Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392550 | XP_024627855.2 | 94.435 | 575 | 32 | 0 | 35 | 609 | 1 | 575 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392550 | sp|Q8LP17|CCD1_PEA | 82.552 | 533 | 91 | 1 | 79 | 609 | 9 | 541 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392550 | A0A072TNU6 | 94.435 | 575 | 32 | 0 | 35 | 609 | 1 | 575 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1392550 | Msa1456490 | 0.814209 | 1.731269e-51 | -8.615850e-47 |
| Msa1240200 | Msa1392550 | 0.929302 | 8.448420e-93 | -8.615850e-47 |
| Msa1240230 | Msa1392550 | 0.931467 | 3.620187e-94 | -8.615850e-47 |
| Msa1320640 | Msa1392550 | 0.940215 | 3.413489e-100 | -8.615850e-47 |
| Msa1186000 | Msa1392550 | 0.896753 | 2.725426e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392550 | MtrunA17_Chr8g0352261 | 94.435 | 575 | 32 | 0 | 35 | 609 | 1 | 575 | 0.0 | 1135 |
| Msa1392550 | MtrunA17_Chr8g0352301 | 95.652 | 575 | 25 | 0 | 35 | 609 | 1 | 575 | 0.0 | 1115 |
| Msa1392550 | MtrunA17_Chr8g0352311 | 90.070 | 574 | 57 | 0 | 36 | 609 | 3 | 576 | 0.0 | 1086 |
| Msa1392550 | MtrunA17_Chr8g0352321 | 83.738 | 535 | 85 | 1 | 77 | 609 | 6 | 540 | 0.0 | 937 |
| Msa1392550 | MtrunA17_Chr8g0376401 | 39.315 | 496 | 269 | 12 | 118 | 606 | 135 | 605 | 8.04e-106 | 332 |
| Msa1392550 | MtrunA17_Chr5g0407951 | 37.097 | 496 | 283 | 9 | 116 | 603 | 101 | 575 | 2.14e-104 | 327 |
| Msa1392550 | MtrunA17_Chr2g0312951 | 37.200 | 500 | 278 | 14 | 118 | 606 | 135 | 609 | 3.87e-101 | 320 |
| Msa1392550 | MtrunA17_Chr5g0407941 | 36.089 | 496 | 287 | 10 | 116 | 603 | 100 | 573 | 1.07e-98 | 312 |
| Msa1392550 | MtrunA17_Chr5g0407931 | 34.669 | 499 | 294 | 9 | 116 | 605 | 141 | 616 | 8.89e-96 | 306 |
| Msa1392550 | MtrunA17_Chr3g0140121 | 31.434 | 544 | 323 | 18 | 86 | 598 | 54 | 578 | 4.85e-68 | 231 |
| Msa1392550 | MtrunA17_Chr3g0140171 | 24.016 | 508 | 302 | 22 | 134 | 598 | 96 | 562 | 4.85e-20 | 94.0 |
| Msa1392550 | MtrunA17_Chr7g0239811 | 22.515 | 493 | 302 | 21 | 147 | 598 | 4 | 457 | 2.05e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392550 | AT3G63520.1 | 77.083 | 528 | 116 | 3 | 81 | 606 | 11 | 535 | 0.0 | 853 |
| Msa1392550 | AT1G78390.1 | 39.357 | 498 | 269 | 12 | 118 | 607 | 183 | 655 | 9.93e-109 | 341 |
| Msa1392550 | AT3G14440.1 | 38.400 | 500 | 272 | 12 | 118 | 606 | 123 | 597 | 4.63e-106 | 332 |
| Msa1392550 | AT1G30100.1 | 37.244 | 537 | 297 | 15 | 87 | 607 | 77 | 589 | 6.46e-106 | 332 |
| Msa1392550 | AT3G24220.1 | 37.500 | 504 | 273 | 14 | 118 | 607 | 101 | 576 | 2.36e-100 | 317 |
| Msa1392550 | AT4G19170.1 | 35.913 | 504 | 291 | 10 | 116 | 605 | 109 | 594 | 9.61e-99 | 313 |
| Msa1392550 | AT4G18350.1 | 35.614 | 497 | 292 | 11 | 118 | 606 | 106 | 582 | 2.76e-95 | 304 |
| Msa1392550 | AT4G32810.1 | 23.564 | 505 | 321 | 22 | 134 | 601 | 94 | 570 | 2.70e-18 | 89.0 |
| Msa1392550 | AT4G32810.2 | 22.929 | 519 | 333 | 22 | 134 | 601 | 94 | 596 | 1.26e-16 | 84.0 |
Find 138 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTATTCTTCTTGTTTA+AGG | 0.082540 | tig0021518:+3712 | None:intergenic |
| CGAAAATTACGCAATATTTA+TGG | 0.106835 | tig0021518:-2696 | Msa1392550:CDS |
| TCTTCTTCAGAATCGGTTTC+TGG | 0.147566 | tig0021518:+1590 | None:intergenic |
| CCCCGTCCCCGACGGGTTTC+GGG | 0.154422 | tig0021518:+8539 | None:intergenic |
| TCCCCGTCCCCGACGGGTTT+CGG | 0.178194 | tig0021518:+8538 | None:intergenic |
| ATTAAGGATCTTCCTGTTAA+AGG | 0.212037 | tig0021518:-4487 | Msa1392550:CDS |
| ATCCCTCCTCTGAGTGAAAA+TGG | 0.255045 | tig0021518:+4661 | None:intergenic |
| AAAATACTAGATGTTTCTTA+TGG | 0.257831 | tig0021518:-3522 | Msa1392550:CDS |
| GACACCAAAACGAGCTTTCT+TGG | 0.264898 | tig0021518:+2495 | None:intergenic |
| TGGATCTTCCTGTGTACTTT+AGG | 0.275718 | tig0021518:-2676 | Msa1392550:CDS |
| AGTTGTAATGCTGTCTAATA+TGG | 0.280308 | tig0021518:+1748 | None:intergenic |
| AGCAAATAAACACACCATTA+TGG | 0.282253 | tig0021518:+2407 | None:intergenic |
| TTATGGAATATGAAGCAATT+TGG | 0.283716 | tig0021518:+2424 | None:intergenic |
| ATGGGATCTGATATTGTAAT+TGG | 0.286669 | tig0021518:+2743 | None:intergenic |
| TTCTATTTCTGCAGGTTTGA+TGG | 0.299000 | tig0021518:-3946 | Msa1392550:intron |
| GGTTTGATCTTTACACAAAT+AGG | 0.302078 | tig0021518:+4682 | None:intergenic |
| CTTTGTCATCACTGGATTGC+TGG | 0.302688 | tig0021518:-4544 | Msa1392550:CDS |
| TTAACAGGAAGATCCTTAAT+AGG | 0.304030 | tig0021518:+4490 | None:intergenic |
| AGATGAGACACCTCCTATTA+AGG | 0.320799 | tig0021518:-4503 | Msa1392550:CDS |
| TTCAAAAGCTGTTGATTTGT+TGG | 0.325206 | tig0021518:-4602 | Msa1392550:CDS |
| GGGACGCGTGGGATGTAAAT+AGG | 0.333839 | tig0021518:+1611 | None:intergenic |
| TTGAGTGCCAAACCTGATTT+CGG | 0.334319 | tig0021518:-1707 | Msa1392550:CDS |
| CTTCTTCAGAATCGGTTTCT+GGG | 0.337418 | tig0021518:+1591 | None:intergenic |
| ATGAATTGCAGAATGATTCA+TGG | 0.345194 | tig0021518:-3792 | Msa1392550:intron |
| ATCTGTTTACACATCTTTGT+AGG | 0.360877 | tig0021518:-662 | Msa1392550:three_prime_UTR |
| ACGGGAGAAAACTTCGGATT+TGG | 0.364830 | tig0021518:+4191 | None:intergenic |
| GCAGGGGAAATGTTTACATT+TGG | 0.367200 | tig0021518:-2836 | Msa1392550:intron |
| ATGATGGATTTACCAGTATA+AGG | 0.367353 | tig0021518:+3072 | None:intergenic |
| GGGTCTACTTGGACTTCTAA+TGG | 0.369162 | tig0021518:-3574 | Msa1392550:CDS |
| CTGTCAACATAATTATAGTT+TGG | 0.369425 | tig0021518:+708 | None:intergenic |
| CTAGATGTTTCTTATGGAAC+TGG | 0.383496 | tig0021518:-3516 | Msa1392550:CDS |
| TTGGATGAGAAGTGAAATAA+TGG | 0.384814 | tig0021518:+3103 | None:intergenic |
| AATTGCTTCATATTCCATAA+TGG | 0.387800 | tig0021518:-2421 | Msa1392550:intron |
| AGGAAACAGAAGTATGTATA+TGG | 0.393243 | tig0021518:-1773 | Msa1392550:CDS |
| TCAACCAAGAAAGCTCGTTT+TGG | 0.397155 | tig0021518:-2499 | Msa1392550:CDS |
| TCCTGTTAAAGGACACCTTC+CGG | 0.400200 | tig0021518:-4476 | Msa1392550:intron |
| ATTCTTCACTTTGTCATCAC+TGG | 0.406737 | tig0021518:-4552 | Msa1392550:CDS |
| ACCGGAAGGTGTCCTTTAAC+AGG | 0.408230 | tig0021518:+4475 | None:intergenic |
| ATTACTCTGTATGTGATATA+TGG | 0.409406 | tig0021518:+2797 | None:intergenic |
| GTTTGGCTTGTTCTTGCAGT+TGG | 0.411419 | tig0021518:+725 | None:intergenic |
| ACCCGAAACCCGTCGGGGAC+GGG | 0.411699 | tig0021518:-8540 | Msa1392550:CDS |
| GTTTCTTATGGAACTGGAAC+AGG | 0.412346 | tig0021518:-3510 | Msa1392550:intron |
| TCTGATATTGTAATTGGAAC+AGG | 0.417939 | tig0021518:+2749 | None:intergenic |
| TCCATCATCTTCTTCAGAAT+CGG | 0.418255 | tig0021518:+1583 | None:intergenic |
| TTCTGCAGGTTTGATGGAGA+TGG | 0.418544 | tig0021518:-3940 | Msa1392550:intron |
| GCTTGAATGGAGAGTTTGTC+AGG | 0.422666 | tig0021518:-4220 | Msa1392550:CDS |
| CTCCCGTCGCTGGATATCAT+TGG | 0.423893 | tig0021518:-4175 | Msa1392550:intron |
| GGCAATTCTACAACTGCAAC+TGG | 0.426544 | tig0021518:+1381 | None:intergenic |
| TACAGAGTAATTTCAAAAGA+TGG | 0.427569 | tig0021518:-2785 | Msa1392550:CDS |
| GAAGTTGGAGGAAATGTTCA+TGG | 0.434198 | tig0021518:-1671 | Msa1392550:CDS |
| CCCGAAACCCGTCGGGGACG+GGG | 0.440599 | tig0021518:-8539 | Msa1392550:CDS |
| TTGTACATGATGAAAATACT+AGG | 0.447103 | tig0021518:-1547 | Msa1392550:intron |
| GGCAAAATCATGCACCATGA+TGG | 0.450102 | tig0021518:+2724 | None:intergenic |
| ATATTAGACAGCATTACAAC+TGG | 0.450765 | tig0021518:-1746 | Msa1392550:CDS |
| AAACCATATGGAACTCTTTG+AGG | 0.453564 | tig0021518:+1360 | None:intergenic |
| ATCCACTACAGGGATGGAAT+GGG | 0.454549 | tig0021518:-8571 | None:intergenic |
| GGCAAAACCAAGCTTGAAGT+TGG | 0.456425 | tig0021518:-1686 | Msa1392550:CDS |
| AGGGATACCCGAAACCCGTC+GGG | 0.457029 | tig0021518:-8546 | Msa1392550:CDS |
| GTTCATGGTATCTATGACTT+GGG | 0.458278 | tig0021518:-1656 | Msa1392550:CDS |
| CTCAAGTAGATAACATCGTA+TGG | 0.462204 | tig0021518:-576 | Msa1392550:three_prime_UTR |
| CATGGTTTGCGCATCAAAGA+TGG | 0.465009 | tig0021518:-3774 | Msa1392550:CDS |
| ATTTCCTCCAACTTCAAGCT+TGG | 0.466482 | tig0021518:+1679 | None:intergenic |
| CTTAAACAAGAAGAATACTT+TGG | 0.469018 | tig0021518:-3711 | Msa1392550:CDS |
| CGGGTAAGTATATAAGAGTA+AGG | 0.471008 | tig0021518:-8473 | Msa1392550:intron |
| AGCTAATGCTTGGGAGGAGG+AGG | 0.473190 | tig0021518:-2251 | Msa1392550:CDS |
| GGAGATGTCAAGGGTCTACT+TGG | 0.480304 | tig0021518:-3585 | Msa1392550:CDS |
| CTGGATATGGATAGAGTAAC+GGG | 0.481786 | tig0021518:-8492 | Msa1392550:CDS |
| ATGAGGTTTAACATGAAAAC+CGG | 0.482798 | tig0021518:-2022 | Msa1392550:CDS |
| AAGAAGGCATGAAAACCATA+TGG | 0.483990 | tig0021518:+1348 | None:intergenic |
| ATCTTTCCAGGTATGAAATG+AGG | 0.484880 | tig0021518:-2039 | Msa1392550:intron |
| TATCCACTACAGGGATGGAA+TGG | 0.485073 | tig0021518:-8572 | None:intergenic |
| ACTAGATTATGACAAGAGAT+TGG | 0.485727 | tig0021518:-3127 | Msa1392550:CDS |
| TTGCCTCAAAGAGTTCCATA+TGG | 0.490409 | tig0021518:-1363 | Msa1392550:CDS |
| TGGAGGCTGTAAATTTATGA+AGG | 0.491369 | tig0021518:-3691 | Msa1392550:intron |
| AAACAAGAAGAATACTTTGG+AGG | 0.494373 | tig0021518:-3708 | Msa1392550:CDS |
| TACCCGAAACCCGTCGGGGA+CGG | 0.496132 | tig0021518:-8541 | Msa1392550:CDS |
| CAGATCGACGCAGCGTTGTA+CGG | 0.502437 | tig0021518:+680 | None:intergenic |
| CAGGTCTTGTATATCACAAT+GGG | 0.504961 | tig0021518:-3388 | Msa1392550:CDS |
| CTACAGGGATGGAATGGGGC+AGG | 0.506277 | tig0021518:-8566 | None:intergenic |
| TGTCCAATTTCAGCTAATAC+AGG | 0.510396 | tig0021518:-3407 | Msa1392550:intron |
| ATTTCATCCCCGTCCCCGAC+GGG | 0.514316 | tig0021518:+8532 | None:intergenic |
| TCCTGTGTACTTTAGGCCAA+AGG | 0.519329 | tig0021518:-2669 | Msa1392550:intron |
| TGTTCATGGTATCTATGACT+TGG | 0.521006 | tig0021518:-1657 | Msa1392550:CDS |
| TCTGCAGGTTTGATGGAGAT+GGG | 0.527664 | tig0021518:-3939 | Msa1392550:intron |
| AATTTCATCCCCGTCCCCGA+CGG | 0.527751 | tig0021518:+8531 | None:intergenic |
| ACTAGCTAATGCTTGGGAGG+AGG | 0.529242 | tig0021518:-2254 | Msa1392550:intron |
| GCAAAATCATGCACCATGAT+GGG | 0.530157 | tig0021518:+2725 | None:intergenic |
| GAATCGGTTTCTGGGACGCG+TGG | 0.530639 | tig0021518:+1599 | None:intergenic |
| TCATGCCTTCTTTCTGACAG+AGG | 0.531055 | tig0021518:-1337 | Msa1392550:intron |
| TTCACTAGCTAATGCTTGGG+AGG | 0.535402 | tig0021518:-2257 | Msa1392550:intron |
| ACCGATTCTGAAGAAGATGA+TGG | 0.537019 | tig0021518:-1584 | Msa1392550:CDS |
| GTGGAACCAAAACCAAGAAA+AGG | 0.539039 | tig0021518:-4631 | Msa1392550:CDS |
| CATCTTTAGCATATCGAGGT+AGG | 0.546060 | tig0021518:+2473 | None:intergenic |
| GTGTATCTTTCATTCACCCT+AGG | 0.548513 | tig0021518:+1956 | None:intergenic |
| ACAAACCTCTGTCAGAAAGA+AGG | 0.550757 | tig0021518:+1332 | None:intergenic |
| AATGGAGAGTTTGTCAGGGT+GGG | 0.552427 | tig0021518:-4215 | Msa1392550:CDS |
| TTACTCTATCCATATCCAGC+GGG | 0.552953 | tig0021518:+8496 | None:intergenic |
| TACCAATGATATCCAGCGAC+GGG | 0.554371 | tig0021518:+4173 | None:intergenic |
| GGAGGTGTCTCATCTTTGAC+AGG | 0.555200 | tig0021518:+4511 | None:intergenic |
| CCGACTGAAGAATCTAGACT+TGG | 0.557672 | tig0021518:-2206 | Msa1392550:CDS |
| GCAGTAACATAAGCAGTAGC+AGG | 0.559017 | tig0021518:-4777 | Msa1392550:intron |
| CAGGGATACCCGAAACCCGT+CGG | 0.559984 | tig0021518:-8547 | Msa1392550:CDS |
| TCAAGTAGATAACATCGTAT+GGG | 0.565206 | tig0021518:-575 | Msa1392550:three_prime_UTR |
| TACAATATCAGATCCCATCA+TGG | 0.567803 | tig0021518:-2738 | Msa1392550:CDS |
| CATGGTCAGCGAGGATGTCA+AGG | 0.572348 | tig0021518:-2182 | Msa1392550:CDS |
| AGCTTCTCAAAAGAAACTAT+CGG | 0.572992 | tig0021518:-1996 | Msa1392550:CDS |
| AAAACCAAGCTTGAAGTTGG+AGG | 0.573189 | tig0021518:-1683 | Msa1392550:CDS |
| TTTCAGATTGGAGATGTCAA+GGG | 0.574258 | tig0021518:-3594 | Msa1392550:intron |
| GATGGTAATTTGCATACACT+TGG | 0.580492 | tig0021518:-3153 | Msa1392550:CDS |
| CAAGTAGATAACATCGTATG+GGG | 0.582500 | tig0021518:-574 | None:intergenic |
| TACAGGGATGGAATGGGGCA+GGG | 0.582554 | tig0021518:-8565 | None:intergenic |
| AAGATGATAAGCTCATAAGA+TGG | 0.586222 | tig0021518:-2456 | Msa1392550:CDS |
| ACAGGAAGATCCTTAATAGG+AGG | 0.591560 | tig0021518:+4493 | None:intergenic |
| TGTACCACGGTAACTTCTCA+AGG | 0.592432 | tig0021518:+4747 | None:intergenic |
| AATCGGTTTCTGGGACGCGT+GGG | 0.593961 | tig0021518:+1600 | None:intergenic |
| ACAGGTCTTGTATATCACAA+TGG | 0.598621 | tig0021518:-3389 | Msa1392550:CDS |
| CTTGAATGGAGAGTTTGTCA+GGG | 0.604774 | tig0021518:-4219 | Msa1392550:CDS |
| CCAAGTCTAGATTCTTCAGT+CGG | 0.615166 | tig0021518:+2206 | None:intergenic |
| GCTGGATATGGATAGAGTAA+CGG | 0.621373 | tig0021518:-8493 | Msa1392550:CDS |
| TCCACTACAGGGATGGAATG+GGG | 0.630328 | tig0021518:-8570 | None:intergenic |
| TACTCTATCCATATCCAGCG+GGG | 0.633056 | tig0021518:+8497 | None:intergenic |
| TTATCATCTTTAGCATATCG+AGG | 0.636693 | tig0021518:+2469 | None:intergenic |
| GAATGGAGAGTTTGTCAGGG+TGG | 0.641408 | tig0021518:-4216 | Msa1392550:CDS |
| CCAGCGACGGGAGAAAACTT+CGG | 0.645402 | tig0021518:+4185 | None:intergenic |
| TGAATGAAAGATACACCGGC+AGG | 0.645727 | tig0021518:-1949 | Msa1392550:intron |
| TTACCAATGATATCCAGCGA+CGG | 0.657115 | tig0021518:+4172 | None:intergenic |
| ACCTTTGGCCTAAAGTACAC+AGG | 0.658603 | tig0021518:+2668 | None:intergenic |
| TATTAGACAGCATTACAACT+GGG | 0.675970 | tig0021518:-1745 | Msa1392550:CDS |
| GTTACTCTATCCATATCCAG+CGG | 0.678093 | tig0021518:+8495 | None:intergenic |
| GAAGAATCTAGACTTGGACA+TGG | 0.692460 | tig0021518:-2200 | Msa1392550:CDS |
| AGGGTGAATGAAAGATACAC+CGG | 0.694809 | tig0021518:-1953 | Msa1392550:CDS |
| ACTCTATCCATATCCAGCGG+GGG | 0.696937 | tig0021518:+8498 | None:intergenic |
| AGACTTGGACATGGTCAGCG+AGG | 0.698435 | tig0021518:-2191 | Msa1392550:CDS |
| ACTTGAAGACTTGTGTACCA+CGG | 0.708216 | tig0021518:+4734 | None:intergenic |
| AAGTAGATAACATCGTATGG+GGG | 0.721243 | tig0021518:-573 | None:intergenic |
| AACACCTTGAGAAGTTACCG+TGG | 0.741009 | tig0021518:-4751 | Msa1392550:CDS |
| GGGATACCCGAAACCCGTCG+GGG | 0.744120 | tig0021518:-8545 | Msa1392550:CDS |
| ACTCTGTATGTGATATATGG+CGG | 0.752073 | tig0021518:+2800 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTATCCATTTTTTTTA+AGG | + | tig0021518:1286-1305 | None:intergenic | 10.0% |
| !!! | ATAAAGAAAAGTTTAAAATA+GGG | + | tig0021518:1431-1450 | None:intergenic | 10.0% |
| !!! | AATAAAGAAAAGTTTAAAAT+AGG | + | tig0021518:1432-1451 | None:intergenic | 10.0% |
| !!! | TGAGTTTTTTTTTTTTTTTA+TGG | + | tig0021518:1829-1848 | None:intergenic | 10.0% |
| !!! | TAATATATCAACAAATATTT+TGG | + | tig0021518:2573-2592 | None:intergenic | 10.0% |
| !! | TGTAAAATATTTGAAAAAAA+AGG | - | tig0021518:2732-2751 | Msa1392550:CDS | 10.0% |
| !!! | ATTAAAAATTATGTTTTTTG+TGG | + | tig0021518:2976-2995 | None:intergenic | 10.0% |
| !! | TCAAATATATATATGATTAA+AGG | + | tig0021518:5234-5253 | None:intergenic | 10.0% |
| !! | TGAAAAAAAATTCATATAAA+AGG | + | tig0021518:6860-6879 | None:intergenic | 10.0% |
| !! | AATTACATTGAGTTATTAAT+AGG | + | tig0021518:951-970 | None:intergenic | 15.0% |
| !! | TAAAGATTCCTTAAAAAAAA+TGG | - | tig0021518:1275-1294 | Msa1392550:intron | 15.0% |
| !! | ATGATTGAATTAAAATAGTT+GGG | + | tig0021518:1336-1355 | None:intergenic | 15.0% |
| !! | AATGATTGAATTAAAATAGT+TGG | + | tig0021518:1337-1356 | None:intergenic | 15.0% |
| !! | AAGAAATTAAAATGATAAGA+TGG | + | tig0021518:1395-1414 | None:intergenic | 15.0% |
| !!! | TAAAGAAAAGTTTAAAATAG+GGG | + | tig0021518:1430-1449 | None:intergenic | 15.0% |
| !!! | GAAGACAATTTTATATTTTT+GGG | + | tig0021518:1599-1618 | None:intergenic | 15.0% |
| !!! | TGAAGACAATTTTATATTTT+TGG | + | tig0021518:1600-1619 | None:intergenic | 15.0% |
| !!! | ATGATAGATCTTTTTTTTAT+AGG | + | tig0021518:2090-2109 | None:intergenic | 15.0% |
| !! | TATTTGATATATATCCAATA+CGG | - | tig0021518:3243-3262 | Msa1392550:intron | 15.0% |
| !! | TACAAATAAGTCAATTATTA+GGG | + | tig0021518:3321-3340 | None:intergenic | 15.0% |
| !! | TTACAAATAAGTCAATTATT+AGG | + | tig0021518:3322-3341 | None:intergenic | 15.0% |
| !! | TTTAATACATATACAAACAA+AGG | + | tig0021518:3477-3496 | None:intergenic | 15.0% |
| !! | TTATCAATTTATATAGATCT+TGG | + | tig0021518:3817-3836 | None:intergenic | 15.0% |
| !! | TTCTTCTAATATTCTATTAT+AGG | - | tig0021518:3962-3981 | Msa1392550:intron | 15.0% |
| !! | AATTCATGTAAAAACATAAT+AGG | + | tig0021518:4075-4094 | None:intergenic | 15.0% |
| !!! | GTAATTTCCAATTTTATATT+TGG | + | tig0021518:4113-4132 | None:intergenic | 15.0% |
| !!! | ATATCTTTTTTAACAGTAAA+AGG | + | tig0021518:5296-5315 | None:intergenic | 15.0% |
| !! | TTAAAAAAGATATTAACAGA+AGG | - | tig0021518:5303-5322 | Msa1392550:intron | 15.0% |
| !!! | TCATTTTCTTAAAATATTAG+TGG | - | tig0021518:6223-6242 | Msa1392550:intron | 15.0% |
| !! | ATTCATCATATTATATTAAG+AGG | + | tig0021518:6759-6778 | None:intergenic | 15.0% |
| !!! | TTTCTAATTATGTTTTAAGA+TGG | - | tig0021518:7264-7283 | Msa1392550:intron | 15.0% |
| !!! | AATTTTTTTTTTGAGGTGTT+GGG | + | tig0021518:917-936 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTTTGAGGTGT+TGG | + | tig0021518:918-937 | None:intergenic | 20.0% |
| !! | TGTGTACAATTTATTACATA+TGG | - | tig0021518:995-1014 | Msa1392550:intron | 20.0% |
| !!! | TCTCTCTCTTTAATTTTTAT+GGG | + | tig0021518:1021-1040 | None:intergenic | 20.0% |
| !! | ATAAAAATTAAAGAGAGAGA+GGG | - | tig0021518:1021-1040 | Msa1392550:intron | 20.0% |
| !!! | AATCAAGATTTTACCAAAAT+AGG | - | tig0021518:1160-1179 | Msa1392550:intron | 20.0% |
| !! | AAATGGATAATTAAAGAAAG+AGG | - | tig0021518:1292-1311 | Msa1392550:intron | 20.0% |
| !! | ATATAAAATTGTCTTCATAC+CGG | - | tig0021518:1603-1622 | Msa1392550:CDS | 20.0% |
| !! | AGTAACTTTCAACTAATTTA+AGG | - | tig0021518:1870-1889 | Msa1392550:intron | 20.0% |
| !! | GTATATTTATTGAAAAACCA+GGG | + | tig0021518:2040-2059 | None:intergenic | 20.0% |
| !! | AGTATATTTATTGAAAAACC+AGG | + | tig0021518:2041-2060 | None:intergenic | 20.0% |
| !! | ATAAATATACTCGTTATTTG+TGG | - | tig0021518:2050-2069 | Msa1392550:intron | 20.0% |
| !! | AAATCTATCAAAATACACAT+TGG | - | tig0021518:2313-2332 | Msa1392550:intron | 20.0% |
| !!! | ATTCTAAATTTGTTAGGTTT+GGG | + | tig0021518:2462-2481 | None:intergenic | 20.0% |
| !!! | AATTCTAAATTTGTTAGGTT+TGG | + | tig0021518:2463-2482 | None:intergenic | 20.0% |
| !!! | TGTTCAATTCTAAATTTGTT+AGG | + | tig0021518:2468-2487 | None:intergenic | 20.0% |
| !! | AACAGATTCAAATGAAATAT+AGG | - | tig0021518:2515-2534 | Msa1392550:CDS | 20.0% |
| !!! | ATCAACAAATATTTTGGTTT+GGG | + | tig0021518:2567-2586 | None:intergenic | 20.0% |
| !!! | TATCAACAAATATTTTGGTT+TGG | + | tig0021518:2568-2587 | None:intergenic | 20.0% |
| !! | AGTTAGTAGTAGTATTAATT+AGG | - | tig0021518:3521-3540 | Msa1392550:CDS | 20.0% |
| !! | GTTAGTAGTAGTATTAATTA+GGG | - | tig0021518:3522-3541 | Msa1392550:CDS | 20.0% |
| !! | TTAGTAGTAGTATTAATTAG+GGG | - | tig0021518:3523-3542 | Msa1392550:CDS | 20.0% |
| !! | ATGCATCTAATAATTTGAAA+AGG | - | tig0021518:3569-3588 | Msa1392550:CDS | 20.0% |
| !! | TGCATCTAATAATTTGAAAA+GGG | - | tig0021518:3570-3589 | Msa1392550:CDS | 20.0% |
| !!! | TGAAGTCAAATACTTATTTT+GGG | + | tig0021518:3755-3774 | None:intergenic | 20.0% |
| !!! | TTGAAGTCAAATACTTATTT+TGG | + | tig0021518:3756-3775 | None:intergenic | 20.0% |
| !! | ATTGAAATAAGATAAAGTAG+AGG | + | tig0021518:4047-4066 | None:intergenic | 20.0% |
| !!! | ATGTTTTTACATGAATTTGT+AGG | - | tig0021518:4078-4097 | Msa1392550:intron | 20.0% |
| !!! | TTTTTCCTTGTATAGTTATA+TGG | - | tig0021518:4999-5018 | Msa1392550:intron | 20.0% |
| !! | TATATATTTGATGCTTGATT+AGG | - | tig0021518:5243-5262 | Msa1392550:intron | 20.0% |
| !! | AAAATACTAGATGTTTCTTA+TGG | - | tig0021518:5611-5630 | Msa1392550:intron | 20.0% |
| !!! | CATAAATATTGCGTAATTTT+CGG | + | tig0021518:6439-6458 | None:intergenic | 20.0% |
| !!! | ATTTTCTATAGATTTTCCTA+GGG | - | tig0021518:7161-7180 | Msa1392550:intron | 20.0% |
| !! | ATATAGCAAAATACATGTTA+TGG | + | tig0021518:7330-7349 | None:intergenic | 20.0% |
| !!! | CTATGACATGATTTAATTTT+AGG | - | tig0021518:7632-7651 | Msa1392550:intron | 20.0% |
| !! | TTGAATTGTTTAACATAGAA+CGG | - | tig0021518:7940-7959 | Msa1392550:intron | 20.0% |
| !!! | TTTTCATATAATGTGCTTAT+TGG | + | tig0021518:8141-8160 | None:intergenic | 20.0% |
| !!! | CTCATTTTTTCTAAAGAAAA+AGG | + | tig0021518:8212-8231 | None:intergenic | 20.0% |
| ! | AAGTATATAAGAGTAAGGTA+TGG | - | tig0021518:665-684 | Msa1392550:three_prime_UTR | 25.0% |
| ! | AGTATATAAGAGTAAGGTAT+GGG | - | tig0021518:666-685 | Msa1392550:three_prime_UTR | 25.0% |
| ! | AATTTGTCCAATTCATGATT+AGG | + | tig0021518:736-755 | None:intergenic | 25.0% |
| !!! | TATTTTTGATTGCACGATTA+TGG | + | tig0021518:771-790 | None:intergenic | 25.0% |
| !!! | CTCTCTCTCTTTAATTTTTA+TGG | + | tig0021518:1022-1041 | None:intergenic | 25.0% |
| ! | CATAAAAATTAAAGAGAGAG+AGG | - | tig0021518:1020-1039 | Msa1392550:intron | 25.0% |
| ! | CATTGTAAAGAGAAAATGTT+TGG | + | tig0021518:1077-1096 | None:intergenic | 25.0% |
| !! | AACATTTTCTCTTTACAATG+AGG | - | tig0021518:1077-1096 | Msa1392550:intron | 25.0% |
| !! | ACATTTTCTCTTTACAATGA+GGG | - | tig0021518:1078-1097 | Msa1392550:intron | 25.0% |
| ! | TATTAATTCCGATGCTAAAT+AGG | - | tig0021518:1105-1124 | Msa1392550:intron | 25.0% |
| !!! | ATATGTTGGTTTTCCTATTT+TGG | + | tig0021518:1176-1195 | None:intergenic | 25.0% |
| ! | GTACAAATTTCAACATATGT+TGG | + | tig0021518:1190-1209 | None:intergenic | 25.0% |
| ! | CTAATCATTCTAACCATAAA+CGG | - | tig0021518:1218-1237 | Msa1392550:intron | 25.0% |
| ! | AAATCAATGCACAATTGATA+AGG | - | tig0021518:1247-1266 | Msa1392550:intron | 25.0% |
| ! | TGTTCTTGTCTTAAATTCTA+TGG | - | tig0021518:1359-1378 | Msa1392550:CDS | 25.0% |
| ! | TGTGAATTCTCTTAATAAGT+TGG | + | tig0021518:1486-1505 | None:intergenic | 25.0% |
| !!! | TTATTCACTTTTGAGATTAG+AGG | - | tig0021518:1929-1948 | Msa1392550:intron | 25.0% |
| !!! | TATTCACTTTTGAGATTAGA+GGG | - | tig0021518:1930-1949 | Msa1392550:intron | 25.0% |
| ! | AATGAAGATATATGACAGAA+AGG | + | tig0021518:1980-1999 | None:intergenic | 25.0% |
| ! | TTCATACATGTTCATAAGTT+AGG | - | tig0021518:2119-2138 | Msa1392550:intron | 25.0% |
| !!! | TTTTTTACTCAACCTAAACT+TGG | + | tig0021518:2160-2179 | None:intergenic | 25.0% |
| ! | GGATTCATTCATTAGATTAT+TGG | - | tig0021518:2259-2278 | Msa1392550:intron | 25.0% |
| ! | CATTCATTAGATTATTGGTA+TGG | - | tig0021518:2264-2283 | Msa1392550:intron | 25.0% |
| !!! | TGTTGATTTGAAAGTGTTTT+TGG | + | tig0021518:2362-2381 | None:intergenic | 25.0% |
| !!! | CACTTTTTTATTAACAGATC+AGG | - | tig0021518:2399-2418 | Msa1392550:intron | 25.0% |
| !!! | CCTGAATTTTAAAAATTTCG+TGG | + | tig0021518:2658-2677 | None:intergenic | 25.0% |
| !!! | CCACGAAATTTTTAAAATTC+AGG | - | tig0021518:2655-2674 | Msa1392550:intron | 25.0% |
| ! | ATTGTGTTGTGAAAATTCAA+TGG | + | tig0021518:3056-3075 | None:intergenic | 25.0% |
| ! | TATCAAATATCGATACTTCA+CGG | + | tig0021518:3232-3251 | None:intergenic | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | + | tig0021518:3394-3413 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | + | tig0021518:3395-3414 | None:intergenic | 25.0% |
| ! | TATACAAACAAAGGACAATA+TGG | + | tig0021518:3468-3487 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | tig0021518:3533-3552 | Msa1392550:CDS | 25.0% |
| !! | ATTAATTAGGGGTATGTTTA+GGG | - | tig0021518:3534-3553 | Msa1392550:CDS | 25.0% |
| ! | GCATCTAATAATTTGAAAAG+GGG | - | tig0021518:3571-3590 | Msa1392550:CDS | 25.0% |
| ! | AGACAAAAACAAAGTCAAAT+GGG | - | tig0021518:3605-3624 | Msa1392550:intron | 25.0% |
| !! | ACTTGGGCATTTAATAATTT+TGG | + | tig0021518:3680-3699 | None:intergenic | 25.0% |
| !!! | GAAGTCAAATACTTATTTTG+GGG | + | tig0021518:3754-3773 | None:intergenic | 25.0% |
| ! | TATTGATAAAGTACATTGCA+TGG | + | tig0021518:3880-3899 | None:intergenic | 25.0% |
| ! | GGAAAAGATCTAATTAATCT+TGG | + | tig0021518:3932-3951 | None:intergenic | 25.0% |
| ! | TATTAGAAGAAACAAAACAG+TGG | + | tig0021518:3953-3972 | None:intergenic | 25.0% |
| ! | AACAAGGCCAAATATAAAAT+TGG | - | tig0021518:4103-4122 | Msa1392550:intron | 25.0% |
| !!! | ATTTTAGTCCATTAAACTCT+CGG | + | tig0021518:4309-4328 | None:intergenic | 25.0% |
| ! | TGAAACCATATAACTATACA+AGG | + | tig0021518:5007-5026 | None:intergenic | 25.0% |
| !!! | CTCAGTATATTGTTACTTTT+AGG | - | tig0021518:5118-5137 | Msa1392550:intron | 25.0% |
| !!! | GTATATTGTTACTTTTAGGA+AGG | - | tig0021518:5122-5141 | Msa1392550:intron | 25.0% |
| ! | AGTAAAAGGAATTCGTTATT+AGG | + | tig0021518:5282-5301 | None:intergenic | 25.0% |
| !! | CAAAGTATTCTTCTTGTTTA+AGG | + | tig0021518:5424-5443 | None:intergenic | 25.0% |
| ! | CTTAAACAAGAAGAATACTT+TGG | - | tig0021518:5422-5441 | Msa1392550:intron | 25.0% |
| !!! | GCTATTAAAGTTTTTGAAGA+TGG | - | tig0021518:5962-5981 | Msa1392550:intron | 25.0% |
| ! | AAATAAATATCTTGTGTGCA+GGG | - | tig0021518:6280-6299 | Msa1392550:intron | 25.0% |
| ! | ATTACTCTGTATGTGATATA+TGG | + | tig0021518:6339-6358 | None:intergenic | 25.0% |
| ! | TACAGAGTAATTTCAAAAGA+TGG | - | tig0021518:6348-6367 | Msa1392550:intron | 25.0% |
| ! | CGAAAATTACGCAATATTTA+TGG | - | tig0021518:6437-6456 | Msa1392550:intron | 25.0% |
| !!! | AATTTGTTAATCATATCGCT+TGG | - | tig0021518:6527-6546 | Msa1392550:intron | 25.0% |
| ! | TTATGGAATATGAAGCAATT+TGG | + | tig0021518:6712-6731 | None:intergenic | 25.0% |
| ! | AATTGCTTCATATTCCATAA+TGG | - | tig0021518:6712-6731 | Msa1392550:intron | 25.0% |
| ! | AATTTGAATGAAATCTTTCC+AGG | - | tig0021518:7082-7101 | Msa1392550:intron | 25.0% |
| !! | CATTTTCTATAGATTTTCCT+AGG | - | tig0021518:7160-7179 | Msa1392550:intron | 25.0% |
| !! | AAATACATGTTATGGACTTT+TGG | + | tig0021518:7322-7341 | None:intergenic | 25.0% |
| !! | TTTGCTATATTCATTTCATC+AGG | - | tig0021518:7340-7359 | Msa1392550:intron | 25.0% |
| ! | TTGTACATGATGAAAATACT+AGG | - | tig0021518:7586-7605 | Msa1392550:intron | 25.0% |
| ! | AGTCAGAAATATAGAGAATT+TGG | + | tig0021518:7614-7633 | None:intergenic | 25.0% |
| ! | AGTTTAAACAATAATACCAC+AGG | - | tig0021518:7684-7703 | Msa1392550:intron | 25.0% |
| ! | AACATAGTATAAATGAGCAA+AGG | + | tig0021518:7874-7893 | None:intergenic | 25.0% |
| ! | TTTAGATTGAATGAAAGAGA+AGG | - | tig0021518:7892-7911 | Msa1392550:intron | 25.0% |
| ! | GAAAAGAAAAAGAAAGAAGA+CGG | + | tig0021518:8010-8029 | None:intergenic | 25.0% |
| !!! | TTCATATTTTGGTGTTGAAA+TGG | + | tig0021518:8032-8051 | None:intergenic | 25.0% |
| ! | ATGCATGTTTATTATTGAGT+TGG | - | tig0021518:8059-8078 | Msa1392550:intron | 25.0% |
| ! | CTGTCAACATAATTATAGTT+TGG | + | tig0021518:8428-8447 | None:intergenic | 25.0% |
| GTATATAAGAGTAAGGTATG+GGG | - | tig0021518:667-686 | Msa1392550:three_prime_UTR | 30.0% | |
| ATAGATGATGTGTACATGTA+TGG | + | tig0021518:846-865 | None:intergenic | 30.0% | |
| !! | TCAATTGTGCATTGATTTGT+TGG | + | tig0021518:1245-1264 | None:intergenic | 30.0% |
| AAAATAGTTGGGAACTGATT+TGG | + | tig0021518:1325-1344 | None:intergenic | 30.0% | |
| ! | CTTCAATTACAACTCTGAAA+TGG | + | tig0021518:1460-1479 | None:intergenic | 30.0% |
| AGAAGTTTGAAAAAATGAGC+CGG | + | tig0021518:1625-1644 | None:intergenic | 30.0% | |
| !! | GTAGTAGTTGATATTTTGAG+TGG | - | tig0021518:1654-1673 | Msa1392550:CDS | 30.0% |
| TTGAGTGGAAATATTCTAGA+AGG | - | tig0021518:1669-1688 | Msa1392550:CDS | 30.0% | |
| TTGATATACCACTACAGTTT+AGG | - | tig0021518:1771-1790 | Msa1392550:CDS | 30.0% | |
| ! | ATTTAAGACCTAAACTGTAG+TGG | + | tig0021518:1782-1801 | None:intergenic | 30.0% |
| GATATATGACAGAAAGGAAT+AGG | + | tig0021518:1974-1993 | None:intergenic | 30.0% | |
| !! | GATCAATTTTGACCAAGTTT+AGG | - | tig0021518:2145-2164 | Msa1392550:intron | 30.0% |
| !! | GTTGATTTGACTTAGATCAT+TGG | - | tig0021518:2238-2257 | Msa1392550:CDS | 30.0% |
| AGATTTGAACGTATAAGAGA+TGG | + | tig0021518:2299-2318 | None:intergenic | 30.0% | |
| !!! | GTGTTTTTGGATAGATTTAG+CGG | + | tig0021518:2349-2368 | None:intergenic | 30.0% |
| !! | TAGAATTGAACAAGTTGATC+CGG | - | tig0021518:2476-2495 | Msa1392550:CDS | 30.0% |
| AAATATAGGCTGAGTTAGTT+TGG | - | tig0021518:2529-2548 | Msa1392550:CDS | 30.0% | |
| ATATTATAGTCTATGAAGCC+CGG | - | tig0021518:2587-2606 | Msa1392550:intron | 30.0% | |
| TTAAAATTCAGGATACGACA+CGG | - | tig0021518:2666-2685 | Msa1392550:intron | 30.0% | |
| ! | AATTGATTCCAATACTCTGT+AGG | - | tig0021518:3187-3206 | Msa1392550:intron | 30.0% |
| ! | GAAGTTCAGATACTCTAAAA+TGG | + | tig0021518:3277-3296 | None:intergenic | 30.0% |
| GAGACAAAAACAAAGTCAAA+TGG | - | tig0021518:3604-3623 | Msa1392550:intron | 30.0% | |
| TCAAATGGGTAGTTAGATAT+AGG | - | tig0021518:3619-3638 | Msa1392550:intron | 30.0% | |
| CATGAATTTGTAGGTAAACA+AGG | - | tig0021518:4087-4106 | Msa1392550:intron | 30.0% | |
| ! | GTGTAGTTTTTGTTCACTAA+CGG | + | tig0021518:4184-4203 | None:intergenic | 30.0% |
| GGTTTGATCTTTACACAAAT+AGG | + | tig0021518:4454-4473 | None:intergenic | 30.0% | |
| ! | TTTGAACTGAAACCTTTTCT+TGG | + | tig0021518:4517-4536 | None:intergenic | 30.0% |
| !! | TTCAAAAGCTGTTGATTTGT+TGG | - | tig0021518:4531-4550 | Msa1392550:CDS | 30.0% |
| TTAACAGGAAGATCCTTAAT+AGG | + | tig0021518:4646-4665 | None:intergenic | 30.0% | |
| ATTAAGGATCTTCCTGTTAA+AGG | - | tig0021518:4646-4665 | Msa1392550:CDS | 30.0% | |
| AGATGTTCAAATATATACCG+TGG | - | tig0021518:4758-4777 | Msa1392550:CDS | 30.0% | |
| TGTTTACCTGTAATACAATC+TGG | - | tig0021518:4829-4848 | Msa1392550:intron | 30.0% | |
| ATACTGAGAAGCAATACATA+TGG | + | tig0021518:5106-5125 | None:intergenic | 30.0% | |
| !!! | TTGTTACTTTTAGGAAGGTT+TGG | - | tig0021518:5127-5146 | Msa1392550:intron | 30.0% |
| ! | GTTTGGTATTCAAGTTTATC+TGG | - | tig0021518:5144-5163 | Msa1392550:intron | 30.0% |
| TATTAACAGAAGGTTGCATT+TGG | - | tig0021518:5313-5332 | Msa1392550:intron | 30.0% | |
| ATGAATTGCAGAATGATTCA+TGG | - | tig0021518:5341-5360 | Msa1392550:intron | 30.0% | |
| AAACAAGAAGAATACTTTGG+AGG | - | tig0021518:5425-5444 | Msa1392550:intron | 30.0% | |
| ! | TTTTTCTCTCAACGTTTGTA+TGG | + | tig0021518:5588-5607 | None:intergenic | 30.0% |
| !! | AGAAACGAAAAGTACTAACA+TGG | + | tig0021518:5801-5820 | None:intergenic | 30.0% |
| ACTTTGTTCTATTTAGTCCA+CGG | + | tig0021518:5839-5858 | None:intergenic | 30.0% | |
| ACTAGATTATGACAAGAGAT+TGG | - | tig0021518:6006-6025 | Msa1392550:intron | 30.0% | |
| TTGGATGAGAAGTGAAATAA+TGG | + | tig0021518:6033-6052 | None:intergenic | 30.0% | |
| ! | CCAGTATAAGGATCAATTTT+TGG | + | tig0021518:6052-6071 | None:intergenic | 30.0% |
| CCAAAAATTGATCCTTATAC+TGG | - | tig0021518:6049-6068 | Msa1392550:intron | 30.0% | |
| !! | ATGATGGATTTACCAGTATA+AGG | + | tig0021518:6064-6083 | None:intergenic | 30.0% |
| AATCACTTATGTGAAGATGA+TGG | + | tig0021518:6080-6099 | None:intergenic | 30.0% | |
| !! | GATTAAGTTGACTGATTGAA+TGG | - | tig0021518:6096-6115 | Msa1392550:intron | 30.0% |
| CAAATAAATATCTTGTGTGC+AGG | - | tig0021518:6279-6298 | Msa1392550:intron | 30.0% | |
| AATAAATATCTTGTGTGCAG+GGG | - | tig0021518:6281-6300 | Msa1392550:intron | 30.0% | |
| TCTGATATTGTAATTGGAAC+AGG | + | tig0021518:6387-6406 | None:intergenic | 30.0% | |
| ATGGGATCTGATATTGTAAT+TGG | + | tig0021518:6393-6412 | None:intergenic | 30.0% | |
| ! | TATTGCGTAATTTTCGGTTA+TGG | + | tig0021518:6433-6452 | None:intergenic | 30.0% |
| TTATCATCTTTAGCATATCG+AGG | + | tig0021518:6667-6686 | None:intergenic | 30.0% | |
| AAGATGATAAGCTCATAAGA+TGG | - | tig0021518:6677-6696 | Msa1392550:intron | 30.0% | |
| AGCAAATAAACACACCATTA+TGG | + | tig0021518:6729-6748 | None:intergenic | 30.0% | |
| !!! | TTTTTTCACTAGCTAATGCT+TGG | - | tig0021518:6872-6891 | Msa1392550:intron | 30.0% |
| ! | TTTTTCACTAGCTAATGCTT+GGG | - | tig0021518:6873-6892 | Msa1392550:intron | 30.0% |
| ATGAGGTTTAACATGAAAAC+CGG | - | tig0021518:7111-7130 | Msa1392550:intron | 30.0% | |
| !! | TTTCTTTTGAGAAGCTTTAC+CGG | + | tig0021518:7133-7152 | None:intergenic | 30.0% |
| AGCTTCTCAAAAGAAACTAT+CGG | - | tig0021518:7137-7156 | Msa1392550:intron | 30.0% | |
| ! | AGGAAACAGAAGTATGTATA+TGG | - | tig0021518:7360-7379 | Msa1392550:intron | 30.0% |
| AGTTGTAATGCTGTCTAATA+TGG | + | tig0021518:7388-7407 | None:intergenic | 30.0% | |
| ATATTAGACAGCATTACAAC+TGG | - | tig0021518:7387-7406 | Msa1392550:intron | 30.0% | |
| TATTAGACAGCATTACAACT+GGG | - | tig0021518:7388-7407 | Msa1392550:intron | 30.0% | |
| TGTTTAAACTCACTCTGTTA+GGG | + | tig0021518:7674-7693 | None:intergenic | 30.0% | |
| TTGTTTAAACTCACTCTGTT+AGG | + | tig0021518:7675-7694 | None:intergenic | 30.0% | |
| ATTGAATGAAAGAGAAGGAA+CGG | - | tig0021518:7897-7916 | Msa1392550:intron | 30.0% | |
| TTGTTTAACATAGAACGGAA+AGG | - | tig0021518:7945-7964 | Msa1392550:intron | 30.0% | |
| CAACACCAAAATATGAACAA+TGG | - | tig0021518:8035-8054 | Msa1392550:intron | 30.0% | |
| ! | GCATTCCATTGTTCATATTT+TGG | + | tig0021518:8043-8062 | None:intergenic | 30.0% |
| GAACAGAATAAACTATACTC+AGG | + | tig0021518:8237-8256 | None:intergenic | 30.0% | |
| ATCTGTTTACACATCTTTGT+AGG | - | tig0021518:8471-8490 | Msa1392550:intron | 30.0% | |
| CGGGTAAGTATATAAGAGTA+AGG | - | tig0021518:660-679 | Msa1392550:three_prime_UTR | 35.0% | |
| TGCCATACCTAATCATGAAT+TGG | - | tig0021518:726-745 | Msa1392550:CDS | 35.0% | |
| GTCCAATTCATGATTAGGTA+TGG | + | tig0021518:731-750 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGAGGTGTTGGGT+TGG | + | tig0021518:913-932 | None:intergenic | 35.0% |
| !! | TGTTTGGTGCTTATAGAGAA+GGG | + | tig0021518:1061-1080 | None:intergenic | 35.0% |
| !! | ATGTTTGGTGCTTATAGAGA+AGG | + | tig0021518:1062-1081 | None:intergenic | 35.0% |
| !! | TTTTATTAGAGCATCCGCAA+TGG | + | tig0021518:1142-1161 | None:intergenic | 35.0% |
| !! | TTGATTTGTTGGTCCGTTTA+TGG | + | tig0021518:1234-1253 | None:intergenic | 35.0% |
| TGTATTATTGCTGCAGAAGT+TGG | + | tig0021518:1565-1584 | None:intergenic | 35.0% | |
| TTCTATTCTAGATAGCCTTC+AGG | - | tig0021518:1716-1735 | Msa1392550:CDS | 35.0% | |
| ATACACAATTGATCTCCTGA+AGG | + | tig0021518:1734-1753 | None:intergenic | 35.0% | |
| !!! | CTTATCTTATTTTTCGACCC+TGG | - | tig0021518:2020-2039 | Msa1392550:CDS | 35.0% |
| ! | ATTTGTTAGGTTTGGGTAGT+AGG | + | tig0021518:2455-2474 | None:intergenic | 35.0% |
| !! | AGAATTGAACAAGTTGATCC+GGG | - | tig0021518:2477-2496 | Msa1392550:CDS | 35.0% |
| ! | GTTTAACTTAAGATCTGACC+CGG | + | tig0021518:2498-2517 | None:intergenic | 35.0% |
| TACGATACGATATAAGTACG+CGG | - | tig0021518:2630-2649 | Msa1392550:intron | 35.0% | |
| TACTTCACATAGACGTATCT+TGG | + | tig0021518:3105-3124 | None:intergenic | 35.0% | |
| AATACGTACCTACAGAGTAT+TGG | + | tig0021518:3198-3217 | None:intergenic | 35.0% | |
| AAATGGAGATGTATCCGTAT+TGG | + | tig0021518:3260-3279 | None:intergenic | 35.0% | |
| AATGTGAAAAAAGCAAAGGG+AGG | + | tig0021518:3391-3410 | None:intergenic | 35.0% | |
| TGGGTAGTTAGATATAGGAA+CGG | - | tig0021518:3624-3643 | Msa1392550:intron | 35.0% | |
| TAGTTAGATATAGGAACGGA+GGG | - | tig0021518:3628-3647 | Msa1392550:intron | 35.0% | |
| TTATTAAATGCCCAAGTTGC+CGG | - | tig0021518:3683-3702 | Msa1392550:intron | 35.0% | |
| ATTACGATAACAGACTCATG+AGG | - | tig0021518:4128-4147 | Msa1392550:intron | 35.0% | |
| ! | ACTCATGAGGTAATTTTGCT+TGG | - | tig0021518:4141-4160 | Msa1392550:intron | 35.0% |
| ! | ATCAAACCATTTTCACTCAG+AGG | - | tig0021518:4466-4485 | Msa1392550:intron | 35.0% |
| ! | CTGAAACCTTTTCTTGGTTT+TGG | + | tig0021518:4511-4530 | None:intergenic | 35.0% |
| ATTCTTCACTTTGTCATCAC+TGG | - | tig0021518:4581-4600 | Msa1392550:CDS | 35.0% | |
| AAACACAAACAATGCTTCCA+CGG | + | tig0021518:4778-4797 | None:intergenic | 35.0% | |
| CTAATGCCAGATTGTATTAC+AGG | + | tig0021518:4838-4857 | None:intergenic | 35.0% | |
| TCTGGCATTAGAACAATATC+AGG | - | tig0021518:4847-4866 | Msa1392550:intron | 35.0% | |
| AATGGTTAGTGATGAGTGAT+AGG | + | tig0021518:4874-4893 | None:intergenic | 35.0% | |
| !! | AACCATTTGAAGTCTTTTGC+AGG | - | tig0021518:4887-4906 | Msa1392550:intron | 35.0% |
| ATCCTGCAAAAGACTTCAAA+TGG | + | tig0021518:4892-4911 | None:intergenic | 35.0% | |
| !! | CTTTCCATTTCTATTTCTGC+AGG | - | tig0021518:5179-5198 | Msa1392550:intron | 35.0% |
| CAAACCTGCAGAAATAGAAA+TGG | + | tig0021518:5186-5205 | None:intergenic | 35.0% | |
| !! | TTCTATTTCTGCAGGTTTGA+TGG | - | tig0021518:5187-5206 | Msa1392550:intron | 35.0% |
| TGGAGGCTGTAAATTTATGA+AGG | - | tig0021518:5442-5461 | Msa1392550:intron | 35.0% | |
| !!! | CTTGCATGTCATTTTCAGAT+TGG | - | tig0021518:5527-5546 | Msa1392550:intron | 35.0% |
| ! | TTTTCAGATTGGAGATGTCA+AGG | - | tig0021518:5538-5557 | Msa1392550:intron | 35.0% |
| TTTCAGATTGGAGATGTCAA+GGG | - | tig0021518:5539-5558 | Msa1392550:intron | 35.0% | |
| CTAGATGTTTCTTATGGAAC+TGG | - | tig0021518:5617-5636 | Msa1392550:intron | 35.0% | |
| TGTCCAATTTCAGCTAATAC+AGG | - | tig0021518:5726-5745 | Msa1392550:intron | 35.0% | |
| AGACCTGTATTAGCTGAAAT+TGG | + | tig0021518:5732-5751 | None:intergenic | 35.0% | |
| ! | ACAGGTCTTGTATATCACAA+TGG | - | tig0021518:5744-5763 | Msa1392550:intron | 35.0% |
| ! | CAGGTCTTGTATATCACAAT+GGG | - | tig0021518:5745-5764 | Msa1392550:intron | 35.0% |
| ! | GTGGACTAAATAGAACAAAG+TGG | - | tig0021518:5838-5857 | Msa1392550:intron | 35.0% |
| ! | GATGGTAATTTGCATACACT+TGG | - | tig0021518:5980-5999 | Msa1392550:intron | 35.0% |
| ACTCTGTATGTGATATATGG+CGG | + | tig0021518:6336-6355 | None:intergenic | 35.0% | |
| TACAATATCAGATCCCATCA+TGG | - | tig0021518:6395-6414 | Msa1392550:intron | 35.0% | |
| AGAAAAACTTGCCATACCTT+TGG | + | tig0021518:6483-6502 | None:intergenic | 35.0% | |
| TTGTTAATCATATCGCTTGG+TGG | - | tig0021518:6530-6549 | Msa1392550:intron | 35.0% | |
| TGTTAATCATTCCACTTTGC+AGG | - | tig0021518:6573-6592 | Msa1392550:intron | 35.0% | |
| ATCTTTCCAGGTATGAAATG+AGG | - | tig0021518:7094-7113 | Msa1392550:intron | 35.0% | |
| GTTAAACCTCATTTCATACC+TGG | + | tig0021518:7103-7122 | None:intergenic | 35.0% | |
| TGTTCATGGTATCTATGACT+TGG | - | tig0021518:7476-7495 | Msa1392550:intron | 35.0% | |
| GTTCATGGTATCTATGACTT+GGG | - | tig0021518:7477-7496 | Msa1392550:intron | 35.0% | |
| TCCATCATCTTCTTCAGAAT+CGG | + | tig0021518:7553-7572 | None:intergenic | 35.0% | |
| AAACCATATGGAACTCTTTG+AGG | + | tig0021518:7776-7795 | None:intergenic | 35.0% | |
| ! | AAGAAGGCATGAAAACCATA+TGG | + | tig0021518:7788-7807 | None:intergenic | 35.0% |
| AATGAGCAAAGGAAAAAGAG+AGG | + | tig0021518:7863-7882 | None:intergenic | 35.0% | |
| !!! | GACGGAGTTTTAGATTGAAT+GGG | + | tig0021518:7992-8011 | None:intergenic | 35.0% |
| !!! | AGACGGAGTTTTAGATTGAA+TGG | + | tig0021518:7993-8012 | None:intergenic | 35.0% |
| !! | CATTGTGCATTTTCAGGATA+GGG | + | tig0021518:8114-8133 | None:intergenic | 35.0% |
| !! | ACATTGTGCATTTTCAGGAT+AGG | + | tig0021518:8115-8134 | None:intergenic | 35.0% |
| ATCCTGAAAATGCACAATGT+AGG | - | tig0021518:8115-8134 | Msa1392550:intron | 35.0% | |
| AAAGGGTGGAAAACAAAAAG+GGG | + | tig0021518:8333-8352 | None:intergenic | 35.0% | |
| GAAAGGGTGGAAAACAAAAA+GGG | + | tig0021518:8334-8353 | None:intergenic | 35.0% | |
| GCACTTGAACAAAAAGGAAA+GGG | + | tig0021518:8350-8369 | None:intergenic | 35.0% | |
| TGCACTTGAACAAAAAGGAA+AGG | + | tig0021518:8351-8370 | None:intergenic | 35.0% | |
| CAGAATGCACTTGAACAAAA+AGG | + | tig0021518:8356-8375 | None:intergenic | 35.0% | |
| CTCAAGTAGATAACATCGTA+TGG | - | tig0021518:8557-8576 | Msa1392550:CDS | 35.0% | |
| TTACTCTATCCATATCCAGC+GGG | + | tig0021518:640-659 | None:intergenic | 40.0% | |
| GTTACTCTATCCATATCCAG+CGG | + | tig0021518:641-660 | None:intergenic | 40.0% | |
| GCTGGATATGGATAGAGTAA+CGG | - | tig0021518:640-659 | Msa1392550:three_prime_UTR | 40.0% | |
| CTGGATATGGATAGAGTAAC+GGG | - | tig0021518:641-660 | Msa1392550:three_prime_UTR | 40.0% | |
| ATAAGAGTAAGGTATGGGGA+CGG | - | tig0021518:671-690 | Msa1392550:three_prime_UTR | 40.0% | |
| CATGATTAGGTATGGCAATG+AGG | + | tig0021518:723-742 | None:intergenic | 40.0% | |
| !! | ACAAACAGAGCACTCCATTT+TGG | - | tig0021518:807-826 | Msa1392550:intron | 40.0% |
| !! | CAAACAGAGCACTCCATTTT+GGG | - | tig0021518:808-827 | Msa1392550:intron | 40.0% |
| !! | TCCATTTTGGGTGCTTAAGT+GGG | - | tig0021518:820-839 | Msa1392550:intron | 40.0% |
| GTGCTTCACCTATTTAGCAT+CGG | + | tig0021518:1116-1135 | None:intergenic | 40.0% | |
| ! | TGGATTGGATTGGGGTTTAA+TGG | + | tig0021518:2197-2216 | None:intergenic | 40.0% |
| ! | GATTGGATTGGATTGGATTG+GGG | + | tig0021518:2205-2224 | None:intergenic | 40.0% |
| ! | GGATTGGATTGGATTGGATT+GGG | + | tig0021518:2206-2225 | None:intergenic | 40.0% |
| ! | TGGATTGGATTGGATTGGAT+TGG | + | tig0021518:2207-2226 | None:intergenic | 40.0% |
| ! | ATCACTGGATTGGATTGGAT+TGG | + | tig0021518:2212-2231 | None:intergenic | 40.0% |
| ! | GCTGAGTTAGTTTGGTTCAA+CGG | - | tig0021518:2537-2556 | Msa1392550:CDS | 40.0% |
| ! | CTGAGTTAGTTTGGTTCAAC+GGG | - | tig0021518:2538-2557 | Msa1392550:CDS | 40.0% |
| GAAAGTAACGAGAGAGACAA+AGG | + | tig0021518:2951-2970 | None:intergenic | 40.0% | |
| GTAGTTAGATATAGGAACGG+AGG | - | tig0021518:3627-3646 | Msa1392550:intron | 40.0% | |
| TGTGTACACCGAGAGTTTAA+TGG | - | tig0021518:4298-4317 | Msa1392550:intron | 40.0% | |
| ACTTGAAGACTTGTGTACCA+CGG | + | tig0021518:4402-4421 | None:intergenic | 40.0% | |
| ! | AAACCATTTTCACTCAGAGG+AGG | - | tig0021518:4469-4488 | Msa1392550:intron | 40.0% |
| ! | AACCATTTTCACTCAGAGGA+GGG | - | tig0021518:4470-4489 | Msa1392550:intron | 40.0% |
| GTGGAACCAAAACCAAGAAA+AGG | - | tig0021518:4502-4521 | Msa1392550:CDS | 40.0% | |
| AGATGAGACACCTCCTATTA+AGG | - | tig0021518:4630-4649 | Msa1392550:CDS | 40.0% | |
| ACAGGAAGATCCTTAATAGG+AGG | + | tig0021518:4643-4662 | None:intergenic | 40.0% | |
| CAACCACTTATGTCACTAAC+CGG | + | tig0021518:4679-4698 | None:intergenic | 40.0% | |
| GTGTCGCAACTCATTAATCA+CGG | - | tig0021518:4730-4749 | Msa1392550:CDS | 40.0% | |
| ! | CTTTTGCAGGATTGCTTGAA+TGG | - | tig0021518:4900-4919 | Msa1392550:intron | 40.0% |
| CTTGAATGGAGAGTTTGTCA+GGG | - | tig0021518:4914-4933 | Msa1392550:intron | 40.0% | |
| TTACCAATGATATCCAGCGA+CGG | + | tig0021518:4964-4983 | None:intergenic | 40.0% | |
| ATGAGAACTTGCACAGATCT+AGG | - | tig0021518:5042-5061 | Msa1392550:intron | 40.0% | |
| GTTTCTTATGGAACTGGAAC+AGG | - | tig0021518:5623-5642 | Msa1392550:intron | 40.0% | |
| ! | CTGTTATATCTGAAATGCCG+TGG | - | tig0021518:5819-5838 | Msa1392550:intron | 40.0% |
| ! | CTTGAGTTGTATAGCAGAAG+TGG | + | tig0021518:5917-5936 | None:intergenic | 40.0% |
| ATGACATCAACCTGAAGTGT+CGG | + | tig0021518:6139-6158 | None:intergenic | 40.0% | |
| GCAGGGGAAATGTTTACATT+TGG | - | tig0021518:6297-6316 | Msa1392550:intron | 40.0% | |
| GCAAAATCATGCACCATGAT+GGG | + | tig0021518:6411-6430 | None:intergenic | 40.0% | |
| TGGATCTTCCTGTGTACTTT+AGG | - | tig0021518:6457-6476 | Msa1392550:intron | 40.0% | |
| TGTACTTTAGGCCAAAGGTA+TGG | - | tig0021518:6469-6488 | Msa1392550:intron | 40.0% | |
| ! | ATCGCTTGGTGGAAATCAAA+TGG | - | tig0021518:6541-6560 | Msa1392550:intron | 40.0% |
| TCATTCCACTTTGCAGGAAA+TGG | - | tig0021518:6579-6598 | Msa1392550:intron | 40.0% | |
| ! | TCAACCAAGAAAGCTCGTTT+TGG | - | tig0021518:6634-6653 | Msa1392550:intron | 40.0% |
| CATCTTTAGCATATCGAGGT+AGG | + | tig0021518:6663-6682 | None:intergenic | 40.0% | |
| CCAAGTCTAGATTCTTCAGT+CGG | + | tig0021518:6930-6949 | None:intergenic | 40.0% | |
| GAAGAATCTAGACTTGGACA+TGG | - | tig0021518:6933-6952 | Msa1392550:intron | 40.0% | |
| GTGTATCTTTCATTCACCCT+AGG | + | tig0021518:7180-7199 | None:intergenic | 40.0% | |
| AGGGTGAATGAAAGATACAC+CGG | - | tig0021518:7180-7199 | Msa1392550:intron | 40.0% | |
| TTGAGTGCCAAACCTGATTT+CGG | - | tig0021518:7426-7445 | Msa1392550:intron | 40.0% | |
| AAAACCAAGCTTGAAGTTGG+AGG | - | tig0021518:7450-7469 | Msa1392550:intron | 40.0% | |
| ATTTCCTCCAACTTCAAGCT+TGG | + | tig0021518:7457-7476 | None:intergenic | 40.0% | |
| GAAGTTGGAGGAAATGTTCA+TGG | - | tig0021518:7462-7481 | Msa1392550:intron | 40.0% | |
| ! | CTTCTTCAGAATCGGTTTCT+GGG | + | tig0021518:7545-7564 | None:intergenic | 40.0% |
| ! | TCTTCTTCAGAATCGGTTTC+TGG | + | tig0021518:7546-7565 | None:intergenic | 40.0% |
| ! | ACCGATTCTGAAGAAGATGA+TGG | - | tig0021518:7549-7568 | Msa1392550:intron | 40.0% |
| TTGCCTCAAAGAGTTCCATA+TGG | - | tig0021518:7770-7789 | Msa1392550:intron | 40.0% | |
| ACAAACCTCTGTCAGAAAGA+AGG | + | tig0021518:7804-7823 | None:intergenic | 40.0% | |
| GAGAAGGAACGGATCATTAA+AGG | - | tig0021518:7908-7927 | Msa1392550:intron | 40.0% | |
| !! | TATTGAGTTGGTCACTTGAC+TGG | - | tig0021518:8071-8090 | Msa1392550:intron | 40.0% |
| GGAAAGGGTGGAAAACAAAA+AGG | + | tig0021518:8335-8354 | None:intergenic | 40.0% | |
| CTTGAACAAAAAGGAAAGGG+TGG | + | tig0021518:8347-8366 | None:intergenic | 40.0% | |
| TTCTTCATGACTCTCTTCAC+AGG | - | tig0021518:8384-8403 | Msa1392550:intron | 40.0% | |
| TACTCTATCCATATCCAGCG+GGG | + | tig0021518:639-658 | None:intergenic | 45.0% | |
| ATTAGGTATGGCAATGAGGC+GGG | + | tig0021518:719-738 | None:intergenic | 45.0% | |
| GATTAGGTATGGCAATGAGG+CGG | + | tig0021518:720-739 | None:intergenic | 45.0% | |
| ! | TGGAGTGCTCTGTTTGTAGA+TGG | + | tig0021518:804-823 | None:intergenic | 45.0% |
| !! | CTCCATTTTGGGTGCTTAAG+TGG | - | tig0021518:819-838 | Msa1392550:intron | 45.0% |
| !! | GGTGTTGGGTTGGAAAGATT+GGG | + | tig0021518:903-922 | None:intergenic | 45.0% |
| !! | AGGTGTTGGGTTGGAAAGAT+TGG | + | tig0021518:904-923 | None:intergenic | 45.0% |
| ! | TTGGTGCTTATAGAGAAGGG+TGG | + | tig0021518:1058-1077 | None:intergenic | 45.0% |
| ! | ATTAGAGCATCCGCAATGGT+GGG | + | tig0021518:1138-1157 | None:intergenic | 45.0% |
| ! | TATTAGAGCATCCGCAATGG+TGG | + | tig0021518:1139-1158 | None:intergenic | 45.0% |
| CAAATCAACTCGCTCATCAC+TGG | + | tig0021518:2227-2246 | None:intergenic | 45.0% | |
| GCAAAGGGAGGTTACGTTAA+GGG | + | tig0021518:3379-3398 | None:intergenic | 45.0% | |
| AGCAAAGGGAGGTTACGTTA+AGG | + | tig0021518:3380-3399 | None:intergenic | 45.0% | |
| ATCTTCAACACCGGCAACTT+GGG | + | tig0021518:3696-3715 | None:intergenic | 45.0% | |
| TATCTTCAACACCGGCAACT+TGG | + | tig0021518:3697-3716 | None:intergenic | 45.0% | |
| ! | AGCTGGTCTATCTTCAACAC+CGG | + | tig0021518:3705-3724 | None:intergenic | 45.0% |
| GTGTTGAAGATAGACCAGCT+AGG | - | tig0021518:3705-3724 | Msa1392550:CDS | 45.0% | |
| !! | AGTGTCGTTTAATGCCTAGC+TGG | + | tig0021518:3722-3741 | None:intergenic | 45.0% |
| GCAGTAACATAAGCAGTAGC+AGG | - | tig0021518:4356-4375 | Msa1392550:intron | 45.0% | |
| AACACCTTGAGAAGTTACCG+TGG | - | tig0021518:4382-4401 | Msa1392550:intron | 45.0% | |
| TGTACCACGGTAACTTCTCA+AGG | + | tig0021518:4389-4408 | None:intergenic | 45.0% | |
| ATCCCTCCTCTGAGTGAAAA+TGG | + | tig0021518:4475-4494 | None:intergenic | 45.0% | |
| ! | ACTCAGAGGAGGGATTTTGA+AGG | - | tig0021518:4480-4499 | Msa1392550:CDS | 45.0% |
| CTTTGTCATCACTGGATTGC+TGG | - | tig0021518:4589-4608 | Msa1392550:CDS | 45.0% | |
| TCCTGTTAAAGGACACCTTC+CGG | - | tig0021518:4657-4676 | Msa1392550:CDS | 45.0% | |
| CACTTATGTCACTAACCGGA+AGG | + | tig0021518:4675-4694 | None:intergenic | 45.0% | |
| CTTCCGGTTAGTGACATAAG+TGG | - | tig0021518:4673-4692 | Msa1392550:CDS | 45.0% | |
| GCTTGAATGGAGAGTTTGTC+AGG | - | tig0021518:4913-4932 | Msa1392550:intron | 45.0% | |
| AATGGAGAGTTTGTCAGGGT+GGG | - | tig0021518:4918-4937 | Msa1392550:intron | 45.0% | |
| ACGGGAGAAAACTTCGGATT+TGG | + | tig0021518:4945-4964 | None:intergenic | 45.0% | |
| TACCAATGATATCCAGCGAC+GGG | + | tig0021518:4963-4982 | None:intergenic | 45.0% | |
| TTCTGCAGGTTTGATGGAGA+TGG | - | tig0021518:5193-5212 | Msa1392550:intron | 45.0% | |
| TCTGCAGGTTTGATGGAGAT+GGG | - | tig0021518:5194-5213 | Msa1392550:intron | 45.0% | |
| ! | CATGGTTTGCGCATCAAAGA+TGG | - | tig0021518:5359-5378 | Msa1392550:intron | 45.0% |
| ATATGTAGCTCCGACACTTC+AGG | - | tig0021518:6126-6145 | Msa1392550:intron | 45.0% | |
| GGCAAAATCATGCACCATGA+TGG | + | tig0021518:6412-6431 | None:intergenic | 45.0% | |
| TCCTGTGTACTTTAGGCCAA+AGG | - | tig0021518:6464-6483 | Msa1392550:intron | 45.0% | |
| ACCTTTGGCCTAAAGTACAC+AGG | + | tig0021518:6468-6487 | None:intergenic | 45.0% | |
| CTTCACCATTTCCTGCAAAG+TGG | + | tig0021518:6587-6606 | None:intergenic | 45.0% | |
| GACACCAAAACGAGCTTTCT+TGG | + | tig0021518:6641-6660 | None:intergenic | 45.0% | |
| TTCACTAGCTAATGCTTGGG+AGG | - | tig0021518:6876-6895 | Msa1392550:intron | 45.0% | |
| CCGACTGAAGAATCTAGACT+TGG | - | tig0021518:6927-6946 | Msa1392550:intron | 45.0% | |
| TGAATGAAAGATACACCGGC+AGG | - | tig0021518:7184-7203 | Msa1392550:intron | 45.0% | |
| !! | GGCTGGTTTAAATTACCTGC+CGG | + | tig0021518:7202-7221 | None:intergenic | 45.0% |
| TCGCAGATTGCGCAAAATAG+CGG | + | tig0021518:7223-7242 | None:intergenic | 45.0% | |
| ! | GGTTTTGCCGAAATCAGGTT+TGG | + | tig0021518:7436-7455 | None:intergenic | 45.0% |
| !!! | AGCTTGGTTTTGCCGAAATC+AGG | + | tig0021518:7441-7460 | None:intergenic | 45.0% |
| GGCAAAACCAAGCTTGAAGT+TGG | - | tig0021518:7447-7466 | Msa1392550:intron | 45.0% | |
| CATGTACGAACGATTTCCTG+TGG | + | tig0021518:7703-7722 | None:intergenic | 45.0% | |
| GGCAATTCTACAACTGCAAC+TGG | + | tig0021518:7755-7774 | None:intergenic | 45.0% | |
| TCATGCCTTCTTTCTGACAG+AGG | - | tig0021518:7796-7815 | Msa1392550:intron | 45.0% | |
| ! | GGCCTACATTGTGCATTTTC+AGG | + | tig0021518:8120-8139 | None:intergenic | 45.0% |
| !! | GTTTGGCTTGTTCTTGCAGT+TGG | + | tig0021518:8411-8430 | None:intergenic | 45.0% |
| !!! | ATTTATTAATTTTTTTTTTG+AGG | + | tig0021518:924-943 | None:intergenic | 5.0% |
| ACTCTATCCATATCCAGCGG+GGG | + | tig0021518:638-657 | None:intergenic | 50.0% | |
| TTAGGTATGGCAATGAGGCG+GGG | + | tig0021518:718-737 | None:intergenic | 50.0% | |
| GCCCACTTAAGCACCCAAAA+TGG | + | tig0021518:824-843 | None:intergenic | 50.0% | |
| ! | CGCTCATCACTGGATTGGAT+TGG | + | tig0021518:2217-2236 | None:intergenic | 50.0% |
| CAACTCGCTCATCACTGGAT+TGG | + | tig0021518:2222-2241 | None:intergenic | 50.0% | |
| TGAAGCCCGGATACGTAGTA+CGG | - | tig0021518:2600-2619 | Msa1392550:intron | 50.0% | |
| AGGTTACGTTAAGGGACGGA+GGG | + | tig0021518:3371-3390 | None:intergenic | 50.0% | |
| AGGGAGGTTACGTTAAGGGA+CGG | + | tig0021518:3375-3394 | None:intergenic | 50.0% | |
| GATATAGGAACGGAGGGAGT+AGG | - | tig0021518:3634-3653 | Msa1392550:intron | 50.0% | |
| !! | CAGAGGAGGGATTTTGAAGG+TGG | - | tig0021518:4483-4502 | Msa1392550:CDS | 50.0% |
| !! | GGAGGTGTCTCATCTTTGAC+AGG | + | tig0021518:4625-4644 | None:intergenic | 50.0% |
| !! | ACCGGAAGGTGTCCTTTAAC+AGG | + | tig0021518:4661-4680 | None:intergenic | 50.0% |
| GAATGGAGAGTTTGTCAGGG+TGG | - | tig0021518:4917-4936 | Msa1392550:intron | 50.0% | |
| GGAGATGTCAAGGGTCTACT+TGG | - | tig0021518:5548-5567 | Msa1392550:intron | 50.0% | |
| ACTAGCTAATGCTTGGGAGG+AGG | - | tig0021518:6879-6898 | Msa1392550:intron | 50.0% | |
| AGATTGCGCAAAATAGCGGC+TGG | + | tig0021518:7219-7238 | None:intergenic | 50.0% | |
| GGTGGAAAACAAAAAGGGGC+AGG | + | tig0021518:8329-8348 | None:intergenic | 50.0% | |
| AATTTCATCCCCGTCCCCGA+CGG | + | tig0021518:605-624 | None:intergenic | 55.0% | |
| ATTCGATTTCTCACCCCCGC+TGG | - | tig0021518:622-641 | Msa1392550:three_prime_UTR | 55.0% | |
| TTTCTCACCCCCGCTGGATA+TGG | - | tig0021518:628-647 | Msa1392550:three_prime_UTR | 55.0% | |
| GTAAGGTATGGGGACGGAGA+AGG | - | tig0021518:677-696 | Msa1392550:three_prime_UTR | 55.0% | |
| ! | AGGTGAAGCACCCACCATTG+CGG | - | tig0021518:1125-1144 | Msa1392550:intron | 55.0% |
| GAAGCCCGGATACGTAGTAC+GGG | - | tig0021518:2601-2620 | Msa1392550:intron | 55.0% | |
| CACACCCGTACTACGTATCC+GGG | + | tig0021518:2608-2627 | None:intergenic | 55.0% | |
| CCACACCCGTACTACGTATC+CGG | + | tig0021518:2609-2628 | None:intergenic | 55.0% | |
| CGGATACGTAGTACGGGTGT+GGG | - | tig0021518:2607-2626 | Msa1392550:intron | 55.0% | |
| GAGGTTACGTTAAGGGACGG+AGG | + | tig0021518:3372-3391 | None:intergenic | 55.0% | |
| CCAGCGACGGGAGAAAACTT+CGG | + | tig0021518:4951-4970 | None:intergenic | 55.0% | |
| CTCCCGTCGCTGGATATCAT+TGG | - | tig0021518:4958-4977 | Msa1392550:intron | 55.0% | |
| AGCTAATGCTTGGGAGGAGG+AGG | - | tig0021518:6882-6901 | Msa1392550:intron | 55.0% | |
| AGACTTGGACATGGTCAGCG+AGG | - | tig0021518:6942-6961 | Msa1392550:intron | 55.0% | |
| CATGGTCAGCGAGGATGTCA+AGG | - | tig0021518:6951-6970 | Msa1392550:intron | 55.0% | |
| GGGACGCGTGGGATGTAAAT+AGG | + | tig0021518:7525-7544 | None:intergenic | 55.0% | |
| !! | AATCGGTTTCTGGGACGCGT+GGG | + | tig0021518:7536-7555 | None:intergenic | 55.0% |
| CAGATCGACGCAGCGTTGTA+CGG | + | tig0021518:8456-8475 | None:intergenic | 55.0% | |
| CAGGGATACCCGAAACCCGT+CGG | - | tig0021518:586-605 | Msa1392550:three_prime_UTR | 60.0% | |
| AGGGATACCCGAAACCCGTC+GGG | - | tig0021518:587-606 | Msa1392550:three_prime_UTR | 60.0% | |
| ATTTCATCCCCGTCCCCGAC+GGG | + | tig0021518:604-623 | None:intergenic | 60.0% | |
| TATGGCAATGAGGCGGGGTG+GGG | + | tig0021518:713-732 | None:intergenic | 60.0% | |
| GTATGGCAATGAGGCGGGGT+GGG | + | tig0021518:714-733 | None:intergenic | 60.0% | |
| CCGGATACGTAGTACGGGTG+TGG | - | tig0021518:2606-2625 | Msa1392550:intron | 60.0% | |
| ! | CCGAAGTTTTCTCCCGTCGC+TGG | - | tig0021518:4948-4967 | Msa1392550:intron | 60.0% |
| !! | GAATCGGTTTCTGGGACGCG+TGG | + | tig0021518:7537-7556 | None:intergenic | 60.0% |
| GGGATACCCGAAACCCGTCG+GGG | - | tig0021518:588-607 | Msa1392550:three_prime_UTR | 65.0% | |
| TACCCGAAACCCGTCGGGGA+CGG | - | tig0021518:592-611 | Msa1392550:three_prime_UTR | 65.0% | |
| GGTATGGCAATGAGGCGGGG+TGG | + | tig0021518:715-734 | None:intergenic | 65.0% | |
| ACCCGAAACCCGTCGGGGAC+GGG | - | tig0021518:593-612 | Msa1392550:three_prime_UTR | 70.0% | |
| ! | TCCCCGTCCCCGACGGGTTT+CGG | + | tig0021518:598-617 | None:intergenic | 70.0% |
| CAATGAGGCGGGGTGGGGAC+GGG | + | tig0021518:708-727 | None:intergenic | 70.0% | |
| GCAATGAGGCGGGGTGGGGA+CGG | + | tig0021518:709-728 | None:intergenic | 70.0% | |
| ! | CCCCGTCCCCGACGGGTTTC+GGG | + | tig0021518:597-616 | None:intergenic | 75.0% |
| CCCGAAACCCGTCGGGGACG+GGG | - | tig0021518:594-613 | Msa1392550:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021518 | gene | 575 | 8580 | 575 | ID=Msa1392550;Name=Msa1392550 |
| tig0021518 | mRNA | 575 | 8580 | 575 | ID=Msa1392550-mRNA-1;Parent=Msa1392550;Name=Msa1392550-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.28|0.2|0.86|0.92|0.93|15|145|609 |
| tig0021518 | exon | 575 | 749 | 575 | ID=Msa1392550-mRNA-1:exon:13289;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 1338 | 1449 | 1338 | ID=Msa1392550-mRNA-1:exon:13288;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 1548 | 1793 | 1548 | ID=Msa1392550-mRNA-1:exon:13287;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 1950 | 2051 | 1950 | ID=Msa1392550-mRNA-1:exon:13286;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 2154 | 2271 | 2154 | ID=Msa1392550-mRNA-1:exon:13285;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 2422 | 2560 | 2422 | ID=Msa1392550-mRNA-1:exon:13284;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 2670 | 2854 | 2670 | ID=Msa1392550-mRNA-1:exon:13283;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 3085 | 3195 | 3085 | ID=Msa1392550-mRNA-1:exon:13282;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 3354 | 3416 | 3354 | ID=Msa1392550-mRNA-1:exon:13281;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 3511 | 3610 | 3511 | ID=Msa1392550-mRNA-1:exon:13280;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 3692 | 3803 | 3692 | ID=Msa1392550-mRNA-1:exon:13279;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 3940 | 3954 | 3940 | ID=Msa1392550-mRNA-1:exon:13278;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 4176 | 4246 | 4176 | ID=Msa1392550-mRNA-1:exon:13277;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 4477 | 4795 | 4477 | ID=Msa1392550-mRNA-1:exon:13276;Parent=Msa1392550-mRNA-1 |
| tig0021518 | exon | 8474 | 8580 | 8474 | ID=Msa1392550-mRNA-1:exon:13275;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 8474 | 8580 | 8474 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 4477 | 4795 | 4477 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 4176 | 4246 | 4176 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 3940 | 3954 | 3940 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 3692 | 3803 | 3692 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 3511 | 3610 | 3511 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 3354 | 3416 | 3354 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 3085 | 3195 | 3085 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 2670 | 2854 | 2670 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 2422 | 2560 | 2422 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 2154 | 2271 | 2154 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 1950 | 2051 | 1950 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 1548 | 1793 | 1548 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 1338 | 1449 | 1338 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | CDS | 720 | 749 | 720 | ID=Msa1392550-mRNA-1:cds;Parent=Msa1392550-mRNA-1 |
| tig0021518 | three_prime_UTR | 575 | 719 | 575 | ID=Msa1392550-mRNA-1:three_prime_utr;Parent=Msa1392550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
