Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433660 | XP_024630487.1 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433660 | sp|Q9C6S5|PHSB_ARATH | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433660 | A0A396IMD5 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1351190 | Msa1433660 | 0.907893 | 3.096258e-81 | -8.615850e-47 |
| Msa1387960 | Msa1433660 | 0.901131 | 3.654255e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433660 | MtrunA17_Chr3g0094551 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Msa1433660 | MtrunA17_Chr5g0409251 | 79.526 | 464 | 92 | 2 | 1 | 463 | 14 | 475 | 0.0 | 755 |
| Msa1433660 | MtrunA17_Chr1g0211371 | 71.397 | 451 | 129 | 0 | 2 | 452 | 9 | 459 | 0.0 | 666 |
| Msa1433660 | MtrunA17_Chr5g0393681 | 54.897 | 439 | 196 | 2 | 18 | 455 | 9 | 446 | 2.36e-168 | 483 |
| Msa1433660 | MtrunA17_Chr8g0378551 | 48.966 | 435 | 219 | 2 | 13 | 444 | 34 | 468 | 8.19e-150 | 435 |
| Msa1433660 | MtrunA17_Chr5g0426641 | 47.846 | 441 | 227 | 2 | 14 | 451 | 20 | 460 | 6.60e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433660 | AT1G31830.1 | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Msa1433660 | AT1G31830.2 | 70.779 | 462 | 132 | 2 | 5 | 463 | 18 | 479 | 0.0 | 687 |
| Msa1433660 | AT5G05630.1 | 70.460 | 457 | 130 | 2 | 1 | 452 | 32 | 488 | 0.0 | 665 |
| Msa1433660 | AT1G31820.1 | 63.755 | 458 | 164 | 1 | 8 | 463 | 25 | 482 | 0.0 | 603 |
| Msa1433660 | AT3G19553.1 | 57.944 | 428 | 178 | 2 | 18 | 443 | 21 | 448 | 5.39e-177 | 504 |
| Msa1433660 | AT3G13620.1 | 45.770 | 461 | 244 | 3 | 5 | 459 | 12 | 472 | 5.67e-143 | 418 |
Find 104 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTCTTGTACTCTTT+TGG | 0.164145 | tig0027401:+58137 | Msa1433660:CDS |
| GGTCCTCTCTTAACCCTTCT+TGG | 0.208029 | tig0027401:+57216 | Msa1433660:CDS |
| ATCAGCTTTAGGACCTTATT+GGG | 0.221976 | tig0027401:+57341 | Msa1433660:CDS |
| TCAGGGATACTCCATATAAA+TGG | 0.230173 | tig0027401:-57252 | Msa1433660:intergenic |
| GTTTGGGTTTCATCAGCTTT+AGG | 0.243950 | tig0027401:+57330 | Msa1433660:CDS |
| TGCAGCTGCGGTGTCGAATA+TGG | 0.255598 | tig0027401:+57932 | Msa1433660:CDS |
| CATCAGCTTTAGGACCTTAT+TGG | 0.283142 | tig0027401:+57340 | Msa1433660:CDS |
| GCCGACTCATTTCAGCTTCT+AGG | 0.293315 | tig0027401:+57978 | Msa1433660:CDS |
| AAAACAGTGGTTATGTTGTT+TGG | 0.310011 | tig0027401:+57313 | Msa1433660:CDS |
| CGCTACGGTACGCCTATTAT+AGG | 0.318281 | tig0027401:+58047 | Msa1433660:CDS |
| TCCAACAAGGTTGGATGAAA+TGG | 0.322758 | tig0027401:+57367 | Msa1433660:CDS |
| TCCATTTCATCCAACCTTGT+TGG | 0.334475 | tig0027401:-57368 | Msa1433660:intergenic |
| TGGATTTAAAAGATATTGAT+TGG | 0.335722 | tig0027401:+57649 | Msa1433660:CDS |
| AAATGCATCAAGGCCTTATA+AGG | 0.337429 | tig0027401:+58208 | Msa1433660:CDS |
| TCAGCAGTGATCAAGGCTTC+AGG | 0.339235 | tig0027401:-57270 | Msa1433660:intergenic |
| TCCACTTCAACCCATCTTGA+TGG | 0.351473 | tig0027401:-57630 | Msa1433660:intergenic |
| TCAGATATTGCTATGATCAT+TGG | 0.351597 | tig0027401:+57879 | Msa1433660:CDS |
| AAGTGGCTGGCCTAGAGTTT+TGG | 0.352088 | tig0027401:+57467 | Msa1433660:CDS |
| TTATAAGGCCTTGATGCATT+TGG | 0.365218 | tig0027401:-58206 | Msa1433660:intergenic |
| TTGGTTTGTTGGTGTGGTAC+TGG | 0.372779 | tig0027401:-57100 | Msa1433660:intergenic |
| AAAGCATAAAACAAACCTTT+AGG | 0.375897 | tig0027401:-57765 | Msa1433660:intergenic |
| ACCTACCTGATCTGGACAAT+GGG | 0.376715 | tig0027401:+58420 | Msa1433660:CDS |
| CATCTTGATGGTTCCAACTT+AGG | 0.382965 | tig0027401:-57618 | Msa1433660:intergenic |
| ATTTATTTCAATTCCTAAGT+TGG | 0.384356 | tig0027401:+57605 | Msa1433660:CDS |
| TATAGAGGTTTAACTATTGT+TGG | 0.385829 | tig0027401:+57528 | Msa1433660:CDS |
| TTCCAGTGGACCGCGCGGCT+TGG | 0.391262 | tig0027401:+57841 | Msa1433660:CDS |
| GCTACGGTACGCCTATTATA+GGG | 0.396902 | tig0027401:+58048 | Msa1433660:CDS |
| GAAGTGTCTGGAGGACCATT+TGG | 0.412620 | tig0027401:+57168 | Msa1433660:CDS |
| AAACAGTGGTTATGTTGTTT+GGG | 0.414591 | tig0027401:+57314 | Msa1433660:CDS |
| CTCTCCCCATTGTCCAGATC+AGG | 0.418939 | tig0027401:-58425 | Msa1433660:intergenic |
| ATCCCACCTACAATATTGAT+TGG | 0.423497 | tig0027401:+58266 | Msa1433660:CDS |
| AGCCTTGATCACTGCTGAAA+TGG | 0.423748 | tig0027401:+57275 | Msa1433660:CDS |
| AGATAATCAAGAAACAAAAC+TGG | 0.424322 | tig0027401:-57420 | Msa1433660:intergenic |
| ATCATCTTCTATGAAGTGTC+TGG | 0.425953 | tig0027401:+57156 | Msa1433660:CDS |
| CCTTGTTGGAAACCCCAATA+AGG | 0.431314 | tig0027401:-57354 | Msa1433660:intergenic |
| ACAAAACCAATCAATATTGT+AGG | 0.447741 | tig0027401:-58272 | Msa1433660:intergenic |
| TCCCATTTCAGCAGTGATCA+AGG | 0.449929 | tig0027401:-57277 | Msa1433660:intergenic |
| GGCCAGCCACTTTCTAAAGC+TGG | 0.452471 | tig0027401:-57456 | Msa1433660:intergenic |
| GATTCTATAAGTACTCTTGT+TGG | 0.458007 | tig0027401:+57714 | Msa1433660:CDS |
| CAGGGATACTCCATATAAAT+GGG | 0.460294 | tig0027401:-57251 | Msa1433660:intergenic |
| CTATGATCATTGGTGGAGCT+TGG | 0.461415 | tig0027401:+57889 | Msa1433660:CDS |
| CTCTCCACAAATTTGAGACA+AGG | 0.466334 | tig0027401:-58365 | Msa1433660:intergenic |
| CCGACTCATTTCAGCTTCTA+GGG | 0.471267 | tig0027401:+57979 | Msa1433660:CDS |
| ATAAATCCCATAACAACAAA+AGG | 0.475766 | tig0027401:-57588 | Msa1433660:intergenic |
| TAGTCCTGACCTACCTGATC+TGG | 0.476702 | tig0027401:+58412 | Msa1433660:CDS |
| CTTGATTTGGTTTGTTGGTG+TGG | 0.478422 | tig0027401:-57106 | Msa1433660:intergenic |
| GCCTTGATCACTGCTGAAAT+GGG | 0.479371 | tig0027401:+57276 | Msa1433660:CDS |
| ACTATTCCAGCTTTAGAAAG+TGG | 0.483127 | tig0027401:+57450 | Msa1433660:CDS |
| GCAGCCTTGTCTCAAATTTG+TGG | 0.484308 | tig0027401:+58361 | Msa1433660:CDS |
| TGCCTGAGTTCTTTACCAAA+AGG | 0.486374 | tig0027401:+58021 | Msa1433660:CDS |
| CCTAATGTTGCCAAAACTCT+AGG | 0.487463 | tig0027401:-57477 | Msa1433660:intergenic |
| TTGTCCAGATCAGGTAGGTC+AGG | 0.487753 | tig0027401:-58416 | Msa1433660:intergenic |
| TTCCAGCTTTAGAAAGTGGC+TGG | 0.498721 | tig0027401:+57454 | Msa1433660:CDS |
| GACCGCGCGGCTTGGAGTGA+CGG | 0.505316 | tig0027401:+57849 | Msa1433660:CDS |
| CCTTATTGGGGTTTCCAACA+AGG | 0.506446 | tig0027401:+57354 | Msa1433660:CDS |
| TCAAGGCCTTATAAGGTACC+AGG | 0.511073 | tig0027401:+58215 | Msa1433660:CDS |
| CCAAGGAAAACACTTCCTAA+AGG | 0.513941 | tig0027401:+57750 | Msa1433660:CDS |
| AGTGTCATTGCTATGGTGAT+TGG | 0.514324 | tig0027401:+58329 | Msa1433660:CDS |
| GATATTGCTATGATCATTGG+TGG | 0.514890 | tig0027401:+57882 | Msa1433660:CDS |
| CTCATTTCAGCTTCTAGGGA+TGG | 0.515121 | tig0027401:+57983 | Msa1433660:CDS |
| CAGCAGTGATCAAGGCTTCA+GGG | 0.515674 | tig0027401:-57269 | Msa1433660:intergenic |
| ATTGGGGTTTCCAACAAGGT+TGG | 0.521088 | tig0027401:+57358 | Msa1433660:CDS |
| GCAGCTGCGGTGTCGAATAT+GGG | 0.523410 | tig0027401:+57933 | Msa1433660:CDS |
| TTGGTGGAGCTTGGTTGAGA+TGG | 0.527133 | tig0027401:+57898 | Msa1433660:CDS |
| TGTTATAAGTGTCATTGCTA+TGG | 0.529506 | tig0027401:+58322 | Msa1433660:CDS |
| TGGCACCGGCGCGGTTCCAG+TGG | 0.532048 | tig0027401:+57827 | Msa1433660:CDS |
| AAACCAATCAATATTGTAGG+TGG | 0.533397 | tig0027401:-58269 | Msa1433660:intergenic |
| GCTTCTAGGGATGGCTGAGA+GGG | 0.533973 | tig0027401:+57992 | Msa1433660:CDS |
| ACCGCGCGGCTTGGAGTGAC+GGG | 0.534962 | tig0027401:+57850 | Msa1433660:CDS |
| GTGGAGCTTGGTTGAGATGG+TGG | 0.535569 | tig0027401:+57901 | Msa1433660:CDS |
| GGAAAACTATGAATCCAAGA+AGG | 0.537053 | tig0027401:-57230 | Msa1433660:intergenic |
| ACTGCATCCTCTGAACCAAA+TGG | 0.544541 | tig0027401:-57183 | Msa1433660:intergenic |
| TTGGTGAAGTTGAAAATCCA+AGG | 0.544668 | tig0027401:+57733 | Msa1433660:CDS |
| TGGAGGACCATTTGGTTCAG+AGG | 0.551347 | tig0027401:+57176 | Msa1433660:CDS |
| TAAGTTGGAACCATCAAGAT+GGG | 0.561659 | tig0027401:+57620 | Msa1433660:CDS |
| GAGGATGCAGTAAAAGCAGC+TGG | 0.564248 | tig0027401:+57195 | Msa1433660:CDS |
| ACCATCAAGATGGGTTGAAG+TGG | 0.565642 | tig0027401:+57629 | Msa1433660:CDS |
| GGTTGGATGAAATGGATTAG+TGG | 0.567663 | tig0027401:+57375 | Msa1433660:CDS |
| AATTTGTGGAGAGAAAGAAA+TGG | 0.574720 | tig0027401:+58375 | Msa1433660:CDS |
| TGGGGAGAGCACACAAACAT+TGG | 0.574767 | tig0027401:+58439 | Msa1433660:CDS |
| CTAAGTTGGAACCATCAAGA+TGG | 0.579540 | tig0027401:+57619 | Msa1433660:CDS |
| TTTGTTGGTGTGGTACTGGT+AGG | 0.580564 | tig0027401:-57096 | Msa1433660:intergenic |
| TTTACCAAAAGGTCGCGCTA+CGG | 0.586063 | tig0027401:+58032 | Msa1433660:CDS |
| CCCTAGAAGCTGAAATGAGT+CGG | 0.588600 | tig0027401:-57979 | Msa1433660:intergenic |
| GTGGCTTAATGCTGCAGCTG+CGG | 0.592462 | tig0027401:+57920 | Msa1433660:CDS |
| GACCTACCTGATCTGGACAA+TGG | 0.594367 | tig0027401:+58419 | Msa1433660:CDS |
| AGCTTCTAGGGATGGCTGAG+AGG | 0.595536 | tig0027401:+57991 | Msa1433660:CDS |
| TAGAAGATGATGAAGATGAG+AGG | 0.601071 | tig0027401:-57144 | Msa1433660:intergenic |
| TCAGCTTTAGGACCTTATTG+GGG | 0.602003 | tig0027401:+57342 | Msa1433660:CDS |
| AACCAATCAATATTGTAGGT+GGG | 0.606006 | tig0027401:-58268 | Msa1433660:intergenic |
| GAAAACTATGAATCCAAGAA+GGG | 0.606263 | tig0027401:-57229 | Msa1433660:intergenic |
| ATCTTCTATGAAGTGTCTGG+AGG | 0.631099 | tig0027401:+57159 | Msa1433660:CDS |
| CGCGGTTCCAGTGGACCGCG+CGG | 0.639341 | tig0027401:+57836 | Msa1433660:CDS |
| CAAGGCCTTATAAGGTACCA+GGG | 0.652685 | tig0027401:+58216 | Msa1433660:CDS |
| AATCCAAGAAGGGTTAAGAG+AGG | 0.667612 | tig0027401:-57219 | Msa1433660:intergenic |
| CTTCTAGGGATGGCTGAGAG+GGG | 0.668163 | tig0027401:+57993 | Msa1433660:CDS |
| AAGGCCTTATAAGGTACCAG+GGG | 0.690559 | tig0027401:+58217 | Msa1433660:CDS |
| TGAAAGTAAAATCACACCGG+AGG | 0.691386 | tig0027401:-58084 | Msa1433660:intergenic |
| CCATGAAAGTAAAATCACAC+CGG | 0.697705 | tig0027401:-58087 | Msa1433660:intergenic |
| CCCCATTGTCCAGATCAGGT+AGG | 0.702852 | tig0027401:-58421 | Msa1433660:intergenic |
| ACCCGTCACTCCAAGCCGCG+CGG | 0.707480 | tig0027401:-57851 | Msa1433660:intergenic |
| CCTACCTGATCTGGACAATG+GGG | 0.745924 | tig0027401:+58421 | Msa1433660:CDS |
| AGGCCTTATAAGGTACCAGG+GGG | 0.752209 | tig0027401:+58218 | Msa1433660:CDS |
| ACAATGTTCCCTGAAAACAG+TGG | 0.765904 | tig0027401:+57300 | Msa1433660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0027401:57122-57141 | Msa0046470:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0027401:57513-57532 | Msa1433660:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0027401:57605-57624 | Msa1433660:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0027401:57649-57668 | Msa1433660:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0027401:57676-57695 | Msa1433660:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0027401:57691-57710 | Msa1433660:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0027401:57692-57711 | Msa1433660:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0027401:57773-57792 | Msa1433660:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0027401:58061-58080 | Msa1433660:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0027401:58277-58296 | Msa1433660:CDS | 20.0% |
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0027401:57122-57141 | Msa1433660:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0027401:57513-57532 | Msa1433660:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0027401:57605-57624 | Msa1433660:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0027401:57649-57668 | Msa1433660:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0027401:57676-57695 | Msa1433660:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0027401:57691-57710 | Msa1433660:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0027401:57692-57711 | Msa1433660:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0027401:57773-57792 | Msa1433660:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0027401:58061-58080 | Msa1433660:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0027401:58277-58296 | Msa1433660:CDS | 20.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0027401:57114-57133 | Msa0046470:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0027401:57241-57260 | Msa1433660:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0027401:57423-57442 | Msa1433660:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0027401:57528-57547 | Msa1433660:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0027401:57582-57601 | Msa1433660:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0027401:57591-57610 | Msa1433660:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0027401:57768-57787 | Msa1433660:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0027401:58062-58081 | Msa1433660:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0027401:58137-58156 | Msa1433660:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0027401:58198-58217 | Msa1433660:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0027401:58275-58294 | Msa1433660:intergenic | 25.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0027401:57114-57133 | Msa1433660:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0027401:57241-57260 | Msa1433660:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0027401:57423-57442 | Msa1433660:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0027401:57528-57547 | Msa1433660:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0027401:57582-57601 | Msa1433660:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0027401:57591-57610 | Msa1433660:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0027401:57768-57787 | Msa1433660:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0027401:58062-58081 | Msa1433660:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0027401:58137-58156 | Msa1433660:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0027401:58198-58217 | Msa1433660:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0027401:58275-58294 | Msa1433660:intergenic | 25.0% |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0027401:57232-57251 | Msa1433660:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0027401:57313-57332 | Msa1433660:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0027401:57314-57333 | Msa1433660:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0027401:57550-57569 | Msa1433660:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0027401:57581-57600 | Msa1433660:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0027401:57714-57733 | Msa1433660:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0027401:57784-57803 | Msa1433660:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0027401:57807-57826 | Msa1433660:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0027401:57879-57898 | Msa1433660:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0027401:58109-58128 | Msa1433660:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0027401:58271-58290 | Msa1433660:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0027401:58272-58291 | Msa1433660:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0027401:58322-58341 | Msa1433660:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0027401:58375-58394 | Msa1433660:CDS | 30.0% | |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0027401:57232-57251 | Msa1433660:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0027401:57313-57332 | Msa1433660:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0027401:57314-57333 | Msa1433660:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0027401:57550-57569 | Msa1433660:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0027401:57581-57600 | Msa1433660:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0027401:57714-57733 | Msa1433660:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0027401:57784-57803 | Msa1433660:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0027401:57807-57826 | Msa1433660:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0027401:57879-57898 | Msa1433660:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0027401:58109-58128 | Msa1433660:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0027401:58271-58290 | Msa1433660:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0027401:58272-58291 | Msa1433660:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0027401:58322-58341 | Msa1433660:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0027401:58375-58394 | Msa1433660:CDS | 30.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0027401:57147-57166 | Msa0046470:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0027401:57156-57175 | Msa1433660:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0027401:57233-57252 | Msa1433660:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0027401:57254-57273 | Msa1433660:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0027401:57255-57274 | Msa1433660:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0027401:57311-57330 | Msa1433660:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0027401:57312-57331 | Msa1433660:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0027401:57341-57360 | Msa1433660:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0027401:57450-57469 | Msa1433660:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0027401:57549-57568 | Msa1433660:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0027401:57620-57639 | Msa1433660:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0027401:57733-57752 | Msa1433660:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0027401:57783-57802 | Msa1433660:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0027401:57882-57901 | Msa1433660:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0027401:58090-58109 | Msa1433660:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0027401:58209-58228 | Msa1433660:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0027401:58208-58227 | Msa1433660:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0027401:58266-58285 | Msa1433660:CDS | 35.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0027401:57147-57166 | Msa1433660:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0027401:57156-57175 | Msa1433660:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0027401:57233-57252 | Msa1433660:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0027401:57254-57273 | Msa1433660:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0027401:57255-57274 | Msa1433660:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0027401:57311-57330 | Msa1433660:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0027401:57312-57331 | Msa1433660:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0027401:57341-57360 | Msa1433660:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0027401:57450-57469 | Msa1433660:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0027401:57549-57568 | Msa1433660:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0027401:57620-57639 | Msa1433660:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0027401:57733-57752 | Msa1433660:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0027401:57783-57802 | Msa1433660:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0027401:57882-57901 | Msa1433660:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0027401:58090-58109 | Msa1433660:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0027401:58209-58228 | Msa1433660:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0027401:58208-58227 | Msa1433660:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0027401:58266-58285 | Msa1433660:CDS | 35.0% | |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0027401:57109-57128 | Msa0046470:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0027401:57159-57178 | Msa1433660:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0027401:57222-57241 | Msa1433660:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0027401:57300-57319 | Msa1433660:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0027401:57330-57349 | Msa1433660:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0027401:57340-57359 | Msa1433660:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0027401:57342-57361 | Msa1433660:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0027401:57367-57386 | Msa1433660:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0027401:57371-57390 | Msa1433660:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0027401:57375-57394 | Msa1433660:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0027401:57480-57499 | Msa1433660:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0027401:57477-57496 | Msa1433660:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0027401:57621-57640 | Msa1433660:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0027401:57619-57638 | Msa1433660:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0027401:57753-57772 | Msa1433660:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0027401:57750-57769 | Msa1433660:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0027401:57813-57832 | Msa1433660:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0027401:58021-58040 | Msa1433660:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0027401:58026-58045 | Msa1433660:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0027401:58087-58106 | Msa1433660:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0027401:58087-58106 | Msa1433660:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0027401:58329-58348 | Msa1433660:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0027401:58368-58387 | Msa1433660:intergenic | 40.0% |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0027401:57109-57128 | Msa1433660:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0027401:57159-57178 | Msa1433660:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0027401:57222-57241 | Msa1433660:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0027401:57300-57319 | Msa1433660:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0027401:57330-57349 | Msa1433660:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0027401:57340-57359 | Msa1433660:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0027401:57342-57361 | Msa1433660:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0027401:57367-57386 | Msa1433660:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0027401:57371-57390 | Msa1433660:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0027401:57375-57394 | Msa1433660:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0027401:57480-57499 | Msa1433660:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0027401:57477-57496 | Msa1433660:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0027401:57621-57640 | Msa1433660:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0027401:57619-57638 | Msa1433660:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0027401:57753-57772 | Msa1433660:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0027401:57750-57769 | Msa1433660:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0027401:57813-57832 | Msa1433660:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0027401:58021-58040 | Msa1433660:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0027401:58026-58045 | Msa1433660:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0027401:58087-58106 | Msa1433660:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0027401:58087-58106 | Msa1433660:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0027401:58329-58348 | Msa1433660:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0027401:58368-58387 | Msa1433660:intergenic | 40.0% |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0027401:57099-57118 | Msa0046470:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0027401:57103-57122 | Msa0046470:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0027401:57186-57205 | Msa1433660:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0027401:57275-57294 | Msa1433660:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0027401:57276-57295 | Msa1433660:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0027401:57280-57299 | Msa1433660:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0027401:57357-57376 | Msa1433660:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0027401:57354-57373 | Msa1433660:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0027401:57358-57377 | Msa1433660:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0027401:57454-57473 | Msa1433660:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0027401:57629-57648 | Msa1433660:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0027401:57633-57652 | Msa1433660:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0027401:57889-57908 | Msa1433660:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0027401:57982-58001 | Msa1433660:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0027401:57979-57998 | Msa1433660:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0027401:57983-58002 | Msa1433660:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0027401:58032-58051 | Msa1433660:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0027401:58048-58067 | Msa1433660:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+AGG | + | tig0027401:58215-58234 | Msa1433660:CDS | 45.0% |
| ! | CAAGGCCTTATAAGGTACCA+GGG | + | tig0027401:58216-58235 | Msa1433660:CDS | 45.0% |
| ! | AAGGCCTTATAAGGTACCAG+GGG | + | tig0027401:58217-58236 | Msa1433660:CDS | 45.0% |
| TTACCCCCTGGTACCTTATA+AGG | - | tig0027401:58224-58243 | Msa1433660:intergenic | 45.0% | |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0027401:58361-58380 | Msa1433660:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0027401:58420-58439 | Msa1433660:CDS | 45.0% | |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0027401:57099-57118 | Msa1433660:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0027401:57103-57122 | Msa1433660:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0027401:57186-57205 | Msa1433660:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0027401:57275-57294 | Msa1433660:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0027401:57276-57295 | Msa1433660:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0027401:57280-57299 | Msa1433660:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0027401:57357-57376 | Msa1433660:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0027401:57354-57373 | Msa1433660:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0027401:57358-57377 | Msa1433660:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0027401:57454-57473 | Msa1433660:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0027401:57629-57648 | Msa1433660:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0027401:57633-57652 | Msa1433660:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0027401:57889-57908 | Msa1433660:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0027401:57982-58001 | Msa1433660:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0027401:57979-57998 | Msa1433660:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0027401:57983-58002 | Msa1433660:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0027401:58032-58051 | Msa1433660:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0027401:58048-58067 | Msa1433660:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+AGG | + | tig0027401:58215-58234 | Msa1433660:CDS | 45.0% |
| ! | CAAGGCCTTATAAGGTACCA+GGG | + | tig0027401:58216-58235 | Msa1433660:CDS | 45.0% |
| ! | AAGGCCTTATAAGGTACCAG+GGG | + | tig0027401:58217-58236 | Msa1433660:CDS | 45.0% |
| TTACCCCCTGGTACCTTATA+AGG | - | tig0027401:58224-58243 | Msa1433660:intergenic | 45.0% | |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0027401:58361-58380 | Msa1433660:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0027401:58420-58439 | Msa1433660:CDS | 45.0% | |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0027401:57168-57187 | Msa1433660:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0027401:57176-57195 | Msa1433660:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0027401:57195-57214 | Msa1433660:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0027401:57216-57235 | Msa1433660:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0027401:57272-57291 | Msa1433660:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0027401:57273-57292 | Msa1433660:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0027401:57467-57486 | Msa1433660:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0027401:57898-57917 | Msa1433660:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0027401:57978-57997 | Msa1433660:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0027401:58047-58066 | Msa1433660:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0027401:58068-58087 | Msa1433660:CDS | 50.0% |
| ! | AGGCCTTATAAGGTACCAGG+GGG | + | tig0027401:58218-58237 | Msa1433660:CDS | 50.0% |
| ! | AAGGTACCAGGGGGTAAAGT+TGG | + | tig0027401:58227-58246 | Msa1433660:CDS | 50.0% |
| ATTGCTCCAACTTTACCCCC+TGG | - | tig0027401:58236-58255 | Msa1433660:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0027401:58412-58431 | Msa1433660:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0027401:58419-58438 | Msa1433660:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0027401:58419-58438 | Msa1433660:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0027401:58421-58440 | Msa1433660:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0027401:58439-58458 | Msa1433660:CDS | 50.0% |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0027401:57168-57187 | Msa1433660:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0027401:57176-57195 | Msa1433660:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0027401:57195-57214 | Msa1433660:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0027401:57216-57235 | Msa1433660:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0027401:57272-57291 | Msa1433660:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0027401:57273-57292 | Msa1433660:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0027401:57467-57486 | Msa1433660:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0027401:57898-57917 | Msa1433660:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0027401:57978-57997 | Msa1433660:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0027401:58047-58066 | Msa1433660:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0027401:58068-58087 | Msa1433660:CDS | 50.0% |
| ! | AGGCCTTATAAGGTACCAGG+GGG | + | tig0027401:58218-58237 | Msa1433660:CDS | 50.0% |
| ! | AAGGTACCAGGGGGTAAAGT+TGG | + | tig0027401:58227-58246 | Msa1433660:CDS | 50.0% |
| ATTGCTCCAACTTTACCCCC+TGG | - | tig0027401:58236-58255 | Msa1433660:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0027401:58412-58431 | Msa1433660:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0027401:58419-58438 | Msa1433660:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0027401:58419-58438 | Msa1433660:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0027401:58421-58440 | Msa1433660:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0027401:58439-58458 | Msa1433660:CDS | 50.0% |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0027401:57459-57478 | Msa1433660:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0027401:57818-57837 | Msa1433660:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0027401:57901-57920 | Msa1433660:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0027401:57920-57939 | Msa1433660:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0027401:57932-57951 | Msa1433660:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0027401:57933-57952 | Msa1433660:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0027401:57991-58010 | Msa1433660:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0027401:57992-58011 | Msa1433660:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0027401:57993-58012 | Msa1433660:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0027401:58424-58443 | Msa1433660:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0027401:58428-58447 | Msa1433660:intergenic | 55.0% | |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0027401:57459-57478 | Msa1433660:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0027401:57818-57837 | Msa1433660:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0027401:57901-57920 | Msa1433660:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0027401:57920-57939 | Msa1433660:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0027401:57932-57951 | Msa1433660:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0027401:57933-57952 | Msa1433660:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0027401:57991-58010 | Msa1433660:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0027401:57992-58011 | Msa1433660:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0027401:57993-58012 | Msa1433660:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0027401:58424-58443 | Msa1433660:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0027401:58428-58447 | Msa1433660:intergenic | 55.0% | |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0027401:57819-57838 | Msa1433660:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0027401:58039-58058 | Msa1433660:intergenic | 60.0% |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0027401:57819-57838 | Msa1433660:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0027401:58039-58058 | Msa1433660:intergenic | 60.0% |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0027401:57841-57860 | Msa1433660:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0027401:57849-57868 | Msa1433660:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0027401:57850-57869 | Msa1433660:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0027401:57854-57873 | Msa1433660:intergenic | 70.0% | |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0027401:57841-57860 | Msa1433660:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0027401:57849-57868 | Msa1433660:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0027401:57850-57869 | Msa1433660:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0027401:57854-57873 | Msa1433660:intergenic | 70.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0027401:57827-57846 | Msa1433660:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0027401:57835-57854 | Msa1433660:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0027401:57836-57855 | Msa1433660:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0027401:57846-57865 | Msa1433660:intergenic | 75.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0027401:57827-57846 | Msa1433660:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0027401:57835-57854 | Msa1433660:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0027401:57836-57855 | Msa1433660:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0027401:57846-57865 | Msa1433660:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027401 | gene | 57078 | 58469 | 57078 | ID=Msa1433660;Name=Msa1433660 |
| tig0027401 | mRNA | 57078 | 58469 | 57078 | ID=Msa1433660-mRNA-1;Parent=Msa1433660;Name=Msa1433660-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|463 |
| tig0027401 | exon | 57078 | 58469 | 57078 | ID=Msa1433660-mRNA-1:exon:8738;Parent=Msa1433660-mRNA-1 |
| tig0027401 | CDS | 57078 | 58469 | 57078 | ID=Msa1433660-mRNA-1:cds;Parent=Msa1433660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
