Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390320 | XP_013468984.1 | 93.961 | 414 | 15 | 2 | 1 | 406 | 1 | 412 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390320 | sp|Q99090|CPRF2_PETCR | 54.118 | 425 | 152 | 11 | 1 | 406 | 1 | 401 | 4.36e-119 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390320 | A0A072VN13 | 93.961 | 414 | 15 | 2 | 1 | 406 | 1 | 412 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1390320 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032360 | Msa1390320 | 0.955665 | 1.796978e-113 | -8.615850e-47 |
| Msa0172360 | Msa1390320 | 0.976099 | 3.502583e-141 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390320 | MtrunA17_Chr1g0190761 | 93.961 | 414 | 15 | 2 | 1 | 406 | 1 | 412 | 0.0 | 743 |
| Msa1390320 | MtrunA17_Chr7g0274141 | 54.839 | 403 | 153 | 9 | 1 | 393 | 1 | 384 | 1.30e-121 | 358 |
| Msa1390320 | MtrunA17_Chr3g0139301 | 52.593 | 135 | 57 | 4 | 169 | 299 | 96 | 227 | 1.90e-30 | 118 |
| Msa1390320 | MtrunA17_Chr1g0147491 | 59.504 | 121 | 45 | 2 | 172 | 292 | 143 | 259 | 4.79e-27 | 110 |
| Msa1390320 | MtrunA17_Chr3g0139571 | 59.459 | 74 | 30 | 0 | 201 | 274 | 1 | 74 | 1.55e-17 | 77.0 |
| Msa1390320 | MtrunA17_Chr4g0035414 | 41.304 | 92 | 54 | 0 | 200 | 291 | 28 | 119 | 3.84e-14 | 69.7 |
| Msa1390320 | MtrunA17_Chr7g0225661 | 41.346 | 104 | 55 | 1 | 171 | 274 | 59 | 156 | 7.99e-14 | 69.7 |
| Msa1390320 | MtrunA17_Chr8g0341311 | 45.055 | 91 | 45 | 1 | 184 | 274 | 61 | 146 | 8.13e-14 | 69.3 |
| Msa1390320 | MtrunA17_Chr3g0144941 | 38.043 | 92 | 57 | 0 | 200 | 291 | 28 | 119 | 1.41e-13 | 68.2 |
| Msa1390320 | MtrunA17_Chr6g0456061 | 47.297 | 74 | 39 | 0 | 202 | 275 | 90 | 163 | 2.13e-13 | 68.6 |
| Msa1390320 | MtrunA17_Chr8g0378901 | 31.092 | 119 | 79 | 1 | 173 | 291 | 9 | 124 | 1.83e-12 | 65.1 |
| Msa1390320 | MtrunA17_Chr1g0155551 | 30.000 | 160 | 92 | 4 | 172 | 318 | 7 | 159 | 2.04e-11 | 62.0 |
| Msa1390320 | MtrunA17_Chr8g0373571 | 43.529 | 85 | 46 | 1 | 186 | 270 | 248 | 330 | 2.28e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390320 | AT5G28770.2 | 45.340 | 397 | 129 | 14 | 1 | 394 | 1 | 312 | 2.04e-76 | 240 |
| Msa1390320 | AT5G28770.1 | 44.584 | 397 | 125 | 15 | 1 | 394 | 1 | 305 | 1.04e-71 | 228 |
| Msa1390320 | AT5G28770.3 | 49.275 | 276 | 89 | 9 | 1 | 275 | 1 | 226 | 5.29e-57 | 187 |
| Msa1390320 | AT4G02640.3 | 39.634 | 328 | 145 | 5 | 1 | 291 | 1 | 312 | 3.47e-49 | 172 |
| Msa1390320 | AT4G02640.2 | 39.634 | 328 | 145 | 5 | 1 | 291 | 1 | 312 | 4.04e-49 | 172 |
| Msa1390320 | AT4G02640.4 | 39.634 | 328 | 139 | 5 | 1 | 291 | 1 | 306 | 8.64e-49 | 171 |
| Msa1390320 | AT4G02640.1 | 39.634 | 328 | 139 | 5 | 1 | 291 | 1 | 306 | 1.15e-48 | 171 |
| Msa1390320 | AT3G54620.1 | 38.965 | 367 | 143 | 14 | 1 | 314 | 1 | 339 | 6.67e-44 | 157 |
| Msa1390320 | AT5G24800.1 | 44.444 | 189 | 92 | 5 | 131 | 310 | 51 | 235 | 4.59e-37 | 136 |
| Msa1390320 | AT5G28770.4 | 45.643 | 241 | 72 | 10 | 1 | 236 | 1 | 187 | 3.37e-34 | 127 |
| Msa1390320 | AT3G54620.3 | 37.057 | 367 | 133 | 16 | 1 | 314 | 1 | 322 | 3.48e-29 | 117 |
| Msa1390320 | AT2G18160.1 | 41.758 | 91 | 53 | 0 | 194 | 284 | 23 | 113 | 3.72e-14 | 70.5 |
| Msa1390320 | AT2G04038.1 | 43.617 | 94 | 48 | 1 | 181 | 274 | 58 | 146 | 6.54e-13 | 67.0 |
| Msa1390320 | AT1G75390.1 | 36.522 | 115 | 68 | 1 | 197 | 311 | 36 | 145 | 9.78e-13 | 66.6 |
| Msa1390320 | AT3G30530.1 | 37.864 | 103 | 60 | 1 | 172 | 274 | 55 | 153 | 2.82e-12 | 65.1 |
| Msa1390320 | AT1G13600.1 | 45.333 | 75 | 41 | 0 | 200 | 274 | 84 | 158 | 9.45e-12 | 64.3 |
| Msa1390320 | AT3G62420.1 | 32.692 | 104 | 60 | 1 | 199 | 302 | 22 | 115 | 1.43e-11 | 62.4 |
| Msa1390320 | AT5G15830.1 | 50.000 | 66 | 27 | 1 | 184 | 249 | 62 | 121 | 5.63e-11 | 61.6 |
Find 142 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGATCCACTTGTTGA+TGG | 0.223100 | tig0021333:-107757 | None:intergenic |
| GCATCTTTATCTTGTAATAT+AGG | 0.256635 | tig0021333:-107670 | None:intergenic |
| CCGCAGAATCAGTGTACTTT+TGG | 0.261444 | tig0021333:-109037 | None:intergenic |
| CCTACAACTGCTGCATTGTT+TGG | 0.276575 | tig0021333:-109969 | None:intergenic |
| TCCAACTTTAGTAGCATTAG+AGG | 0.290868 | tig0021333:-107316 | None:intergenic |
| AATCAAACAAACTCGTTTCC+TGG | 0.311987 | tig0021333:-110448 | None:intergenic |
| TGCACCCCATATCTTCGTTT+GGG | 0.319723 | tig0021333:+110259 | Msa1390320:three_prime_UTR |
| TTGATTCAAACCTTCAGAAA+TGG | 0.321181 | tig0021333:-107346 | None:intergenic |
| GCATTCCCCAAACGAAGATA+TGG | 0.348614 | tig0021333:-110265 | None:intergenic |
| TATGCAGGATCTGTTCCTTC+TGG | 0.364918 | tig0021333:+107637 | Msa1390320:intron |
| ACTTATTCCCTCAAAATGTT+TGG | 0.368104 | tig0021333:+110320 | Msa1390320:three_prime_UTR |
| GCAATTTACTGCTCTCCATT+AGG | 0.372962 | tig0021333:-110098 | None:intergenic |
| CTTTCTTCTTCTTGAGCGCC+TGG | 0.376215 | tig0021333:-108813 | None:intergenic |
| GTTGCACCGGGTGGCTAGCT+TGG | 0.383977 | tig0021333:+110022 | Msa1390320:CDS |
| GTGCACCCCATATCTTCGTT+TGG | 0.386929 | tig0021333:+110258 | Msa1390320:three_prime_UTR |
| TGCGGTGACCATAGGTTGTC+GGG | 0.393062 | tig0021333:-105292 | None:intergenic |
| ACTAAAGCAACCACAAGATA+TGG | 0.405332 | tig0021333:-110120 | None:intergenic |
| CCAAACAATGCAGCAGTTGT+AGG | 0.408840 | tig0021333:+109969 | Msa1390320:CDS |
| TGATTCAAACCTTCAGAAAT+GGG | 0.409793 | tig0021333:-107345 | None:intergenic |
| TCTTGTGGACCTCCTCCTAA+TGG | 0.410328 | tig0021333:+110083 | Msa1390320:CDS |
| GTCAAGAAGTTATTCTTGTC+TGG | 0.411500 | tig0021333:+110141 | Msa1390320:three_prime_UTR |
| CCGTTGATTCCGAAGAATAT+CGG | 0.415030 | tig0021333:+105509 | Msa1390320:CDS |
| TCCTCTAATGCTACTAAAGT+TGG | 0.420756 | tig0021333:+107315 | Msa1390320:CDS |
| ATGGGGATGCCAGCATTTGA+TGG | 0.424587 | tig0021333:+109792 | Msa1390320:CDS |
| GCAGGCTCATTTAACTGAGT+TGG | 0.425028 | tig0021333:+108835 | Msa1390320:CDS |
| GCGCCTGGCTGACTCTCTAT+TGG | 0.428094 | tig0021333:-108798 | None:intergenic |
| ATTCATGTCACCGGCGGCGC+CGG | 0.438697 | tig0021333:+105316 | Msa1390320:CDS |
| CTTTAGGTTTCACAATTAAG+AGG | 0.441246 | tig0021333:+108975 | Msa1390320:intron |
| GAGACTGTGAAAAGAGTTAC+CGG | 0.441519 | tig0021333:+109729 | Msa1390320:CDS |
| CAGAACAGCCCGATATTCTT+CGG | 0.443037 | tig0021333:-105518 | None:intergenic |
| TCCACTTGTTGATGGCCTAA+TGG | 0.446126 | tig0021333:-107749 | None:intergenic |
| GGAAGCGCTGCGACTCATCT+TGG | 0.448544 | tig0021333:-105350 | None:intergenic |
| GAGGACTGTGGTCCATTCTC+AGG | 0.449150 | tig0021333:-107297 | None:intergenic |
| GCCACCGGAGGTGGTCCATT+GGG | 0.449839 | tig0021333:-105487 | None:intergenic |
| CGTTGATTCCGAAGAATATC+GGG | 0.456409 | tig0021333:+105510 | Msa1390320:CDS |
| AAACAGCTCCTCCGTTGCAC+CGG | 0.457579 | tig0021333:+110009 | Msa1390320:CDS |
| TTTGCCCAATGGACCACCTC+CGG | 0.460821 | tig0021333:+105483 | Msa1390320:CDS |
| GGCGGTATGGAAGGGATCGC+AGG | 0.461844 | tig0021333:-107703 | None:intergenic |
| GCGCTGCGGTTGCCATGACT+AGG | 0.462989 | tig0021333:+105563 | Msa1390320:CDS |
| TCTGAAGAGTAAGCTGAATC+AGG | 0.465092 | tig0021333:+105537 | Msa1390320:CDS |
| GAATCAACGGCCACCGGAGG+TGG | 0.465283 | tig0021333:-105496 | None:intergenic |
| AAAGATCTTAAAGATACTAC+TGG | 0.477076 | tig0021333:+110387 | Msa1390320:three_prime_UTR |
| GGCCACCGGAGGTGGTCCAT+TGG | 0.477571 | tig0021333:-105488 | None:intergenic |
| ATGAGAGTCAACAATGGGTT+GGG | 0.479222 | tig0021333:+109918 | Msa1390320:CDS |
| TTCTGCACAGGCGGTATGGA+AGG | 0.484341 | tig0021333:-107712 | None:intergenic |
| GGATTCATCGCCGGCGCCGC+CGG | 0.486207 | tig0021333:-105326 | None:intergenic |
| CATTCCCCAAACGAAGATAT+GGG | 0.490546 | tig0021333:-110264 | None:intergenic |
| ATGCCTGACATGTCATCAAT+GGG | 0.494648 | tig0021333:+109774 | Msa1390320:CDS |
| CAGCTTCTTGCAGAAAGCGT+TGG | 0.498650 | tig0021333:-105384 | None:intergenic |
| GAGTCGCAGCGCTTCCGAAT+GGG | 0.498693 | tig0021333:+105357 | Msa1390320:CDS |
| AAAGCGTTGGAACGCCCATT+CGG | 0.499920 | tig0021333:-105371 | None:intergenic |
| ACGAAATCCCCGACAACCTA+TGG | 0.501904 | tig0021333:+105284 | Msa1390320:CDS |
| TCTTCGGAATCAACGGCCAC+CGG | 0.506977 | tig0021333:-105502 | None:intergenic |
| CATTGCAAATCAATTTAATG+AGG | 0.507385 | tig0021333:+110213 | Msa1390320:three_prime_UTR |
| ATCCCCATTGATGACATGTC+AGG | 0.511654 | tig0021333:-109777 | None:intergenic |
| CTGCGGTGACCATAGGTTGT+CGG | 0.521113 | tig0021333:-105293 | None:intergenic |
| CATCTTCAGAAGCGGATTCG+TGG | 0.522135 | tig0021333:+110047 | Msa1390320:CDS |
| TGCATCTGCTGAATTGTCTG+AGG | 0.523554 | tig0021333:-109820 | None:intergenic |
| GCATCTGCTGAATTGTCTGA+GGG | 0.526766 | tig0021333:-109819 | None:intergenic |
| GAGGGGCTTCCATCAAATGC+TGG | 0.527926 | tig0021333:-109801 | None:intergenic |
| TTCCAACAAACAACATGGAT+AGG | 0.529412 | tig0021333:+105248 | None:intergenic |
| AACAGCTCCTCCGTTGCACC+GGG | 0.530036 | tig0021333:+110010 | Msa1390320:CDS |
| CATGCCTGACATGTCATCAA+TGG | 0.535358 | tig0021333:+109773 | Msa1390320:CDS |
| AGGTGGTCCATTGGGCAAAA+CGG | 0.537410 | tig0021333:-105479 | None:intergenic |
| ATGAAACAATGGGTTCAATC+CGG | 0.537486 | tig0021333:-109748 | None:intergenic |
| TACTGCTCTCCATTAGGAGG+AGG | 0.537865 | tig0021333:-110092 | None:intergenic |
| AAGCTAGCCACCCGGTGCAA+CGG | 0.537945 | tig0021333:-110020 | None:intergenic |
| CAGGCATGACATGAAACAAT+GGG | 0.540921 | tig0021333:-109758 | None:intergenic |
| TATGAGAGTCAACAATGGGT+TGG | 0.540959 | tig0021333:+109917 | Msa1390320:CDS |
| AAGAGGTGAAAATTCTACCT+TGG | 0.544049 | tig0021333:+108992 | Msa1390320:CDS |
| AGTTGTAGGTGGGAACAAGA+TGG | 0.544585 | tig0021333:+109983 | Msa1390320:CDS |
| CGCTGCGGTTGCCATGACTA+GGG | 0.544605 | tig0021333:+105564 | Msa1390320:CDS |
| CTACTGACGTAAAACGAGTA+AGG | 0.544656 | tig0021333:+107839 | Msa1390320:CDS |
| GGATCTCAGCCCATTTCTGA+AGG | 0.545730 | tig0021333:+107336 | Msa1390320:CDS |
| GGCATAGGATTAATAGATGT+GGG | 0.545925 | tig0021333:-109885 | None:intergenic |
| TCCTCTGTTGCTGACAACAC+CGG | 0.546501 | tig0021333:+105427 | Msa1390320:CDS |
| TGAGTCGCAGCGCTTCCGAA+TGG | 0.548231 | tig0021333:+105356 | Msa1390320:CDS |
| CATGAATCTGCGGTGACCAT+AGG | 0.554146 | tig0021333:-105300 | None:intergenic |
| AACAATGCAGCAGTTGTAGG+TGG | 0.555285 | tig0021333:+109972 | Msa1390320:CDS |
| TCTTTATCTTGTAATATAGG+TGG | 0.555696 | tig0021333:-107667 | None:intergenic |
| CAGAAGCGGATTCGTGGTGG+CGG | 0.557372 | tig0021333:+110053 | Msa1390320:CDS |
| GGAAGAAGAAGGAGAAGGTG+TGG | 0.558163 | tig0021333:-105407 | None:intergenic |
| TGGTCCATTCTCAGGAAAAG+TGG | 0.558279 | tig0021333:-107289 | None:intergenic |
| GTTGTAGGTGGGAACAAGAT+GGG | 0.562961 | tig0021333:+109984 | Msa1390320:CDS |
| TTTCCAATAGAGAGTCAGCC+AGG | 0.566133 | tig0021333:+108795 | Msa1390320:CDS |
| CAGTAAATTGCCATATCTTG+TGG | 0.566791 | tig0021333:+110110 | Msa1390320:exon |
| CCGATATTCTTCGGAATCAA+CGG | 0.569768 | tig0021333:-105509 | None:intergenic |
| TGTTTGGTTCATGCGAGGGA+AGG | 0.573126 | tig0021333:+110336 | Msa1390320:three_prime_UTR |
| CTAGCCACCCGGTGCAACGG+AGG | 0.575800 | tig0021333:-110017 | None:intergenic |
| AGGGATCGCAGGTGGTACCT+TGG | 0.576379 | tig0021333:-107692 | None:intergenic |
| TCAGCAACAGAGGAAGAAGA+AGG | 0.578164 | tig0021333:-105418 | None:intergenic |
| GCGCTCAAGAAGAAGAAAGC+AGG | 0.578810 | tig0021333:+108817 | Msa1390320:CDS |
| ACCGGTGTTGTCAGCAACAG+AGG | 0.579200 | tig0021333:-105428 | None:intergenic |
| TCTGCACAGGCGGTATGGAA+GGG | 0.579471 | tig0021333:-107711 | None:intergenic |
| TTTAACTGAGTTGGAAACAC+AGG | 0.582001 | tig0021333:+108844 | Msa1390320:CDS |
| TGGCATAGGATTAATAGATG+TGG | 0.582245 | tig0021333:-109886 | None:intergenic |
| GCCCAATGGACCACCTCCGG+TGG | 0.585880 | tig0021333:+105486 | Msa1390320:CDS |
| TCCAACAAACAACATGGATA+GGG | 0.587093 | tig0021333:+105249 | None:intergenic |
| CATTCTCAGGAAAAGTGGCT+AGG | 0.587934 | tig0021333:-107284 | None:intergenic |
| ATTTACTGCTCTCCATTAGG+AGG | 0.588321 | tig0021333:-110095 | None:intergenic |
| GACATATATGATTGACAGCA+CGG | 0.588439 | tig0021333:+107813 | Msa1390320:CDS |
| CAAAATGTTTGGTTCATGCG+AGG | 0.590432 | tig0021333:+110331 | Msa1390320:three_prime_UTR |
| AAAATGTTTGGTTCATGCGA+GGG | 0.590503 | tig0021333:+110332 | Msa1390320:three_prime_UTR |
| TCAGGCATGACATGAAACAA+TGG | 0.593558 | tig0021333:-109759 | None:intergenic |
| GCACCCCATATCTTCGTTTG+GGG | 0.594035 | tig0021333:+110260 | Msa1390320:three_prime_UTR |
| ATTACAAGATAAAGATGCCA+AGG | 0.595359 | tig0021333:+107675 | Msa1390320:CDS |
| GTCTGATGATGACGAAGCTG+AGG | 0.596500 | tig0021333:+107786 | Msa1390320:CDS |
| AGCTCCTCCGTTGCACCGGG+TGG | 0.597935 | tig0021333:+110013 | Msa1390320:CDS |
| ATGATATGAGAGTCAACAAT+GGG | 0.599172 | tig0021333:+109913 | Msa1390320:CDS |
| TGTTGAAACGTTAAGAGCAA+AGG | 0.608038 | tig0021333:+109085 | Msa1390320:CDS |
| GCCATTAGGCCATCAACAAG+TGG | 0.609169 | tig0021333:+107748 | Msa1390320:CDS |
| AGCGCTGCGACTCATCTTGG+AGG | 0.610597 | tig0021333:-105347 | None:intergenic |
| TCGGAATCAACGGCCACCGG+AGG | 0.611990 | tig0021333:-105499 | None:intergenic |
| GCTTGGAACATCTTCAGAAG+CGG | 0.612188 | tig0021333:+110039 | Msa1390320:CDS |
| CTCATATCATGACATGGCAT+AGG | 0.623120 | tig0021333:-109900 | None:intergenic |
| TCTGATGATGACGAAGCTGA+GGG | 0.626334 | tig0021333:+107787 | Msa1390320:CDS |
| CATCTTGGAGGATTCATCGC+CGG | 0.632617 | tig0021333:-105335 | None:intergenic |
| GATGTTCCAAGCTAGCCACC+CGG | 0.633541 | tig0021333:-110028 | None:intergenic |
| TCACCGCAGATTCATGTCAC+CGG | 0.635057 | tig0021333:+105307 | Msa1390320:CDS |
| ACAGAGGAAGAAGAAGGAGA+AGG | 0.637590 | tig0021333:-105412 | None:intergenic |
| GGTATGGAAGGGATCGCAGG+TGG | 0.640990 | tig0021333:-107700 | None:intergenic |
| CCAAAAGTACACTGATTCTG+CGG | 0.642477 | tig0021333:+109037 | Msa1390320:CDS |
| GCTGAATCAGGCATGCGCTG+CGG | 0.643579 | tig0021333:+105549 | Msa1390320:CDS |
| TGATGTGGATCGTCTTGCAC+AGG | 0.644197 | tig0021333:-109849 | None:intergenic |
| ACAATGCAGCAGTTGTAGGT+GGG | 0.644613 | tig0021333:+109973 | Msa1390320:CDS |
| ATAGGTGGATCGCTTCCAGA+AGG | 0.645523 | tig0021333:-107652 | None:intergenic |
| TGATGGCCTAATGGCAACAA+TGG | 0.646272 | tig0021333:-107740 | None:intergenic |
| GGTTGATAGAAATGATGATG+TGG | 0.646871 | tig0021333:-109864 | None:intergenic |
| GCGGTGACCATAGGTTGTCG+GGG | 0.657758 | tig0021333:-105291 | None:intergenic |
| ATCAGTAAGACGCTTTACCA+AGG | 0.660921 | tig0021333:-109009 | None:intergenic |
| TTGACTCTCATATCATGACA+TGG | 0.663706 | tig0021333:-109906 | None:intergenic |
| CTTCAGAAGCGGATTCGTGG+TGG | 0.671591 | tig0021333:+110050 | Msa1390320:CDS |
| CCGCCGGTGACATGAATCTG+CGG | 0.671643 | tig0021333:-105310 | None:intergenic |
| CCGCAGATTCATGTCACCGG+CGG | 0.672407 | tig0021333:+105310 | Msa1390320:CDS |
| TTAGTAGCATTAGAGGACTG+TGG | 0.673158 | tig0021333:-107309 | None:intergenic |
| CATCTGCTGAATTGTCTGAG+GGG | 0.674812 | tig0021333:-109818 | None:intergenic |
| CATGATATGAGAGTCAACAA+TGG | 0.678198 | tig0021333:+109912 | Msa1390320:CDS |
| GGTGGCGGTGTCGATTCTTG+TGG | 0.683085 | tig0021333:+110068 | Msa1390320:CDS |
| ATTCCCCAAACGAAGATATG+GGG | 0.689146 | tig0021333:-110263 | None:intergenic |
| CATGGATAGGGTATTCTCAG+TGG | 0.691390 | tig0021333:+105261 | None:intergenic |
| CTGACGTAAAACGAGTAAGG+AGG | 0.694894 | tig0021333:+107842 | Msa1390320:CDS |
| TGCCTGACATGTCATCAATG+GGG | 0.791811 | tig0021333:+109775 | Msa1390320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAACTAAATTTCAAA+AGG | - | tig0021333:106088-106107 | None:intergenic | 10.0% |
| !! | AAAAAAATATTTATTAACCA+AGG | - | tig0021333:106925-106944 | None:intergenic | 10.0% |
| !!! | CTTACAAATAATATAATTTT+TGG | - | tig0021333:108628-108647 | None:intergenic | 10.0% |
| !!! | TTTTTGTTATTTTTGCATTA+TGG | + | tig0021333:105705-105724 | Msa1390320:intron | 15.0% |
| !!! | TTTTGTTATTTTTGCATTAT+GGG | + | tig0021333:105706-105725 | Msa1390320:intron | 15.0% |
| !! | AAAATAATGCAAAAAGAAAA+TGG | - | tig0021333:106708-106727 | None:intergenic | 15.0% |
| !! | AAAAAGTTTAATGACAATAT+TGG | + | tig0021333:107435-107454 | Msa1390320:intron | 15.0% |
| !! | TTTGAGAGAATAAAAAAAAA+AGG | - | tig0021333:108153-108172 | None:intergenic | 15.0% |
| !! | TTGTTATAACAAATAAAAAG+TGG | - | tig0021333:108519-108538 | None:intergenic | 15.0% |
| !!! | ATAATTTTTGGATAAAACTT+GGG | - | tig0021333:108616-108635 | None:intergenic | 15.0% |
| !!! | TATAATTTTTGGATAAAACT+TGG | - | tig0021333:108617-108636 | None:intergenic | 15.0% |
| !! | ACAATAACAAAGTAAAAAAA+AGG | - | tig0021333:108694-108713 | None:intergenic | 15.0% |
| !!! | TGTGTATTTTATTTTATATC+TGG | + | tig0021333:108869-108888 | Msa1390320:intron | 15.0% |
| !! | TTTGTCTTATATTATACTTT+AGG | + | tig0021333:108959-108978 | Msa1390320:intron | 15.0% |
| !! | ACTAACTAATTAATATGAAA+TGG | + | tig0021333:109401-109420 | Msa1390320:intron | 15.0% |
| !! | TCACATTGTATTAACAAAAA+GGG | - | tig0021333:105605-105624 | None:intergenic | 20.0% |
| !! | TTCACATTGTATTAACAAAA+AGG | - | tig0021333:105606-105625 | None:intergenic | 20.0% |
| !! | AAATTAGAATCGATTATAAC+TGG | + | tig0021333:105804-105823 | Msa1390320:intron | 20.0% |
| !! | AATTAGAATCGATTATAACT+GGG | + | tig0021333:105805-105824 | Msa1390320:intron | 20.0% |
| !!! | TTTTGTGTTTTTAATGCAAA+GGG | + | tig0021333:105898-105917 | Msa1390320:intron | 20.0% |
| !!! | AATTCAAACTTCTATGATTT+TGG | - | tig0021333:105954-105973 | None:intergenic | 20.0% |
| !!! | TTATTCTAAAAAGACGTTTA+TGG | - | tig0021333:106199-106218 | None:intergenic | 20.0% |
| !!! | ATTTTTTCGTATAGAAACTT+TGG | + | tig0021333:106723-106742 | Msa1390320:intron | 20.0% |
| !! | ATCTCAATAAATTACTTAAC+AGG | - | tig0021333:107549-107568 | None:intergenic | 20.0% |
| !! | ACATTGATATAATTGCAATT+TGG | + | tig0021333:107923-107942 | Msa1390320:intron | 20.0% |
| !!! | AACAAACTTTGAGAAAATTA+TGG | + | tig0021333:108534-108553 | Msa1390320:intron | 20.0% |
| !!! | GAAGTGTTTAGTAAAATTAT+CGG | + | tig0021333:109374-109393 | Msa1390320:intron | 20.0% |
| !! | TTATATGCTATATAAGCTAA+CGG | + | tig0021333:109589-109608 | Msa1390320:intron | 20.0% |
| !!! | AATAAGTTCATAGACTTTTA+AGG | - | tig0021333:110307-110326 | None:intergenic | 20.0% |
| ! | CACATTGTATTAACAAAAAG+GGG | - | tig0021333:105604-105623 | None:intergenic | 25.0% |
| ! | CAAACACAAATCAAAATGAT+TGG | - | tig0021333:105635-105654 | None:intergenic | 25.0% |
| !!! | CAATCATTTTGATTTGTGTT+TGG | + | tig0021333:105633-105652 | Msa1390320:intron | 25.0% |
| !!! | GTTGTTTTAATTTAGCTGAT+TGG | + | tig0021333:105769-105788 | Msa1390320:intron | 25.0% |
| ! | ATTATAACTGGGAAAATAAC+TGG | + | tig0021333:105816-105835 | Msa1390320:intron | 25.0% |
| ! | CATTCATGTTCTATGAATTT+AGG | - | tig0021333:105873-105892 | None:intergenic | 25.0% |
| !!! | CTTTTGTGTTTTTAATGCAA+AGG | + | tig0021333:105897-105916 | Msa1390320:intron | 25.0% |
| ! | AAGATAATCAATCCGAATTT+CGG | - | tig0021333:106149-106168 | None:intergenic | 25.0% |
| ! | GATTATCTTATCCAAATGAA+AGG | + | tig0021333:106160-106179 | Msa1390320:intron | 25.0% |
| ! | AAAAAGAATAGTTTCACAAC+CGG | - | tig0021333:106752-106771 | None:intergenic | 25.0% |
| !! | TTTCATATTTTCTTAGTCCT+TGG | + | tig0021333:106905-106924 | Msa1390320:intron | 25.0% |
| !!! | TATGATCCATTACTTTTACA+TGG | + | tig0021333:107143-107162 | Msa1390320:intron | 25.0% |
| ! | TTCAAACCATGTAAAAGTAA+TGG | - | tig0021333:107152-107171 | None:intergenic | 25.0% |
| ! | ATGTGAAAATATCAGCAAAA+TGG | - | tig0021333:107193-107212 | None:intergenic | 25.0% |
| ! | ACTTTCCTCATTTAATCTTT+CGG | - | tig0021333:107396-107415 | None:intergenic | 25.0% |
| !!! | GGTTGGTAAAAGAAAATAAA+CGG | - | tig0021333:107528-107547 | None:intergenic | 25.0% |
| ! | CAATAAATTACTTAACAGGT+TGG | - | tig0021333:107545-107564 | None:intergenic | 25.0% |
| ! | GTAATTTATTGAGATGCTTT+AGG | + | tig0021333:107554-107573 | Msa1390320:intron | 25.0% |
| ! | TATTTGACACAATTCAACAA+GGG | - | tig0021333:107609-107628 | None:intergenic | 25.0% |
| ! | ATATTTGACACAATTCAACA+AGG | - | tig0021333:107610-107629 | None:intergenic | 25.0% |
| ! | TCAAATATATCTATCTATGC+AGG | + | tig0021333:107622-107641 | Msa1390320:intron | 25.0% |
| ! | TCTTTATCTTGTAATATAGG+TGG | - | tig0021333:107670-107689 | None:intergenic | 25.0% |
| ! | GCATCTTTATCTTGTAATAT+AGG | - | tig0021333:107673-107692 | None:intergenic | 25.0% |
| !! | TAAAAAAAAAAGGTTCTAGC+AGG | - | tig0021333:108143-108162 | None:intergenic | 25.0% |
| !! | CTGCAAGTTGAAAAAAATTA+TGG | + | tig0021333:108439-108458 | Msa1390320:intron | 25.0% |
| ! | TTGAGAAAATTATGGATTTG+AGG | + | tig0021333:108542-108561 | Msa1390320:intron | 25.0% |
| ! | TCTGATCTGTGAAAAAAATT+AGG | - | tig0021333:108669-108688 | None:intergenic | 25.0% |
| !!! | CTAATGACATCTATTTTTTC+AGG | + | tig0021333:108768-108787 | Msa1390320:intron | 25.0% |
| !! | CTTTCATTTTAAGCTCTATT+TGG | - | tig0021333:109625-109644 | None:intergenic | 25.0% |
| !! | TCCATGTTATTCTTTCTTTT+AGG | + | tig0021333:109692-109711 | Msa1390320:intron | 25.0% |
| ! | ACCTAAAAGAAAGAATAACA+TGG | - | tig0021333:109696-109715 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTTAGGTAAAGA+TGG | + | tig0021333:109701-109720 | Msa1390320:intron | 25.0% |
| ! | CATTGCAAATCAATTTAATG+AGG | + | tig0021333:110213-110232 | Msa1390320:three_prime_UTR | 25.0% |
| !!! | TAGACTTTTAAGGTATAAGA+GGG | - | tig0021333:110297-110316 | None:intergenic | 25.0% |
| !!! | ATAGACTTTTAAGGTATAAG+AGG | - | tig0021333:110298-110317 | None:intergenic | 25.0% |
| ! | AAAGATCTTAAAGATACTAC+TGG | + | tig0021333:110387-110406 | Msa1390320:three_prime_UTR | 25.0% |
| !! | TACTAGTTTGAAAAATTTCC+AGG | + | tig0021333:110430-110449 | Msa1390320:three_prime_UTR | 25.0% |
| !! | CTATGATTTTGGAAGTGAAA+GGG | - | tig0021333:105943-105962 | None:intergenic | 30.0% |
| !! | TCTATGATTTTGGAAGTGAA+AGG | - | tig0021333:105944-105963 | None:intergenic | 30.0% |
| ! | TTCTTCTTTTAGTATTTCCC+TGG | + | tig0021333:105999-106018 | Msa1390320:intron | 30.0% |
| GGCTTACAAATTCCTATTAA+CGG | - | tig0021333:106067-106086 | None:intergenic | 30.0% | |
| TTATCCAAATGAAAGGTCTT+TGG | + | tig0021333:106167-106186 | Msa1390320:intron | 30.0% | |
| GATAAGATTTCCAGAGAAAA+TGG | - | tig0021333:106422-106441 | None:intergenic | 30.0% | |
| CAAAGAAAAACGACATAAGA+AGG | + | tig0021333:106510-106529 | Msa1390320:intron | 30.0% | |
| !! | TTTCAAAGTACCGTATGTAT+TGG | + | tig0021333:106640-106659 | Msa1390320:intron | 30.0% |
| AAGACCCAATATTTAGATCT+GGG | - | tig0021333:106672-106691 | None:intergenic | 30.0% | |
| TAAGACCCAATATTTAGATC+TGG | - | tig0021333:106673-106692 | None:intergenic | 30.0% | |
| AAAAGAATAGTTTCACAACC+GGG | - | tig0021333:106751-106770 | None:intergenic | 30.0% | |
| AATAGCCATAGTTATCAATG+CGG | - | tig0021333:107024-107043 | None:intergenic | 30.0% | |
| ATTGCACAAAATGAAGTGTA+GGG | - | tig0021333:107102-107121 | None:intergenic | 30.0% | |
| AATTGCACAAAATGAAGTGT+AGG | - | tig0021333:107103-107122 | None:intergenic | 30.0% | |
| AATATCAGCAAAATGGAAGA+TGG | - | tig0021333:107186-107205 | None:intergenic | 30.0% | |
| TGTTTCTTACTCATTGCAAT+AGG | + | tig0021333:107239-107258 | Msa1390320:intron | 30.0% | |
| GTTTCTTACTCATTGCAATA+GGG | + | tig0021333:107240-107259 | Msa1390320:intron | 30.0% | |
| TGATTCAAACCTTCAGAAAT+GGG | - | tig0021333:107348-107367 | None:intergenic | 30.0% | |
| TTGATTCAAACCTTCAGAAA+TGG | - | tig0021333:107349-107368 | None:intergenic | 30.0% | |
| GAAAACCGAAAGATTAAATG+AGG | + | tig0021333:107388-107407 | Msa1390320:intron | 30.0% | |
| ATTACAAGATAAAGATGCCA+AGG | + | tig0021333:107675-107694 | Msa1390320:CDS | 30.0% | |
| AAAAAACCATTGTTGCCATT+AGG | + | tig0021333:107734-107753 | Msa1390320:CDS | 30.0% | |
| AACAAACTTCTAAATCACTC+TGG | - | tig0021333:107967-107986 | None:intergenic | 30.0% | |
| CTTAAAAAATTGCAGCCAAT+CGG | + | tig0021333:108039-108058 | Msa1390320:intron | 30.0% | |
| TATAAGATATTGACACCGAT+TGG | - | tig0021333:108057-108076 | None:intergenic | 30.0% | |
| ! | TTATGTGCAAACTGTTGATT+TGG | + | tig0021333:108092-108111 | Msa1390320:intron | 30.0% |
| TACAAAATGCAGTCAAATAG+CGG | + | tig0021333:108267-108286 | Msa1390320:intron | 30.0% | |
| TGAACATTCTAACTTCAAGA+GGG | - | tig0021333:108383-108402 | None:intergenic | 30.0% | |
| ATGAACATTCTAACTTCAAG+AGG | - | tig0021333:108384-108403 | None:intergenic | 30.0% | |
| !! | TTCCTTAGGTACTTTTTGTA+TGG | + | tig0021333:108479-108498 | Msa1390320:intron | 30.0% |
| !! | AACCATACAAAAAGTACCTA+AGG | - | tig0021333:108484-108503 | None:intergenic | 30.0% |
| TTATGGATTTGAGGAAATCA+TGG | + | tig0021333:108551-108570 | Msa1390320:intron | 30.0% | |
| ATTAGACATTGAACTAACCA+AGG | - | tig0021333:108753-108772 | None:intergenic | 30.0% | |
| ! | CTTTAGGTTTCACAATTAAG+AGG | + | tig0021333:108975-108994 | Msa1390320:intron | 30.0% |
| CAATGTAAATACATGAAGCA+GGG | - | tig0021333:109116-109135 | None:intergenic | 30.0% | |
| ! | AAAAACTGTGGCAAACATTT+TGG | + | tig0021333:109143-109162 | Msa1390320:intron | 30.0% |
| TCTTTCTAAACAAGTTCCTT+AGG | + | tig0021333:109167-109186 | Msa1390320:intron | 30.0% | |
| CTCTGTTAGGTAAAATATAG+CGG | + | tig0021333:109278-109297 | Msa1390320:intron | 30.0% | |
| ! | TAAGCTACTTGATAGCTTAT+AGG | + | tig0021333:109309-109328 | Msa1390320:intron | 30.0% |
| ! | AAGCTACTTGATAGCTTATA+GGG | + | tig0021333:109310-109329 | Msa1390320:intron | 30.0% |
| ! | ATTTTAAGCTCTATTTGGCA+AGG | - | tig0021333:109620-109639 | None:intergenic | 30.0% |
| ACAAATATCTGACATGTTTC+TGG | + | tig0021333:109663-109682 | Msa1390320:intron | 30.0% | |
| ATGATATGAGAGTCAACAAT+GGG | + | tig0021333:109913-109932 | Msa1390320:CDS | 30.0% | |
| ACTTATTCCCTCAAAATGTT+TGG | + | tig0021333:110320-110339 | Msa1390320:three_prime_UTR | 30.0% | |
| ! | AGGCGAAGAATTTTATTGAA+AGG | + | tig0021333:110356-110375 | Msa1390320:three_prime_UTR | 30.0% |
| ! | GGCGAAGAATTTTATTGAAA+GGG | + | tig0021333:110357-110376 | Msa1390320:three_prime_UTR | 30.0% |
| ! | GAATTTTATTGAAAGGGAGA+TGG | + | tig0021333:110363-110382 | Msa1390320:three_prime_UTR | 30.0% |
| AAGCAAAAATACCCTAGTCA+TGG | - | tig0021333:105578-105597 | None:intergenic | 35.0% | |
| GATTTGTGTTTGGATCTGTT+TGG | + | tig0021333:105643-105662 | Msa1390320:intron | 35.0% | |
| ! | ATCTGTTTGGTTCATGTGTT+TGG | + | tig0021333:105656-105675 | Msa1390320:intron | 35.0% |
| ! | TGGTTCATGTGTTTGGTAAT+TGG | + | tig0021333:105663-105682 | Msa1390320:intron | 35.0% |
| ! | GGTTCATGTGTTTGGTAATT+GGG | + | tig0021333:105664-105683 | Msa1390320:intron | 35.0% |
| ! | TATGGGTTCTGATATTCTTC+TGG | + | tig0021333:105723-105742 | Msa1390320:intron | 35.0% |
| AGGGTAACCTTATAGTGAAT+TGG | + | tig0021333:105917-105936 | Msa1390320:intron | 35.0% | |
| !!! | CCTTTGCTTTTTCTACTGAT+AGG | - | tig0021333:106027-106046 | None:intergenic | 35.0% |
| CCTATCAGTAGAAAAAGCAA+AGG | + | tig0021333:106024-106043 | Msa1390320:intron | 35.0% | |
| ATCAGTAGAAAAAGCAAAGG+AGG | + | tig0021333:106027-106046 | Msa1390320:intron | 35.0% | |
| AAAAAGCAAAGGAGGATTGA+TGG | + | tig0021333:106035-106054 | Msa1390320:intron | 35.0% | |
| CGCTTTCAAATCCACAAAAT+CGG | - | tig0021333:106359-106378 | None:intergenic | 35.0% | |
| ! | CGATTTTGTGGATTTGAAAG+CGG | + | tig0021333:106357-106376 | Msa1390320:intron | 35.0% |
| AAAAACGACATAAGAAGGAG+AGG | + | tig0021333:106515-106534 | Msa1390320:intron | 35.0% | |
| ACATAAGAAGGAGAGGTAAT+GGG | + | tig0021333:106522-106541 | Msa1390320:intron | 35.0% | |
| ! | GCTTTGACTTATGAGAAACT+AGG | + | tig0021333:106596-106615 | Msa1390320:intron | 35.0% |
| ! | TACATACGGTACTTTGAAAG+AGG | - | tig0021333:106639-106658 | None:intergenic | 35.0% |
| TAGGCCCAGATCTAAATATT+GGG | + | tig0021333:106665-106684 | Msa1390320:intron | 35.0% | |
| TAGTTATCAATGCGGAAATG+CGG | - | tig0021333:107016-107035 | None:intergenic | 35.0% | |
| ! | CATTTCCGCATTGATAACTA+TGG | + | tig0021333:107016-107035 | Msa1390320:intron | 35.0% |
| GATGACCAAAAGTAAAAGCA+AGG | - | tig0021333:107061-107080 | None:intergenic | 35.0% | |
| TCCTCTAATGCTACTAAAGT+TGG | + | tig0021333:107315-107334 | Msa1390320:CDS | 35.0% | |
| TCCAACTTTAGTAGCATTAG+AGG | - | tig0021333:107319-107338 | None:intergenic | 35.0% | |
| ! | AGGAAAGTTGATCAGATCTA+TGG | + | tig0021333:107408-107427 | Msa1390320:intron | 35.0% |
| TCCACCTCTAAATTACTCAT+GGG | - | tig0021333:107462-107481 | None:intergenic | 35.0% | |
| ATCCACCTCTAAATTACTCA+TGG | - | tig0021333:107463-107482 | None:intergenic | 35.0% | |
| !!! | ACAATGGTTTTTTTCTGCAC+AGG | - | tig0021333:107727-107746 | None:intergenic | 35.0% |
| GACATATATGATTGACAGCA+CGG | + | tig0021333:107813-107832 | Msa1390320:CDS | 35.0% | |
| ! | TTACTCGTTTTACGTCAGTA+GGG | - | tig0021333:107840-107859 | None:intergenic | 35.0% |
| TTGTTAGATAGCAGCTATAG+TGG | + | tig0021333:108180-108199 | Msa1390320:intron | 35.0% | |
| ! | GTTTGAAATGTTCTGAATCG+CGG | - | tig0021333:108344-108363 | None:intergenic | 35.0% |
| AAACTTAGACACGTTTCCTT+AGG | + | tig0021333:108465-108484 | Msa1390320:intron | 35.0% | |
| ! | TTTAACTGAGTTGGAAACAC+AGG | + | tig0021333:108844-108863 | Msa1390320:CDS | 35.0% |
| CAACAGAAACATTGAAGAGA+GGG | - | tig0021333:108906-108925 | None:intergenic | 35.0% | |
| AAGAGGTGAAAATTCTACCT+TGG | + | tig0021333:108992-109011 | Msa1390320:CDS | 35.0% | |
| TGTTGAAACGTTAAGAGCAA+AGG | + | tig0021333:109085-109104 | Msa1390320:CDS | 35.0% | |
| GCAATGTAAATACATGAAGC+AGG | - | tig0021333:109117-109136 | None:intergenic | 35.0% | |
| CTTCATGTATTTACATTGCC+TGG | + | tig0021333:109118-109137 | Msa1390320:intron | 35.0% | |
| ! | TTTCTCTTTTCTGTGAGTCT+TGG | - | tig0021333:109247-109266 | None:intergenic | 35.0% |
| AACTAAATCAACGCTCTGTT+AGG | + | tig0021333:109265-109284 | Msa1390320:intron | 35.0% | |
| ! | GGGTATAAGCTAGTTGATAT+AGG | + | tig0021333:109330-109349 | Msa1390320:intron | 35.0% |
| TTCGTATCGTCAAAATTGAG+CGG | - | tig0021333:109568-109587 | None:intergenic | 35.0% | |
| !! | TATCTGACATGTTTCTGGTT+TGG | + | tig0021333:109668-109687 | Msa1390320:intron | 35.0% |
| ! | ATGAAACAATGGGTTCAATC+CGG | - | tig0021333:109751-109770 | None:intergenic | 35.0% |
| !! | GGTTGATAGAAATGATGATG+TGG | - | tig0021333:109867-109886 | None:intergenic | 35.0% |
| GGCATAGGATTAATAGATGT+GGG | - | tig0021333:109888-109907 | None:intergenic | 35.0% | |
| TGGCATAGGATTAATAGATG+TGG | - | tig0021333:109889-109908 | None:intergenic | 35.0% | |
| TTGACTCTCATATCATGACA+TGG | - | tig0021333:109909-109928 | None:intergenic | 35.0% | |
| CATGATATGAGAGTCAACAA+TGG | + | tig0021333:109912-109931 | Msa1390320:CDS | 35.0% | |
| CAGTAAATTGCCATATCTTG+TGG | + | tig0021333:110110-110129 | Msa1390320:exon | 35.0% | |
| ACTAAAGCAACCACAAGATA+TGG | - | tig0021333:110123-110142 | None:intergenic | 35.0% | |
| GTCAAGAAGTTATTCTTGTC+TGG | + | tig0021333:110141-110160 | Msa1390320:three_prime_UTR | 35.0% | |
| ! | GCATGAACCAAACATTTTGA+GGG | - | tig0021333:110330-110349 | None:intergenic | 35.0% |
| ! | AAAATGTTTGGTTCATGCGA+GGG | + | tig0021333:110332-110351 | Msa1390320:three_prime_UTR | 35.0% |
| AATCAAACAAACTCGTTTCC+TGG | - | tig0021333:110451-110470 | None:intergenic | 35.0% | |
| CCGATATTCTTCGGAATCAA+CGG | - | tig0021333:105512-105531 | None:intergenic | 40.0% | |
| !! | CCGTTGATTCCGAAGAATAT+CGG | + | tig0021333:105509-105528 | Msa1390320:CDS | 40.0% |
| !! | CGTTGATTCCGAAGAATATC+GGG | + | tig0021333:105510-105529 | Msa1390320:CDS | 40.0% |
| TCTGAAGAGTAAGCTGAATC+AGG | + | tig0021333:105537-105556 | Msa1390320:CDS | 40.0% | |
| GAAAGGGCCAATTCACTATA+AGG | - | tig0021333:105927-105946 | None:intergenic | 40.0% | |
| ! | TTTTCTACTGATAGGAGCCA+GGG | - | tig0021333:106019-106038 | None:intergenic | 40.0% |
| ! | TTTTTCTACTGATAGGAGCC+AGG | - | tig0021333:106020-106039 | None:intergenic | 40.0% |
| TGATGGCATGAACCGTTAAT+AGG | + | tig0021333:106052-106071 | Msa1390320:intron | 40.0% | |
| CTAATAGCTGTGCCGAAATT+CGG | + | tig0021333:106134-106153 | Msa1390320:intron | 40.0% | |
| TCCAAATGAAAGGTCTTTGG+TGG | + | tig0021333:106170-106189 | Msa1390320:intron | 40.0% | |
| TTTGTGGATTTGAAAGCGGA+TGG | + | tig0021333:106361-106380 | Msa1390320:intron | 40.0% | |
| TCCAGAGAAAATGGTTGAAG+TGG | - | tig0021333:106413-106432 | None:intergenic | 40.0% | |
| GACATAAGAAGGAGAGGTAA+TGG | + | tig0021333:106521-106540 | Msa1390320:intron | 40.0% | |
| CATAAGAAGGAGAGGTAATG+GGG | + | tig0021333:106523-106542 | Msa1390320:intron | 40.0% | |
| ! | ATAAGAAGGAGAGGTAATGG+GGG | + | tig0021333:106524-106543 | Msa1390320:intron | 40.0% |
| GAAGAAGAAGAACTGCAGTA+AGG | + | tig0021333:106568-106587 | Msa1390320:intron | 40.0% | |
| CAATATTTAGATCTGGGCCT+AGG | - | tig0021333:106666-106685 | None:intergenic | 40.0% | |
| CTAGGCCCAGATCTAAATAT+TGG | + | tig0021333:106664-106683 | Msa1390320:intron | 40.0% | |
| !! | CGTATAGAAACTTTGGAACC+CGG | + | tig0021333:106730-106749 | Msa1390320:intron | 40.0% |
| !! | GTCCTCCTTGCTTTTACTTT+TGG | + | tig0021333:107053-107072 | Msa1390320:intron | 40.0% |
| GACCAAAAGTAAAAGCAAGG+AGG | - | tig0021333:107058-107077 | None:intergenic | 40.0% | |
| TTAGTAGCATTAGAGGACTG+TGG | - | tig0021333:107312-107331 | None:intergenic | 40.0% | |
| CCACCTCTAAATTACTCATG+GGG | - | tig0021333:107461-107480 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTTTTCTGCACAGG+CGG | - | tig0021333:107724-107743 | None:intergenic | 40.0% |
| ! | CTTGATGATCCACTTGTTGA+TGG | - | tig0021333:107760-107779 | None:intergenic | 40.0% |
| ! | CTTACTCGTTTTACGTCAGT+AGG | - | tig0021333:107841-107860 | None:intergenic | 40.0% |
| CTACTGACGTAAAACGAGTA+AGG | + | tig0021333:107839-107858 | Msa1390320:CDS | 40.0% | |
| ! | TGTCACTTGGTTCATTAAGC+AGG | - | tig0021333:108013-108032 | None:intergenic | 40.0% |
| TGCTTAATGAACCAAGTGAC+AGG | + | tig0021333:108012-108031 | Msa1390320:intron | 40.0% | |
| ! | TTTTAAGCATGCCTGTCACT+TGG | - | tig0021333:108026-108045 | None:intergenic | 40.0% |
| !! | TATAGTGGTGCTATACTGCT+GGG | + | tig0021333:108195-108214 | Msa1390320:intron | 40.0% |
| TAAAATCCCGCTGCACAAAA+GGG | - | tig0021333:108299-108318 | None:intergenic | 40.0% | |
| TTAAAATCCCGCTGCACAAA+AGG | - | tig0021333:108300-108319 | None:intergenic | 40.0% | |
| ! | TTCCTTAGGTGCTTTTCGTA+CGG | - | tig0021333:108588-108607 | None:intergenic | 40.0% |
| AAACTTGGGTGCATTTCCTT+AGG | - | tig0021333:108602-108621 | None:intergenic | 40.0% | |
| ! | ACACTCATTTGTTCGACTTG+AGG | + | tig0021333:108717-108736 | Msa1390320:intron | 40.0% |
| CCAACAGAAACATTGAAGAG+AGG | - | tig0021333:108907-108926 | None:intergenic | 40.0% | |
| ! | CCTCTCTTCAATGTTTCTGT+TGG | + | tig0021333:108904-108923 | Msa1390320:intron | 40.0% |
| ATCAGTAAGACGCTTTACCA+AGG | - | tig0021333:109012-109031 | None:intergenic | 40.0% | |
| !! | CCAAAAGTACACTGATTCTG+CGG | + | tig0021333:109037-109056 | Msa1390320:CDS | 40.0% |
| CATTGCCTGGTTAAAAACTG+TGG | + | tig0021333:109131-109150 | Msa1390320:intron | 40.0% | |
| ! | GTTTGCCACAGTTTTTAACC+AGG | - | tig0021333:109139-109158 | None:intergenic | 40.0% |
| CTAAACAAGTTCCTTAGGTC+TGG | + | tig0021333:109172-109191 | Msa1390320:intron | 40.0% | |
| ! | CTTTTTGTAAGCCAGACCTA+AGG | - | tig0021333:109186-109205 | None:intergenic | 40.0% |
| ATCGTCAAAATTGAGCGGTT+TGG | - | tig0021333:109563-109582 | None:intergenic | 40.0% | |
| GAGACTGTGAAAAGAGTTAC+CGG | + | tig0021333:109729-109748 | Msa1390320:CDS | 40.0% | |
| CAGGCATGACATGAAACAAT+GGG | - | tig0021333:109761-109780 | None:intergenic | 40.0% | |
| TCAGGCATGACATGAAACAA+TGG | - | tig0021333:109762-109781 | None:intergenic | 40.0% | |
| ATGCCTGACATGTCATCAAT+GGG | + | tig0021333:109774-109793 | Msa1390320:CDS | 40.0% | |
| CTCATATCATGACATGGCAT+AGG | - | tig0021333:109903-109922 | None:intergenic | 40.0% | |
| TATGAGAGTCAACAATGGGT+TGG | + | tig0021333:109917-109936 | Msa1390320:CDS | 40.0% | |
| ! | ATGAGAGTCAACAATGGGTT+GGG | + | tig0021333:109918-109937 | Msa1390320:CDS | 40.0% |
| ATTTACTGCTCTCCATTAGG+AGG | - | tig0021333:110098-110117 | None:intergenic | 40.0% | |
| GCAATTTACTGCTCTCCATT+AGG | - | tig0021333:110101-110120 | None:intergenic | 40.0% | |
| ATTCCCCAAACGAAGATATG+GGG | - | tig0021333:110266-110285 | None:intergenic | 40.0% | |
| CATTCCCCAAACGAAGATAT+GGG | - | tig0021333:110267-110286 | None:intergenic | 40.0% | |
| ! | CGCATGAACCAAACATTTTG+AGG | - | tig0021333:110331-110350 | None:intergenic | 40.0% |
| ! | CAAAATGTTTGGTTCATGCG+AGG | + | tig0021333:110331-110350 | Msa1390320:three_prime_UTR | 40.0% |
| ACAGAGGAAGAAGAAGGAGA+AGG | - | tig0021333:105415-105434 | None:intergenic | 45.0% | |
| TCAGCAACAGAGGAAGAAGA+AGG | - | tig0021333:105421-105440 | None:intergenic | 45.0% | |
| CAGAACAGCCCGATATTCTT+CGG | - | tig0021333:105521-105540 | None:intergenic | 45.0% | |
| GCCACCAAAGACCTTTCATT+TGG | - | tig0021333:106174-106193 | None:intergenic | 45.0% | |
| ! | GCCACTTCAACCATTTTCTC+TGG | + | tig0021333:106409-106428 | Msa1390320:intron | 45.0% |
| GAAGAAGAACTGCAGTAAGG+TGG | + | tig0021333:106571-106590 | Msa1390320:intron | 45.0% | |
| ! | ACGGTACTTTGAAAGAGGCT+AGG | - | tig0021333:106634-106653 | None:intergenic | 45.0% |
| ! | AGTACCGTATGTATTGGCCT+AGG | + | tig0021333:106646-106665 | Msa1390320:intron | 45.0% |
| !! | CGGACACTATTTTAGAGACG+CGG | - | tig0021333:106960-106979 | None:intergenic | 45.0% |
| AACCAAAAATTGGTGCGGAG+CGG | - | tig0021333:106980-106999 | None:intergenic | 45.0% | |
| !!! | CTCCGCACCAATTTTTGGTT+TGG | + | tig0021333:106980-106999 | Msa1390320:intron | 45.0% |
| GGCCAAACCAAAAATTGGTG+CGG | - | tig0021333:106985-107004 | None:intergenic | 45.0% | |
| AATGAAGTGTAGGGTGGAGA+TGG | - | tig0021333:107093-107112 | None:intergenic | 45.0% | |
| GCACAAAATGAAGTGTAGGG+TGG | - | tig0021333:107099-107118 | None:intergenic | 45.0% | |
| CATTCTCAGGAAAAGTGGCT+AGG | - | tig0021333:107287-107306 | None:intergenic | 45.0% | |
| !!! | CTAGCCACTTTTCCTGAGAA+TGG | + | tig0021333:107285-107304 | Msa1390320:CDS | 45.0% |
| TGGTCCATTCTCAGGAAAAG+TGG | - | tig0021333:107292-107311 | None:intergenic | 45.0% | |
| TGGCCCCATGAGTAATTTAG+AGG | + | tig0021333:107455-107474 | Msa1390320:intron | 45.0% | |
| CCCCATGAGTAATTTAGAGG+TGG | + | tig0021333:107458-107477 | Msa1390320:intron | 45.0% | |
| TATGCAGGATCTGTTCCTTC+TGG | + | tig0021333:107637-107656 | Msa1390320:intron | 45.0% | |
| !!! | TTTTTTCTGCACAGGCGGTA+TGG | - | tig0021333:107719-107738 | None:intergenic | 45.0% |
| TGATGGCCTAATGGCAACAA+TGG | - | tig0021333:107743-107762 | None:intergenic | 45.0% | |
| !! | TCCACTTGTTGATGGCCTAA+TGG | - | tig0021333:107752-107771 | None:intergenic | 45.0% |
| ! | TCTGATGATGACGAAGCTGA+GGG | + | tig0021333:107787-107806 | Msa1390320:CDS | 45.0% |
| CTGACGTAAAACGAGTAAGG+AGG | + | tig0021333:107842-107861 | Msa1390320:CDS | 45.0% | |
| !! | GTGCAAACTGTTGATTTGGC+TGG | + | tig0021333:108096-108115 | Msa1390320:intron | 45.0% |
| !! | CTATAGTGGTGCTATACTGC+TGG | + | tig0021333:108194-108213 | Msa1390320:intron | 45.0% |
| ! | GATATAGCCCTTTTGTGCAG+CGG | + | tig0021333:108289-108308 | Msa1390320:intron | 45.0% |
| ! | ATATAGCCCTTTTGTGCAGC+GGG | + | tig0021333:108290-108309 | Msa1390320:intron | 45.0% |
| ! | ATGTTCTGAATCGCGGATAG+CGG | - | tig0021333:108337-108356 | None:intergenic | 45.0% |
| !! | AACCGTACGAAAAGCACCTA+AGG | + | tig0021333:108583-108602 | Msa1390320:intron | 45.0% |
| CTTGAGGACTCTTTCTACCT+TGG | + | tig0021333:108733-108752 | Msa1390320:intron | 45.0% | |
| TTTCCAATAGAGAGTCAGCC+AGG | + | tig0021333:108795-108814 | Msa1390320:CDS | 45.0% | |
| GCAGGCTCATTTAACTGAGT+TGG | + | tig0021333:108835-108854 | Msa1390320:CDS | 45.0% | |
| ! | CCGCAGAATCAGTGTACTTT+TGG | - | tig0021333:109040-109059 | None:intergenic | 45.0% |
| CATGCCTGACATGTCATCAA+TGG | + | tig0021333:109773-109792 | Msa1390320:CDS | 45.0% | |
| TGCCTGACATGTCATCAATG+GGG | + | tig0021333:109775-109794 | Msa1390320:CDS | 45.0% | |
| ! | ATCCCCATTGATGACATGTC+AGG | - | tig0021333:109780-109799 | None:intergenic | 45.0% |
| CATCTGCTGAATTGTCTGAG+GGG | - | tig0021333:109821-109840 | None:intergenic | 45.0% | |
| GCATCTGCTGAATTGTCTGA+GGG | - | tig0021333:109822-109841 | None:intergenic | 45.0% | |
| TGCATCTGCTGAATTGTCTG+AGG | - | tig0021333:109823-109842 | None:intergenic | 45.0% | |
| CCTACAACTGCTGCATTGTT+TGG | - | tig0021333:109972-109991 | None:intergenic | 45.0% | |
| CCAAACAATGCAGCAGTTGT+AGG | + | tig0021333:109969-109988 | Msa1390320:CDS | 45.0% | |
| AACAATGCAGCAGTTGTAGG+TGG | + | tig0021333:109972-109991 | Msa1390320:CDS | 45.0% | |
| ACAATGCAGCAGTTGTAGGT+GGG | + | tig0021333:109973-109992 | Msa1390320:CDS | 45.0% | |
| AGTTGTAGGTGGGAACAAGA+TGG | + | tig0021333:109983-110002 | Msa1390320:CDS | 45.0% | |
| GTTGTAGGTGGGAACAAGAT+GGG | + | tig0021333:109984-110003 | Msa1390320:CDS | 45.0% | |
| GCTTGGAACATCTTCAGAAG+CGG | + | tig0021333:110039-110058 | Msa1390320:CDS | 45.0% | |
| TGCACCCCATATCTTCGTTT+GGG | + | tig0021333:110259-110278 | Msa1390320:three_prime_UTR | 45.0% | |
| GCATTCCCCAAACGAAGATA+TGG | - | tig0021333:110268-110287 | None:intergenic | 45.0% | |
| ACGAAATCCCCGACAACCTA+TGG | + | tig0021333:105284-105303 | Msa1390320:CDS | 50.0% | |
| CATGAATCTGCGGTGACCAT+AGG | - | tig0021333:105303-105322 | None:intergenic | 50.0% | |
| TCACCGCAGATTCATGTCAC+CGG | + | tig0021333:105307-105326 | Msa1390320:CDS | 50.0% | |
| CATCTTGGAGGATTCATCGC+CGG | - | tig0021333:105338-105357 | None:intergenic | 50.0% | |
| !! | AAAGCGTTGGAACGCCCATT+CGG | - | tig0021333:105374-105393 | None:intergenic | 50.0% |
| ! | CAGCTTCTTGCAGAAAGCGT+TGG | - | tig0021333:105387-105406 | None:intergenic | 50.0% |
| GGAAGAAGAAGGAGAAGGTG+TGG | - | tig0021333:105410-105429 | None:intergenic | 50.0% | |
| TCCTCTGTTGCTGACAACAC+CGG | + | tig0021333:105427-105446 | Msa1390320:CDS | 50.0% | |
| !! | ACCGTCTTTTGGTGCAGCAT+CGG | - | tig0021333:105458-105477 | None:intergenic | 50.0% |
| AGGTGGTCCATTGGGCAAAA+CGG | - | tig0021333:105482-105501 | None:intergenic | 50.0% | |
| GGATTTGAAAGCGGATGGAG+CGG | + | tig0021333:106366-106385 | Msa1390320:intron | 50.0% | |
| GATTTGAAAGCGGATGGAGC+GGG | + | tig0021333:106367-106386 | Msa1390320:intron | 50.0% | |
| GAAGAACTGCAGTAAGGTGG+TGG | + | tig0021333:106574-106593 | Msa1390320:intron | 50.0% | |
| TGGGCCTAGGCCAATACATA+CGG | - | tig0021333:106653-106672 | None:intergenic | 50.0% | |
| GGCACGGCCAAACCAAAAAT+TGG | - | tig0021333:106990-107009 | None:intergenic | 50.0% | |
| GGATCTCAGCCCATTTCTGA+AGG | + | tig0021333:107336-107355 | Msa1390320:CDS | 50.0% | |
| ATAGGTGGATCGCTTCCAGA+AGG | - | tig0021333:107655-107674 | None:intergenic | 50.0% | |
| GCCATTAGGCCATCAACAAG+TGG | + | tig0021333:107748-107767 | Msa1390320:CDS | 50.0% | |
| ! | GTCTGATGATGACGAAGCTG+AGG | + | tig0021333:107786-107805 | Msa1390320:CDS | 50.0% |
| TGGTTCATTAAGCAGGAGCG+AGG | - | tig0021333:108006-108025 | None:intergenic | 50.0% | |
| TGCTATACTGCTGGGTGTAG+CGG | + | tig0021333:108203-108222 | Msa1390320:intron | 50.0% | |
| ! | TGTTCTGAATCGCGGATAGC+GGG | - | tig0021333:108336-108355 | None:intergenic | 50.0% |
| CTTTCTTCTTCTTGAGCGCC+TGG | - | tig0021333:108816-108835 | None:intergenic | 50.0% | |
| GCGCTCAAGAAGAAGAAAGC+AGG | + | tig0021333:108817-108836 | Msa1390320:CDS | 50.0% | |
| ATGGGGATGCCAGCATTTGA+TGG | + | tig0021333:109792-109811 | Msa1390320:CDS | 50.0% | |
| TGATGTGGATCGTCTTGCAC+AGG | - | tig0021333:109852-109871 | None:intergenic | 50.0% | |
| ! | CATCTTCAGAAGCGGATTCG+TGG | + | tig0021333:110047-110066 | Msa1390320:CDS | 50.0% |
| TCTTGTGGACCTCCTCCTAA+TGG | + | tig0021333:110083-110102 | Msa1390320:CDS | 50.0% | |
| TACTGCTCTCCATTAGGAGG+AGG | - | tig0021333:110095-110114 | None:intergenic | 50.0% | |
| GTGCACCCCATATCTTCGTT+TGG | + | tig0021333:110258-110277 | Msa1390320:three_prime_UTR | 50.0% | |
| GCACCCCATATCTTCGTTTG+GGG | + | tig0021333:110260-110279 | Msa1390320:three_prime_UTR | 50.0% | |
| ! | TGTTTGGTTCATGCGAGGGA+AGG | + | tig0021333:110336-110355 | Msa1390320:three_prime_UTR | 50.0% |
| TGCGGTGACCATAGGTTGTC+GGG | - | tig0021333:105295-105314 | None:intergenic | 55.0% | |
| CTGCGGTGACCATAGGTTGT+CGG | - | tig0021333:105296-105315 | None:intergenic | 55.0% | |
| !! | ACCGGTGTTGTCAGCAACAG+AGG | - | tig0021333:105431-105450 | None:intergenic | 55.0% |
| !! | TGGTGCAGCATCGGCAAAAC+CGG | - | tig0021333:105449-105468 | None:intergenic | 55.0% |
| GCCGATGCTGCACCAAAAGA+CGG | + | tig0021333:105454-105473 | Msa1390320:intron | 55.0% | |
| ! | GGCAAAACGGCACCGTCTTT+TGG | - | tig0021333:105469-105488 | None:intergenic | 55.0% |
| TTTGCCCAATGGACCACCTC+CGG | + | tig0021333:105483-105502 | Msa1390320:CDS | 55.0% | |
| TCTTCGGAATCAACGGCCAC+CGG | - | tig0021333:105505-105524 | None:intergenic | 55.0% | |
| GCCTGTAGCAGCTGCTATTG+CGG | + | tig0021333:106258-106277 | Msa1390320:intron | 55.0% | |
| ACCGCAATAGCAGCTGCTAC+AGG | - | tig0021333:106262-106281 | None:intergenic | 55.0% | |
| TAGCAGCTGCTATTGCGGTG+CGG | + | tig0021333:106263-106282 | Msa1390320:intron | 55.0% | |
| AATGGTTGAAGTGGCCGCTC+CGG | - | tig0021333:106404-106423 | None:intergenic | 55.0% | |
| !! | AGGAGAGGTAATGGGGGAGA+AGG | + | tig0021333:106530-106549 | Msa1390320:intron | 55.0% |
| ! | GTCCGCTCCGCACCAATTTT+TGG | + | tig0021333:106975-106994 | Msa1390320:intron | 55.0% |
| ATCAATGCGGAAATGCGGCG+AGG | - | tig0021333:107011-107030 | None:intergenic | 55.0% | |
| GAGGACTGTGGTCCATTCTC+AGG | - | tig0021333:107300-107319 | None:intergenic | 55.0% | |
| TCTGCACAGGCGGTATGGAA+GGG | - | tig0021333:107714-107733 | None:intergenic | 55.0% | |
| TTCTGCACAGGCGGTATGGA+AGG | - | tig0021333:107715-107734 | None:intergenic | 55.0% | |
| GAGGGGCTTCCATCAAATGC+TGG | - | tig0021333:109804-109823 | None:intergenic | 55.0% | |
| AAACAGCTCCTCCGTTGCAC+CGG | + | tig0021333:110009-110028 | Msa1390320:CDS | 55.0% | |
| GATGTTCCAAGCTAGCCACC+CGG | - | tig0021333:110031-110050 | None:intergenic | 55.0% | |
| ! | CTTCAGAAGCGGATTCGTGG+TGG | + | tig0021333:110050-110069 | Msa1390320:CDS | 55.0% |
| GCGGTGACCATAGGTTGTCG+GGG | - | tig0021333:105294-105313 | None:intergenic | 60.0% | |
| CCGCCGGTGACATGAATCTG+CGG | - | tig0021333:105313-105332 | None:intergenic | 60.0% | |
| CCGCAGATTCATGTCACCGG+CGG | + | tig0021333:105310-105329 | Msa1390320:CDS | 60.0% | |
| AGCGCTGCGACTCATCTTGG+AGG | - | tig0021333:105350-105369 | None:intergenic | 60.0% | |
| !! | GGAAGCGCTGCGACTCATCT+TGG | - | tig0021333:105353-105372 | None:intergenic | 60.0% |
| TGAGTCGCAGCGCTTCCGAA+TGG | + | tig0021333:105356-105375 | Msa1390320:CDS | 60.0% | |
| GAGTCGCAGCGCTTCCGAAT+GGG | + | tig0021333:105357-105376 | Msa1390320:CDS | 60.0% | |
| !!! | GACGGTGCCGTTTTGCCCAA+TGG | + | tig0021333:105472-105491 | Msa1390320:intron | 60.0% |
| GCTGAATCAGGCATGCGCTG+CGG | + | tig0021333:105549-105568 | Msa1390320:CDS | 60.0% | |
| CGCTGCGGTTGCCATGACTA+GGG | + | tig0021333:105564-105583 | Msa1390320:CDS | 60.0% | |
| TCTGACACGGATGGGTGTGG+TGG | - | tig0021333:106305-106324 | None:intergenic | 60.0% | |
| CACACCCATCCGTGTCAGAG+CGG | + | tig0021333:106306-106325 | Msa1390320:intron | 60.0% | |
| ! | TGTGCCGCTCTGACACGGAT+GGG | - | tig0021333:106313-106332 | None:intergenic | 60.0% |
| ! | CTGACTGTGCCGCTCTGACA+CGG | - | tig0021333:106318-106337 | None:intergenic | 60.0% |
| !! | GGTTGGTGCGGCCGATTTTG+TGG | + | tig0021333:106345-106364 | Msa1390320:intron | 60.0% |
| GGATGGAGCGGGTATGAAGC+AGG | + | tig0021333:106378-106397 | Msa1390320:intron | 60.0% | |
| AGGGATCGCAGGTGGTACCT+TGG | - | tig0021333:107695-107714 | None:intergenic | 60.0% | |
| GGTATGGAAGGGATCGCAGG+TGG | - | tig0021333:107703-107722 | None:intergenic | 60.0% | |
| ! | GCGCCTGGCTGACTCTCTAT+TGG | - | tig0021333:108801-108820 | None:intergenic | 60.0% |
| AACAGCTCCTCCGTTGCACC+GGG | + | tig0021333:110010-110029 | Msa1390320:CDS | 60.0% | |
| AAGCTAGCCACCCGGTGCAA+CGG | - | tig0021333:110023-110042 | None:intergenic | 60.0% | |
| ! | CAGAAGCGGATTCGTGGTGG+CGG | + | tig0021333:110053-110072 | Msa1390320:CDS | 60.0% |
| !! | GGTGGCGGTGTCGATTCTTG+TGG | + | tig0021333:110068-110087 | Msa1390320:CDS | 60.0% |
| ATTCATGTCACCGGCGGCGC+CGG | + | tig0021333:105316-105335 | Msa1390320:CDS | 65.0% | |
| GCCACCGGAGGTGGTCCATT+GGG | - | tig0021333:105490-105509 | None:intergenic | 65.0% | |
| GAATCAACGGCCACCGGAGG+TGG | - | tig0021333:105499-105518 | None:intergenic | 65.0% | |
| TCGGAATCAACGGCCACCGG+AGG | - | tig0021333:105502-105521 | None:intergenic | 65.0% | |
| GCGCTGCGGTTGCCATGACT+AGG | + | tig0021333:105563-105582 | Msa1390320:CDS | 65.0% | |
| GGTGCGGCGCGGAAAAAGTG+AGG | + | tig0021333:106279-106298 | Msa1390320:intron | 65.0% | |
| CGCTCTGACACGGATGGGTG+TGG | - | tig0021333:106308-106327 | None:intergenic | 65.0% | |
| ! | CTGTGCCGCTCTGACACGGA+TGG | - | tig0021333:106314-106333 | None:intergenic | 65.0% |
| CGTGTCAGAGCGGCACAGTC+AGG | + | tig0021333:106316-106335 | Msa1390320:intron | 65.0% | |
| GTCAGAGCGGCACAGTCAGG+TGG | + | tig0021333:106319-106338 | Msa1390320:intron | 65.0% | |
| AGCGGCACAGTCAGGTGGTG+CGG | + | tig0021333:106324-106343 | Msa1390320:intron | 65.0% | |
| GCACAGTCAGGTGGTGCGGT+TGG | + | tig0021333:106328-106347 | Msa1390320:intron | 65.0% | |
| ! | GTCAGGTGGTGCGGTTGGTG+CGG | + | tig0021333:106333-106352 | Msa1390320:intron | 65.0% |
| GGAGCGGGTATGAAGCAGGC+CGG | + | tig0021333:106382-106401 | Msa1390320:intron | 65.0% | |
| GGGTATGAAGCAGGCCGGAG+CGG | + | tig0021333:106387-106406 | Msa1390320:intron | 65.0% | |
| TGCGGAAATGCGGCGAGGCA+CGG | - | tig0021333:107006-107025 | None:intergenic | 65.0% | |
| GGCGGTATGGAAGGGATCGC+AGG | - | tig0021333:107706-107725 | None:intergenic | 65.0% | |
| ! | GTTGCACCGGGTGGCTAGCT+TGG | + | tig0021333:110022-110041 | Msa1390320:CDS | 65.0% |
| GCCCAATGGACCACCTCCGG+TGG | + | tig0021333:105486-105505 | Msa1390320:CDS | 70.0% | |
| GGCCACCGGAGGTGGTCCAT+TGG | - | tig0021333:105491-105510 | None:intergenic | 70.0% | |
| GCTGCTATTGCGGTGCGGCG+CGG | + | tig0021333:106268-106287 | Msa1390320:intron | 70.0% | |
| AGCTCCTCCGTTGCACCGGG+TGG | + | tig0021333:110013-110032 | Msa1390320:CDS | 70.0% | |
| CTAGCCACCCGGTGCAACGG+AGG | - | tig0021333:110020-110039 | None:intergenic | 70.0% | |
| GGATTCATCGCCGGCGCCGC+CGG | - | tig0021333:105329-105348 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021333 | gene | 105262 | 110474 | 105262 | ID=Msa1390320;Name=Msa1390320 |
| tig0021333 | mRNA | 105262 | 110474 | 105262 | ID=Msa1390320-mRNA-1;Parent=Msa1390320;Name=Msa1390320-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.83|0.71|1|0.66|0.71|7|359|406 |
| tig0021333 | exon | 105262 | 105448 | 105262 | ID=Msa1390320-mRNA-1:exon:12099;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 105473 | 105585 | 105473 | ID=Msa1390320-mRNA-1:exon:12100;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 107261 | 107357 | 107261 | ID=Msa1390320-mRNA-1:exon:12101;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 107644 | 107863 | 107644 | ID=Msa1390320-mRNA-1:exon:12102;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 108790 | 108865 | 108790 | ID=Msa1390320-mRNA-1:exon:12103;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 108981 | 109106 | 108981 | ID=Msa1390320-mRNA-1:exon:12104;Parent=Msa1390320-mRNA-1 |
| tig0021333 | exon | 109714 | 110474 | 109714 | ID=Msa1390320-mRNA-1:exon:12105;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 105262 | 105448 | 105262 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 105473 | 105585 | 105473 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 107261 | 107357 | 107261 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 107644 | 107863 | 107644 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 108790 | 108865 | 108790 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 108981 | 109106 | 108981 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | CDS | 109714 | 110115 | 109714 | ID=Msa1390320-mRNA-1:cds;Parent=Msa1390320-mRNA-1 |
| tig0021333 | three_prime_UTR | 110116 | 110474 | 110116 | ID=Msa1390320-mRNA-1:three_prime_utr;Parent=Msa1390320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
