Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426270 | KEH28975.1 | 85.714 | 63 | 7 | 1 | 92 | 154 | 1 | 61 | 1.71e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426270 | A0A072USW6 | 85.714 | 63 | 7 | 1 | 92 | 154 | 1 | 61 | 8.16e-28 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1393510 | Msa1426270 | 0.964976 | 5.208189e-124 | -8.615850e-47 |
| Msa0707310 | Msa1426270 | 0.959808 | 7.501589e-118 | -8.615850e-47 |
| Msa0233810 | Msa1426270 | 0.801013 | 1.099805e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426270 | MtrunA17_Chr1g0204831 | 62.791 | 86 | 25 | 3 | 66 | 151 | 348 | 426 | 4.37e-22 | 91.7 |
| Msa1426270 | MtrunA17_Chr1g0166381 | 52.222 | 90 | 34 | 4 | 66 | 154 | 361 | 442 | 1.16e-20 | 87.8 |
| Msa1426270 | MtrunA17_Chr6g0460021 | 85.000 | 40 | 6 | 0 | 123 | 162 | 4 | 43 | 8.39e-19 | 76.3 |
| Msa1426270 | MtrunA17_Chr1g0185201 | 41.379 | 116 | 55 | 5 | 44 | 152 | 355 | 464 | 1.26e-16 | 76.3 |
| Msa1426270 | MtrunA17_Chr4g0001611 | 71.053 | 38 | 11 | 0 | 2 | 39 | 73 | 110 | 5.62e-13 | 63.2 |
| Msa1426270 | MtrunA17_Chr7g0260211 | 40.541 | 111 | 53 | 5 | 49 | 152 | 350 | 454 | 1.20e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426270 | AT4G14740.3 | 46.067 | 89 | 41 | 3 | 66 | 154 | 230 | 311 | 4.13e-18 | 80.1 |
| Msa1426270 | AT4G14740.1 | 45.556 | 90 | 40 | 4 | 66 | 154 | 369 | 450 | 5.27e-18 | 80.5 |
| Msa1426270 | AT4G14740.2 | 45.556 | 90 | 40 | 4 | 66 | 154 | 369 | 450 | 5.27e-18 | 80.5 |
| Msa1426270 | AT3G22810.3 | 48.315 | 89 | 39 | 3 | 66 | 154 | 226 | 307 | 8.78e-17 | 76.6 |
| Msa1426270 | AT3G22810.1 | 47.778 | 90 | 38 | 4 | 66 | 154 | 364 | 445 | 1.75e-16 | 76.3 |
| Msa1426270 | AT5G43870.1 | 52.000 | 75 | 31 | 2 | 66 | 140 | 347 | 416 | 9.28e-16 | 73.9 |
Find 83 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATCATGTTTACAATTT+TGG | 0.081970 | tig0025962:+14568 | None:intergenic |
| TGTACTTGATGCAATTTATT+AGG | 0.125993 | tig0025962:-14678 | Msa1426270:three_prime_UTR |
| AAATAGACATGTTTCGATTC+AGG | 0.231481 | tig0025962:-14735 | Msa1426270:three_prime_UTR |
| GGCTTACCTCTTCTTAATCT+TGG | 0.247982 | tig0025962:-17136 | Msa1426270:CDS |
| TGCAAAGACCTGAGCATTGC+TGG | 0.291496 | tig0025962:-14783 | Msa1426270:three_prime_UTR |
| GTACTTGATGCAATTTATTA+GGG | 0.294884 | tig0025962:-14677 | Msa1426270:three_prime_UTR |
| TCTCACCGCCATCCAGTAAA+TGG | 0.298174 | tig0025962:+16035 | None:intergenic |
| CTCAAGGGTTCTTAGTTTGA+TGG | 0.314676 | tig0025962:-14643 | Msa1426270:three_prime_UTR |
| CAGAAGATACAATAATCTTC+TGG | 0.338208 | tig0025962:+14804 | None:intergenic |
| GTGAGGAGGAATGAGGAAAC+AGG | 0.345932 | tig0025962:+16400 | None:intergenic |
| AGCTAGCTGCTCTTAATAAA+AGG | 0.348208 | tig0025962:-16466 | Msa1426270:CDS |
| ACAAAGGAATGACAAAATAT+TGG | 0.354391 | tig0025962:+15547 | None:intergenic |
| TCTCTTCCTTTGCACACATC+TGG | 0.358215 | tig0025962:+18746 | None:intergenic |
| ATTTGAGAGTTCCTCCTTCA+AGG | 0.376894 | tig0025962:-17089 | Msa1426270:intron |
| TTGGACGGGACGCCATTTAC+TGG | 0.382972 | tig0025962:-16047 | Msa1426270:CDS |
| TAATATGAAGCTTAAACTTA+AGG | 0.384161 | tig0025962:-18977 | Msa1426270:intron |
| CCTGATCACATTACTACATT+AGG | 0.386162 | tig0025962:-14706 | Msa1426270:three_prime_UTR |
| TATTTGAAGATTCTTATTAG+AGG | 0.394428 | tig0025962:-14845 | Msa1426270:three_prime_UTR |
| ATCGAGTTGGTAAGTTGTAT+TGG | 0.419679 | tig0025962:-16430 | Msa1426270:CDS |
| CACATAGGTAGCGGTCATAT+TGG | 0.420446 | tig0025962:-15704 | Msa1426270:CDS |
| TTGCAGATTGCAGTAAAGTC+TGG | 0.436893 | tig0025962:-14869 | Msa1426270:intron |
| TCAAGGGTTCTTAGTTTGAT+GGG | 0.437468 | tig0025962:-14642 | Msa1426270:three_prime_UTR |
| ATGAAGAGTAGGCACATTGC+TGG | 0.442785 | tig0025962:-16286 | Msa1426270:CDS |
| AGGTCGGATGAGAGAAGAGA+AGG | 0.445413 | tig0025962:+19024 | None:intergenic |
| AATAGACATGTTTCGATTCA+GGG | 0.449064 | tig0025962:-14734 | Msa1426270:three_prime_UTR |
| GGTCGGATGAGAGAAGAGAA+GGG | 0.449715 | tig0025962:+19025 | None:intergenic |
| TCCTCACCTTCAGTATGATA+AGG | 0.481722 | tig0025962:-16384 | Msa1426270:intron |
| CAAAGATATGCCCGCTTGGA+CGG | 0.486154 | tig0025962:-16062 | Msa1426270:CDS |
| GGAACTCTCAAATATGTGAT+TGG | 0.492673 | tig0025962:+17099 | None:intergenic |
| AATTTCCTTTAACAGAAAAG+AGG | 0.495172 | tig0025962:-15159 | Msa1426270:intron |
| CTGAGACTTGTGTGCGGCAA+TGG | 0.496640 | tig0025962:-14596 | Msa1426270:three_prime_UTR |
| GAGAGAAGAAAGGAAGAGGT+CGG | 0.499165 | tig0025962:+19008 | None:intergenic |
| GGTGAGAATAGTCGCTACTT+TGG | 0.499376 | tig0025962:-16019 | Msa1426270:CDS |
| AAAAGAGGTCACCGTGGGAG+CGG | 0.503931 | tig0025962:-15144 | Msa1426270:three_prime_UTR |
| TATTTGACAATGTTTGTTCA+AGG | 0.504179 | tig0025962:-15510 | Msa1426270:intron |
| AAAGATATGCCCGCTTGGAC+GGG | 0.506528 | tig0025962:-16061 | Msa1426270:CDS |
| AATTTAAGCCAGCAATGCTC+AGG | 0.508204 | tig0025962:+14775 | None:intergenic |
| GATTGAGAGAAGAAAGGAAG+AGG | 0.512181 | tig0025962:+19004 | None:intergenic |
| TTCCTTTGCACACATCTGGA+TGG | 0.515608 | tig0025962:+18750 | None:intergenic |
| TAATGTGATTGAGAGAAGAA+AGG | 0.522994 | tig0025962:+18998 | None:intergenic |
| ACCTCTTCTTAATCTTGGTG+TGG | 0.526438 | tig0025962:-17131 | Msa1426270:CDS |
| CTCTATCAGATCATGACTGA+TGG | 0.527988 | tig0025962:-15115 | Msa1426270:three_prime_UTR |
| GTGTGCAAAGGAAGAGATTG+TGG | 0.529500 | tig0025962:-18740 | Msa1426270:CDS |
| CCTAATGTAGTAATGTGATC+AGG | 0.535415 | tig0025962:+14706 | None:intergenic |
| CTCATCTGCCCTCTGATCAA+AGG | 0.538021 | tig0025962:+15983 | None:intergenic |
| TCTGCCCTCTGATCAAAGGT+TGG | 0.539925 | tig0025962:+15987 | None:intergenic |
| CTTTGATCAGAGGGCAGATG+AGG | 0.544340 | tig0025962:-15982 | Msa1426270:CDS |
| AAATGGCGTCCCGTCCAAGC+GGG | 0.546462 | tig0025962:+16052 | None:intergenic |
| TTTCAGTATCACATAGGTAG+CGG | 0.546793 | tig0025962:-15713 | Msa1426270:intron |
| GTCGGATGAGAGAAGAGAAG+GGG | 0.547420 | tig0025962:+19026 | None:intergenic |
| GGATGAGAGAAGAGAAGGGG+AGG | 0.548176 | tig0025962:+19029 | None:intergenic |
| AAAGCCAACCTTTGATCAGA+GGG | 0.562777 | tig0025962:-15991 | Msa1426270:CDS |
| TTTGTCATTCCTTTGTGGAG+GGG | 0.566411 | tig0025962:-15540 | Msa1426270:three_prime_UTR |
| ACGGGACGCCATTTACTGGA+TGG | 0.567937 | tig0025962:-16043 | Msa1426270:CDS |
| TGATCAAAGATATGCCCGCT+TGG | 0.570252 | tig0025962:-16066 | Msa1426270:CDS |
| TAGGGCAAGCAAATTCCTCA+AGG | 0.571269 | tig0025962:-14659 | Msa1426270:three_prime_UTR |
| TGAAGAGTAGGCACATTGCT+GGG | 0.572384 | tig0025962:-16285 | Msa1426270:CDS |
| CTTGCTAGAGCATTGAGCTA+AGG | 0.573577 | tig0025962:-15655 | Msa1426270:exon |
| TGTGCAAAGGAAGAGATTGT+GGG | 0.575497 | tig0025962:-18739 | Msa1426270:CDS |
| GCTGCTCTTAATAAAAGGCT+AGG | 0.577639 | tig0025962:-16461 | Msa1426270:CDS |
| GAAAGCCAACCTTTGATCAG+AGG | 0.585264 | tig0025962:-15992 | Msa1426270:CDS |
| ACCTTATCATACTGAAGGTG+AGG | 0.586900 | tig0025962:+16383 | None:intergenic |
| CTAGGAACGTCTGATCGAGT+TGG | 0.594851 | tig0025962:-16443 | Msa1426270:CDS |
| CATTCACCTTATCATACTGA+AGG | 0.599577 | tig0025962:+16378 | None:intergenic |
| ACTGAAGGTGAGGAGGAATG+AGG | 0.603009 | tig0025962:+16393 | None:intergenic |
| TAGAGCATTGAGCTAAGGAA+TGG | 0.612462 | tig0025962:-15650 | Msa1426270:intron |
| AGATCATGACTGATGGAAGA+CGG | 0.614930 | tig0025962:-15108 | Msa1426270:three_prime_UTR |
| TACCATCCAGATGTGTGCAA+AGG | 0.620033 | tig0025962:-18752 | Msa1426270:CDS |
| TAGAGTTCACGCCGCTCCCA+CGG | 0.620538 | tig0025962:+15133 | None:intergenic |
| TTTGATCAGAGGGCAGATGA+GGG | 0.623430 | tig0025962:-15981 | Msa1426270:intron |
| TTATCATACTGAAGGTGAGG+AGG | 0.632325 | tig0025962:+16386 | None:intergenic |
| TCCACACCAAGATTAAGAAG+AGG | 0.636889 | tig0025962:+17130 | None:intergenic |
| AGGGCAAGCAAATTCCTCAA+GGG | 0.638788 | tig0025962:-14658 | Msa1426270:three_prime_UTR |
| TAATCACTTCCCCTCCACAA+AGG | 0.643844 | tig0025962:+15531 | None:intergenic |
| AACAGAAAAGAGGTCACCGT+GGG | 0.653183 | tig0025962:-15149 | Msa1426270:intron |
| CATCAAACTAAGAACCCTTG+AGG | 0.655570 | tig0025962:+14644 | None:intergenic |
| TAAATGGCGTCCCGTCCAAG+CGG | 0.662738 | tig0025962:+16051 | None:intergenic |
| AGGTAGCGGTCATATTGGAG+TGG | 0.672744 | tig0025962:-15699 | Msa1426270:CDS |
| GGACGCCATTTACTGGATGG+CGG | 0.712376 | tig0025962:-16040 | Msa1426270:CDS |
| GTGCAAAGGAAGAGATTGTG+GGG | 0.740567 | tig0025962:-18738 | Msa1426270:CDS |
| CTAAGACTGAGACTTGTGTG+CGG | 0.741400 | tig0025962:-14602 | Msa1426270:three_prime_UTR |
| GCAGTTTCACTTGATCAACG+AGG | 0.753816 | tig0025962:-18714 | Msa1426270:CDS |
| TAACAGAAAAGAGGTCACCG+TGG | 0.760537 | tig0025962:-15150 | Msa1426270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATATCAATATATTTA+AGG | + | tig0025962:15011-15030 | None:intergenic | 10.0% |
| !!! | AGGTTTTTTTTTTGAATATT+TGG | - | tig0025962:14802-14821 | Msa1426270:three_prime_UTR | 15.0% |
| !!! | GGTTTTTTTTTTGAATATTT+GGG | - | tig0025962:14803-14822 | Msa1426270:three_prime_UTR | 15.0% |
| !! | ATTTAATTGTTATGATTGTT+TGG | - | tig0025962:14965-14984 | Msa1426270:intron | 15.0% |
| !! | TTTAATTGTTATGATTGTTT+GGG | - | tig0025962:14966-14985 | Msa1426270:intron | 15.0% |
| !!! | ATATTGATATTGATTGATAT+TGG | - | tig0025962:15016-15035 | Msa1426270:intron | 15.0% |
| !!! | GTTGTTTTATTTTAAATCAA+CGG | + | tig0025962:15105-15124 | None:intergenic | 15.0% |
| !! | TACATAAACATTAAAAAAAC+TGG | + | tig0025962:15169-15188 | None:intergenic | 15.0% |
| !!! | TTAAAAAGTACTATAAATTC+TGG | - | tig0025962:15711-15730 | Msa1426270:intron | 15.0% |
| !!! | CATTTTTCAATTAAAATCAA+AGG | + | tig0025962:16688-16707 | None:intergenic | 15.0% |
| !!! | CATTGTTATTAAGAATTTTA+TGG | + | tig0025962:16748-16767 | None:intergenic | 15.0% |
| !! | ATTAAGAAAATTACAAGTTA+TGG | - | tig0025962:16931-16950 | Msa1426270:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTTCTTAA+TGG | + | tig0025962:17337-17356 | None:intergenic | 15.0% |
| !!! | AAATCTGTTGTTTAAAAATT+AGG | + | tig0025962:17401-17420 | None:intergenic | 15.0% |
| !!! | TAATTTTTAAACAACAGATT+TGG | - | tig0025962:17400-17419 | Msa1426270:intron | 15.0% |
| !! | ATATAATACATTCCTTTATT+TGG | - | tig0025962:18369-18388 | Msa1426270:intron | 15.0% |
| !!! | TCAATTAAATCATTTTCAAT+TGG | - | tig0025962:18536-18555 | Msa1426270:intron | 15.0% |
| !! | TAATATGAAGCTTAAACTTA+AGG | - | tig0025962:14618-14637 | Msa1426270:three_prime_UTR | 20.0% |
| !!! | TCATCTAGTTTTTTGTTAAT+TGG | - | tig0025962:14770-14789 | Msa1426270:three_prime_UTR | 20.0% |
| !!! | TTGTTAATTGGATTTGTTTT+AGG | - | tig0025962:14782-14801 | Msa1426270:three_prime_UTR | 20.0% |
| !! | TAACTATGCAATGAAAATTA+AGG | + | tig0025962:14945-14964 | None:intergenic | 20.0% |
| !! | AACATTAAAAAAACTGGATT+TGG | + | tig0025962:15163-15182 | None:intergenic | 20.0% |
| !!! | TTTTGTGATTTTTATTGTGT+AGG | - | tig0025962:15502-15521 | Msa1426270:intron | 20.0% |
| !! | ATGATTCAGTGATTTAAAAA+AGG | - | tig0025962:15581-15600 | Msa1426270:intron | 20.0% |
| !!! | GTTCTTGAATTTTATATTTG+AGG | - | tig0025962:15638-15657 | Msa1426270:intron | 20.0% |
| !!! | AACAATCTTAGTTCTTTAAT+TGG | - | tig0025962:15774-15793 | Msa1426270:intron | 20.0% |
| !!! | ACAATCTTAGTTCTTTAATT+GGG | - | tig0025962:15775-15794 | Msa1426270:intron | 20.0% |
| !!! | TTATTAAGAATTTTATGGAG+CGG | + | tig0025962:16743-16762 | None:intergenic | 20.0% |
| !! | TTCTTAATAACAATGTGATT+TGG | - | tig0025962:16753-16772 | Msa1426270:intron | 20.0% |
| !! | AAATTGCAGATATCAAATAA+AGG | + | tig0025962:16817-16836 | None:intergenic | 20.0% |
| !! | ATGATTAACTTAGCATTAAT+TGG | + | tig0025962:17090-17109 | None:intergenic | 20.0% |
| !!! | TTGACATAAAGAATTTTGAA+AGG | + | tig0025962:17276-17295 | None:intergenic | 20.0% |
| !! | TTTCAAAATTCTTTATGTCA+AGG | - | tig0025962:17275-17294 | Msa1426270:intron | 20.0% |
| !! | CTGTAAATTCAAAACATAAA+GGG | + | tig0025962:17494-17513 | None:intergenic | 20.0% |
| !! | TCTGTAAATTCAAAACATAA+AGG | + | tig0025962:17495-17514 | None:intergenic | 20.0% |
| !!! | TTCTACTTTCTATGTTATTT+TGG | - | tig0025962:17831-17850 | Msa1426270:intron | 20.0% |
| !!! | TTGGTTTTTGATATATGATT+TGG | - | tig0025962:17850-17869 | Msa1426270:intron | 20.0% |
| !! | ACAAATAAAATGATATGAGA+AGG | + | tig0025962:18124-18143 | None:intergenic | 20.0% |
| !!! | AACTTACAAATGATTTTGTA+GGG | - | tig0025962:18299-18318 | Msa1426270:intron | 20.0% |
| !!! | TTTTTGAATAAAGAGATTCA+AGG | - | tig0025962:18337-18356 | Msa1426270:intron | 20.0% |
| !! | TGAAAATTTGTGAAAATAAC+CGG | + | tig0025962:18698-18717 | None:intergenic | 20.0% |
| !! | TATTTGAAGATTCTTATTAG+AGG | - | tig0025962:18750-18769 | Msa1426270:CDS | 20.0% |
| !!! | AATGATCATGTTTACAATTT+TGG | + | tig0025962:19030-19049 | None:intergenic | 20.0% |
| !! | GGATAGTTTAGAGAAATTTT+AGG | + | tig0025962:14924-14943 | None:intergenic | 25.0% |
| !! | ATTGGAGATTTAAGATCAAT+TGG | - | tig0025962:15034-15053 | Msa1426270:intron | 25.0% |
| ! | TACACTTGTGTGAAATAATT+AGG | - | tig0025962:15213-15232 | Msa1426270:intron | 25.0% |
| ! | ACACTTGTGTGAAATAATTA+GGG | - | tig0025962:15214-15233 | Msa1426270:intron | 25.0% |
| !!! | CTAGAAAGTTTTGATGTTAA+TGG | - | tig0025962:15546-15565 | Msa1426270:three_prime_UTR | 25.0% |
| !! | ATTTTATCTTTCAGTTGTGA+TGG | - | tig0025962:15734-15753 | Msa1426270:intron | 25.0% |
| !! | CAATCTTAGTTCTTTAATTG+GGG | - | tig0025962:15776-15795 | Msa1426270:intron | 25.0% |
| ! | GGAAATTAAGGAAAATAATC+AGG | + | tig0025962:16000-16019 | None:intergenic | 25.0% |
| !! | CAGAAAATATGACTTTGAAA+TGG | + | tig0025962:16138-16157 | None:intergenic | 25.0% |
| ! | TCAAAATAGATGAAAATGCA+GGG | + | tig0025962:16389-16408 | None:intergenic | 25.0% |
| ! | TTCAAAATAGATGAAAATGC+AGG | + | tig0025962:16390-16409 | None:intergenic | 25.0% |
| ! | TGGTCACTGAAATATATAAA+AGG | - | tig0025962:16773-16792 | Msa1426270:intron | 25.0% |
| !!! | TCTGATGGTTTTAGTTTAAA+TGG | - | tig0025962:16856-16875 | Msa1426270:intron | 25.0% |
| ! | CAATAGAACTAATTGACTAT+TGG | + | tig0025962:16909-16928 | None:intergenic | 25.0% |
| !! | GCTAAAACATGATTTTTATG+AGG | - | tig0025962:17006-17025 | Msa1426270:intron | 25.0% |
| !! | TTTTAGTGTATTCCAATGAA+TGG | - | tig0025962:17033-17052 | Msa1426270:intron | 25.0% |
| !! | TTACTCTAAAAATGAAGAGT+AGG | - | tig0025962:17298-17317 | Msa1426270:intron | 25.0% |
| !! | TTTTTAAACAACAGATTTGG+AGG | - | tig0025962:17403-17422 | Msa1426270:intron | 25.0% |
| ! | AATTCAAAACATAAAGGGAA+TGG | + | tig0025962:17489-17508 | None:intergenic | 25.0% |
| !!! | ATGTTTTGAATTTACAGATG+TGG | - | tig0025962:17497-17516 | Msa1426270:intron | 25.0% |
| ! | AACATAGAGAAATAACAATG+TGG | + | tig0025962:17741-17760 | None:intergenic | 25.0% |
| !!! | GTTATTTCTCTATGTTTTGA+TGG | - | tig0025962:17745-17764 | Msa1426270:intron | 25.0% |
| !!! | TTTTTGATATATGATTTGGC+TGG | - | tig0025962:17854-17873 | Msa1426270:intron | 25.0% |
| !!! | GTTTTATTTCAGTATCACAT+AGG | - | tig0025962:17876-17895 | Msa1426270:intron | 25.0% |
| ! | ACAAAGGAATGACAAAATAT+TGG | + | tig0025962:18051-18070 | None:intergenic | 25.0% |
| !! | AATATTTTGTCATTCCTTTG+TGG | - | tig0025962:18050-18069 | Msa1426270:intron | 25.0% |
| ! | TATTTGACAATGTTTGTTCA+AGG | - | tig0025962:18085-18104 | Msa1426270:intron | 25.0% |
| !! | GAACTTACAAATGATTTTGT+AGG | - | tig0025962:18298-18317 | Msa1426270:intron | 25.0% |
| !! | ACTTACAAATGATTTTGTAG+GGG | - | tig0025962:18300-18319 | Msa1426270:intron | 25.0% |
| ! | ATAAGTGCATTTCCAAATAA+AGG | + | tig0025962:18384-18403 | None:intergenic | 25.0% |
| ! | AATTTCCTTTAACAGAAAAG+AGG | - | tig0025962:18436-18455 | Msa1426270:intron | 25.0% |
| ! | TGAATAATTCCAAGTCTTTA+GGG | + | tig0025962:18643-18662 | None:intergenic | 25.0% |
| ! | ATGAATAATTCCAAGTCTTT+AGG | + | tig0025962:18644-18663 | None:intergenic | 25.0% |
| ! | TGTACTTGATGCAATTTATT+AGG | - | tig0025962:18917-18936 | Msa1426270:intron | 25.0% |
| ! | GTACTTGATGCAATTTATTA+GGG | - | tig0025962:18918-18937 | Msa1426270:intron | 25.0% |
| TAATGTGATTGAGAGAAGAA+AGG | + | tig0025962:14600-14619 | None:intergenic | 30.0% | |
| GAGAATTTCCAATTAAGGTT+GGG | + | tig0025962:14681-14700 | None:intergenic | 30.0% | |
| TGAGAATTTCCAATTAAGGT+TGG | + | tig0025962:14682-14701 | None:intergenic | 30.0% | |
| AGCTTGAGAATTTCCAATTA+AGG | + | tig0025962:14686-14705 | None:intergenic | 30.0% | |
| TGTGACACAATTATTGATCT+TGG | + | tig0025962:15127-15146 | None:intergenic | 30.0% | |
| TTTATTGTGTAGGTATGAAG+AGG | - | tig0025962:15512-15531 | Msa1426270:three_prime_UTR | 30.0% | |
| TTATTGTGTAGGTATGAAGA+GGG | - | tig0025962:15513-15532 | Msa1426270:three_prime_UTR | 30.0% | |
| TTCAGTGATTTAAAAAAGGC+AGG | - | tig0025962:15585-15604 | Msa1426270:intron | 30.0% | |
| TGATTTAAAAAAGGCAGGAT+TGG | - | tig0025962:15590-15609 | Msa1426270:intron | 30.0% | |
| ! | TATTTGAGGTAAGAACTGTT+TGG | - | tig0025962:15652-15671 | Msa1426270:exon | 30.0% |
| AACTGTTTGGTCTATTTGTT+TGG | - | tig0025962:15665-15684 | Msa1426270:exon | 30.0% | |
| TAAACAAACAGAGAAATAGC+AGG | + | tig0025962:15806-15825 | None:intergenic | 30.0% | |
| GCTTATCTATCAAATAATGC+AGG | - | tig0025962:15930-15949 | Msa1426270:intron | 30.0% | |
| TCAAAACGAATGGGAAATTA+AGG | + | tig0025962:16012-16031 | None:intergenic | 30.0% | |
| CAGGATCTATTAACTTTAGA+AGG | + | tig0025962:16056-16075 | None:intergenic | 30.0% | |
| ATGAACATAGAAGAACAAAC+AGG | + | tig0025962:16092-16111 | None:intergenic | 30.0% | |
| TAAAGAGAATGTAACTGTGA+CGG | - | tig0025962:16221-16240 | Msa1426270:intron | 30.0% | |
| ! | GTAAGTGATTGTGAATTTTG+TGG | - | tig0025962:16263-16282 | Msa1426270:CDS | 30.0% |
| GTGCATTTCTGAATATACTT+TGG | - | tig0025962:16337-16356 | Msa1426270:intron | 30.0% | |
| GTAGAAAAACTAAACCTTGA+AGG | + | tig0025962:16523-16542 | None:intergenic | 30.0% | |
| AAAAACATAGTCCAACACAT+GGG | + | tig0025962:16560-16579 | None:intergenic | 30.0% | |
| AAAAAACATAGTCCAACACA+TGG | + | tig0025962:16561-16580 | None:intergenic | 30.0% | |
| TAGGGAGATTGAAATTAATG+AGG | + | tig0025962:16614-16633 | None:intergenic | 30.0% | |
| !! | AATCAAAGGCATCTATATTC+AGG | + | tig0025962:16674-16693 | None:intergenic | 30.0% |
| GTGTAAATTTATAGTGTGTG+TGG | - | tig0025962:16953-16972 | Msa1426270:intron | 30.0% | |
| ATTTATAGTGTGTGTGGTTA+AGG | - | tig0025962:16959-16978 | Msa1426270:intron | 30.0% | |
| TTAGCATTAATTGGAAGAAG+AGG | + | tig0025962:17081-17100 | None:intergenic | 30.0% | |
| CAACTTATGAAACAGTTGTT+TGG | - | tig0025962:17778-17797 | Msa1426270:intron | 30.0% | |
| ! | TGCTTTTATGTGCATTACAA+TGG | - | tig0025962:18592-18611 | Msa1426270:intron | 30.0% |
| GAATAATTCCAAGTCTTTAG+GGG | + | tig0025962:18642-18661 | None:intergenic | 30.0% | |
| !! | TTATTGATTGGCCTATAATC+CGG | - | tig0025962:18676-18695 | Msa1426270:intron | 30.0% |
| TGTGAAAATAACCGGATTAT+AGG | + | tig0025962:18690-18709 | None:intergenic | 30.0% | |
| CAGAAGATACAATAATCTTC+TGG | + | tig0025962:18794-18813 | None:intergenic | 30.0% | |
| ! | GTCTATTTATCTTTTGACAG+TGG | + | tig0025962:18848-18867 | None:intergenic | 30.0% |
| AAATAGACATGTTTCGATTC+AGG | - | tig0025962:18860-18879 | Msa1426270:intron | 30.0% | |
| AATAGACATGTTTCGATTCA+GGG | - | tig0025962:18861-18880 | Msa1426270:intron | 30.0% | |
| CAATTAAGGTTGGGAAAACA+CGG | + | tig0025962:14672-14691 | None:intergenic | 35.0% | |
| CACACAAGTGTAATCAAATG+TGG | + | tig0025962:15205-15224 | None:intergenic | 35.0% | |
| TATATGAAGATGACCGAGAA+AGG | + | tig0025962:15384-15403 | None:intergenic | 35.0% | |
| TATTGTGTAGGTATGAAGAG+GGG | - | tig0025962:15514-15533 | Msa1426270:three_prime_UTR | 35.0% | |
| TTATCTTTCAGTTGTGATGG+AGG | - | tig0025962:15737-15756 | Msa1426270:intron | 35.0% | |
| ATGTATGATAGCAGAAACCT+TGG | - | tig0025962:15863-15882 | Msa1426270:intron | 35.0% | |
| TGTATGATAGCAGAAACCTT+GGG | - | tig0025962:15864-15883 | Msa1426270:intron | 35.0% | |
| GCAGATTCATCAAAACGAAT+GGG | + | tig0025962:16021-16040 | None:intergenic | 35.0% | |
| TGCAGATTCATCAAAACGAA+TGG | + | tig0025962:16022-16041 | None:intergenic | 35.0% | |
| !! | ATTCGTTTTGATGAATCTGC+AGG | - | tig0025962:16021-16040 | Msa1426270:CDS | 35.0% |
| ! | AACAGGTCTCAATTTTTCAC+AGG | + | tig0025962:16075-16094 | None:intergenic | 35.0% |
| AAATGGCTACAATAGTGCAT+AGG | + | tig0025962:16121-16140 | None:intergenic | 35.0% | |
| !!! | CTTTAGTTTTACGACTGTTG+TGG | + | tig0025962:16206-16225 | None:intergenic | 35.0% |
| ACAAAATCTGATTGAAGCGT+TGG | + | tig0025962:16308-16327 | None:intergenic | 35.0% | |
| GAAAATGCAGGGAAATTTCA+TGG | + | tig0025962:16378-16397 | None:intergenic | 35.0% | |
| !! | TGAACATTTGTTGTGTGTAC+AGG | - | tig0025962:16434-16453 | Msa1426270:CDS | 35.0% |
| GGAACTCTCAAATATGTGAT+TGG | + | tig0025962:16499-16518 | None:intergenic | 35.0% | |
| GAAAAACTAAACCTTGAAGG+AGG | + | tig0025962:16520-16539 | None:intergenic | 35.0% | |
| !!! | TGGACTATGTTTTTTCAGCT+AGG | - | tig0025962:16566-16585 | Msa1426270:intron | 35.0% |
| ATCTACAATTGTGTGCAGTA+GGG | + | tig0025962:16632-16651 | None:intergenic | 35.0% | |
| AATCTACAATTGTGTGCAGT+AGG | + | tig0025962:16633-16652 | None:intergenic | 35.0% | |
| AGCTAGCTGCTCTTAATAAA+AGG | - | tig0025962:17129-17148 | Msa1426270:CDS | 35.0% | |
| !! | ATCGAGTTGGTAAGTTGTAT+TGG | - | tig0025962:17165-17184 | Msa1426270:intron | 35.0% |
| CATTCACCTTATCATACTGA+AGG | + | tig0025962:17220-17239 | None:intergenic | 35.0% | |
| TAAACAACAGATTTGGAGGT+TGG | - | tig0025962:17407-17426 | Msa1426270:intron | 35.0% | |
| !!! | AGGTTGGTTTTGTTCCATTT+AGG | - | tig0025962:17423-17442 | Msa1426270:intron | 35.0% |
| !!! | GGTTGGTTTTGTTCCATTTA+GGG | - | tig0025962:17424-17443 | Msa1426270:intron | 35.0% |
| TCCATTTAGGGATTTGTGAA+AGG | - | tig0025962:17436-17455 | Msa1426270:intron | 35.0% | |
| GTTGATTGCACAATTAAGGA+TGG | + | tig0025962:17677-17696 | None:intergenic | 35.0% | |
| ! | GCATGTTGATTGCACAATTA+AGG | + | tig0025962:17681-17700 | None:intergenic | 35.0% |
| GAAATAACAATGTGGCAAGT+TGG | + | tig0025962:17733-17752 | None:intergenic | 35.0% | |
| !!! | TCTATGTTTTGATGGAACGT+TGG | - | tig0025962:17753-17772 | Msa1426270:intron | 35.0% |
| TTTCAGTATCACATAGGTAG+CGG | - | tig0025962:17882-17901 | Msa1426270:intron | 35.0% | |
| ! | TGACAAAATATTGGCTGTCA+AGG | + | tig0025962:18042-18061 | None:intergenic | 35.0% |
| ! | ATTTTGTCATTCCTTTGTGG+AGG | - | tig0025962:18053-18072 | Msa1426270:intron | 35.0% |
| ! | TTTTGTCATTCCTTTGTGGA+GGG | - | tig0025962:18054-18073 | Msa1426270:intron | 35.0% |
| GCAACTAAGCTATATTGTGT+TGG | + | tig0025962:18226-18245 | None:intergenic | 35.0% | |
| ! | TCTTTAGGGGTAACAATGAA+TGG | + | tig0025962:18629-18648 | None:intergenic | 35.0% |
| ! | CTAGCATGTTGCTTATTGAT+TGG | - | tig0025962:18664-18683 | Msa1426270:intron | 35.0% |
| CCTAATGTAGTAATGTGATC+AGG | + | tig0025962:18892-18911 | None:intergenic | 35.0% | |
| CCTGATCACATTACTACATT+AGG | - | tig0025962:18889-18908 | Msa1426270:intron | 35.0% | |
| ! | TCAAGGGTTCTTAGTTTGAT+GGG | - | tig0025962:18953-18972 | Msa1426270:intron | 35.0% |
| GATTGAGAGAAGAAAGGAAG+AGG | + | tig0025962:14594-14613 | None:intergenic | 40.0% | |
| ! | TCCCTCTTTTCCCTTTTATC+TGG | - | tig0025962:14645-14664 | Msa1426270:three_prime_UTR | 40.0% |
| CCCAGATAAAAGGGAAAAGA+GGG | + | tig0025962:14649-14668 | None:intergenic | 40.0% | |
| ! | CCCTCTTTTCCCTTTTATCT+GGG | - | tig0025962:14646-14665 | Msa1426270:three_prime_UTR | 40.0% |
| AAAACACGGCCCAGATAAAA+GGG | + | tig0025962:14658-14677 | None:intergenic | 40.0% | |
| ! | CGTGTTTTCCCAACCTTAAT+TGG | - | tig0025962:14670-14689 | Msa1426270:three_prime_UTR | 40.0% |
| TGTGCAAAGGAAGAGATTGT+GGG | - | tig0025962:14856-14875 | Msa1426270:three_prime_UTR | 40.0% | |
| TACTGTACGACTCAACAGAA+GGG | + | tig0025962:15245-15264 | None:intergenic | 40.0% | |
| ATACTGTACGACTCAACAGA+AGG | + | tig0025962:15246-15265 | None:intergenic | 40.0% | |
| TCTGTTGAGTCGTACAGTAT+CGG | - | tig0025962:15246-15265 | Msa1426270:intron | 40.0% | |
| AACGAGAGATGTATCCTTTC+TGG | - | tig0025962:15346-15365 | Msa1426270:intron | 40.0% | |
| ACGAGAGATGTATCCTTTCT+GGG | - | tig0025962:15347-15366 | Msa1426270:intron | 40.0% | |
| GGTCATGATGTATCCTTTCT+CGG | - | tig0025962:15368-15387 | Msa1426270:intron | 40.0% | |
| GATTGTGCATACACTGCAAT+TGG | - | tig0025962:15687-15706 | Msa1426270:CDS | 40.0% | |
| AAGATAGTAACTGAGGCATG+TGG | - | tig0025962:15887-15906 | Msa1426270:intron | 40.0% | |
| ! | TAACTGTGACGGTTCGATTT+TGG | - | tig0025962:16232-16251 | Msa1426270:intron | 40.0% |
| GGGAAATTTCATGGCACAAA+AGG | + | tig0025962:16369-16388 | None:intergenic | 40.0% | |
| !! | CATTTGTTGTGTGTACAGGT+TGG | - | tig0025962:16438-16457 | Msa1426270:CDS | 40.0% |
| GGCTTACCTCTTCTTAATCT+TGG | - | tig0025962:16459-16478 | Msa1426270:CDS | 40.0% | |
| ACCTCTTCTTAATCTTGGTG+TGG | - | tig0025962:16464-16483 | Msa1426270:CDS | 40.0% | |
| TCCACACCAAGATTAAGAAG+AGG | + | tig0025962:16468-16487 | None:intergenic | 40.0% | |
| ATTTGAGAGTTCCTCCTTCA+AGG | - | tig0025962:16506-16525 | Msa1426270:intron | 40.0% | |
| AACACATGGGTGAAGAAATG+AGG | + | tig0025962:16547-16566 | None:intergenic | 40.0% | |
| TCATTTCTTCACCCATGTGT+TGG | - | tig0025962:16546-16565 | Msa1426270:intron | 40.0% | |
| AGATTAGTGTTTGCTCCAGT+TGG | - | tig0025962:16648-16667 | Msa1426270:intron | 40.0% | |
| TGTTGACGCAAACTTTCTGA+TGG | - | tig0025962:16841-16860 | Msa1426270:intron | 40.0% | |
| GCTGCTCTTAATAAAAGGCT+AGG | - | tig0025962:17134-17153 | Msa1426270:CDS | 40.0% | |
| TTATCATACTGAAGGTGAGG+AGG | + | tig0025962:17212-17231 | None:intergenic | 40.0% | |
| TCCTCACCTTCAGTATGATA+AGG | - | tig0025962:17211-17230 | Msa1426270:intron | 40.0% | |
| ACCTTATCATACTGAAGGTG+AGG | + | tig0025962:17215-17234 | None:intergenic | 40.0% | |
| GCCTTTCACAAATCCCTAAA+TGG | + | tig0025962:17440-17459 | None:intergenic | 40.0% | |
| AAAGCCAACCTTTGATCAGA+GGG | - | tig0025962:17604-17623 | Msa1426270:intron | 40.0% | |
| !! | TAGAGCATTGAGCTAAGGAA+TGG | - | tig0025962:17945-17964 | Msa1426270:intron | 40.0% |
| TTTGTCATTCCTTTGTGGAG+GGG | - | tig0025962:18055-18074 | Msa1426270:intron | 40.0% | |
| CATTGAGAGTCAGAAAAGGT+TGG | + | tig0025962:18201-18220 | None:intergenic | 40.0% | |
| GGAACATTGAGAGTCAGAAA+AGG | + | tig0025962:18205-18224 | None:intergenic | 40.0% | |
| ! | GGTGACCTCTTTTCTGTTAA+AGG | + | tig0025962:18444-18463 | None:intergenic | 40.0% |
| CTCTATCAGATCATGACTGA+TGG | - | tig0025962:18480-18499 | Msa1426270:intron | 40.0% | |
| AGATCATGACTGATGGAAGA+CGG | - | tig0025962:18487-18506 | Msa1426270:intron | 40.0% | |
| CATTGTTACCCCTAAAGACT+TGG | - | tig0025962:18631-18650 | Msa1426270:intron | 40.0% | |
| TTGCAGATTGCAGTAAAGTC+TGG | - | tig0025962:18726-18745 | Msa1426270:CDS | 40.0% | |
| AATTTAAGCCAGCAATGCTC+AGG | + | tig0025962:18823-18842 | None:intergenic | 40.0% | |
| CATCAAACTAAGAACCCTTG+AGG | + | tig0025962:18954-18973 | None:intergenic | 40.0% | |
| ! | CTCAAGGGTTCTTAGTTTGA+TGG | - | tig0025962:18952-18971 | Msa1426270:intron | 40.0% |
| GAGAGAAGAAAGGAAGAGGT+CGG | + | tig0025962:14590-14609 | None:intergenic | 45.0% | |
| GCCCAGATAAAAGGGAAAAG+AGG | + | tig0025962:14650-14669 | None:intergenic | 45.0% | |
| GAAAACACGGCCCAGATAAA+AGG | + | tig0025962:14659-14678 | None:intergenic | 45.0% | |
| TACCATCCAGATGTGTGCAA+AGG | - | tig0025962:14843-14862 | Msa1426270:three_prime_UTR | 45.0% | |
| TTCCTTTGCACACATCTGGA+TGG | + | tig0025962:14848-14867 | None:intergenic | 45.0% | |
| TCTCTTCCTTTGCACACATC+TGG | + | tig0025962:14852-14871 | None:intergenic | 45.0% | |
| GTGTGCAAAGGAAGAGATTG+TGG | - | tig0025962:14855-14874 | Msa1426270:three_prime_UTR | 45.0% | |
| GTGCAAAGGAAGAGATTGTG+GGG | - | tig0025962:14857-14876 | Msa1426270:three_prime_UTR | 45.0% | |
| GCAGTTTCACTTGATCAACG+AGG | - | tig0025962:14881-14900 | Msa1426270:intron | 45.0% | |
| GGATACATCATGACCCAGAA+AGG | + | tig0025962:15363-15382 | None:intergenic | 45.0% | |
| CCTCAGTTACTATCTTCCCA+AGG | + | tig0025962:15883-15902 | None:intergenic | 45.0% | |
| CCTTGGGAAGATAGTAACTG+AGG | - | tig0025962:15880-15899 | Msa1426270:intron | 45.0% | |
| GCATCTATATTCAGGCCAAC+TGG | + | tig0025962:16666-16685 | None:intergenic | 45.0% | |
| ! | GAGCGGCATGCTGAATTTTA+TGG | + | tig0025962:16726-16745 | None:intergenic | 45.0% |
| TGGAAGAAGAGGTTGCAGAA+GGG | + | tig0025962:17070-17089 | None:intergenic | 45.0% | |
| TTGGAAGAAGAGGTTGCAGA+AGG | + | tig0025962:17071-17090 | None:intergenic | 45.0% | |
| ATGAAGAGTAGGCACATTGC+TGG | - | tig0025962:17309-17328 | Msa1426270:intron | 45.0% | |
| TGAAGAGTAGGCACATTGCT+GGG | - | tig0025962:17310-17329 | Msa1426270:intron | 45.0% | |
| TGATCAAAGATATGCCCGCT+TGG | - | tig0025962:17529-17548 | Msa1426270:intron | 45.0% | |
| GGTGAGAATAGTCGCTACTT+TGG | - | tig0025962:17576-17595 | Msa1426270:intron | 45.0% | |
| GAAAGCCAACCTTTGATCAG+AGG | - | tig0025962:17603-17622 | Msa1426270:intron | 45.0% | |
| TTTGATCAGAGGGCAGATGA+GGG | - | tig0025962:17614-17633 | Msa1426270:intron | 45.0% | |
| ! | ATGTGGCAAGTTGGCAACAA+AGG | + | tig0025962:17724-17743 | None:intergenic | 45.0% |
| ! | CACATAGGTAGCGGTCATAT+TGG | - | tig0025962:17891-17910 | Msa1426270:intron | 45.0% |
| !! | CTTGCTAGAGCATTGAGCTA+AGG | - | tig0025962:17940-17959 | Msa1426270:intron | 45.0% |
| TAATCACTTCCCCTCCACAA+AGG | + | tig0025962:18067-18086 | None:intergenic | 45.0% | |
| GAGTCAGAAAAGGTTGGAAG+AGG | + | tig0025962:18195-18214 | None:intergenic | 45.0% | |
| TAACAGAAAAGAGGTCACCG+TGG | - | tig0025962:18445-18464 | Msa1426270:intron | 45.0% | |
| AACAGAAAAGAGGTCACCGT+GGG | - | tig0025962:18446-18465 | Msa1426270:intron | 45.0% | |
| TAGGGCAAGCAAATTCCTCA+AGG | - | tig0025962:18936-18955 | Msa1426270:intron | 45.0% | |
| AGGGCAAGCAAATTCCTCAA+GGG | - | tig0025962:18937-18956 | Msa1426270:intron | 45.0% | |
| CTAAGACTGAGACTTGTGTG+CGG | - | tig0025962:18993-19012 | Msa1426270:exon | 45.0% | |
| !!! | ATAAAATATATATTAGTTTT+TGG | - | tig0025962:18402-18421 | Msa1426270:intron | 5.0% |
| GTCGGATGAGAGAAGAGAAG+GGG | + | tig0025962:14572-14591 | None:intergenic | 50.0% | |
| GGTCGGATGAGAGAAGAGAA+GGG | + | tig0025962:14573-14592 | None:intergenic | 50.0% | |
| AGGTCGGATGAGAGAAGAGA+AGG | + | tig0025962:14574-14593 | None:intergenic | 50.0% | |
| CTAGGAACGTCTGATCGAGT+TGG | - | tig0025962:17152-17171 | Msa1426270:intron | 50.0% | |
| GTGAGGAGGAATGAGGAAAC+AGG | + | tig0025962:17198-17217 | None:intergenic | 50.0% | |
| ACTGAAGGTGAGGAGGAATG+AGG | + | tig0025962:17205-17224 | None:intergenic | 50.0% | |
| CAAAGATATGCCCGCTTGGA+CGG | - | tig0025962:17533-17552 | Msa1426270:intron | 50.0% | |
| AAAGATATGCCCGCTTGGAC+GGG | - | tig0025962:17534-17553 | Msa1426270:intron | 50.0% | |
| TCTCACCGCCATCCAGTAAA+TGG | + | tig0025962:17563-17582 | None:intergenic | 50.0% | |
| TCTGCCCTCTGATCAAAGGT+TGG | + | tig0025962:17611-17630 | None:intergenic | 50.0% | |
| CTCATCTGCCCTCTGATCAA+AGG | + | tig0025962:17615-17634 | None:intergenic | 50.0% | |
| CTTTGATCAGAGGGCAGATG+AGG | - | tig0025962:17613-17632 | Msa1426270:intron | 50.0% | |
| ! | AGGTAGCGGTCATATTGGAG+TGG | - | tig0025962:17896-17915 | Msa1426270:intron | 50.0% |
| ! | TGCAAAGACCTGAGCATTGC+TGG | - | tig0025962:18812-18831 | Msa1426270:intron | 50.0% |
| GGATGAGAGAAGAGAAGGGG+AGG | + | tig0025962:14569-14588 | None:intergenic | 55.0% | |
| TAAATGGCGTCCCGTCCAAG+CGG | + | tig0025962:17547-17566 | None:intergenic | 55.0% | |
| TTGGACGGGACGCCATTTAC+TGG | - | tig0025962:17548-17567 | Msa1426270:intron | 55.0% | |
| ACGGGACGCCATTTACTGGA+TGG | - | tig0025962:17552-17571 | Msa1426270:intron | 55.0% | |
| GGACGCCATTTACTGGATGG+CGG | - | tig0025962:17555-17574 | Msa1426270:intron | 55.0% | |
| AAAAGAGGTCACCGTGGGAG+CGG | - | tig0025962:18451-18470 | Msa1426270:intron | 55.0% | |
| CTGAGACTTGTGTGCGGCAA+TGG | - | tig0025962:18999-19018 | Msa1426270:five_prime_UTR | 55.0% | |
| GTGCTGCAGCGGCCATTCAT+TGG | + | tig0025962:17048-17067 | None:intergenic | 60.0% | |
| !! | GTTGCAGAAGGGTGCTGCAG+CGG | + | tig0025962:17059-17078 | None:intergenic | 60.0% |
| AAATGGCGTCCCGTCCAAGC+GGG | + | tig0025962:17546-17565 | None:intergenic | 60.0% | |
| TAGAGTTCACGCCGCTCCCA+CGG | + | tig0025962:18465-18484 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025962 | gene | 14548 | 19069 | 14548 | ID=Msa1426270;Name=Msa1426270 |
| tig0025962 | mRNA | 14548 | 19069 | 14548 | ID=Msa1426270-mRNA-1;Parent=Msa1426270;Name=Msa1426270-mRNA-1;_AED=0.30;_eAED=0.30;_QI=74|0.77|0.9|1|0.55|0.7|10|491|168 |
| tig0025962 | exon | 14548 | 14885 | 14548 | ID=Msa1426270-mRNA-1:exon:4852;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 15092 | 15166 | 15092 | ID=Msa1426270-mRNA-1:exon:4851;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 15511 | 15569 | 15511 | ID=Msa1426270-mRNA-1:exon:4850;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 15651 | 15729 | 15651 | ID=Msa1426270-mRNA-1:exon:4849;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 15982 | 16103 | 15982 | ID=Msa1426270-mRNA-1:exon:4848;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 16257 | 16320 | 16257 | ID=Msa1426270-mRNA-1:exon:4847;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 16385 | 16486 | 16385 | ID=Msa1426270-mRNA-1:exon:4846;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 17090 | 17161 | 17090 | ID=Msa1426270-mRNA-1:exon:4845;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 18706 | 18774 | 18706 | ID=Msa1426270-mRNA-1:exon:4844;Parent=Msa1426270-mRNA-1 |
| tig0025962 | exon | 18978 | 19069 | 18978 | ID=Msa1426270-mRNA-1:exon:4843;Parent=Msa1426270-mRNA-1 |
| tig0025962 | five_prime_UTR | 18996 | 19069 | 18996 | ID=Msa1426270-mRNA-1:five_prime_utr;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 18978 | 18995 | 18978 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 18706 | 18774 | 18706 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 17090 | 17161 | 17090 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 16385 | 16486 | 16385 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 16257 | 16320 | 16257 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 15982 | 16103 | 15982 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | CDS | 15670 | 15729 | 15670 | ID=Msa1426270-mRNA-1:cds;Parent=Msa1426270-mRNA-1 |
| tig0025962 | three_prime_UTR | 15651 | 15669 | 15651 | ID=Msa1426270-mRNA-1:three_prime_utr;Parent=Msa1426270-mRNA-1 |
| tig0025962 | three_prime_UTR | 15511 | 15569 | 15511 | ID=Msa1426270-mRNA-1:three_prime_utr;Parent=Msa1426270-mRNA-1 |
| tig0025962 | three_prime_UTR | 15092 | 15166 | 15092 | ID=Msa1426270-mRNA-1:three_prime_utr;Parent=Msa1426270-mRNA-1 |
| tig0025962 | three_prime_UTR | 14548 | 14885 | 14548 | ID=Msa1426270-mRNA-1:three_prime_utr;Parent=Msa1426270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
