Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351190 | XP_024630487.1 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351190 | sp|Q9C6S5|PHSB_ARATH | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351190 | A0A396IMD5 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1351190 | Msa1387960 | 0.994894 | 3.844464e-211 | -8.615850e-47 |
| Msa1351190 | Msa1433660 | 0.907893 | 3.096258e-81 | -8.615850e-47 |
| Msa0735550 | Msa1351190 | 0.800500 | 1.400072e-48 | -8.615850e-47 |
| Msa0187830 | Msa1351190 | 0.801587 | 8.394018e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351190 | MtrunA17_Chr3g0094551 | 98.704 | 463 | 6 | 0 | 1 | 463 | 1 | 463 | 0.0 | 904 |
| Msa1351190 | MtrunA17_Chr5g0409251 | 79.526 | 464 | 92 | 2 | 1 | 463 | 14 | 475 | 0.0 | 755 |
| Msa1351190 | MtrunA17_Chr1g0211371 | 71.397 | 451 | 129 | 0 | 2 | 452 | 9 | 459 | 0.0 | 666 |
| Msa1351190 | MtrunA17_Chr5g0393681 | 54.897 | 439 | 196 | 2 | 18 | 455 | 9 | 446 | 2.36e-168 | 483 |
| Msa1351190 | MtrunA17_Chr8g0378551 | 48.966 | 435 | 219 | 2 | 13 | 444 | 34 | 468 | 8.19e-150 | 435 |
| Msa1351190 | MtrunA17_Chr5g0426641 | 47.846 | 441 | 227 | 2 | 14 | 451 | 20 | 460 | 6.60e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1351190 | AT1G31830.1 | 70.779 | 462 | 132 | 2 | 5 | 463 | 34 | 495 | 0.0 | 688 |
| Msa1351190 | AT1G31830.2 | 70.779 | 462 | 132 | 2 | 5 | 463 | 18 | 479 | 0.0 | 687 |
| Msa1351190 | AT5G05630.1 | 70.460 | 457 | 130 | 2 | 1 | 452 | 32 | 488 | 0.0 | 665 |
| Msa1351190 | AT1G31820.1 | 63.755 | 458 | 164 | 1 | 8 | 463 | 25 | 482 | 0.0 | 603 |
| Msa1351190 | AT3G19553.1 | 57.944 | 428 | 178 | 2 | 18 | 443 | 21 | 448 | 5.39e-177 | 504 |
| Msa1351190 | AT3G13620.1 | 45.770 | 461 | 244 | 3 | 5 | 459 | 12 | 472 | 5.67e-143 | 418 |
Find 105 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTCTTGTACTCTTT+TGG | 0.164145 | tig0012157:+14147 | Msa1351190:CDS |
| GGTCCTCTCTTAACCCTTCT+TGG | 0.208029 | tig0012157:+13226 | Msa1351190:CDS |
| ATCAGCTTTAGGACCTTATT+GGG | 0.221976 | tig0012157:+13351 | Msa1351190:CDS |
| TCAGGGATACTCCATATAAA+TGG | 0.230173 | tig0012157:-13262 | None:intergenic |
| GTTTGGGTTTCATCAGCTTT+AGG | 0.243950 | tig0012157:+13340 | Msa1351190:CDS |
| TGCAGCTGCGGTGTCGAATA+TGG | 0.255598 | tig0012157:+13942 | Msa1351190:CDS |
| CATCAGCTTTAGGACCTTAT+TGG | 0.283142 | tig0012157:+13350 | Msa1351190:CDS |
| GCCGACTCATTTCAGCTTCT+AGG | 0.293315 | tig0012157:+13988 | Msa1351190:CDS |
| AAAACAGTGGTTATGTTGTT+TGG | 0.310011 | tig0012157:+13323 | Msa1351190:CDS |
| CGCTACGGTACGCCTATTAT+AGG | 0.318281 | tig0012157:+14057 | Msa1351190:CDS |
| TCCAACAAGGTTGGATGAAA+TGG | 0.322758 | tig0012157:+13377 | Msa1351190:CDS |
| TCCATTTCATCCAACCTTGT+TGG | 0.334475 | tig0012157:-13378 | None:intergenic |
| TGGATTTAAAAGATATTGAT+TGG | 0.335722 | tig0012157:+13659 | Msa1351190:CDS |
| AAATGCATCAAGGCCTTATA+AGG | 0.337429 | tig0012157:+14218 | Msa1351190:CDS |
| TCAGCAGTGATCAAGGCTTC+AGG | 0.339235 | tig0012157:-13280 | None:intergenic |
| TCCACTTCAACCCATCTTGA+TGG | 0.351473 | tig0012157:-13640 | None:intergenic |
| TCAGATATTGCTATGATCAT+TGG | 0.351597 | tig0012157:+13889 | Msa1351190:CDS |
| AAGTGGCTGGCCTAGAGTTT+TGG | 0.352088 | tig0012157:+13477 | Msa1351190:CDS |
| TTATAAGGCCTTGATGCATT+TGG | 0.365218 | tig0012157:-14216 | None:intergenic |
| TTGGTTTGTTGGTGTGGTAC+TGG | 0.372779 | tig0012157:-13110 | None:intergenic |
| AAAGCATAAAACAAACCTTT+AGG | 0.375897 | tig0012157:-13775 | None:intergenic |
| ACCTACCTGATCTGGACAAT+GGG | 0.376715 | tig0012157:+14430 | Msa1351190:CDS |
| CATCTTGATGGTTCCAACTT+AGG | 0.382965 | tig0012157:-13628 | None:intergenic |
| ATTTATTTCAATTCCTAAGT+TGG | 0.384356 | tig0012157:+13615 | Msa1351190:CDS |
| TATAGAGGTTTAACTATTGT+TGG | 0.385829 | tig0012157:+13538 | Msa1351190:CDS |
| TTCCAGTGGACCGCGCGGCT+TGG | 0.391262 | tig0012157:+13851 | Msa1351190:CDS |
| GCTACGGTACGCCTATTATA+GGG | 0.396902 | tig0012157:+14058 | Msa1351190:CDS |
| GAAGTGTCTGGAGGACCATT+TGG | 0.412620 | tig0012157:+13178 | Msa1351190:CDS |
| AAACAGTGGTTATGTTGTTT+GGG | 0.414591 | tig0012157:+13324 | Msa1351190:CDS |
| CTCTCCCCATTGTCCAGATC+AGG | 0.418939 | tig0012157:-14435 | None:intergenic |
| ATCCCACCTACAATATTGAT+TGG | 0.423497 | tig0012157:+14276 | Msa1351190:CDS |
| AGCCTTGATCACTGCTGAAA+TGG | 0.423748 | tig0012157:+13285 | Msa1351190:CDS |
| AGATAATCAAGAAACAAAAC+TGG | 0.424322 | tig0012157:-13430 | None:intergenic |
| ATCATCTTCTATGAAGTGTC+TGG | 0.425953 | tig0012157:+13166 | Msa1351190:CDS |
| CCTTGTTGGAAACCCCAATA+AGG | 0.431314 | tig0012157:-13364 | None:intergenic |
| ACAAAACCAATCAATATTGT+AGG | 0.447741 | tig0012157:-14282 | None:intergenic |
| TCCCATTTCAGCAGTGATCA+AGG | 0.449929 | tig0012157:-13287 | None:intergenic |
| GGCCAGCCACTTTCTAAAGC+TGG | 0.452471 | tig0012157:-13466 | None:intergenic |
| GATTCTATAAGTACTCTTGT+TGG | 0.458007 | tig0012157:+13724 | Msa1351190:CDS |
| CAGGGATACTCCATATAAAT+GGG | 0.460294 | tig0012157:-13261 | None:intergenic |
| CTATGATCATTGGTGGAGCT+TGG | 0.461415 | tig0012157:+13899 | Msa1351190:CDS |
| CTCTCCACAAATTTGAGACA+AGG | 0.466334 | tig0012157:-14375 | None:intergenic |
| CCGACTCATTTCAGCTTCTA+GGG | 0.471267 | tig0012157:+13989 | Msa1351190:CDS |
| ATAAATCCCATAACAACAAA+AGG | 0.475766 | tig0012157:-13598 | None:intergenic |
| TAGTCCTGACCTACCTGATC+TGG | 0.476702 | tig0012157:+14422 | Msa1351190:CDS |
| CTTGATTTGGTTTGTTGGTG+TGG | 0.478422 | tig0012157:-13116 | None:intergenic |
| GCCTTGATCACTGCTGAAAT+GGG | 0.479371 | tig0012157:+13286 | Msa1351190:CDS |
| ACTATTCCAGCTTTAGAAAG+TGG | 0.483127 | tig0012157:+13460 | Msa1351190:CDS |
| GCAGCCTTGTCTCAAATTTG+TGG | 0.484308 | tig0012157:+14371 | Msa1351190:CDS |
| TGCCTGAGTTCTTTACCAAA+AGG | 0.486374 | tig0012157:+14031 | Msa1351190:CDS |
| ATCAAGGCCTTATAAGGTAC+CGG | 0.487574 | tig0012157:+14224 | Msa1351190:CDS |
| TTGTCCAGATCAGGTAGGTC+AGG | 0.487753 | tig0012157:-14426 | None:intergenic |
| CCTAATGTTGCCAAAACTCT+AGG | 0.494283 | tig0012157:-13487 | None:intergenic |
| TTCCAGCTTTAGAAAGTGGC+TGG | 0.498721 | tig0012157:+13464 | Msa1351190:CDS |
| GACCGCGCGGCTTGGAGTGA+CGG | 0.505316 | tig0012157:+13859 | Msa1351190:CDS |
| CCTTATTGGGGTTTCCAACA+AGG | 0.506446 | tig0012157:+13364 | Msa1351190:CDS |
| CCAAGGAAAACACTTCCTAA+AGG | 0.513941 | tig0012157:+13760 | Msa1351190:CDS |
| AGTGTCATTGCTATGGTGAT+TGG | 0.514324 | tig0012157:+14339 | Msa1351190:CDS |
| GATATTGCTATGATCATTGG+TGG | 0.514890 | tig0012157:+13892 | Msa1351190:CDS |
| CTCATTTCAGCTTCTAGGGA+TGG | 0.515121 | tig0012157:+13993 | Msa1351190:CDS |
| CAGCAGTGATCAAGGCTTCA+GGG | 0.515674 | tig0012157:-13279 | None:intergenic |
| ATTGGGGTTTCCAACAAGGT+TGG | 0.521088 | tig0012157:+13368 | Msa1351190:CDS |
| GCAGCTGCGGTGTCGAATAT+GGG | 0.523410 | tig0012157:+13943 | Msa1351190:CDS |
| TTGGTGGAGCTTGGTTGAGA+TGG | 0.527133 | tig0012157:+13908 | Msa1351190:CDS |
| TGTTATAAGTGTCATTGCTA+TGG | 0.529506 | tig0012157:+14332 | Msa1351190:CDS |
| TGGCACCGGCGCGGTTCCAG+TGG | 0.532048 | tig0012157:+13837 | Msa1351190:CDS |
| AAACCAATCAATATTGTAGG+TGG | 0.533397 | tig0012157:-14279 | None:intergenic |
| GCTTCTAGGGATGGCTGAGA+GGG | 0.533973 | tig0012157:+14002 | Msa1351190:CDS |
| ACCGCGCGGCTTGGAGTGAC+GGG | 0.534962 | tig0012157:+13860 | Msa1351190:CDS |
| GTGGAGCTTGGTTGAGATGG+TGG | 0.535569 | tig0012157:+13911 | Msa1351190:CDS |
| GGAAAACTATGAATCCAAGA+AGG | 0.537053 | tig0012157:-13240 | None:intergenic |
| ACTGCATCCTCTGAACCAAA+TGG | 0.544541 | tig0012157:-13193 | None:intergenic |
| TTGGTGAAGTTGAAAATCCA+AGG | 0.544668 | tig0012157:+13743 | Msa1351190:CDS |
| TGGAGGACCATTTGGTTCAG+AGG | 0.551347 | tig0012157:+13186 | Msa1351190:CDS |
| TAAGTTGGAACCATCAAGAT+GGG | 0.561659 | tig0012157:+13630 | Msa1351190:CDS |
| GAGGATGCAGTAAAAGCAGC+TGG | 0.564248 | tig0012157:+13205 | Msa1351190:CDS |
| ACCATCAAGATGGGTTGAAG+TGG | 0.565642 | tig0012157:+13639 | Msa1351190:CDS |
| GGTTGGATGAAATGGATTAG+TGG | 0.567663 | tig0012157:+13385 | Msa1351190:CDS |
| AATTTGTGGAGAGAAAGAAA+TGG | 0.574720 | tig0012157:+14385 | Msa1351190:CDS |
| TGGGGAGAGCACACAAACAT+TGG | 0.574767 | tig0012157:+14449 | Msa1351190:CDS |
| CTAAGTTGGAACCATCAAGA+TGG | 0.579540 | tig0012157:+13629 | Msa1351190:CDS |
| TTTGTTGGTGTGGTACTGGT+AGG | 0.580564 | tig0012157:-13106 | None:intergenic |
| TTTACCAAAAGGTCGCGCTA+CGG | 0.586063 | tig0012157:+14042 | Msa1351190:CDS |
| CCCTAGAAGCTGAAATGAGT+CGG | 0.588600 | tig0012157:-13989 | None:intergenic |
| GTGGCTTAATGCTGCAGCTG+CGG | 0.592462 | tig0012157:+13930 | Msa1351190:CDS |
| GACCTACCTGATCTGGACAA+TGG | 0.594367 | tig0012157:+14429 | Msa1351190:CDS |
| AGCTTCTAGGGATGGCTGAG+AGG | 0.595536 | tig0012157:+14001 | Msa1351190:CDS |
| TAGAAGATGATGAAGATGAG+AGG | 0.601071 | tig0012157:-13154 | None:intergenic |
| TCAGCTTTAGGACCTTATTG+GGG | 0.602003 | tig0012157:+13352 | Msa1351190:CDS |
| TCAAGGCCTTATAAGGTACC+GGG | 0.605703 | tig0012157:+14225 | Msa1351190:CDS |
| AACCAATCAATATTGTAGGT+GGG | 0.606006 | tig0012157:-14278 | None:intergenic |
| GAAAACTATGAATCCAAGAA+GGG | 0.606263 | tig0012157:-13239 | None:intergenic |
| ATCTTCTATGAAGTGTCTGG+AGG | 0.631099 | tig0012157:+13169 | Msa1351190:CDS |
| CGCGGTTCCAGTGGACCGCG+CGG | 0.639341 | tig0012157:+13846 | Msa1351190:CDS |
| AATCCAAGAAGGGTTAAGAG+AGG | 0.667612 | tig0012157:-13229 | None:intergenic |
| CTTCTAGGGATGGCTGAGAG+GGG | 0.668163 | tig0012157:+14003 | Msa1351190:CDS |
| AAGGCCTTATAAGGTACCGG+GGG | 0.671895 | tig0012157:+14227 | Msa1351190:CDS |
| TGAAAGTAAAATCACACCGG+AGG | 0.691386 | tig0012157:-14094 | None:intergenic |
| CCATGAAAGTAAAATCACAC+CGG | 0.697705 | tig0012157:-14097 | None:intergenic |
| CCCCATTGTCCAGATCAGGT+AGG | 0.702852 | tig0012157:-14431 | None:intergenic |
| ACCCGTCACTCCAAGCCGCG+CGG | 0.707480 | tig0012157:-13861 | None:intergenic |
| CAAGGCCTTATAAGGTACCG+GGG | 0.713763 | tig0012157:+14226 | Msa1351190:CDS |
| CCTACCTGATCTGGACAATG+GGG | 0.745924 | tig0012157:+14431 | Msa1351190:CDS |
| ACAATGTTCCCTGAAAACAG+TGG | 0.765904 | tig0012157:+13310 | Msa1351190:CDS |
| AGGCCTTATAAGGTACCGGG+GGG | 0.789499 | tig0012157:+14228 | Msa1351190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0012157:13132-13151 | None:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0012157:13523-13542 | Msa1351190:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0012157:13615-13634 | Msa1351190:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0012157:13659-13678 | Msa1351190:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0012157:13686-13705 | Msa1351190:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0012157:13701-13720 | Msa1351190:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0012157:13702-13721 | Msa1351190:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0012157:13783-13802 | Msa1351190:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0012157:14071-14090 | Msa1351190:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0012157:14287-14306 | Msa1351190:CDS | 20.0% |
| !!! | GAATTGAAATTTTCTTGATT+TGG | - | tig0012157:13132-13151 | None:intergenic | 20.0% |
| !!! | CTAACTATTTTGAATTATAG+AGG | + | tig0012157:13523-13542 | Msa1351190:CDS | 20.0% |
| !! | ATTTATTTCAATTCCTAAGT+TGG | + | tig0012157:13615-13634 | Msa1351190:CDS | 20.0% |
| !! | TGGATTTAAAAGATATTGAT+TGG | + | tig0012157:13659-13678 | Msa1351190:CDS | 20.0% |
| !!! | TGTATTTGAATACTCTTTTT+TGG | + | tig0012157:13686-13705 | Msa1351190:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTAACTAT+TGG | + | tig0012157:13701-13720 | Msa1351190:CDS | 20.0% |
| !!! | TTTTTGGAATCTTAACTATT+GGG | + | tig0012157:13702-13721 | Msa1351190:CDS | 20.0% |
| !!! | TTTGTTTTATGCTTTGATTT+TGG | + | tig0012157:13783-13802 | Msa1351190:CDS | 20.0% |
| !!! | TATTATAGGGATACTTTTTT+CGG | + | tig0012157:14071-14090 | Msa1351190:CDS | 20.0% |
| !!! | AATATTGATTGGTTTTGTAT+TGG | + | tig0012157:14287-14306 | Msa1351190:CDS | 20.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0012157:13124-13143 | None:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0012157:13251-13270 | Msa1351190:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0012157:13433-13452 | None:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0012157:13538-13557 | Msa1351190:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0012157:13592-13611 | Msa1351190:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0012157:13601-13620 | None:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0012157:13778-13797 | None:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0012157:14072-14091 | None:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0012157:14147-14166 | Msa1351190:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0012157:14208-14227 | Msa1351190:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0012157:14285-14304 | None:intergenic | 25.0% |
| !!! | ATTTTCTTGATTTGGTTTGT+TGG | - | tig0012157:13124-13143 | None:intergenic | 25.0% |
| !! | TCATAGTTTTCCCATTTATA+TGG | + | tig0012157:13251-13270 | Msa1351190:CDS | 25.0% |
| ! | AGATAATCAAGAAACAAAAC+TGG | - | tig0012157:13433-13452 | None:intergenic | 25.0% |
| ! | TATAGAGGTTTAACTATTGT+TGG | + | tig0012157:13538-13557 | Msa1351190:CDS | 25.0% |
| !!! | TTACTTCCTTTTGTTGTTAT+GGG | + | tig0012157:13592-13611 | Msa1351190:CDS | 25.0% |
| ! | ATAAATCCCATAACAACAAA+AGG | - | tig0012157:13601-13620 | None:intergenic | 25.0% |
| ! | AAAGCATAAAACAAACCTTT+AGG | - | tig0012157:13778-13797 | None:intergenic | 25.0% |
| !!! | GAAAAAAGTATCCCTATAAT+AGG | - | tig0012157:14072-14091 | None:intergenic | 25.0% |
| !! | GAAAATTTCTTGTACTCTTT+TGG | + | tig0012157:14147-14166 | Msa1351190:CDS | 25.0% |
| ! | TTAAAAAACCAAATGCATCA+AGG | + | tig0012157:14208-14227 | Msa1351190:CDS | 25.0% |
| ! | ACAAAACCAATCAATATTGT+AGG | - | tig0012157:14285-14304 | None:intergenic | 25.0% |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0012157:13242-13261 | None:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0012157:13323-13342 | Msa1351190:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0012157:13324-13343 | Msa1351190:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0012157:13560-13579 | Msa1351190:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0012157:13591-13610 | Msa1351190:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0012157:13724-13743 | Msa1351190:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0012157:13794-13813 | Msa1351190:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0012157:13817-13836 | Msa1351190:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0012157:13889-13908 | Msa1351190:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0012157:14119-14138 | Msa1351190:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0012157:14281-14300 | None:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0012157:14282-14301 | None:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0012157:14332-14351 | Msa1351190:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0012157:14385-14404 | Msa1351190:CDS | 30.0% | |
| GAAAACTATGAATCCAAGAA+GGG | - | tig0012157:13242-13261 | None:intergenic | 30.0% | |
| AAAACAGTGGTTATGTTGTT+TGG | + | tig0012157:13323-13342 | Msa1351190:CDS | 30.0% | |
| ! | AAACAGTGGTTATGTTGTTT+GGG | + | tig0012157:13324-13343 | Msa1351190:CDS | 30.0% |
| !!! | GTTTTGTTGCTGTTTGTTTA+GGG | + | tig0012157:13560-13579 | Msa1351190:CDS | 30.0% |
| !!! | GTTACTTCCTTTTGTTGTTA+TGG | + | tig0012157:13591-13610 | Msa1351190:CDS | 30.0% |
| GATTCTATAAGTACTCTTGT+TGG | + | tig0012157:13724-13743 | Msa1351190:CDS | 30.0% | |
| !!! | CTTTGATTTTGGTTGTTAGT+GGG | + | tig0012157:13794-13813 | Msa1351190:CDS | 30.0% |
| ! | TATCTGTTTCCTCTTTTTGT+TGG | + | tig0012157:13817-13836 | Msa1351190:CDS | 30.0% |
| TCAGATATTGCTATGATCAT+TGG | + | tig0012157:13889-13908 | Msa1351190:CDS | 30.0% | |
| !!! | GCTTAGTTTTGATGAAATTG+TGG | + | tig0012157:14119-14138 | Msa1351190:CDS | 30.0% |
| AACCAATCAATATTGTAGGT+GGG | - | tig0012157:14281-14300 | None:intergenic | 30.0% | |
| AAACCAATCAATATTGTAGG+TGG | - | tig0012157:14282-14301 | None:intergenic | 30.0% | |
| ! | TGTTATAAGTGTCATTGCTA+TGG | + | tig0012157:14332-14351 | Msa1351190:CDS | 30.0% |
| AATTTGTGGAGAGAAAGAAA+TGG | + | tig0012157:14385-14404 | Msa1351190:CDS | 30.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0012157:13157-13176 | None:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0012157:13166-13185 | Msa1351190:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0012157:13243-13262 | None:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0012157:13264-13283 | None:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0012157:13265-13284 | None:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0012157:13321-13340 | None:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0012157:13322-13341 | None:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0012157:13351-13370 | Msa1351190:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0012157:13460-13479 | Msa1351190:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0012157:13559-13578 | Msa1351190:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0012157:13630-13649 | Msa1351190:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0012157:13743-13762 | Msa1351190:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0012157:13793-13812 | Msa1351190:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0012157:13892-13911 | Msa1351190:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0012157:14100-14119 | None:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0012157:14219-14238 | None:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0012157:14218-14237 | Msa1351190:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0012157:14276-14295 | Msa1351190:CDS | 35.0% | |
| TAGAAGATGATGAAGATGAG+AGG | - | tig0012157:13157-13176 | None:intergenic | 35.0% | |
| ! | ATCATCTTCTATGAAGTGTC+TGG | + | tig0012157:13166-13185 | Msa1351190:CDS | 35.0% |
| GGAAAACTATGAATCCAAGA+AGG | - | tig0012157:13243-13262 | None:intergenic | 35.0% | |
| CAGGGATACTCCATATAAAT+GGG | - | tig0012157:13264-13283 | None:intergenic | 35.0% | |
| TCAGGGATACTCCATATAAA+TGG | - | tig0012157:13265-13284 | None:intergenic | 35.0% | |
| ! | CAACATAACCACTGTTTTCA+GGG | - | tig0012157:13321-13340 | None:intergenic | 35.0% |
| ! | ACAACATAACCACTGTTTTC+AGG | - | tig0012157:13322-13341 | None:intergenic | 35.0% |
| !! | ATCAGCTTTAGGACCTTATT+GGG | + | tig0012157:13351-13370 | Msa1351190:CDS | 35.0% |
| !! | ACTATTCCAGCTTTAGAAAG+TGG | + | tig0012157:13460-13479 | Msa1351190:CDS | 35.0% |
| !!! | GGTTTTGTTGCTGTTTGTTT+AGG | + | tig0012157:13559-13578 | Msa1351190:CDS | 35.0% |
| ! | TAAGTTGGAACCATCAAGAT+GGG | + | tig0012157:13630-13649 | Msa1351190:CDS | 35.0% |
| TTGGTGAAGTTGAAAATCCA+AGG | + | tig0012157:13743-13762 | Msa1351190:CDS | 35.0% | |
| !!! | GCTTTGATTTTGGTTGTTAG+TGG | + | tig0012157:13793-13812 | Msa1351190:CDS | 35.0% |
| GATATTGCTATGATCATTGG+TGG | + | tig0012157:13892-13911 | Msa1351190:CDS | 35.0% | |
| CCATGAAAGTAAAATCACAC+CGG | - | tig0012157:14100-14119 | None:intergenic | 35.0% | |
| TTATAAGGCCTTGATGCATT+TGG | - | tig0012157:14219-14238 | None:intergenic | 35.0% | |
| ! | AAATGCATCAAGGCCTTATA+AGG | + | tig0012157:14218-14237 | Msa1351190:CDS | 35.0% |
| ATCCCACCTACAATATTGAT+TGG | + | tig0012157:14276-14295 | Msa1351190:CDS | 35.0% | |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0012157:13119-13138 | None:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0012157:13169-13188 | Msa1351190:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0012157:13232-13251 | None:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0012157:13310-13329 | Msa1351190:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0012157:13340-13359 | Msa1351190:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0012157:13350-13369 | Msa1351190:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0012157:13352-13371 | Msa1351190:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0012157:13377-13396 | Msa1351190:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0012157:13381-13400 | None:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0012157:13385-13404 | Msa1351190:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0012157:13490-13509 | None:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0012157:13487-13506 | Msa1351190:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0012157:13631-13650 | None:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0012157:13629-13648 | Msa1351190:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0012157:13763-13782 | None:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0012157:13760-13779 | Msa1351190:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0012157:13823-13842 | Msa1351190:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0012157:14031-14050 | Msa1351190:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0012157:14036-14055 | None:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0012157:14097-14116 | None:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0012157:14097-14116 | Msa1351190:CDS | 40.0% |
| ! | ATCAAGGCCTTATAAGGTAC+CGG | + | tig0012157:14224-14243 | Msa1351190:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0012157:14339-14358 | Msa1351190:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0012157:14378-14397 | None:intergenic | 40.0% |
| !! | CTTGATTTGGTTTGTTGGTG+TGG | - | tig0012157:13119-13138 | None:intergenic | 40.0% |
| ! | ATCTTCTATGAAGTGTCTGG+AGG | + | tig0012157:13169-13188 | Msa1351190:CDS | 40.0% |
| AATCCAAGAAGGGTTAAGAG+AGG | - | tig0012157:13232-13251 | None:intergenic | 40.0% | |
| ACAATGTTCCCTGAAAACAG+TGG | + | tig0012157:13310-13329 | Msa1351190:CDS | 40.0% | |
| ! | GTTTGGGTTTCATCAGCTTT+AGG | + | tig0012157:13340-13359 | Msa1351190:CDS | 40.0% |
| !! | CATCAGCTTTAGGACCTTAT+TGG | + | tig0012157:13350-13369 | Msa1351190:CDS | 40.0% |
| !! | TCAGCTTTAGGACCTTATTG+GGG | + | tig0012157:13352-13371 | Msa1351190:CDS | 40.0% |
| TCCAACAAGGTTGGATGAAA+TGG | + | tig0012157:13377-13396 | Msa1351190:CDS | 40.0% | |
| TCCATTTCATCCAACCTTGT+TGG | - | tig0012157:13381-13400 | None:intergenic | 40.0% | |
| !! | GGTTGGATGAAATGGATTAG+TGG | + | tig0012157:13385-13404 | Msa1351190:CDS | 40.0% |
| CCTAATGTTGCCAAAACTCT+AGG | - | tig0012157:13490-13509 | None:intergenic | 40.0% | |
| !! | CCTAGAGTTTTGGCAACATT+AGG | + | tig0012157:13487-13506 | Msa1351190:CDS | 40.0% |
| ! | CATCTTGATGGTTCCAACTT+AGG | - | tig0012157:13631-13650 | None:intergenic | 40.0% |
| ! | CTAAGTTGGAACCATCAAGA+TGG | + | tig0012157:13629-13648 | Msa1351190:CDS | 40.0% |
| !!! | CCTTTAGGAAGTGTTTTCCT+TGG | - | tig0012157:13763-13782 | None:intergenic | 40.0% |
| CCAAGGAAAACACTTCCTAA+AGG | + | tig0012157:13760-13779 | Msa1351190:CDS | 40.0% | |
| ! | TTTCCTCTTTTTGTTGGCAC+CGG | + | tig0012157:13823-13842 | Msa1351190:CDS | 40.0% |
| TGCCTGAGTTCTTTACCAAA+AGG | + | tig0012157:14031-14050 | Msa1351190:CDS | 40.0% | |
| ! | GACCTTTTGGTAAAGAACTC+AGG | - | tig0012157:14036-14055 | None:intergenic | 40.0% |
| TGAAAGTAAAATCACACCGG+AGG | - | tig0012157:14097-14116 | None:intergenic | 40.0% | |
| ! | CCGGTGTGATTTTACTTTCA+TGG | + | tig0012157:14097-14116 | Msa1351190:CDS | 40.0% |
| ! | ATCAAGGCCTTATAAGGTAC+CGG | + | tig0012157:14224-14243 | Msa1351190:CDS | 40.0% |
| ! | AGTGTCATTGCTATGGTGAT+TGG | + | tig0012157:14339-14358 | Msa1351190:CDS | 40.0% |
| ! | CTCTCCACAAATTTGAGACA+AGG | - | tig0012157:14378-14397 | None:intergenic | 40.0% |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0012157:13109-13128 | None:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0012157:13113-13132 | None:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0012157:13196-13215 | None:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0012157:13285-13304 | Msa1351190:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0012157:13286-13305 | Msa1351190:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0012157:13290-13309 | None:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0012157:13367-13386 | None:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0012157:13364-13383 | Msa1351190:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0012157:13368-13387 | Msa1351190:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0012157:13464-13483 | Msa1351190:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0012157:13639-13658 | Msa1351190:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0012157:13643-13662 | None:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0012157:13899-13918 | Msa1351190:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0012157:13992-14011 | None:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0012157:13989-14008 | Msa1351190:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0012157:13993-14012 | Msa1351190:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0012157:14042-14061 | Msa1351190:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0012157:14058-14077 | Msa1351190:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+GGG | + | tig0012157:14225-14244 | Msa1351190:CDS | 45.0% |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0012157:14371-14390 | Msa1351190:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0012157:14430-14449 | Msa1351190:CDS | 45.0% | |
| !! | TTTGTTGGTGTGGTACTGGT+AGG | - | tig0012157:13109-13128 | None:intergenic | 45.0% |
| !! | TTGGTTTGTTGGTGTGGTAC+TGG | - | tig0012157:13113-13132 | None:intergenic | 45.0% |
| ACTGCATCCTCTGAACCAAA+TGG | - | tig0012157:13196-13215 | None:intergenic | 45.0% | |
| AGCCTTGATCACTGCTGAAA+TGG | + | tig0012157:13285-13304 | Msa1351190:CDS | 45.0% | |
| GCCTTGATCACTGCTGAAAT+GGG | + | tig0012157:13286-13305 | Msa1351190:CDS | 45.0% | |
| TCCCATTTCAGCAGTGATCA+AGG | - | tig0012157:13290-13309 | None:intergenic | 45.0% | |
| CCTTGTTGGAAACCCCAATA+AGG | - | tig0012157:13367-13386 | None:intergenic | 45.0% | |
| CCTTATTGGGGTTTCCAACA+AGG | + | tig0012157:13364-13383 | Msa1351190:CDS | 45.0% | |
| ATTGGGGTTTCCAACAAGGT+TGG | + | tig0012157:13368-13387 | Msa1351190:CDS | 45.0% | |
| !! | TTCCAGCTTTAGAAAGTGGC+TGG | + | tig0012157:13464-13483 | Msa1351190:CDS | 45.0% |
| !! | ACCATCAAGATGGGTTGAAG+TGG | + | tig0012157:13639-13658 | Msa1351190:CDS | 45.0% |
| TCCACTTCAACCCATCTTGA+TGG | - | tig0012157:13643-13662 | None:intergenic | 45.0% | |
| CTATGATCATTGGTGGAGCT+TGG | + | tig0012157:13899-13918 | Msa1351190:CDS | 45.0% | |
| CCCTAGAAGCTGAAATGAGT+CGG | - | tig0012157:13992-14011 | None:intergenic | 45.0% | |
| CCGACTCATTTCAGCTTCTA+GGG | + | tig0012157:13989-14008 | Msa1351190:CDS | 45.0% | |
| ! | CTCATTTCAGCTTCTAGGGA+TGG | + | tig0012157:13993-14012 | Msa1351190:CDS | 45.0% |
| TTTACCAAAAGGTCGCGCTA+CGG | + | tig0012157:14042-14061 | Msa1351190:CDS | 45.0% | |
| GCTACGGTACGCCTATTATA+GGG | + | tig0012157:14058-14077 | Msa1351190:CDS | 45.0% | |
| ! | TCAAGGCCTTATAAGGTACC+GGG | + | tig0012157:14225-14244 | Msa1351190:CDS | 45.0% |
| ! | GCAGCCTTGTCTCAAATTTG+TGG | + | tig0012157:14371-14390 | Msa1351190:CDS | 45.0% |
| ACCTACCTGATCTGGACAAT+GGG | + | tig0012157:14430-14449 | Msa1351190:CDS | 45.0% | |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0012157:13178-13197 | Msa1351190:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0012157:13186-13205 | Msa1351190:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0012157:13205-13224 | Msa1351190:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0012157:13226-13245 | Msa1351190:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0012157:13282-13301 | None:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0012157:13283-13302 | None:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0012157:13477-13496 | Msa1351190:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0012157:13908-13927 | Msa1351190:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0012157:13988-14007 | Msa1351190:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0012157:14057-14076 | Msa1351190:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0012157:14078-14097 | Msa1351190:CDS | 50.0% |
| !! | CAAGGCCTTATAAGGTACCG+GGG | + | tig0012157:14226-14245 | Msa1351190:CDS | 50.0% |
| !! | AAGGCCTTATAAGGTACCGG+GGG | + | tig0012157:14227-14246 | Msa1351190:CDS | 50.0% |
| TTACCCCCCGGTACCTTATA+AGG | - | tig0012157:14234-14253 | None:intergenic | 50.0% | |
| ATTGCTCCAACTTTACCCCC+CGG | - | tig0012157:14246-14265 | None:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0012157:14422-14441 | Msa1351190:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0012157:14429-14448 | None:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0012157:14429-14448 | Msa1351190:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0012157:14431-14450 | Msa1351190:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0012157:14449-14468 | Msa1351190:CDS | 50.0% |
| ! | GAAGTGTCTGGAGGACCATT+TGG | + | tig0012157:13178-13197 | Msa1351190:CDS | 50.0% |
| ! | TGGAGGACCATTTGGTTCAG+AGG | + | tig0012157:13186-13205 | Msa1351190:CDS | 50.0% |
| GAGGATGCAGTAAAAGCAGC+TGG | + | tig0012157:13205-13224 | Msa1351190:CDS | 50.0% | |
| GGTCCTCTCTTAACCCTTCT+TGG | + | tig0012157:13226-13245 | Msa1351190:CDS | 50.0% | |
| CAGCAGTGATCAAGGCTTCA+GGG | - | tig0012157:13282-13301 | None:intergenic | 50.0% | |
| TCAGCAGTGATCAAGGCTTC+AGG | - | tig0012157:13283-13302 | None:intergenic | 50.0% | |
| !!! | AAGTGGCTGGCCTAGAGTTT+TGG | + | tig0012157:13477-13496 | Msa1351190:CDS | 50.0% |
| TTGGTGGAGCTTGGTTGAGA+TGG | + | tig0012157:13908-13927 | Msa1351190:CDS | 50.0% | |
| ! | GCCGACTCATTTCAGCTTCT+AGG | + | tig0012157:13988-14007 | Msa1351190:CDS | 50.0% |
| CGCTACGGTACGCCTATTAT+AGG | + | tig0012157:14057-14076 | Msa1351190:CDS | 50.0% | |
| !!! | GGGATACTTTTTTCGGCCTC+CGG | + | tig0012157:14078-14097 | Msa1351190:CDS | 50.0% |
| !! | CAAGGCCTTATAAGGTACCG+GGG | + | tig0012157:14226-14245 | Msa1351190:CDS | 50.0% |
| !! | AAGGCCTTATAAGGTACCGG+GGG | + | tig0012157:14227-14246 | Msa1351190:CDS | 50.0% |
| TTACCCCCCGGTACCTTATA+AGG | - | tig0012157:14234-14253 | None:intergenic | 50.0% | |
| ATTGCTCCAACTTTACCCCC+CGG | - | tig0012157:14246-14265 | None:intergenic | 50.0% | |
| TAGTCCTGACCTACCTGATC+TGG | + | tig0012157:14422-14441 | Msa1351190:CDS | 50.0% | |
| TTGTCCAGATCAGGTAGGTC+AGG | - | tig0012157:14429-14448 | None:intergenic | 50.0% | |
| GACCTACCTGATCTGGACAA+TGG | + | tig0012157:14429-14448 | Msa1351190:CDS | 50.0% | |
| CCTACCTGATCTGGACAATG+GGG | + | tig0012157:14431-14450 | Msa1351190:CDS | 50.0% | |
| ! | TGGGGAGAGCACACAAACAT+TGG | + | tig0012157:14449-14468 | Msa1351190:CDS | 50.0% |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0012157:13469-13488 | None:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0012157:13828-13847 | Msa1351190:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0012157:13911-13930 | Msa1351190:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0012157:13930-13949 | Msa1351190:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0012157:13942-13961 | Msa1351190:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0012157:13943-13962 | Msa1351190:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0012157:14001-14020 | Msa1351190:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0012157:14002-14021 | Msa1351190:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0012157:14003-14022 | Msa1351190:CDS | 55.0% |
| !! | AGGCCTTATAAGGTACCGGG+GGG | + | tig0012157:14228-14247 | Msa1351190:CDS | 55.0% |
| !! | AAGGTACCGGGGGGTAAAGT+TGG | + | tig0012157:14237-14256 | Msa1351190:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0012157:14434-14453 | None:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0012157:14438-14457 | None:intergenic | 55.0% | |
| !! | GGCCAGCCACTTTCTAAAGC+TGG | - | tig0012157:13469-13488 | None:intergenic | 55.0% |
| !!! | TCTTTTTGTTGGCACCGGCG+CGG | + | tig0012157:13828-13847 | Msa1351190:CDS | 55.0% |
| GTGGAGCTTGGTTGAGATGG+TGG | + | tig0012157:13911-13930 | Msa1351190:CDS | 55.0% | |
| GTGGCTTAATGCTGCAGCTG+CGG | + | tig0012157:13930-13949 | Msa1351190:CDS | 55.0% | |
| ! | TGCAGCTGCGGTGTCGAATA+TGG | + | tig0012157:13942-13961 | Msa1351190:CDS | 55.0% |
| ! | GCAGCTGCGGTGTCGAATAT+GGG | + | tig0012157:13943-13962 | Msa1351190:CDS | 55.0% |
| ! | AGCTTCTAGGGATGGCTGAG+AGG | + | tig0012157:14001-14020 | Msa1351190:CDS | 55.0% |
| ! | GCTTCTAGGGATGGCTGAGA+GGG | + | tig0012157:14002-14021 | Msa1351190:CDS | 55.0% |
| ! | CTTCTAGGGATGGCTGAGAG+GGG | + | tig0012157:14003-14022 | Msa1351190:CDS | 55.0% |
| !! | AGGCCTTATAAGGTACCGGG+GGG | + | tig0012157:14228-14247 | Msa1351190:CDS | 55.0% |
| !! | AAGGTACCGGGGGGTAAAGT+TGG | + | tig0012157:14237-14256 | Msa1351190:CDS | 55.0% |
| CCCCATTGTCCAGATCAGGT+AGG | - | tig0012157:14434-14453 | None:intergenic | 55.0% | |
| CTCTCCCCATTGTCCAGATC+AGG | - | tig0012157:14438-14457 | None:intergenic | 55.0% | |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0012157:13829-13848 | None:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0012157:14049-14068 | None:intergenic | 60.0% |
| ! | GCGCCGGTGCCAACAAAAAG+AGG | - | tig0012157:13829-13848 | None:intergenic | 60.0% |
| ! | CGTACCGTAGCGCGACCTTT+TGG | - | tig0012157:14049-14068 | None:intergenic | 60.0% |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0012157:13851-13870 | Msa1351190:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0012157:13859-13878 | Msa1351190:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0012157:13860-13879 | Msa1351190:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0012157:13864-13883 | None:intergenic | 70.0% | |
| TTCCAGTGGACCGCGCGGCT+TGG | + | tig0012157:13851-13870 | Msa1351190:CDS | 70.0% | |
| ! | GACCGCGCGGCTTGGAGTGA+CGG | + | tig0012157:13859-13878 | Msa1351190:CDS | 70.0% |
| ! | ACCGCGCGGCTTGGAGTGAC+GGG | + | tig0012157:13860-13879 | Msa1351190:CDS | 70.0% |
| ACCCGTCACTCCAAGCCGCG+CGG | - | tig0012157:13864-13883 | None:intergenic | 70.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0012157:13837-13856 | Msa1351190:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0012157:13845-13864 | None:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0012157:13846-13865 | Msa1351190:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0012157:13856-13875 | None:intergenic | 75.0% | |
| !! | TGGCACCGGCGCGGTTCCAG+TGG | + | tig0012157:13837-13856 | Msa1351190:CDS | 75.0% |
| GCGGTCCACTGGAACCGCGC+CGG | - | tig0012157:13845-13864 | None:intergenic | 75.0% | |
| CGCGGTTCCAGTGGACCGCG+CGG | + | tig0012157:13846-13865 | Msa1351190:CDS | 75.0% | |
| CTCCAAGCCGCGCGGTCCAC+TGG | - | tig0012157:13856-13875 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012157 | gene | 13088 | 14479 | 13088 | ID=Msa1351190;Name=Msa1351190 |
| tig0012157 | mRNA | 13088 | 14479 | 13088 | ID=Msa1351190-mRNA-1;Parent=Msa1351190;Name=Msa1351190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|463 |
| tig0012157 | exon | 13088 | 14479 | 13088 | ID=Msa1351190-mRNA-1:exon:7660;Parent=Msa1351190-mRNA-1 |
| tig0012157 | CDS | 13088 | 14479 | 13088 | ID=Msa1351190-mRNA-1:cds;Parent=Msa1351190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
