416-19435 | Msa1387960:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0021024:19521-19540 | Msa1387960:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0021024:19518-19537 | Msa1387960:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0021024:19662-19681 | Msa1387960:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0021024:19660-19679 | Msa1387960:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0021024:19794-19813 | Msa1387960:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0021024:19791-19810 | Msa1387960:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0021024:19854-19873 | Msa1387960:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0021024:20062-20081 | Msa1387960:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0021024:20067-20086 | Msa1387960:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0021024:20128-20147 | Msa1387960:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0021024:20128-20147 | Msa1387960:CDS | 40.0% |
| ! | ATCAAGGCCTTATAAGGTAC+CGG | + | tig0021024:20255-20274 | Msa1387960:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0021024:20370-20389 | Msa1387960:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0021024:20409-20428 | Msa1387960:intergenic | 40.0% |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0021024:19150-19169 | Msa1387960:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0021024:19200-19219 | Msa1387960:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0021024:19263-19282 | Msa1387960:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0021024:19341-19360 | Msa1387960:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0021024:19371-19390 | Msa1387960:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0021024:19381-19400 | Msa1387960:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0021024:19383-19402 | Msa1387960:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0021024:19408-19427 | Msa1387960:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0021024:19412-19431 | Msa1387960:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0021024:19416-19435 | Msa1387960:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0021024:19521-19540 | Msa1387960:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0021024:19518-19537 | Msa1387960:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0021024:19662-19681 | Msa1387960:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0021024:19660-19679 | Msa1387960:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0021024:19794-19813 | Msa1387960:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0021024:19791-19810 | Msa1387960:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0021024:19854-19873 | Msa1387960:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0021024:20062-20081 | Msa1387960:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0021024:20067-20086 | Msa1387960:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0021024:20128-20147 | Msa1387960:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0021024:20128-20147 | Msa1387960:CDS | 40.0% |
| ! | ATCAAGGCCTTATAAGGTAC+CGG | + | tig0021024:20255-20274 | Msa1387960:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0021024:20370-20389 | Msa1387960:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0021024:20409-20428 | Msa1387960:intergenic | 40.0% |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0021024:19140-19159 | Msa1351980:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0021024:19144-19163 | Msa1351980:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0021024:19227-19246 | Msa1387960:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0021024:19316-19335 | Msa1387960:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0021024:19317-19336 | Msa1387960:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0021024:19321-19340 | Msa1387960:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0021024:19398-19417 | Msa1387960:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0021024:19395-19414 | Msa1387960:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0021024:19399-19418 | Msa1387960:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0021024:19495-19514 | Msa1387960:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0021024:19670-19689 | Msa1387960:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0021024:19674-19693 | Msa1387960:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0021024:19930-19949 | Msa1387960:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0021024:20023-20042 | Msa1387960:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0021024:20020-20039 | Msa1387960:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0021024:20024-20043 | Msa1387960:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0021024:20073-20092 | Msa1387960:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0021024:20089-20108 | Msa1387960:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+GGG | + | tig0021024:20256-20275 | Msa1387960:CDS | 45.0% |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0021024:20402-20421 | Msa1387960:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0021024:20461-20480 | Msa1387960:CDS | 45.0% | |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0021024:19140-19159 | Msa1387960:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0021024:19144-19163 | Msa1387960:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0021024:19227-19246 | Msa1387960:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0021024:19316-19335 | Msa1387960:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0021024:19317-19336 | Msa1387960:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0021024:19321-19340 | Msa1387960:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0021024:19398-19417 | Msa1387960:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0021024:19395-19414 | Msa1387960:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0021024:19399-19418 | Msa1387960:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0021024:19495-19514 | Msa1387960:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0021024:19670-19689 | Msa1387960:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0021024:19674-19693 | Msa1387960:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0021024:19930-19949 | Msa1387960:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0021024:20023-20042 | Msa1387960:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0021024:20020-20039 | Msa1387960:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0021024:20024-20043 | Msa1387960:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0021024:20073-20092 | Msa1387960:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0021024:20089-20108 | Msa1387960:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+GGG | + | tig0021024:20256-20275 | Msa1387960:CDS | 45.0% |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0021024:20402-20421 | Msa1387960:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0021024:20461-20480 | Msa1387960:CDS | 45.0% | |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0021024:19209-19228 | Msa1387960:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0021024:19217-19236 | Msa1387960:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0021024:19236-19255 | Msa1387960:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0021024:19257-19276 | Msa1387960:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0021024:19313-19332 | Msa1387960:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0021024:19314-19333 | Msa1387960:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0021024:19508-19527 | Msa1387960:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0021024:19939-19958 | Msa1387960:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0021024:20019-20038 | Msa1387960:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0021024:20088-20107 | Msa1387960:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0021024:20109-20128 | Msa1387960:CDS | 50.0% |
| !! | CAAGGCCTTATAAGGTACCG+GGG | + | tig0021024:20257-20276 | Msa1387960:CDS | 50.0% |
| !! | AAGGCCTTATAAGGTACCGG+GGG | + | tig0021024:20258-20277 | Msa1387960:CDS | 50.0% |
| TTACCCCCCGGTACCTTATA+AGG | - | tig0021024:20265-20284 | Msa1387960:intergenic | 50.0% | |
| ATTGCTCCAACTTTACCCCC+CGG | - | tig0021024:20277-20296 | Msa1387960:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0021024:20453-20472 | Msa1387960:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0021024:20460-20479 | Msa1387960:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0021024:20460-20479 | Msa1387960:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0021024:20462-20481 | Msa1387960:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0021024:20480-20499 | Msa1387960:CDS | 50.0% |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0021024:19209-19228 | Msa1387960:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0021024:19217-19236 | Msa1387960:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0021024:19236-19255 | Msa1387960:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0021024:19257-19276 | Msa1387960:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0021024:19313-19332 | Msa1387960:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0021024:19314-19333 | Msa1387960:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0021024:19508-19527 | Msa1387960:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0021024:19939-19958 | Msa1387960:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0021024:20019-20038 | Msa1387960:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0021024:20088-20107 | Msa1387960:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0021024:20109-20128 | Msa1387960:CDS | 50.0% |
| !! | CAAGGCCTTATAAGGTACCG+GGG | + | tig0021024:20257-20276 | Msa1387960:CDS | 50.0% |
| !! | AAGGCCTTATAAGGTACCGG+GGG | + | tig0021024:20258-20277 | Msa1387960:CDS | 50.0% |
| TTACCCCCCGGTACCTTATA+AGG | - | tig0021024:20265-20284 | Msa1387960:intergenic | 50.0% | |
| ATTGCTCCAACTTTACCCCC+CGG | - | tig0021024:20277-20296 | Msa1387960:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0021024:20453-20472 | Msa1387960:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0021024:20460-20479 | Msa1387960:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0021024:20460-20479 | Msa1387960:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0021024:20462-20481 | Msa1387960:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0021024:20480-20499 | Msa1387960:CDS | 50.0% |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0021024:19500-19519 | Msa1387960:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0021024:19859-19878 | Msa1387960:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0021024:19942-19961 | Msa1387960:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0021024:19961-19980 | Msa1387960:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0021024:19973-19992 | Msa1387960:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0021024:19974-19993 | Msa1387960:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0021024:20032-20051 | Msa1387960:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0021024:20033-20052 | Msa1387960:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0021024:20034-20053 | Msa1387960:CDS | 55.0% |
| !! | AGGCCTTATAAGGTACCGGG+GGG | + | tig0021024:20259-20278 | Msa1387960:CDS | 55.0% |
| !! | AAGGTACCGGGGGGTAAAGT+TGG | + | tig0021024:20268-20287 | Msa1387960:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0021024:20465-20484 | Msa1387960:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0021024:20469-20488 | Msa1387960:intergenic | 55.0% | |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0021024:19500-19519 | Msa1387960:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0021024:19859-19878 | Msa1387960:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0021024:19942-19961 | Msa1387960:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0021024:19961-19980 | Msa1387960:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0021024:19973-19992 | Msa1387960:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0021024:19974-19993 | Msa1387960:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0021024:20032-20051 | Msa1387960:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0021024:20033-20052 | Msa1387960:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0021024:20034-20053 | Msa1387960:CDS | 55.0% |
| !! | AGGCCTTATAAGGTACCGGG+GGG | + | tig0021024:20259-20278 | Msa1387960:CDS | 55.0% |
| !! | AAGGTACCGGGGGGTAAAGT+TGG | + | tig0021024:20268-20287 | Msa1387960:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0021024:20465-20484 | Msa1387960:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0021024:20469-20488 | Msa1387960:intergenic | 55.0% | |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0021024:19860-19879 | Msa1387960:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0021024:20080-20099 | Msa1387960:intergenic | 60.0% |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0021024:19860-19879 | Msa1387960:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0021024:20080-20099 | Msa1387960:intergenic | 60.0% |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0021024:19882-19901 | Msa1387960:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0021024:19890-19909 | Msa1387960:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0021024:19891-19910 | Msa1387960:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0021024:19895-19914 | Msa1387960:intergenic | 70.0% | |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0021024:19882-19901 | Msa1387960:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0021024:19890-19909 | Msa1387960:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0021024:19891-19910 | Msa1387960:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0021024:19895-19914 | Msa1387960:intergenic | 70.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0021024:19868-19887 | Msa1387960:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0021024:19876-19895 | Msa1387960:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0021024:19877-19896 | Msa1387960:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0021024:19887-19906 | Msa1387960:intergenic | 75.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0021024:19868-19887 | Msa1387960:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0021024:19876-19895 | Msa1387960:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0021024:19877-19896 | Msa1387960:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0021024:19887-19906 | Msa1387960:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021024 | gene | 19119 | 20510 | 19119 | ID=Msa1387960;Name=Msa1387960 |
| tig0021024 | mRNA | 19119 | 20510 | 19119 | ID=Msa1387960-mRNA-1;Parent=Msa1387960;Name=Msa1387960-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|463 |
| tig0021024 | exon | 19119 | 20510 | 19119 | ID=Msa1387960-mRNA-1:exon:10927;Parent=Msa1387960-mRNA-1 |
| tig0021024 | CDS | 19119 | 20510 | 19119 | ID=Msa1387960-mRNA-1:cds;Parent=Msa1387960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
