Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393510 | KEH28975.1 | 85.714 | 63 | 7 | 1 | 92 | 154 | 1 | 61 | 1.71e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393510 | A0A072USW6 | 85.714 | 63 | 7 | 1 | 92 | 154 | 1 | 61 | 8.16e-28 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1393510 | Msa1426270 | 0.964976 | 5.208189e-124 | -8.615850e-47 |
| Msa0707310 | Msa1393510 | 0.961164 | 2.189927e-119 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393510 | MtrunA17_Chr1g0204831 | 62.791 | 86 | 25 | 3 | 66 | 151 | 348 | 426 | 4.37e-22 | 91.7 |
| Msa1393510 | MtrunA17_Chr1g0166381 | 52.222 | 90 | 34 | 4 | 66 | 154 | 361 | 442 | 1.16e-20 | 87.8 |
| Msa1393510 | MtrunA17_Chr6g0460021 | 85.000 | 40 | 6 | 0 | 123 | 162 | 4 | 43 | 8.39e-19 | 76.3 |
| Msa1393510 | MtrunA17_Chr1g0185201 | 41.379 | 116 | 55 | 5 | 44 | 152 | 355 | 464 | 1.26e-16 | 76.3 |
| Msa1393510 | MtrunA17_Chr4g0001611 | 71.053 | 38 | 11 | 0 | 2 | 39 | 73 | 110 | 5.62e-13 | 63.2 |
| Msa1393510 | MtrunA17_Chr7g0260211 | 40.541 | 111 | 53 | 5 | 49 | 152 | 350 | 454 | 1.20e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393510 | AT4G14740.3 | 46.067 | 89 | 41 | 3 | 66 | 154 | 230 | 311 | 4.13e-18 | 80.1 |
| Msa1393510 | AT4G14740.1 | 45.556 | 90 | 40 | 4 | 66 | 154 | 369 | 450 | 5.27e-18 | 80.5 |
| Msa1393510 | AT4G14740.2 | 45.556 | 90 | 40 | 4 | 66 | 154 | 369 | 450 | 5.27e-18 | 80.5 |
| Msa1393510 | AT3G22810.3 | 48.315 | 89 | 39 | 3 | 66 | 154 | 226 | 307 | 8.78e-17 | 76.6 |
| Msa1393510 | AT3G22810.1 | 47.778 | 90 | 38 | 4 | 66 | 154 | 364 | 445 | 1.75e-16 | 76.3 |
| Msa1393510 | AT5G43870.1 | 52.000 | 75 | 31 | 2 | 66 | 140 | 347 | 416 | 9.28e-16 | 73.9 |
Find 83 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATCATGTTTACAATTT+TGG | 0.081970 | tig0021743:+13652 | None:intergenic |
| TGTACTTGATGCAATTTATT+AGG | 0.125993 | tig0021743:-13762 | Msa1393510:three_prime_UTR |
| AAATAGACATGTTTCGATTC+AGG | 0.231481 | tig0021743:-13819 | Msa1393510:three_prime_UTR |
| GGCTTACCTCTTCTTAATCT+TGG | 0.247982 | tig0021743:-16221 | Msa1393510:CDS |
| TGCAAAGACCTGAGCATTGC+TGG | 0.291496 | tig0021743:-13867 | Msa1393510:three_prime_UTR |
| GTACTTGATGCAATTTATTA+GGG | 0.294884 | tig0021743:-13761 | Msa1393510:three_prime_UTR |
| TCTCACCGCCATCCAGTAAA+TGG | 0.298174 | tig0021743:+15120 | None:intergenic |
| CTCAAGGGTTCTTAGTTTGA+TGG | 0.314676 | tig0021743:-13727 | Msa1393510:three_prime_UTR |
| CAGAAGATACAATAATCTTC+TGG | 0.338208 | tig0021743:+13888 | None:intergenic |
| GTGAGGAGGAATGAGGAAAC+AGG | 0.345932 | tig0021743:+15485 | None:intergenic |
| AGCTAGCTGCTCTTAATAAA+AGG | 0.348208 | tig0021743:-15551 | Msa1393510:CDS |
| ACAAAGGAATGACAAAATAT+TGG | 0.354391 | tig0021743:+14632 | None:intergenic |
| TCTCTTCCTTTGCACACATC+TGG | 0.358215 | tig0021743:+17832 | None:intergenic |
| ATTTGAGAGTTCCTCCTTCA+AGG | 0.376894 | tig0021743:-16174 | Msa1393510:intron |
| TTGGACGGGACGCCATTTAC+TGG | 0.382972 | tig0021743:-15132 | Msa1393510:CDS |
| TAATATGAAGCTTAAACTTA+AGG | 0.384161 | tig0021743:-18063 | Msa1393510:intron |
| CCTGATCACATTACTACATT+AGG | 0.386162 | tig0021743:-13790 | Msa1393510:three_prime_UTR |
| TATTTGAAGATTCTTATTAG+AGG | 0.394428 | tig0021743:-13929 | Msa1393510:three_prime_UTR |
| ATCGAGTTGGTAAGTTGTAT+TGG | 0.419679 | tig0021743:-15515 | Msa1393510:CDS |
| CACATAGGTAGCGGTCATAT+TGG | 0.420446 | tig0021743:-14789 | Msa1393510:CDS |
| TTGCAGATTGCAGTAAAGTC+TGG | 0.436893 | tig0021743:-13953 | Msa1393510:intron |
| TCAAGGGTTCTTAGTTTGAT+GGG | 0.437468 | tig0021743:-13726 | Msa1393510:three_prime_UTR |
| TATTTGACAATGTTTGTTCA+AGG | 0.441377 | tig0021743:-14595 | Msa1393510:intron |
| ATGAAGAGTAGGCACATTGC+TGG | 0.442785 | tig0021743:-15371 | Msa1393510:CDS |
| AGGTCGGATGAGAGAAGAGA+AGG | 0.445413 | tig0021743:+18110 | None:intergenic |
| AATAGACATGTTTCGATTCA+GGG | 0.449064 | tig0021743:-13818 | Msa1393510:three_prime_UTR |
| GGTCGGATGAGAGAAGAGAA+GGG | 0.449715 | tig0021743:+18111 | None:intergenic |
| TCCTCACCTTCAGTATGATA+AGG | 0.481722 | tig0021743:-15469 | Msa1393510:intron |
| CAAAGATATGCCCGCTTGGA+CGG | 0.486154 | tig0021743:-15147 | Msa1393510:CDS |
| GGAACTCTCAAATATGTGAT+TGG | 0.492673 | tig0021743:+16184 | None:intergenic |
| AATTTCCTTTAACAGAAAAG+AGG | 0.495172 | tig0021743:-14243 | Msa1393510:intron |
| CTGAGACTTGTGTGCGGCAA+TGG | 0.496640 | tig0021743:-13680 | Msa1393510:three_prime_UTR |
| GAGAGAAGAAAGGAAGAGGT+CGG | 0.499165 | tig0021743:+18094 | None:intergenic |
| GGTGAGAATAGTCGCTACTT+TGG | 0.499376 | tig0021743:-15104 | Msa1393510:CDS |
| AAAAGAGGTCACCGTGGGAG+CGG | 0.503931 | tig0021743:-14228 | Msa1393510:three_prime_UTR |
| AAAGATATGCCCGCTTGGAC+GGG | 0.506528 | tig0021743:-15146 | Msa1393510:CDS |
| AATTTAAGCCAGCAATGCTC+AGG | 0.508204 | tig0021743:+13859 | None:intergenic |
| GATTGAGAGAAGAAAGGAAG+AGG | 0.512181 | tig0021743:+18090 | None:intergenic |
| TTCCTTTGCACACATCTGGA+TGG | 0.515608 | tig0021743:+17836 | None:intergenic |
| TAATGTGATTGAGAGAAGAA+AGG | 0.522994 | tig0021743:+18084 | None:intergenic |
| ACCTCTTCTTAATCTTGGTG+TGG | 0.526438 | tig0021743:-16216 | Msa1393510:CDS |
| CTCTATCAGATCATGACTGA+TGG | 0.527988 | tig0021743:-14199 | Msa1393510:three_prime_UTR |
| GTGTGCAAAGGAAGAGATTG+TGG | 0.529500 | tig0021743:-17826 | Msa1393510:CDS |
| CCTAATGTAGTAATGTGATC+AGG | 0.535415 | tig0021743:+13790 | None:intergenic |
| CTCATCTGCCCTCTGATCAA+AGG | 0.538021 | tig0021743:+15068 | None:intergenic |
| TCTGCCCTCTGATCAAAGGT+TGG | 0.539925 | tig0021743:+15072 | None:intergenic |
| CTTTGATCAGAGGGCAGATG+AGG | 0.544340 | tig0021743:-15067 | Msa1393510:CDS |
| AAATGGCGTCCCGTCCAAGC+GGG | 0.546462 | tig0021743:+15137 | None:intergenic |
| TTTCAGTATCACATAGGTAG+CGG | 0.546793 | tig0021743:-14798 | Msa1393510:intron |
| GTCGGATGAGAGAAGAGAAG+GGG | 0.547420 | tig0021743:+18112 | None:intergenic |
| GGATGAGAGAAGAGAAGGGG+AGG | 0.548176 | tig0021743:+18115 | None:intergenic |
| AAAGCCAACCTTTGATCAGA+GGG | 0.562777 | tig0021743:-15076 | Msa1393510:CDS |
| TTTGTCATTCCTTTGTGGAG+GGG | 0.566411 | tig0021743:-14625 | Msa1393510:three_prime_UTR |
| ACGGGACGCCATTTACTGGA+TGG | 0.567937 | tig0021743:-15128 | Msa1393510:CDS |
| TGATCAAAGATATGCCCGCT+TGG | 0.570252 | tig0021743:-15151 | Msa1393510:CDS |
| TAGGGCAAGCAAATTCCTCA+AGG | 0.571269 | tig0021743:-13743 | Msa1393510:three_prime_UTR |
| TGAAGAGTAGGCACATTGCT+GGG | 0.572384 | tig0021743:-15370 | Msa1393510:CDS |
| CTTGCTAGAGCATTGAGCTA+AGG | 0.573577 | tig0021743:-14740 | Msa1393510:exon |
| TGTGCAAAGGAAGAGATTGT+GGG | 0.575497 | tig0021743:-17825 | Msa1393510:CDS |
| GCTGCTCTTAATAAAAGGCT+AGG | 0.577639 | tig0021743:-15546 | Msa1393510:CDS |
| GAAAGCCAACCTTTGATCAG+AGG | 0.585264 | tig0021743:-15077 | Msa1393510:CDS |
| ACCTTATCATACTGAAGGTG+AGG | 0.586900 | tig0021743:+15468 | None:intergenic |
| CTAGGAACGTCTGATCGAGT+TGG | 0.594851 | tig0021743:-15528 | Msa1393510:CDS |
| CATTCACCTTATCATACTGA+AGG | 0.599577 | tig0021743:+15463 | None:intergenic |
| ACTGAAGGTGAGGAGGAATG+AGG | 0.603009 | tig0021743:+15478 | None:intergenic |
| TAGAGCATTGAGCTAAGGAA+TGG | 0.612462 | tig0021743:-14735 | Msa1393510:intron |
| AGATCATGACTGATGGAAGA+CGG | 0.614930 | tig0021743:-14192 | Msa1393510:three_prime_UTR |
| TACCATCCAGATGTGTGCAA+AGG | 0.620033 | tig0021743:-17838 | Msa1393510:CDS |
| TAGAGTTCACGCCGCTCCCA+CGG | 0.620538 | tig0021743:+14217 | None:intergenic |
| TTTGATCAGAGGGCAGATGA+GGG | 0.623430 | tig0021743:-15066 | Msa1393510:intron |
| TTATCATACTGAAGGTGAGG+AGG | 0.632325 | tig0021743:+15471 | None:intergenic |
| TCCACACCAAGATTAAGAAG+AGG | 0.636889 | tig0021743:+16215 | None:intergenic |
| AGGGCAAGCAAATTCCTCAA+GGG | 0.638788 | tig0021743:-13742 | Msa1393510:three_prime_UTR |
| TAATCACTTCCCCTCCACAA+AGG | 0.643844 | tig0021743:+14616 | None:intergenic |
| AACAGAAAAGAGGTCACCGT+GGG | 0.653183 | tig0021743:-14233 | Msa1393510:intron |
| CATCAAACTAAGAACCCTTG+AGG | 0.655570 | tig0021743:+13728 | None:intergenic |
| TAAATGGCGTCCCGTCCAAG+CGG | 0.662738 | tig0021743:+15136 | None:intergenic |
| AGGTAGCGGTCATATTGGAG+TGG | 0.672744 | tig0021743:-14784 | Msa1393510:CDS |
| GGACGCCATTTACTGGATGG+CGG | 0.712376 | tig0021743:-15125 | Msa1393510:CDS |
| GTGCAAAGGAAGAGATTGTG+GGG | 0.740567 | tig0021743:-17824 | Msa1393510:CDS |
| CTAAGACTGAGACTTGTGTG+CGG | 0.741400 | tig0021743:-13686 | Msa1393510:three_prime_UTR |
| GCAGTTTCACTTGATCAACG+AGG | 0.753816 | tig0021743:-17800 | Msa1393510:CDS |
| TAACAGAAAAGAGGTCACCG+TGG | 0.760537 | tig0021743:-14234 | Msa1393510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATATCAATATATTTA+AGG | + | tig0021743:14095-14114 | None:intergenic | 10.0% |
| !!! | AGGTTTTTTTTTTGAATATT+TGG | - | tig0021743:13886-13905 | Msa1393510:three_prime_UTR | 15.0% |
| !!! | GGTTTTTTTTTTGAATATTT+GGG | - | tig0021743:13887-13906 | Msa1393510:three_prime_UTR | 15.0% |
| !! | ATTTAATTGTTATGATTGTT+TGG | - | tig0021743:14049-14068 | Msa1393510:intron | 15.0% |
| !! | TTTAATTGTTATGATTGTTT+GGG | - | tig0021743:14050-14069 | Msa1393510:intron | 15.0% |
| !!! | ATATTGATATTGATTGATAT+TGG | - | tig0021743:14100-14119 | Msa1393510:intron | 15.0% |
| !!! | GTTGTTTTATTTTAAATCAA+CGG | + | tig0021743:14189-14208 | None:intergenic | 15.0% |
| !! | TACATAAACATTAAAAAAAC+TGG | + | tig0021743:14253-14272 | None:intergenic | 15.0% |
| !!! | TTCTTGAATTTTTATATTTG+AGG | - | tig0021743:14723-14742 | Msa1393510:intron | 15.0% |
| !!! | TTAAAAAGTACTATAAATTC+TGG | - | tig0021743:14796-14815 | Msa1393510:intron | 15.0% |
| !!! | CATTTTTCAATTAAAATCAA+AGG | + | tig0021743:15773-15792 | None:intergenic | 15.0% |
| !!! | CATTGTTATTAAGAATTTTA+TGG | + | tig0021743:15833-15852 | None:intergenic | 15.0% |
| !! | ATTAAGAAAATTACAAGTTA+TGG | - | tig0021743:16016-16035 | Msa1393510:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTTCTTAA+TGG | + | tig0021743:16422-16441 | None:intergenic | 15.0% |
| !!! | AAATCTGTTGTTTAAAAATT+AGG | + | tig0021743:16486-16505 | None:intergenic | 15.0% |
| !!! | TAATTTTTAAACAACAGATT+TGG | - | tig0021743:16485-16504 | Msa1393510:intron | 15.0% |
| !! | ATATAATACATTCCTTTATT+TGG | - | tig0021743:17455-17474 | Msa1393510:intron | 15.0% |
| !!! | TCAATTAAATCATTTTCAAT+TGG | - | tig0021743:17622-17641 | Msa1393510:intron | 15.0% |
| !! | TAATATGAAGCTTAAACTTA+AGG | - | tig0021743:13702-13721 | Msa1393510:three_prime_UTR | 20.0% |
| !!! | TCATCTAGTTTTTTGTTAAT+TGG | - | tig0021743:13854-13873 | Msa1393510:three_prime_UTR | 20.0% |
| !!! | TTGTTAATTGGATTTGTTTT+AGG | - | tig0021743:13866-13885 | Msa1393510:three_prime_UTR | 20.0% |
| !! | TAACTATGCAATGAAAATTA+AGG | + | tig0021743:14029-14048 | None:intergenic | 20.0% |
| !! | AACATTAAAAAAACTGGATT+TGG | + | tig0021743:14247-14266 | None:intergenic | 20.0% |
| !!! | TTTTGTGATTTTTATTGTGT+AGG | - | tig0021743:14586-14605 | Msa1393510:intron | 20.0% |
| !! | ATGATTCAGTGATTTAAAAA+AGG | - | tig0021743:14665-14684 | Msa1393510:intron | 20.0% |
| !!! | AACAATCTTAGTTCTTTAAT+TGG | - | tig0021743:14859-14878 | Msa1393510:intron | 20.0% |
| !!! | ACAATCTTAGTTCTTTAATT+GGG | - | tig0021743:14860-14879 | Msa1393510:intron | 20.0% |
| !!! | TTATTAAGAATTTTATGGAG+CGG | + | tig0021743:15828-15847 | None:intergenic | 20.0% |
| !! | TTCTTAATAACAATGTGATT+TGG | - | tig0021743:15838-15857 | Msa1393510:intron | 20.0% |
| !! | AAATTGCAGATATCAAATAA+AGG | + | tig0021743:15902-15921 | None:intergenic | 20.0% |
| !! | ATGATTAACTTAGCATTAAT+TGG | + | tig0021743:16175-16194 | None:intergenic | 20.0% |
| !!! | TTGACATAAAGAATTTTGAA+AGG | + | tig0021743:16361-16380 | None:intergenic | 20.0% |
| !! | TTTCAAAATTCTTTATGTCA+AGG | - | tig0021743:16360-16379 | Msa1393510:intron | 20.0% |
| !! | CTGTAAATTCAAAACATAAA+GGG | + | tig0021743:16579-16598 | None:intergenic | 20.0% |
| !! | TCTGTAAATTCAAAACATAA+AGG | + | tig0021743:16580-16599 | None:intergenic | 20.0% |
| !!! | TTCTACTTTCTATGTTATTT+TGG | - | tig0021743:16916-16935 | Msa1393510:intron | 20.0% |
| !!! | TTGGTTTTTGATATATGATT+TGG | - | tig0021743:16935-16954 | Msa1393510:intron | 20.0% |
| !! | ACAAATAAAATGATATGAGA+AGG | + | tig0021743:17210-17229 | None:intergenic | 20.0% |
| !!! | AACTTACAAATGATTTTGTA+GGG | - | tig0021743:17385-17404 | Msa1393510:intron | 20.0% |
| !!! | TTTTTGAATAAAGAGATTCA+AGG | - | tig0021743:17423-17442 | Msa1393510:intron | 20.0% |
| !! | TGAAAATTTGTGAAAATAAC+CGG | + | tig0021743:17784-17803 | None:intergenic | 20.0% |
| !! | TATTTGAAGATTCTTATTAG+AGG | - | tig0021743:17836-17855 | Msa1393510:CDS | 20.0% |
| !!! | AATGATCATGTTTACAATTT+TGG | + | tig0021743:18116-18135 | None:intergenic | 20.0% |
| !! | GGATAGTTTAGAGAAATTTT+AGG | + | tig0021743:14008-14027 | None:intergenic | 25.0% |
| !! | ATTGGAGATTTAAGATCAAT+TGG | - | tig0021743:14118-14137 | Msa1393510:intron | 25.0% |
| ! | TACACTTGTGTGAAATAATT+AGG | - | tig0021743:14297-14316 | Msa1393510:intron | 25.0% |
| ! | ACACTTGTGTGAAATAATTA+GGG | - | tig0021743:14298-14317 | Msa1393510:intron | 25.0% |
| !!! | CTAGAAAGTTTTGATGTTAA+TGG | - | tig0021743:14630-14649 | Msa1393510:three_prime_UTR | 25.0% |
| !! | ATTTTATCTTTCAGTTGTGA+TGG | - | tig0021743:14819-14838 | Msa1393510:intron | 25.0% |
| !! | CAATCTTAGTTCTTTAATTG+GGG | - | tig0021743:14861-14880 | Msa1393510:intron | 25.0% |
| ! | GGAAATTAAGGAAAATAATC+AGG | + | tig0021743:15085-15104 | None:intergenic | 25.0% |
| !! | CAGAAAATATGACTTTGAAA+TGG | + | tig0021743:15223-15242 | None:intergenic | 25.0% |
| ! | TCAAAATAGATGAAAATGCA+GGG | + | tig0021743:15474-15493 | None:intergenic | 25.0% |
| ! | TTCAAAATAGATGAAAATGC+AGG | + | tig0021743:15475-15494 | None:intergenic | 25.0% |
| ! | TGGTCACTGAAATATATAAA+AGG | - | tig0021743:15858-15877 | Msa1393510:intron | 25.0% |
| !!! | TCTGATGGTTTTAGTTTAAA+TGG | - | tig0021743:15941-15960 | Msa1393510:intron | 25.0% |
| ! | CAATAGAACTAATTGACTAT+TGG | + | tig0021743:15994-16013 | None:intergenic | 25.0% |
| !! | GCTAAAACATGATTTTTATG+AGG | - | tig0021743:16091-16110 | Msa1393510:intron | 25.0% |
| !! | TTTTAGTGTATTCCAATGAA+TGG | - | tig0021743:16118-16137 | Msa1393510:intron | 25.0% |
| !! | TTACTCTAAAAATGAAGAGT+AGG | - | tig0021743:16383-16402 | Msa1393510:intron | 25.0% |
| !! | TTTTTAAACAACAGATTTGG+AGG | - | tig0021743:16488-16507 | Msa1393510:intron | 25.0% |
| ! | AATTCAAAACATAAAGGGAA+TGG | + | tig0021743:16574-16593 | None:intergenic | 25.0% |
| !!! | ATGTTTTGAATTTACAGATG+TGG | - | tig0021743:16582-16601 | Msa1393510:intron | 25.0% |
| ! | AACATAGAGAAATAACAATG+TGG | + | tig0021743:16826-16845 | None:intergenic | 25.0% |
| !!! | GTTATTTCTCTATGTTTTGA+TGG | - | tig0021743:16830-16849 | Msa1393510:intron | 25.0% |
| !!! | TTTTTGATATATGATTTGGC+TGG | - | tig0021743:16939-16958 | Msa1393510:intron | 25.0% |
| !!! | GTTTTATTTCAGTATCACAT+AGG | - | tig0021743:16961-16980 | Msa1393510:intron | 25.0% |
| ! | ACAAAGGAATGACAAAATAT+TGG | + | tig0021743:17136-17155 | None:intergenic | 25.0% |
| !! | AATATTTTGTCATTCCTTTG+TGG | - | tig0021743:17135-17154 | Msa1393510:intron | 25.0% |
| ! | TATTTGACAATGTTTGTTCA+AGG | - | tig0021743:17170-17189 | Msa1393510:intron | 25.0% |
| !! | GAACTTACAAATGATTTTGT+AGG | - | tig0021743:17384-17403 | Msa1393510:intron | 25.0% |
| !! | ACTTACAAATGATTTTGTAG+GGG | - | tig0021743:17386-17405 | Msa1393510:intron | 25.0% |
| ! | ATAAGTGCATTTCCAAATAA+AGG | + | tig0021743:17470-17489 | None:intergenic | 25.0% |
| ! | AATTTCCTTTAACAGAAAAG+AGG | - | tig0021743:17522-17541 | Msa1393510:intron | 25.0% |
| ! | TGAATAATTCCAAGTCTTTA+GGG | + | tig0021743:17729-17748 | None:intergenic | 25.0% |
| ! | ATGAATAATTCCAAGTCTTT+AGG | + | tig0021743:17730-17749 | None:intergenic | 25.0% |
| ! | TGTACTTGATGCAATTTATT+AGG | - | tig0021743:18003-18022 | Msa1393510:intron | 25.0% |
| ! | GTACTTGATGCAATTTATTA+GGG | - | tig0021743:18004-18023 | Msa1393510:intron | 25.0% |
| TAATGTGATTGAGAGAAGAA+AGG | + | tig0021743:13684-13703 | None:intergenic | 30.0% | |
| GAGAATTTCCAATTAAGGTT+GGG | + | tig0021743:13765-13784 | None:intergenic | 30.0% | |
| TGAGAATTTCCAATTAAGGT+TGG | + | tig0021743:13766-13785 | None:intergenic | 30.0% | |
| AGCTTGAGAATTTCCAATTA+AGG | + | tig0021743:13770-13789 | None:intergenic | 30.0% | |
| TGTGACACAATTATTGATCT+TGG | + | tig0021743:14211-14230 | None:intergenic | 30.0% | |
| TTTATTGTGTAGGTATGAAG+AGG | - | tig0021743:14596-14615 | Msa1393510:three_prime_UTR | 30.0% | |
| TTATTGTGTAGGTATGAAGA+GGG | - | tig0021743:14597-14616 | Msa1393510:three_prime_UTR | 30.0% | |
| TTCAGTGATTTAAAAAAGGC+AGG | - | tig0021743:14669-14688 | Msa1393510:intron | 30.0% | |
| TGATTTAAAAAAGGCAGGAT+TGG | - | tig0021743:14674-14693 | Msa1393510:intron | 30.0% | |
| ! | TATTTGAGGTAAGAACTGTT+TGG | - | tig0021743:14737-14756 | Msa1393510:exon | 30.0% |
| AACTGTTTGGTCTATTTGTT+TGG | - | tig0021743:14750-14769 | Msa1393510:exon | 30.0% | |
| TAAACAAACAGAGAAATAGC+AGG | + | tig0021743:14891-14910 | None:intergenic | 30.0% | |
| GCTTATCTATCAAATAATGC+AGG | - | tig0021743:15015-15034 | Msa1393510:intron | 30.0% | |
| TCAAAACGAATGGGAAATTA+AGG | + | tig0021743:15097-15116 | None:intergenic | 30.0% | |
| CAGGATCTATTAACTTTAGA+AGG | + | tig0021743:15141-15160 | None:intergenic | 30.0% | |
| ATGAACATAGAAGAACAAAC+AGG | + | tig0021743:15177-15196 | None:intergenic | 30.0% | |
| TAAAGAGAATGTAACTGTGA+CGG | - | tig0021743:15306-15325 | Msa1393510:intron | 30.0% | |
| ! | GTAAGTGATTGTGAATTTTG+TGG | - | tig0021743:15348-15367 | Msa1393510:CDS | 30.0% |
| GTGCATTTCTGAATATACTT+TGG | - | tig0021743:15422-15441 | Msa1393510:intron | 30.0% | |
| GTAGAAAAACTAAACCTTGA+AGG | + | tig0021743:15608-15627 | None:intergenic | 30.0% | |
| AAAAACATAGTCCAACACAT+GGG | + | tig0021743:15645-15664 | None:intergenic | 30.0% | |
| AAAAAACATAGTCCAACACA+TGG | + | tig0021743:15646-15665 | None:intergenic | 30.0% | |
| TAGGGAGATTGAAATTAATG+AGG | + | tig0021743:15699-15718 | None:intergenic | 30.0% | |
| !! | AATCAAAGGCATCTATATTC+AGG | + | tig0021743:15759-15778 | None:intergenic | 30.0% |
| GTGTAAATTTATAGTGTGTG+TGG | - | tig0021743:16038-16057 | Msa1393510:intron | 30.0% | |
| ATTTATAGTGTGTGTGGTTA+AGG | - | tig0021743:16044-16063 | Msa1393510:intron | 30.0% | |
| TTAGCATTAATTGGAAGAAG+AGG | + | tig0021743:16166-16185 | None:intergenic | 30.0% | |
| CAACTTATGAAACAGTTGTT+TGG | - | tig0021743:16863-16882 | Msa1393510:intron | 30.0% | |
| ! | TGCTTTTATGTGCATTACAA+TGG | - | tig0021743:17678-17697 | Msa1393510:intron | 30.0% |
| GAATAATTCCAAGTCTTTAG+GGG | + | tig0021743:17728-17747 | None:intergenic | 30.0% | |
| !! | TTATTGATTGGCCTATAATC+CGG | - | tig0021743:17762-17781 | Msa1393510:intron | 30.0% |
| TGTGAAAATAACCGGATTAT+AGG | + | tig0021743:17776-17795 | None:intergenic | 30.0% | |
| CAGAAGATACAATAATCTTC+TGG | + | tig0021743:17880-17899 | None:intergenic | 30.0% | |
| ! | GTCTATTTATCTTTTGACAG+TGG | + | tig0021743:17934-17953 | None:intergenic | 30.0% |
| AAATAGACATGTTTCGATTC+AGG | - | tig0021743:17946-17965 | Msa1393510:intron | 30.0% | |
| AATAGACATGTTTCGATTCA+GGG | - | tig0021743:17947-17966 | Msa1393510:intron | 30.0% | |
| CAATTAAGGTTGGGAAAACA+CGG | + | tig0021743:13756-13775 | None:intergenic | 35.0% | |
| CACACAAGTGTAATCAAATG+TGG | + | tig0021743:14289-14308 | None:intergenic | 35.0% | |
| TATATGAAGATGACCGAGAA+AGG | + | tig0021743:14468-14487 | None:intergenic | 35.0% | |
| TATTGTGTAGGTATGAAGAG+GGG | - | tig0021743:14598-14617 | Msa1393510:three_prime_UTR | 35.0% | |
| TTATCTTTCAGTTGTGATGG+AGG | - | tig0021743:14822-14841 | Msa1393510:intron | 35.0% | |
| ATGTATGATAGCAGAAACCT+TGG | - | tig0021743:14948-14967 | Msa1393510:intron | 35.0% | |
| TGTATGATAGCAGAAACCTT+GGG | - | tig0021743:14949-14968 | Msa1393510:intron | 35.0% | |
| GCAGATTCATCAAAACGAAT+GGG | + | tig0021743:15106-15125 | None:intergenic | 35.0% | |
| TGCAGATTCATCAAAACGAA+TGG | + | tig0021743:15107-15126 | None:intergenic | 35.0% | |
| !! | ATTCGTTTTGATGAATCTGC+AGG | - | tig0021743:15106-15125 | Msa1393510:CDS | 35.0% |
| ! | AACAGGTCTCAATTTTTCAC+AGG | + | tig0021743:15160-15179 | None:intergenic | 35.0% |
| AAATGGCTACAATAGTGCAT+AGG | + | tig0021743:15206-15225 | None:intergenic | 35.0% | |
| !!! | CTTTAGTTTTACGACTGTTG+TGG | + | tig0021743:15291-15310 | None:intergenic | 35.0% |
| ACAAAATCTGATTGAAGCGT+TGG | + | tig0021743:15393-15412 | None:intergenic | 35.0% | |
| GAAAATGCAGGGAAATTTCA+TGG | + | tig0021743:15463-15482 | None:intergenic | 35.0% | |
| !! | TGAACATTTGTTGTGTGTAC+AGG | - | tig0021743:15519-15538 | Msa1393510:CDS | 35.0% |
| GGAACTCTCAAATATGTGAT+TGG | + | tig0021743:15584-15603 | None:intergenic | 35.0% | |
| GAAAAACTAAACCTTGAAGG+AGG | + | tig0021743:15605-15624 | None:intergenic | 35.0% | |
| !!! | TGGACTATGTTTTTTCAGCT+AGG | - | tig0021743:15651-15670 | Msa1393510:intron | 35.0% |
| ATCTACAATTGTGTGCAGTA+GGG | + | tig0021743:15717-15736 | None:intergenic | 35.0% | |
| AATCTACAATTGTGTGCAGT+AGG | + | tig0021743:15718-15737 | None:intergenic | 35.0% | |
| AGCTAGCTGCTCTTAATAAA+AGG | - | tig0021743:16214-16233 | Msa1393510:CDS | 35.0% | |
| !! | ATCGAGTTGGTAAGTTGTAT+TGG | - | tig0021743:16250-16269 | Msa1393510:intron | 35.0% |
| CATTCACCTTATCATACTGA+AGG | + | tig0021743:16305-16324 | None:intergenic | 35.0% | |
| TAAACAACAGATTTGGAGGT+TGG | - | tig0021743:16492-16511 | Msa1393510:intron | 35.0% | |
| !!! | AGGTTGGTTTTGTTCCATTT+AGG | - | tig0021743:16508-16527 | Msa1393510:intron | 35.0% |
| !!! | GGTTGGTTTTGTTCCATTTA+GGG | - | tig0021743:16509-16528 | Msa1393510:intron | 35.0% |
| TCCATTTAGGGATTTGTGAA+AGG | - | tig0021743:16521-16540 | Msa1393510:intron | 35.0% | |
| GTTGATTGCACAATTAAGGA+TGG | + | tig0021743:16762-16781 | None:intergenic | 35.0% | |
| ! | GCATGTTGATTGCACAATTA+AGG | + | tig0021743:16766-16785 | None:intergenic | 35.0% |
| GAAATAACAATGTGGCAAGT+TGG | + | tig0021743:16818-16837 | None:intergenic | 35.0% | |
| !!! | TCTATGTTTTGATGGAACGT+TGG | - | tig0021743:16838-16857 | Msa1393510:intron | 35.0% |
| TTTCAGTATCACATAGGTAG+CGG | - | tig0021743:16967-16986 | Msa1393510:intron | 35.0% | |
| ! | TGACAAAATATTGGCTGTCA+AGG | + | tig0021743:17127-17146 | None:intergenic | 35.0% |
| ! | ATTTTGTCATTCCTTTGTGG+AGG | - | tig0021743:17138-17157 | Msa1393510:intron | 35.0% |
| ! | TTTTGTCATTCCTTTGTGGA+GGG | - | tig0021743:17139-17158 | Msa1393510:intron | 35.0% |
| GCAACTAAGCTATATTGTGT+TGG | + | tig0021743:17312-17331 | None:intergenic | 35.0% | |
| ! | TCTTTAGGGGTAACAATGAA+TGG | + | tig0021743:17715-17734 | None:intergenic | 35.0% |
| ! | CTAGCATGTTGCTTATTGAT+TGG | - | tig0021743:17750-17769 | Msa1393510:intron | 35.0% |
| CCTAATGTAGTAATGTGATC+AGG | + | tig0021743:17978-17997 | None:intergenic | 35.0% | |
| CCTGATCACATTACTACATT+AGG | - | tig0021743:17975-17994 | Msa1393510:intron | 35.0% | |
| ! | TCAAGGGTTCTTAGTTTGAT+GGG | - | tig0021743:18039-18058 | Msa1393510:intron | 35.0% |
| GATTGAGAGAAGAAAGGAAG+AGG | + | tig0021743:13678-13697 | None:intergenic | 40.0% | |
| ! | TCCCTCTTTTCCCTTTTATC+TGG | - | tig0021743:13729-13748 | Msa1393510:three_prime_UTR | 40.0% |
| CCCAGATAAAAGGGAAAAGA+GGG | + | tig0021743:13733-13752 | None:intergenic | 40.0% | |
| ! | CCCTCTTTTCCCTTTTATCT+GGG | - | tig0021743:13730-13749 | Msa1393510:three_prime_UTR | 40.0% |
| AAAACACGGCCCAGATAAAA+GGG | + | tig0021743:13742-13761 | None:intergenic | 40.0% | |
| ! | CGTGTTTTCCCAACCTTAAT+TGG | - | tig0021743:13754-13773 | Msa1393510:three_prime_UTR | 40.0% |
| TGTGCAAAGGAAGAGATTGT+GGG | - | tig0021743:13940-13959 | Msa1393510:three_prime_UTR | 40.0% | |
| TACTGTACGACTCAACAGAA+GGG | + | tig0021743:14329-14348 | None:intergenic | 40.0% | |
| ATACTGTACGACTCAACAGA+AGG | + | tig0021743:14330-14349 | None:intergenic | 40.0% | |
| TCTGTTGAGTCGTACAGTAT+CGG | - | tig0021743:14330-14349 | Msa1393510:intron | 40.0% | |
| AACGAGAGATGTATCCTTTC+TGG | - | tig0021743:14430-14449 | Msa1393510:intron | 40.0% | |
| ACGAGAGATGTATCCTTTCT+GGG | - | tig0021743:14431-14450 | Msa1393510:intron | 40.0% | |
| GGTCATGATGTATCCTTTCT+CGG | - | tig0021743:14452-14471 | Msa1393510:intron | 40.0% | |
| GATTGTGCATACACTGCAAT+TGG | - | tig0021743:14772-14791 | Msa1393510:CDS | 40.0% | |
| AAGATAGTAACTGAGGCATG+TGG | - | tig0021743:14972-14991 | Msa1393510:intron | 40.0% | |
| ! | TAACTGTGACGGTTCGATTT+TGG | - | tig0021743:15317-15336 | Msa1393510:intron | 40.0% |
| GGGAAATTTCATGGCACAAA+AGG | + | tig0021743:15454-15473 | None:intergenic | 40.0% | |
| !! | CATTTGTTGTGTGTACAGGT+TGG | - | tig0021743:15523-15542 | Msa1393510:CDS | 40.0% |
| GGCTTACCTCTTCTTAATCT+TGG | - | tig0021743:15544-15563 | Msa1393510:CDS | 40.0% | |
| ACCTCTTCTTAATCTTGGTG+TGG | - | tig0021743:15549-15568 | Msa1393510:CDS | 40.0% | |
| TCCACACCAAGATTAAGAAG+AGG | + | tig0021743:15553-15572 | None:intergenic | 40.0% | |
| ATTTGAGAGTTCCTCCTTCA+AGG | - | tig0021743:15591-15610 | Msa1393510:intron | 40.0% | |
| AACACATGGGTGAAGAAATG+AGG | + | tig0021743:15632-15651 | None:intergenic | 40.0% | |
| TCATTTCTTCACCCATGTGT+TGG | - | tig0021743:15631-15650 | Msa1393510:intron | 40.0% | |
| AGATTAGTGTTTGCTCCAGT+TGG | - | tig0021743:15733-15752 | Msa1393510:intron | 40.0% | |
| TGTTGACGCAAACTTTCTGA+TGG | - | tig0021743:15926-15945 | Msa1393510:intron | 40.0% | |
| GCTGCTCTTAATAAAAGGCT+AGG | - | tig0021743:16219-16238 | Msa1393510:CDS | 40.0% | |
| TTATCATACTGAAGGTGAGG+AGG | + | tig0021743:16297-16316 | None:intergenic | 40.0% | |
| TCCTCACCTTCAGTATGATA+AGG | - | tig0021743:16296-16315 | Msa1393510:intron | 40.0% | |
| ACCTTATCATACTGAAGGTG+AGG | + | tig0021743:16300-16319 | None:intergenic | 40.0% | |
| GCCTTTCACAAATCCCTAAA+TGG | + | tig0021743:16525-16544 | None:intergenic | 40.0% | |
| AAAGCCAACCTTTGATCAGA+GGG | - | tig0021743:16689-16708 | Msa1393510:intron | 40.0% | |
| !! | TAGAGCATTGAGCTAAGGAA+TGG | - | tig0021743:17030-17049 | Msa1393510:intron | 40.0% |
| TTTGTCATTCCTTTGTGGAG+GGG | - | tig0021743:17140-17159 | Msa1393510:intron | 40.0% | |
| CATTGAGAGTCAGAAAAGGT+TGG | + | tig0021743:17287-17306 | None:intergenic | 40.0% | |
| GGAACATTGAGAGTCAGAAA+AGG | + | tig0021743:17291-17310 | None:intergenic | 40.0% | |
| ! | GGTGACCTCTTTTCTGTTAA+AGG | + | tig0021743:17530-17549 | None:intergenic | 40.0% |
| CTCTATCAGATCATGACTGA+TGG | - | tig0021743:17566-17585 | Msa1393510:intron | 40.0% | |
| AGATCATGACTGATGGAAGA+CGG | - | tig0021743:17573-17592 | Msa1393510:intron | 40.0% | |
| CATTGTTACCCCTAAAGACT+TGG | - | tig0021743:17717-17736 | Msa1393510:intron | 40.0% | |
| TTGCAGATTGCAGTAAAGTC+TGG | - | tig0021743:17812-17831 | Msa1393510:CDS | 40.0% | |
| AATTTAAGCCAGCAATGCTC+AGG | + | tig0021743:17909-17928 | None:intergenic | 40.0% | |
| CATCAAACTAAGAACCCTTG+AGG | + | tig0021743:18040-18059 | None:intergenic | 40.0% | |
| ! | CTCAAGGGTTCTTAGTTTGA+TGG | - | tig0021743:18038-18057 | Msa1393510:intron | 40.0% |
| GAGAGAAGAAAGGAAGAGGT+CGG | + | tig0021743:13674-13693 | None:intergenic | 45.0% | |
| GCCCAGATAAAAGGGAAAAG+AGG | + | tig0021743:13734-13753 | None:intergenic | 45.0% | |
| GAAAACACGGCCCAGATAAA+AGG | + | tig0021743:13743-13762 | None:intergenic | 45.0% | |
| TACCATCCAGATGTGTGCAA+AGG | - | tig0021743:13927-13946 | Msa1393510:three_prime_UTR | 45.0% | |
| TTCCTTTGCACACATCTGGA+TGG | + | tig0021743:13932-13951 | None:intergenic | 45.0% | |
| TCTCTTCCTTTGCACACATC+TGG | + | tig0021743:13936-13955 | None:intergenic | 45.0% | |
| GTGTGCAAAGGAAGAGATTG+TGG | - | tig0021743:13939-13958 | Msa1393510:three_prime_UTR | 45.0% | |
| GTGCAAAGGAAGAGATTGTG+GGG | - | tig0021743:13941-13960 | Msa1393510:three_prime_UTR | 45.0% | |
| GCAGTTTCACTTGATCAACG+AGG | - | tig0021743:13965-13984 | Msa1393510:intron | 45.0% | |
| GGATACATCATGACCCAGAA+AGG | + | tig0021743:14447-14466 | None:intergenic | 45.0% | |
| CCTCAGTTACTATCTTCCCA+AGG | + | tig0021743:14968-14987 | None:intergenic | 45.0% | |
| CCTTGGGAAGATAGTAACTG+AGG | - | tig0021743:14965-14984 | Msa1393510:intron | 45.0% | |
| GCATCTATATTCAGGCCAAC+TGG | + | tig0021743:15751-15770 | None:intergenic | 45.0% | |
| ! | GAGCGGCATGCTGAATTTTA+TGG | + | tig0021743:15811-15830 | None:intergenic | 45.0% |
| TGGAAGAAGAGGTTGCAGAA+GGG | + | tig0021743:16155-16174 | None:intergenic | 45.0% | |
| TTGGAAGAAGAGGTTGCAGA+AGG | + | tig0021743:16156-16175 | None:intergenic | 45.0% | |
| ATGAAGAGTAGGCACATTGC+TGG | - | tig0021743:16394-16413 | Msa1393510:intron | 45.0% | |
| TGAAGAGTAGGCACATTGCT+GGG | - | tig0021743:16395-16414 | Msa1393510:intron | 45.0% | |
| TGATCAAAGATATGCCCGCT+TGG | - | tig0021743:16614-16633 | Msa1393510:intron | 45.0% | |
| GGTGAGAATAGTCGCTACTT+TGG | - | tig0021743:16661-16680 | Msa1393510:intron | 45.0% | |
| GAAAGCCAACCTTTGATCAG+AGG | - | tig0021743:16688-16707 | Msa1393510:intron | 45.0% | |
| TTTGATCAGAGGGCAGATGA+GGG | - | tig0021743:16699-16718 | Msa1393510:intron | 45.0% | |
| ! | ATGTGGCAAGTTGGCAACAA+AGG | + | tig0021743:16809-16828 | None:intergenic | 45.0% |
| ! | CACATAGGTAGCGGTCATAT+TGG | - | tig0021743:16976-16995 | Msa1393510:intron | 45.0% |
| !! | CTTGCTAGAGCATTGAGCTA+AGG | - | tig0021743:17025-17044 | Msa1393510:intron | 45.0% |
| TAATCACTTCCCCTCCACAA+AGG | + | tig0021743:17152-17171 | None:intergenic | 45.0% | |
| GAGTCAGAAAAGGTTGGAAG+AGG | + | tig0021743:17281-17300 | None:intergenic | 45.0% | |
| TAACAGAAAAGAGGTCACCG+TGG | - | tig0021743:17531-17550 | Msa1393510:intron | 45.0% | |
| AACAGAAAAGAGGTCACCGT+GGG | - | tig0021743:17532-17551 | Msa1393510:intron | 45.0% | |
| TAGGGCAAGCAAATTCCTCA+AGG | - | tig0021743:18022-18041 | Msa1393510:intron | 45.0% | |
| AGGGCAAGCAAATTCCTCAA+GGG | - | tig0021743:18023-18042 | Msa1393510:intron | 45.0% | |
| CTAAGACTGAGACTTGTGTG+CGG | - | tig0021743:18079-18098 | Msa1393510:exon | 45.0% | |
| !!! | ATAAAATATATATTAGTTTT+TGG | - | tig0021743:17488-17507 | Msa1393510:intron | 5.0% |
| GTCGGATGAGAGAAGAGAAG+GGG | + | tig0021743:13656-13675 | None:intergenic | 50.0% | |
| GGTCGGATGAGAGAAGAGAA+GGG | + | tig0021743:13657-13676 | None:intergenic | 50.0% | |
| AGGTCGGATGAGAGAAGAGA+AGG | + | tig0021743:13658-13677 | None:intergenic | 50.0% | |
| CTAGGAACGTCTGATCGAGT+TGG | - | tig0021743:16237-16256 | Msa1393510:intron | 50.0% | |
| GTGAGGAGGAATGAGGAAAC+AGG | + | tig0021743:16283-16302 | None:intergenic | 50.0% | |
| ACTGAAGGTGAGGAGGAATG+AGG | + | tig0021743:16290-16309 | None:intergenic | 50.0% | |
| CAAAGATATGCCCGCTTGGA+CGG | - | tig0021743:16618-16637 | Msa1393510:intron | 50.0% | |
| AAAGATATGCCCGCTTGGAC+GGG | - | tig0021743:16619-16638 | Msa1393510:intron | 50.0% | |
| TCTCACCGCCATCCAGTAAA+TGG | + | tig0021743:16648-16667 | None:intergenic | 50.0% | |
| TCTGCCCTCTGATCAAAGGT+TGG | + | tig0021743:16696-16715 | None:intergenic | 50.0% | |
| CTCATCTGCCCTCTGATCAA+AGG | + | tig0021743:16700-16719 | None:intergenic | 50.0% | |
| CTTTGATCAGAGGGCAGATG+AGG | - | tig0021743:16698-16717 | Msa1393510:intron | 50.0% | |
| ! | AGGTAGCGGTCATATTGGAG+TGG | - | tig0021743:16981-17000 | Msa1393510:intron | 50.0% |
| ! | TGCAAAGACCTGAGCATTGC+TGG | - | tig0021743:17898-17917 | Msa1393510:intron | 50.0% |
| GGATGAGAGAAGAGAAGGGG+AGG | + | tig0021743:13653-13672 | None:intergenic | 55.0% | |
| TAAATGGCGTCCCGTCCAAG+CGG | + | tig0021743:16632-16651 | None:intergenic | 55.0% | |
| TTGGACGGGACGCCATTTAC+TGG | - | tig0021743:16633-16652 | Msa1393510:intron | 55.0% | |
| ACGGGACGCCATTTACTGGA+TGG | - | tig0021743:16637-16656 | Msa1393510:intron | 55.0% | |
| GGACGCCATTTACTGGATGG+CGG | - | tig0021743:16640-16659 | Msa1393510:intron | 55.0% | |
| AAAAGAGGTCACCGTGGGAG+CGG | - | tig0021743:17537-17556 | Msa1393510:intron | 55.0% | |
| CTGAGACTTGTGTGCGGCAA+TGG | - | tig0021743:18085-18104 | Msa1393510:five_prime_UTR | 55.0% | |
| GTGCTGCAGCGGCCATTCAT+TGG | + | tig0021743:16133-16152 | None:intergenic | 60.0% | |
| !! | GTTGCAGAAGGGTGCTGCAG+CGG | + | tig0021743:16144-16163 | None:intergenic | 60.0% |
| AAATGGCGTCCCGTCCAAGC+GGG | + | tig0021743:16631-16650 | None:intergenic | 60.0% | |
| TAGAGTTCACGCCGCTCCCA+CGG | + | tig0021743:17551-17570 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021743 | gene | 13632 | 18155 | 13632 | ID=Msa1393510;Name=Msa1393510 |
| tig0021743 | mRNA | 13632 | 18155 | 13632 | ID=Msa1393510-mRNA-1;Parent=Msa1393510;Name=Msa1393510-mRNA-1;_AED=0.30;_eAED=0.30;_QI=74|0.77|0.9|1|0.55|0.7|10|491|168 |
| tig0021743 | exon | 13632 | 13969 | 13632 | ID=Msa1393510-mRNA-1:exon:13909;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 14176 | 14250 | 14176 | ID=Msa1393510-mRNA-1:exon:13908;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 14596 | 14654 | 14596 | ID=Msa1393510-mRNA-1:exon:13907;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 14736 | 14814 | 14736 | ID=Msa1393510-mRNA-1:exon:13906;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 15067 | 15188 | 15067 | ID=Msa1393510-mRNA-1:exon:13905;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 15342 | 15405 | 15342 | ID=Msa1393510-mRNA-1:exon:13904;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 15470 | 15571 | 15470 | ID=Msa1393510-mRNA-1:exon:13903;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 16175 | 16246 | 16175 | ID=Msa1393510-mRNA-1:exon:13902;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 17792 | 17860 | 17792 | ID=Msa1393510-mRNA-1:exon:13901;Parent=Msa1393510-mRNA-1 |
| tig0021743 | exon | 18064 | 18155 | 18064 | ID=Msa1393510-mRNA-1:exon:13900;Parent=Msa1393510-mRNA-1 |
| tig0021743 | five_prime_UTR | 18082 | 18155 | 18082 | ID=Msa1393510-mRNA-1:five_prime_utr;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 18064 | 18081 | 18064 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 17792 | 17860 | 17792 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 16175 | 16246 | 16175 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 15470 | 15571 | 15470 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 15342 | 15405 | 15342 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 15067 | 15188 | 15067 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | CDS | 14755 | 14814 | 14755 | ID=Msa1393510-mRNA-1:cds;Parent=Msa1393510-mRNA-1 |
| tig0021743 | three_prime_UTR | 14736 | 14754 | 14736 | ID=Msa1393510-mRNA-1:three_prime_utr;Parent=Msa1393510-mRNA-1 |
| tig0021743 | three_prime_UTR | 14596 | 14654 | 14596 | ID=Msa1393510-mRNA-1:three_prime_utr;Parent=Msa1393510-mRNA-1 |
| tig0021743 | three_prime_UTR | 14176 | 14250 | 14176 | ID=Msa1393510-mRNA-1:three_prime_utr;Parent=Msa1393510-mRNA-1 |
| tig0021743 | three_prime_UTR | 13632 | 13969 | 13632 | ID=Msa1393510-mRNA-1:three_prime_utr;Parent=Msa1393510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
