AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1397960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397960 MtrunA17_Chr3g0136601 97.260 949 26 0 1 949 1 949 0.0 1915
Msa1397960 MtrunA17_Chr1g0150511 70.010 1017 226 17 1 948 5 1011 0.0 1372
Msa1397960 MtrunA17_Chr1g0150531 75.377 398 87 3 39 435 2 389 0.0 604
Msa1397960 MtrunA17_Chr3g0122391 28.595 612 373 13 373 949 443 1025 1.33e-53 203
Msa1397960 MtrunA17_Chr8g0377481 36.232 276 165 4 373 646 395 661 5.59e-39 157
Msa1397960 MtrunA17_Chr8g0377481 31.034 145 80 2 805 948 842 967 3.32e-15 80.5
Msa1397960 MtrunA17_Chr8g0392301 34.564 298 174 5 373 652 386 680 1.48e-35 146
Msa1397960 MtrunA17_Chr8g0392301 32.877 146 85 3 805 949 862 995 7.22e-17 85.9
Msa1397960 MtrunA17_Chr5g0447641 34.043 282 169 7 373 646 620 892 2.86e-35 145
Msa1397960 MtrunA17_Chr5g0447641 35.115 131 77 2 805 934 1075 1198 9.22e-15 79.3
Msa1397960 MtrunA17_Chr4g0013831 31.778 343 179 11 331 665 300 595 2.79e-34 141
Msa1397960 MtrunA17_Chr7g0269631 34.130 293 146 8 375 664 349 597 6.14e-33 136
Msa1397960 MtrunA17_Chr8g0371601 31.250 272 166 5 373 642 474 726 4.99e-27 119
Msa1397960 MtrunA17_Chr8g0371601 29.775 178 82 3 785 944 1010 1162 5.92e-13 73.2
Msa1397960 MtrunA17_Chr5g0405701 32.014 278 168 5 373 648 512 770 1.48e-25 114
Msa1397960 MtrunA17_Chr1g0197591 28.571 315 184 11 344 646 363 648 5.92e-19 92.8
Msa1397960 MtrunA17_Chr1g0194741 27.302 315 178 13 335 628 368 652 1.13e-13 75.1
Msa1397960 MtrunA17_Chr1g0190021 26.531 196 128 5 331 515 327 517 1.03e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397960 AT5G10720.1 58.368 968 332 14 1 948 5 921 0.0 1096
Msa1397960 AT1G27320.1 37.545 277 158 5 373 646 453 717 2.49e-40 162
Msa1397960 AT1G27320.1 30.345 145 93 2 805 948 891 1028 5.87e-15 80.1
Msa1397960 AT5G10680.2 46.429 168 83 4 1 168 1 161 1.90e-38 144
Msa1397960 AT5G10680.1 46.429 168 83 4 1 168 1 161 1.90e-38 144
Msa1397960 AT2G01830.2 35.192 287 166 6 373 646 475 754 1.69e-36 149
Msa1397960 AT2G01830.2 32.075 159 87 4 778 934 918 1057 1.15e-13 76.3
Msa1397960 AT2G01830.5 35.192 287 166 6 373 646 464 743 1.98e-36 149
Msa1397960 AT2G01830.5 32.075 159 87 4 778 934 907 1046 1.27e-13 75.9
Msa1397960 AT2G01830.1 35.192 287 166 6 373 646 452 731 2.17e-36 149
Msa1397960 AT2G01830.1 32.075 159 87 4 778 934 895 1034 1.18e-13 75.9
Msa1397960 AT2G01830.4 35.192 287 166 6 373 646 452 731 2.17e-36 149
Msa1397960 AT2G01830.4 32.075 159 87 4 778 934 895 1034 1.18e-13 75.9
Msa1397960 AT2G01830.6 35.192 287 166 6 373 646 452 731 2.17e-36 149
Msa1397960 AT2G01830.6 32.075 159 87 4 778 934 895 1034 1.18e-13 75.9
Msa1397960 AT2G01830.3 35.192 287 166 6 373 646 452 731 2.17e-36 149
Msa1397960 AT2G01830.3 32.075 159 87 4 778 934 895 1034 1.18e-13 75.9
Msa1397960 AT5G35750.1 36.879 282 160 8 373 646 590 861 1.13e-35 147
Msa1397960 AT5G35750.1 35.878 131 76 3 805 934 1036 1159 1.96e-14 78.6
Msa1397960 AT2G40940.1 32.110 327 173 9 330 648 298 583 1.34e-29 125
Msa1397960 AT2G17820.1 31.655 278 169 4 373 648 501 759 1.87e-27 120
Msa1397960 AT1G66340.1 27.628 333 186 7 331 655 299 584 2.43e-27 119
Msa1397960 AT2G47430.1 29.022 317 197 10 341 646 366 665 9.53e-23 105
Msa1397960 AT5G26594.1 33.099 142 61 4 802 940 16 126 1.88e-11 63.2

Find 158 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGCTCCTGTTGTTAT+TGG 0.154518 tig0022238:+20310 Msa1397960:CDS
CTCACAAATTTCACAGAAAA+AGG 0.181280 tig0022238:+19812 Msa1397960:CDS
ATATAGAAACCGGTCGTTTA+TGG 0.218811 tig0022238:-20003 None:intergenic
CAATTCCAACCTCCCAATTT+AGG 0.220850 tig0022238:+23008 Msa1397960:CDS
CAATACATAGTTTATTTAAA+AGG 0.226595 tig0022238:+22559 Msa1397960:CDS
TAAACGACCGGTTTCTATAT+TGG 0.230609 tig0022238:+20006 Msa1397960:CDS
GCTAAGGAAGTTGGAGATAT+TGG 0.232044 tig0022238:+19946 Msa1397960:CDS
TGGATGATATTTATGATATA+TGG 0.239075 tig0022238:+20026 Msa1397960:CDS
AGAGACTAGATGGCCTAAAT+TGG 0.246731 tig0022238:-23021 None:intergenic
GCTTGAAGACCATCCATAAT+TGG 0.260574 tig0022238:-23690 None:intergenic
GAGATAAGATCTCCACTTTC+TGG 0.266189 tig0022238:+21101 Msa1397960:CDS
CAATAACAACAGGAGCATTT+TGG 0.278884 tig0022238:-20309 None:intergenic
CATCCTGTCTTTGTTTGTTT+AGG 0.281414 tig0022238:-19919 None:intergenic
GCCTTCATTTGTAAATTTGA+TGG 0.281976 tig0022238:-22108 None:intergenic
AAACTTCCCTCTTAAAATCT+TGG 0.284644 tig0022238:-20539 None:intergenic
AACATAGATGTTGTCAATAA+TGG 0.290513 tig0022238:+23440 Msa1397960:CDS
TACCTCTCTAGGTCGAAATT+TGG 0.290931 tig0022238:-21637 None:intergenic
GGATGTGTGCATGCCAATTA+TGG 0.314902 tig0022238:+23677 Msa1397960:intron
AACATATCTTGATCATTTCC+TGG 0.315890 tig0022238:-19728 None:intergenic
GGGTAGACTTTGCTCGATTC+CGG 0.321938 tig0022238:-23769 None:intergenic
CATGTTGTCATCTGGAGATT+TGG 0.337835 tig0022238:+21193 Msa1397960:CDS
ATCTGCTACATGTCCTTCTA+TGG 0.343030 tig0022238:-21709 None:intergenic
GATCTTTCCAAGGTTGAATC+AGG 0.345581 tig0022238:+21242 Msa1397960:CDS
GTGAGTTCTGTTTGCTCCAC+TGG 0.347782 tig0022238:-23045 None:intergenic
AAGAATCTGCAATACCATTC+TGG 0.355194 tig0022238:-23262 None:intergenic
TTGGCTCTTGCACAACATAA+AGG 0.355853 tig0022238:-22145 None:intergenic
AGTTGATGATTCAAATTCAT+TGG 0.362860 tig0022238:+23163 Msa1397960:CDS
ATGGGAATTCGCTTTGTAGA+TGG 0.376345 tig0022238:-23816 None:intergenic
AGAGTGTGTTGAGGATATTA+TGG 0.378342 tig0022238:+19631 Msa1397960:CDS
TTTCACTACATTCACAGAAA+TGG 0.384669 tig0022238:-22216 None:intergenic
GTAGATCACGCTCGAAAGTA+TGG 0.384965 tig0022238:+22597 Msa1397960:CDS
CATTCGTAATTGCAGGTCAT+TGG 0.389666 tig0022238:+21871 Msa1397960:intron
CAGAAAATATTAACCATAGA+AGG 0.390045 tig0022238:+21696 Msa1397960:CDS
AATAAAACCATTCACATAAC+AGG 0.395118 tig0022238:+20933 Msa1397960:CDS
TGCAGATTCTTCTCAGCATA+TGG 0.396404 tig0022238:+23274 Msa1397960:CDS
TTCAAGCAACAAAACTAATT+CGG 0.398524 tig0022238:+23706 Msa1397960:CDS
AAATGTGTCATCACCTCTAT+AGG 0.404208 tig0022238:-21738 None:intergenic
CTAAATTGGGAGGTTGGAAT+TGG 0.404734 tig0022238:-23007 None:intergenic
CAATCAACCTGTTATGTGAA+TGG 0.404844 tig0022238:-20940 None:intergenic
TCCTGTTGTTATTGGCCATC+AGG 0.408491 tig0022238:+20318 Msa1397960:CDS
GCCATCAAATTTACAAATGA+AGG 0.414139 tig0022238:+22107 Msa1397960:CDS
TTTACAAATGAAGGCAAAGT+AGG 0.421277 tig0022238:+22116 Msa1397960:CDS
GTGTCTAGCAAAGAACAAAA+TGG 0.421334 tig0022238:+22855 Msa1397960:CDS
TATACTCCCAATGTTTCATA+AGG 0.422050 tig0022238:-19853 None:intergenic
TTCTGCATAGGTTGAGTTGA+TGG 0.425115 tig0022238:+22818 Msa1397960:intron
TTGGATGTCATGTTGTCATC+TGG 0.426050 tig0022238:+21185 Msa1397960:CDS
AGCAAGGCAGGTGAAACAAT+TGG 0.429476 tig0022238:+20654 Msa1397960:CDS
ATCGAGCATTCACTCTTAAC+CGG 0.430609 tig0022238:-22275 None:intergenic
CAAGCGATCGAGACCTTGTA+TGG 0.430770 tig0022238:-22900 None:intergenic
TCAATGTGGCCAGAAGATAT+TGG 0.430983 tig0022238:+19671 Msa1397960:CDS
ACATCAGTTCCAATATCTTC+TGG 0.433001 tig0022238:-19680 None:intergenic
TCACCTGCCTTGCTGAAGAC+AGG 0.433507 tig0022238:-20645 None:intergenic
GCTCGAAAGTATGGTGGGAC+AGG 0.435553 tig0022238:+22606 Msa1397960:CDS
ATATCTTCTGGCCACATTGA+AGG 0.436714 tig0022238:-19668 None:intergenic
AGCGTACAAAAGATTAGTTC+AGG 0.440570 tig0022238:+22185 Msa1397960:CDS
AAGTATGGTGGGACAGGGCT+AGG 0.445638 tig0022238:+22612 Msa1397960:CDS
GGATGTTGAGCTAAGGAAGT+TGG 0.448739 tig0022238:+19937 Msa1397960:CDS
ACTTTCTGGTGTTGTTAGCA+TGG 0.454583 tig0022238:+21115 Msa1397960:CDS
ATTCACTGGATCTGGTGTTA+AGG 0.458619 tig0022238:+20512 Msa1397960:CDS
TCCAATGACAACATATCAAA+AGG 0.462175 tig0022238:+23131 Msa1397960:CDS
ATATCATCCAATATAGAAAC+CGG 0.463376 tig0022238:-20013 None:intergenic
ATTACCTCCTCATGTAAACT+TGG 0.464486 tig0022238:-20379 None:intergenic
TCCTGATGGCCAATAACAAC+AGG 0.466242 tig0022238:-20319 None:intergenic
CTCCACTGGAAGAGACTAGA+TGG 0.466828 tig0022238:-23031 None:intergenic
GGTTGTGATGTATATGATAC+AGG 0.469429 tig0022238:+22350 Msa1397960:CDS
ACTAGCAATATGCAAACAAC+TGG 0.471382 tig0022238:+22635 Msa1397960:CDS
ACAATATTCATAATCTCGAT+TGG 0.473357 tig0022238:-23790 None:intergenic
AGCCTACCTTATGAAACATT+GGG 0.475348 tig0022238:+19847 Msa1397960:CDS
GAAGATATTGGAACTGATGT+TGG 0.476853 tig0022238:+19683 Msa1397960:CDS
ATTTGAGAGAGTTCTTCAAC+AGG 0.477140 tig0022238:-20250 None:intergenic
GATGCACTTGGAAAAGTTGT+TGG 0.486450 tig0022238:+20150 Msa1397960:CDS
GAGACTAGATGGCCTAAATT+GGG 0.487886 tig0022238:-23020 None:intergenic
TCTTGTTATCTTCAACAAGA+AGG 0.489724 tig0022238:-23373 None:intergenic
ACCTCAACTCTTTGTCCTGA+TGG 0.491700 tig0022238:-20333 None:intergenic
GAACCTGTCTTCAGCAAGGC+AGG 0.495617 tig0022238:+20642 Msa1397960:CDS
ATGACCCAACTGTTTCATCA+TGG 0.497053 tig0022238:-23417 None:intergenic
CACATTCATACTTCCATACA+AGG 0.497367 tig0022238:+22887 Msa1397960:CDS
TAGCCTACCTTATGAAACAT+TGG 0.501009 tig0022238:+19846 Msa1397960:CDS
TTTCCAACCTGATTCAACCT+TGG 0.502835 tig0022238:-21249 None:intergenic
GGGAATGGATGTAACAGATC+AGG 0.507588 tig0022238:+20689 Msa1397960:CDS
CAAGGAGCAAAGACAGCTGT+TGG 0.510482 tig0022238:+21166 Msa1397960:CDS
TGGAATCAATTACATGGGAA+TGG 0.513449 tig0022238:+20674 Msa1397960:CDS
GTCGAAATATTCACTGGATC+TGG 0.516463 tig0022238:+20504 Msa1397960:CDS
AGTATGATACTGTTGTGTAC+TGG 0.516963 tig0022238:+20116 Msa1397960:CDS
GATGGCCTAAATTGGGAGGT+TGG 0.523038 tig0022238:-23013 None:intergenic
AGTGTATTGAACAATACTTA+AGG 0.523347 tig0022238:+24121 Msa1397960:CDS
AACAATTGGAATCAATTACA+TGG 0.523571 tig0022238:+20668 Msa1397960:CDS
AGCAGATGATGTACCTATAG+AGG 0.523933 tig0022238:+21725 Msa1397960:CDS
CAACCTAAACAAACAAAGAC+AGG 0.527200 tig0022238:+19916 Msa1397960:CDS
ATTGGAAGAACATAGATTTG+AGG 0.528522 tig0022238:+19964 Msa1397960:CDS
CTGTGTAGGAGTTATGAAGT+TGG 0.528994 tig0022238:+21608 Msa1397960:intron
ATGCTAACAACACCAGAAAG+TGG 0.529641 tig0022238:-21113 None:intergenic
TCTGCATAGGTTGAGTTGAT+GGG 0.531045 tig0022238:+22819 Msa1397960:intron
CTTTCCAAGTTTACATGAGG+AGG 0.532167 tig0022238:+20375 Msa1397960:CDS
ACTGATGTCGAAATATTCAC+TGG 0.534032 tig0022238:+20498 Msa1397960:CDS
ACATGCTTTACTACCTCTCT+AGG 0.534889 tig0022238:-21648 None:intergenic
GATGTATATGATACAGGCAT+TGG 0.535140 tig0022238:+22356 Msa1397960:CDS
CAATATTCATAATCTCGATT+GGG 0.535165 tig0022238:-23789 None:intergenic
CTCAGATGAATTCTCAGACA+TGG 0.538037 tig0022238:+22938 Msa1397960:CDS
CTAGTGCTTACCGCAACAAT+GGG 0.538212 tig0022238:-23834 None:intergenic
GGCCATCTAGTCTCTTCCAG+TGG 0.542757 tig0022238:+23029 Msa1397960:CDS
ACAATCCATGATGAAACAGT+TGG 0.545179 tig0022238:+23412 Msa1397960:CDS
TCTAGTGCTTACCGCAACAA+TGG 0.547183 tig0022238:-23835 None:intergenic
TAATGATGAGTGTAGATCTC+CGG 0.548746 tig0022238:+22256 Msa1397960:CDS
GAAACATTGGGAGTATAAGC+AGG 0.551772 tig0022238:+19859 Msa1397960:CDS
TGGAGCAGAGGCGGTGCGTG+CGG 0.557895 tig0022238:+23460 Msa1397960:CDS
TTACAAATGAAGGCAAAGTA+GGG 0.560913 tig0022238:+22117 Msa1397960:CDS
TATGTTGTCATTGGAAGTAG+AGG 0.564452 tig0022238:-23123 None:intergenic
TGACATACTTGATCTTTCCA+AGG 0.565536 tig0022238:+21232 Msa1397960:CDS
TACATATGACCTGGTTCTGA+TGG 0.568683 tig0022238:+23493 Msa1397960:CDS
GCACTTGGAAAAGTTGTTGG+AGG 0.568733 tig0022238:+20153 Msa1397960:CDS
GAAACAGCGAGCGATGCACT+TGG 0.570341 tig0022238:+20138 Msa1397960:CDS
CAATCCATGATGAAACAGTT+GGG 0.571813 tig0022238:+23413 Msa1397960:CDS
AGATAACAAGATTAACATCA+TGG 0.572107 tig0022238:+23385 Msa1397960:CDS
CATTATATAGATGATGTTTG+TGG 0.574874 tig0022238:-23226 None:intergenic
TTCCACCACAAAACTTGACA+AGG 0.576173 tig0022238:+21148 Msa1397960:CDS
TATGAGAGCAAAGAAAGTGC+TGG 0.576593 tig0022238:+21064 Msa1397960:CDS
ATGATGCTGCGGCTGTCTGA+AGG 0.579152 tig0022238:-21671 None:intergenic
CCTCATGTAAACTTGGAAAG+TGG 0.579172 tig0022238:-20372 None:intergenic
AGATTTGAGGACGAAAGATA+CGG 0.579302 tig0022238:+19977 Msa1397960:CDS
ATCTATATAATGCTCATGCA+TGG 0.579361 tig0022238:+23237 Msa1397960:CDS
TCTGATGATACAACAACAGA+AGG 0.580893 tig0022238:+22978 Msa1397960:CDS
CCACTTTCCAAGTTTACATG+AGG 0.590769 tig0022238:+20372 Msa1397960:CDS
AAAGACAGGATGTTGAGCTA+AGG 0.596277 tig0022238:+19930 Msa1397960:CDS
CTCGAAAGTATGGTGGGACA+GGG 0.596487 tig0022238:+22607 Msa1397960:CDS
TACCAAATTTCGACCTAGAG+AGG 0.598602 tig0022238:+21635 Msa1397960:CDS
GCTCATGCATGGTTCCAGAA+TGG 0.599781 tig0022238:+23248 Msa1397960:CDS
AAGAGTGAATGCTCGATGAA+CGG 0.601254 tig0022238:+22281 Msa1397960:CDS
GGAGTATAAGCAGGCGAGCG+TGG 0.601381 tig0022238:+19868 Msa1397960:CDS
CAGTTCAATATAGAAAAGCC+AGG 0.602854 tig0022238:+19710 Msa1397960:CDS
GATACAGGCATTGGAATACC+AGG 0.612622 tig0022238:+22365 Msa1397960:CDS
AAAGCGAATTCCCATTGTTG+CGG 0.612866 tig0022238:+23824 Msa1397960:CDS
CTTCTGGCCACATTGAAGGA+AGG 0.613983 tig0022238:-19664 None:intergenic
AATGCAACAACAGTGTGGAT+AGG 0.617754 tig0022238:+22329 Msa1397960:CDS
ACAATTGGAATCAATTACAT+GGG 0.619533 tig0022238:+20669 Msa1397960:CDS
ATCACGCTCGAAAGTATGGT+GGG 0.619892 tig0022238:+22601 Msa1397960:CDS
CATAAATTACCATCAGAACC+AGG 0.627013 tig0022238:-23502 None:intergenic
TGTAGAACCTGTCTTCAGCA+AGG 0.629088 tig0022238:+20638 Msa1397960:CDS
GTGTGCATGCCAATTATGGA+TGG 0.635228 tig0022238:+23681 Msa1397960:CDS
AAATTCTCACAAATTTAACC+AGG 0.643959 tig0022238:+21914 Msa1397960:CDS
CTCCCAATGTTTCATAAGGT+AGG 0.643980 tig0022238:-19849 None:intergenic
GCATAGGTTGAGTTGATGGG+AGG 0.644228 tig0022238:+22822 Msa1397960:intron
TCAGCGCTGTACATATGACC+TGG 0.644473 tig0022238:+23484 Msa1397960:CDS
ATACGGAGGCCATAAACGAC+CGG 0.646119 tig0022238:+19994 Msa1397960:CDS
AGATTCTTCTCAGCATATGG+TGG 0.646433 tig0022238:+23277 Msa1397960:CDS
GATTGCTGTTCAGAAAGCAA+AGG 0.648370 tig0022238:+20899 Msa1397960:CDS
TGTCAATAATGGAGCAGAGG+CGG 0.649552 tig0022238:+23451 Msa1397960:CDS
GAAAATCCACAAAATTTGTG+CGG 0.650564 tig0022238:-23080 None:intergenic
ATGTTGTCATTGGAAGTAGA+GGG 0.650718 tig0022238:-23122 None:intergenic
GATCACGCTCGAAAGTATGG+TGG 0.655464 tig0022238:+22600 Msa1397960:CDS
GCCATCAGGACAAAGAGTTG+AGG 0.656169 tig0022238:+20332 Msa1397960:CDS
TGTTGTCAATAATGGAGCAG+AGG 0.659976 tig0022238:+23448 Msa1397960:CDS
TTGAAGTCCTTCCTTCAATG+TGG 0.668513 tig0022238:+19657 Msa1397960:CDS
ACTAGATGGCCTAAATTGGG+AGG 0.678417 tig0022238:-23017 None:intergenic
ACTCAAATGCAACAACAGTG+TGG 0.687455 tig0022238:+22324 Msa1397960:CDS
CTCGATGAACGGAGACACAG+AGG 0.693267 tig0022238:+22292 Msa1397960:CDS
GTATGGAAGTATGAATGTGA+AGG 0.713387 tig0022238:-22883 None:intergenic
TTTGAGGACGAAAGATACGG+AGG 0.715280 tig0022238:+19980 Msa1397960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTATTTTTTAAATTTT+TGG + tig0022238:20799-20818 Msa1397960:intron 10.0%
!! AATTATTTAAACTTATCTAT+TGG + tig0022238:21313-21332 Msa1397960:intron 10.0%
!!! TTTCTATTATATTTTGTTAT+AGG + tig0022238:21448-21467 Msa1397960:intron 10.0%
!!! TTCTATTATATTTTGTTATA+GGG + tig0022238:21449-21468 Msa1397960:intron 10.0%
!!! AAAACTAATTAATTTGATAG+AGG - tig0022238:20997-21016 None:intergenic 15.0%
!! TTAAATAATTCAATCTAAAC+AGG - tig0022238:21303-21322 None:intergenic 15.0%
!! CAATACATAGTTTATTTAAA+AGG + tig0022238:22559-22578 Msa1397960:CDS 15.0%
!! TGGATGATATTTATGATATA+TGG + tig0022238:20026-20045 Msa1397960:CDS 20.0%
! ATATCATCCAATATAGAAAC+CGG - tig0022238:20016-20035 None:intergenic 25.0%
!! ATTTTCTGTCATCTTTTTTC+AGG + tig0022238:20461-20480 Msa1397960:intron 25.0%
!!! ATCTTTTTTCAGGACATAAT+AGG + tig0022238:20471-20490 Msa1397960:intron 25.0%
! AACAATTGGAATCAATTACA+TGG + tig0022238:20668-20687 Msa1397960:CDS 25.0%
! ACAATTGGAATCAATTACAT+GGG + tig0022238:20669-20688 Msa1397960:CDS 25.0%
! ATGAATCTCTTGAAAAATGT+AGG + tig0022238:20839-20858 Msa1397960:intron 25.0%
! AATAAAACCATTCACATAAC+AGG + tig0022238:20933-20952 Msa1397960:CDS 25.0%
!! TTTCCTCATCTTTTTAATAG+AGG + tig0022238:21037-21056 Msa1397960:intron 25.0%
! TTTCCTCTATTAAAAAGATG+AGG - tig0022238:21043-21062 None:intergenic 25.0%
! CAGAAAATATTAACCATAGA+AGG + tig0022238:21696-21715 Msa1397960:CDS 25.0%
! AAATTCTCACAAATTTAACC+AGG + tig0022238:21914-21933 Msa1397960:CDS 25.0%
! TCACATAAATATTTAGTACC+TGG - tig0022238:21935-21954 None:intergenic 25.0%
! GTAGTGAAAGAAGAAAAATA+TGG + tig0022238:22230-22249 Msa1397960:CDS 25.0%
! TAGTTATAGTAGATAATACC+TGG - tig0022238:22386-22405 None:intergenic 25.0%
! AAACAGAAGAATAGAGATTA+AGG - tig0022238:22438-22457 None:intergenic 25.0%
!! AATTTCTTGTGTAGAGTATT+TGG + tig0022238:22660-22679 Msa1397960:intron 25.0%
! ATAAAATGTAACTTCTGCAT+AGG + tig0022238:22806-22825 Msa1397960:intron 25.0%
!!! AGTTGATGATTCAAATTCAT+TGG + tig0022238:23163-23182 Msa1397960:CDS 25.0%
! CATTATATAGATGATGTTTG+TGG - tig0022238:23229-23248 None:intergenic 25.0%
! AGATAACAAGATTAACATCA+TGG + tig0022238:23385-23404 Msa1397960:CDS 25.0%
! AACATAGATGTTGTCAATAA+TGG + tig0022238:23440-23459 Msa1397960:CDS 25.0%
! AATATATCAATAAGCAGCAT+TGG - tig0022238:23604-23623 None:intergenic 25.0%
! TTCAAGCAACAAAACTAATT+CGG + tig0022238:23706-23725 Msa1397960:CDS 25.0%
! CAATATTCATAATCTCGATT+GGG - tig0022238:23792-23811 None:intergenic 25.0%
! ACAATATTCATAATCTCGAT+TGG - tig0022238:23793-23812 None:intergenic 25.0%
! AGTGTATTGAACAATACTTA+AGG + tig0022238:24121-24140 Msa1397960:CDS 25.0%
AACATATCTTGATCATTTCC+TGG - tig0022238:19731-19750 None:intergenic 30.0%
CTCACAAATTTCACAGAAAA+AGG + tig0022238:19812-19831 Msa1397960:CDS 30.0%
TATACTCCCAATGTTTCATA+AGG - tig0022238:19856-19875 None:intergenic 30.0%
ATTGGAAGAACATAGATTTG+AGG + tig0022238:19964-19983 Msa1397960:CDS 30.0%
!!! ACAACATTACTTTTTCTGCA+AGG - tig0022238:20064-20083 None:intergenic 30.0%
TGTTGAAGCTCTTCTTAAAA+AGG + tig0022238:20411-20430 Msa1397960:intron 30.0%
AAACTTCCCTCTTAAAATCT+TGG - tig0022238:20542-20561 None:intergenic 30.0%
!! AGATTTTAAGAGGGAAGTTT+TGG + tig0022238:20542-20561 Msa1397960:CDS 30.0%
!!! ACTTTTGAGACAGAACTATT+TGG + tig0022238:20594-20613 Msa1397960:CDS 30.0%
! GCAAAAAAGTATATGTATCC+TGG - tig0022238:20751-20770 None:intergenic 30.0%
TGTAGGTTAGAAAAAGAGAA+AGG + tig0022238:20856-20875 Msa1397960:intron 30.0%
!! TCTAATATGGATTGGAAACA+AGG - tig0022238:21280-21299 None:intergenic 30.0%
TAAACAGGTCTAATATGGAT+TGG - tig0022238:21288-21307 None:intergenic 30.0%
CAATCTAAACAGGTCTAATA+TGG - tig0022238:21293-21312 None:intergenic 30.0%
!! ATAAGTTGTTTTCAGCGTAT+CGG + tig0022238:21337-21356 Msa1397960:intron 30.0%
AGCTATCTTAAAGACTTTAC+AGG - tig0022238:21390-21409 None:intergenic 30.0%
! ATCTAGTTTATGTATCACTG+AGG - tig0022238:21549-21568 None:intergenic 30.0%
!!! TTGGTGATGTTTTAAGGATT+CGG + tig0022238:21890-21909 Msa1397960:CDS 30.0%
GCCATCAAATTTACAAATGA+AGG + tig0022238:22107-22126 Msa1397960:CDS 30.0%
GCCTTCATTTGTAAATTTGA+TGG - tig0022238:22111-22130 None:intergenic 30.0%
TTTACAAATGAAGGCAAAGT+AGG + tig0022238:22116-22135 Msa1397960:CDS 30.0%
TTACAAATGAAGGCAAAGTA+GGG + tig0022238:22117-22136 Msa1397960:CDS 30.0%
! ACTAATCTTTTGTACGCTTT+CGG - tig0022238:22183-22202 None:intergenic 30.0%
TTTCACTACATTCACAGAAA+TGG - tig0022238:22219-22238 None:intergenic 30.0%
GAAAATCCACAAAATTTGTG+CGG - tig0022238:23083-23102 None:intergenic 30.0%
TCCAATGACAACATATCAAA+AGG + tig0022238:23131-23150 Msa1397960:CDS 30.0%
! TCCTTTTGATATGTTGTCAT+TGG - tig0022238:23135-23154 None:intergenic 30.0%
ATCTATATAATGCTCATGCA+TGG + tig0022238:23237-23256 Msa1397960:CDS 30.0%
!! AAGGATTTTAGGCTTTGATA+TGG - tig0022238:23357-23376 None:intergenic 30.0%
! TCTTCAACAAGAAGGATTTT+AGG - tig0022238:23368-23387 None:intergenic 30.0%
! TCTTGTTATCTTCAACAAGA+AGG - tig0022238:23376-23395 None:intergenic 30.0%
AATTATTCGTAGAGAGAAAG+TGG - tig0022238:23549-23568 None:intergenic 30.0%
ATTTCATAGTTGCACTTTAC+AGG + tig0022238:23656-23675 Msa1397960:intron 30.0%
! AAAACTAATTCGGTCTTTTG+AGG + tig0022238:23716-23735 Msa1397960:CDS 30.0%
ATCCTTACTATGAATGTCTT+TGG + tig0022238:23964-23983 Msa1397960:intron 30.0%
TCCTTACTATGAATGTCTTT+GGG + tig0022238:23965-23984 Msa1397960:intron 30.0%
! AGAATGTTTTGCTAATGGTA+TGG + tig0022238:24056-24075 Msa1397960:CDS 30.0%
AGAGTGTGTTGAGGATATTA+TGG + tig0022238:19631-19650 Msa1397960:CDS 35.0%
ACATCAGTTCCAATATCTTC+TGG - tig0022238:19683-19702 None:intergenic 35.0%
GAAGATATTGGAACTGATGT+TGG + tig0022238:19683-19702 Msa1397960:CDS 35.0%
CAGTTCAATATAGAAAAGCC+AGG + tig0022238:19710-19729 Msa1397960:CDS 35.0%
TAGCCTACCTTATGAAACAT+TGG + tig0022238:19846-19865 Msa1397960:CDS 35.0%
AGCCTACCTTATGAAACATT+GGG + tig0022238:19847-19866 Msa1397960:CDS 35.0%
CAACCTAAACAAACAAAGAC+AGG + tig0022238:19916-19935 Msa1397960:CDS 35.0%
! CATCCTGTCTTTGTTTGTTT+AGG - tig0022238:19922-19941 None:intergenic 35.0%
AGATTTGAGGACGAAAGATA+CGG + tig0022238:19977-19996 Msa1397960:CDS 35.0%
ATATAGAAACCGGTCGTTTA+TGG - tig0022238:20006-20025 None:intergenic 35.0%
! TAAACGACCGGTTTCTATAT+TGG + tig0022238:20006-20025 Msa1397960:CDS 35.0%
AGTATGATACTGTTGTGTAC+TGG + tig0022238:20116-20135 Msa1397960:CDS 35.0%
ATTTGAGAGAGTTCTTCAAC+AGG - tig0022238:20253-20272 None:intergenic 35.0%
!!! CAATAACAACAGGAGCATTT+TGG - tig0022238:20312-20331 None:intergenic 35.0%
CAAAATGCTCCTGTTGTTAT+TGG + tig0022238:20310-20329 Msa1397960:CDS 35.0%
ATTACCTCCTCATGTAAACT+TGG - tig0022238:20382-20401 None:intergenic 35.0%
ACTGATGTCGAAATATTCAC+TGG + tig0022238:20498-20517 Msa1397960:CDS 35.0%
! AGGAGAACCAAGATTTTAAG+AGG + tig0022238:20532-20551 Msa1397960:CDS 35.0%
!! GGAGAACCAAGATTTTAAGA+GGG + tig0022238:20533-20552 Msa1397960:CDS 35.0%
!!! AAGAGGGAAGTTTTGGAAAA+AGG + tig0022238:20549-20568 Msa1397960:CDS 35.0%
AAAAAGGATTGCCTGCAAAA+AGG + tig0022238:20565-20584 Msa1397960:CDS 35.0%
AAAAGGATTGCCTGCAAAAA+GGG + tig0022238:20566-20585 Msa1397960:CDS 35.0%
! AAAGTGATTTCCCTTTTTGC+AGG - tig0022238:20579-20598 None:intergenic 35.0%
TGGAATCAATTACATGGGAA+TGG + tig0022238:20674-20693 Msa1397960:CDS 35.0%
! GTTACTCCCTACGAAATTTT+TGG + tig0022238:20724-20743 Msa1397960:intron 35.0%
TTGCTTATATATCGTTCCAG+AGG + tig0022238:20767-20786 Msa1397960:intron 35.0%
TGCTTATATATCGTTCCAGA+GGG + tig0022238:20768-20787 Msa1397960:intron 35.0%
GGTTAGAAAAAGAGAAAGGA+TGG + tig0022238:20860-20879 Msa1397960:intron 35.0%
CAATCAACCTGTTATGTGAA+TGG - tig0022238:20943-20962 None:intergenic 35.0%
TGACATACTTGATCTTTCCA+AGG + tig0022238:21232-21251 Msa1397960:CDS 35.0%
! CTACACAGAATGCAGATTTT+GGG - tig0022238:21596-21615 None:intergenic 35.0%
! TATTTTCTGCAATGATGCTG+CGG - tig0022238:21685-21704 None:intergenic 35.0%
AAATGTGTCATCACCTCTAT+AGG - tig0022238:21741-21760 None:intergenic 35.0%
!!! AGGTCATTGGTGATGTTTTA+AGG + tig0022238:21884-21903 Msa1397960:intron 35.0%
ACTTAACTGATACACACTGA+AGG - tig0022238:22026-22045 None:intergenic 35.0%
!!! CTTTCGGGTTTTGTAAAACT+TGG - tig0022238:22167-22186 None:intergenic 35.0%
! CTAATCTTTTGTACGCTTTC+GGG - tig0022238:22182-22201 None:intergenic 35.0%
! AGCGTACAAAAGATTAGTTC+AGG + tig0022238:22185-22204 Msa1397960:CDS 35.0%
TAATGATGAGTGTAGATCTC+CGG + tig0022238:22256-22275 Msa1397960:CDS 35.0%
GGTTGTGATGTATATGATAC+AGG + tig0022238:22350-22369 Msa1397960:CDS 35.0%
GATGTATATGATACAGGCAT+TGG + tig0022238:22356-22375 Msa1397960:CDS 35.0%
ACTAGCAATATGCAAACAAC+TGG + tig0022238:22635-22654 Msa1397960:CDS 35.0%
! GTGTAGAGTATTTGGTTACA+TGG + tig0022238:22668-22687 Msa1397960:intron 35.0%
GTGTCTAGCAAAGAACAAAA+TGG + tig0022238:22855-22874 Msa1397960:CDS 35.0%
! GTATGGAAGTATGAATGTGA+AGG - tig0022238:22886-22905 None:intergenic 35.0%
CACATTCATACTTCCATACA+AGG + tig0022238:22887-22906 Msa1397960:CDS 35.0%
TCTGATGATACAACAACAGA+AGG + tig0022238:22978-22997 Msa1397960:CDS 35.0%
! TTATTGCCGCACAAATTTTG+TGG + tig0022238:23074-23093 Msa1397960:CDS 35.0%
ATGTTGTCATTGGAAGTAGA+GGG - tig0022238:23125-23144 None:intergenic 35.0%
TATGTTGTCATTGGAAGTAG+AGG - tig0022238:23126-23145 None:intergenic 35.0%
AAGAATCTGCAATACCATTC+TGG - tig0022238:23265-23284 None:intergenic 35.0%
ACAATCCATGATGAAACAGT+TGG + tig0022238:23412-23431 Msa1397960:CDS 35.0%
CAATCCATGATGAAACAGTT+GGG + tig0022238:23413-23432 Msa1397960:CDS 35.0%
CATAAATTACCATCAGAACC+AGG - tig0022238:23505-23524 None:intergenic 35.0%
!! CTGGTTCTGATGGTAATTTA+TGG + tig0022238:23503-23522 Msa1397960:intron 35.0%
!! TTTTGAGGAAACAGGCAATT+GGG + tig0022238:23731-23750 Msa1397960:CDS 35.0%
TCCCAAAGACATTCATAGTA+AGG - tig0022238:23969-23988 None:intergenic 35.0%
! GCTGAAGAATGTTTTGCTAA+TGG + tig0022238:24051-24070 Msa1397960:CDS 35.0%
! TTCAATTTTCGTAAACTCGC+AGG - tig0022238:24099-24118 None:intergenic 35.0%
TTGAAGTCCTTCCTTCAATG+TGG + tig0022238:19657-19676 Msa1397960:CDS 40.0%
ATATCTTCTGGCCACATTGA+AGG - tig0022238:19671-19690 None:intergenic 40.0%
TCAATGTGGCCAGAAGATAT+TGG + tig0022238:19671-19690 Msa1397960:CDS 40.0%
CTCCCAATGTTTCATAAGGT+AGG - tig0022238:19852-19871 None:intergenic 40.0%
! GAAACATTGGGAGTATAAGC+AGG + tig0022238:19859-19878 Msa1397960:CDS 40.0%
AAAGACAGGATGTTGAGCTA+AGG + tig0022238:19930-19949 Msa1397960:CDS 40.0%
GCTAAGGAAGTTGGAGATAT+TGG + tig0022238:19946-19965 Msa1397960:CDS 40.0%
GATGCACTTGGAAAAGTTGT+TGG + tig0022238:20150-20169 Msa1397960:CDS 40.0%
CCTCATGTAAACTTGGAAAG+TGG - tig0022238:20375-20394 None:intergenic 40.0%
CCACTTTCCAAGTTTACATG+AGG + tig0022238:20372-20391 Msa1397960:CDS 40.0%
CTTTCCAAGTTTACATGAGG+AGG + tig0022238:20375-20394 Msa1397960:CDS 40.0%
GTCGAAATATTCACTGGATC+TGG + tig0022238:20504-20523 Msa1397960:CDS 40.0%
! ATTCACTGGATCTGGTGTTA+AGG + tig0022238:20512-20531 Msa1397960:CDS 40.0%
CCTGGTCCAAAAATTTCGTA+GGG - tig0022238:20733-20752 None:intergenic 40.0%
TCCTGGTCCAAAAATTTCGT+AGG - tig0022238:20734-20753 None:intergenic 40.0%
TAAGAAGTCAATACTCCCTC+TGG - tig0022238:20786-20805 None:intergenic 40.0%
! GATTGCTGTTCAGAAAGCAA+AGG + tig0022238:20899-20918 Msa1397960:CDS 40.0%
! TATGAGAGCAAAGAAAGTGC+TGG + tig0022238:21064-21083 Msa1397960:CDS 40.0%
GAGATAAGATCTCCACTTTC+TGG + tig0022238:21101-21120 Msa1397960:CDS 40.0%
ATGCTAACAACACCAGAAAG+TGG - tig0022238:21116-21135 None:intergenic 40.0%
!! ACTTTCTGGTGTTGTTAGCA+TGG + tig0022238:21115-21134 Msa1397960:CDS 40.0%
TTCCACCACAAAACTTGACA+AGG + tig0022238:21148-21167 Msa1397960:CDS 40.0%
! TTGCTCCTTGTCAAGTTTTG+TGG - tig0022238:21156-21175 None:intergenic 40.0%
TTGGATGTCATGTTGTCATC+TGG + tig0022238:21185-21204 Msa1397960:CDS 40.0%
CATGTTGTCATCTGGAGATT+TGG + tig0022238:21193-21212 Msa1397960:CDS 40.0%
GATCTTTCCAAGGTTGAATC+AGG + tig0022238:21242-21261 Msa1397960:CDS 40.0%
TTTCCAAGGTTGAATCAGGT+TGG + tig0022238:21246-21265 Msa1397960:intron 40.0%
TTTCCAACCTGATTCAACCT+TGG - tig0022238:21252-21271 None:intergenic 40.0%
! CCTACACAGAATGCAGATTT+TGG - tig0022238:21597-21616 None:intergenic 40.0%
CCAAAATCTGCATTCTGTGT+AGG + tig0022238:21594-21613 Msa1397960:intron 40.0%
CTGTGTAGGAGTTATGAAGT+TGG + tig0022238:21608-21627 Msa1397960:intron 40.0%
TACCAAATTTCGACCTAGAG+AGG + tig0022238:21635-21654 Msa1397960:CDS 40.0%
TACCTCTCTAGGTCGAAATT+TGG - tig0022238:21640-21659 None:intergenic 40.0%
ACATGCTTTACTACCTCTCT+AGG - tig0022238:21651-21670 None:intergenic 40.0%
ATCTGCTACATGTCCTTCTA+TGG - tig0022238:21712-21731 None:intergenic 40.0%
AGCAGATGATGTACCTATAG+AGG + tig0022238:21725-21744 Msa1397960:CDS 40.0%
TCATGTCCATCTAGTACACA+TGG - tig0022238:21789-21808 None:intergenic 40.0%
TCTGCTTCATTCGTAATTGC+AGG + tig0022238:21864-21883 Msa1397960:intron 40.0%
CATTCGTAATTGCAGGTCAT+TGG + tig0022238:21871-21890 Msa1397960:intron 40.0%
! TTGGCTCTTGCACAACATAA+AGG - tig0022238:22148-22167 None:intergenic 40.0%
ATCGAGCATTCACTCTTAAC+CGG - tig0022238:22278-22297 None:intergenic 40.0%
AAGAGTGAATGCTCGATGAA+CGG + tig0022238:22281-22300 Msa1397960:CDS 40.0%
ACTCAAATGCAACAACAGTG+TGG + tig0022238:22324-22343 Msa1397960:CDS 40.0%
AATGCAACAACAGTGTGGAT+AGG + tig0022238:22329-22348 Msa1397960:CDS 40.0%
!! TTCTGCATAGGTTGAGTTGA+TGG + tig0022238:22818-22837 Msa1397960:intron 40.0%
!! TCTGCATAGGTTGAGTTGAT+GGG + tig0022238:22819-22838 Msa1397960:intron 40.0%
CTCAGATGAATTCTCAGACA+TGG + tig0022238:22938-22957 Msa1397960:CDS 40.0%
CTAAATTGGGAGGTTGGAAT+TGG - tig0022238:23010-23029 None:intergenic 40.0%
CAATTCCAACCTCCCAATTT+AGG + tig0022238:23008-23027 Msa1397960:CDS 40.0%
GAGACTAGATGGCCTAAATT+GGG - tig0022238:23023-23042 None:intergenic 40.0%
AGAGACTAGATGGCCTAAAT+TGG - tig0022238:23024-23043 None:intergenic 40.0%
TGCAGATTCTTCTCAGCATA+TGG + tig0022238:23274-23293 Msa1397960:CDS 40.0%
AGATTCTTCTCAGCATATGG+TGG + tig0022238:23277-23296 Msa1397960:CDS 40.0%
ATGACCCAACTGTTTCATCA+TGG - tig0022238:23420-23439 None:intergenic 40.0%
! TGTTGTCAATAATGGAGCAG+AGG + tig0022238:23448-23467 Msa1397960:CDS 40.0%
!! TACATATGACCTGGTTCTGA+TGG + tig0022238:23493-23512 Msa1397960:CDS 40.0%
GCTTGAAGACCATCCATAAT+TGG - tig0022238:23693-23712 None:intergenic 40.0%
!! ATTCGGTCTTTTGAGGAAAC+AGG + tig0022238:23723-23742 Msa1397960:CDS 40.0%
!! CTTTTGAGGAAACAGGCAAT+TGG + tig0022238:23730-23749 Msa1397960:CDS 40.0%
ATGGGAATTCGCTTTGTAGA+TGG - tig0022238:23819-23838 None:intergenic 40.0%
AAAGCGAATTCCCATTGTTG+CGG + tig0022238:23824-23843 Msa1397960:CDS 40.0%
GGATGTTGAGCTAAGGAAGT+TGG + tig0022238:19937-19956 Msa1397960:CDS 45.0%
TTTGAGGACGAAAGATACGG+AGG + tig0022238:19980-19999 Msa1397960:CDS 45.0%
GCACTTGGAAAAGTTGTTGG+AGG + tig0022238:20153-20172 Msa1397960:CDS 45.0%
! TCCTGTTGTTATTGGCCATC+AGG + tig0022238:20318-20337 Msa1397960:CDS 45.0%
TCCTGATGGCCAATAACAAC+AGG - tig0022238:20322-20341 None:intergenic 45.0%
ACCTCAACTCTTTGTCCTGA+TGG - tig0022238:20336-20355 None:intergenic 45.0%
TGTAGAACCTGTCTTCAGCA+AGG + tig0022238:20638-20657 Msa1397960:CDS 45.0%
AGCAAGGCAGGTGAAACAAT+TGG + tig0022238:20654-20673 Msa1397960:CDS 45.0%
GGGAATGGATGTAACAGATC+AGG + tig0022238:20689-20708 Msa1397960:CDS 45.0%
!! CCCTACGAAATTTTTGGACC+AGG + tig0022238:20730-20749 Msa1397960:intron 45.0%
!! CTCCTTGTCAAGTTTTGTGG+TGG - tig0022238:21153-21172 None:intergenic 45.0%
!! GAATGCAGATTTTGGGAGGT+AGG - tig0022238:21589-21608 None:intergenic 45.0%
! CACAGAATGCAGATTTTGGG+AGG - tig0022238:21593-21612 None:intergenic 45.0%
GTGTTGCCATGTGTACTAGA+TGG + tig0022238:21780-21799 Msa1397960:intron 45.0%
!! GATACAGGCATTGGAATACC+AGG + tig0022238:22365-22384 Msa1397960:CDS 45.0%
GTAGATCACGCTCGAAAGTA+TGG + tig0022238:22597-22616 Msa1397960:CDS 45.0%
! ATCACGCTCGAAAGTATGGT+GGG + tig0022238:22601-22620 Msa1397960:CDS 45.0%
ACTAGATGGCCTAAATTGGG+AGG - tig0022238:23020-23039 None:intergenic 45.0%
! TGTCAATAATGGAGCAGAGG+CGG + tig0022238:23451-23470 Msa1397960:CDS 45.0%
GGATGTGTGCATGCCAATTA+TGG + tig0022238:23677-23696 Msa1397960:intron 45.0%
GTGTGCATGCCAATTATGGA+TGG + tig0022238:23681-23700 Msa1397960:CDS 45.0%
TGGGATGCTGCAAAAAATGC+CGG + tig0022238:23750-23769 Msa1397960:CDS 45.0%
CTAGTGCTTACCGCAACAAT+GGG - tig0022238:23837-23856 None:intergenic 45.0%
TCTAGTGCTTACCGCAACAA+TGG - tig0022238:23838-23857 None:intergenic 45.0%
CTTCTGGCCACATTGAAGGA+AGG - tig0022238:19667-19686 None:intergenic 50.0%
ATACGGAGGCCATAAACGAC+CGG + tig0022238:19994-20013 Msa1397960:CDS 50.0%
GCCATCAGGACAAAGAGTTG+AGG + tig0022238:20332-20351 Msa1397960:CDS 50.0%
CAAGGAGCAAAGACAGCTGT+TGG + tig0022238:21166-21185 Msa1397960:CDS 50.0%
! GATCACGCTCGAAAGTATGG+TGG + tig0022238:22600-22619 Msa1397960:CDS 50.0%
! CTCGAAAGTATGGTGGGACA+GGG + tig0022238:22607-22626 Msa1397960:CDS 50.0%
!! GCATAGGTTGAGTTGATGGG+AGG + tig0022238:22822-22841 Msa1397960:intron 50.0%
CAAGCGATCGAGACCTTGTA+TGG - tig0022238:22903-22922 None:intergenic 50.0%
GATGGCCTAAATTGGGAGGT+TGG - tig0022238:23016-23035 None:intergenic 50.0%
CTCCACTGGAAGAGACTAGA+TGG - tig0022238:23034-23053 None:intergenic 50.0%
GTGAGTTCTGTTTGCTCCAC+TGG - tig0022238:23048-23067 None:intergenic 50.0%
GCTCATGCATGGTTCCAGAA+TGG + tig0022238:23248-23267 Msa1397960:CDS 50.0%
TCAGCGCTGTACATATGACC+TGG + tig0022238:23484-23503 Msa1397960:CDS 50.0%
GGGTAGACTTTGCTCGATTC+CGG - tig0022238:23772-23791 None:intergenic 50.0%
GAAACAGCGAGCGATGCACT+TGG + tig0022238:20138-20157 Msa1397960:CDS 55.0%
GAACCTGTCTTCAGCAAGGC+AGG + tig0022238:20642-20661 Msa1397960:CDS 55.0%
TCACCTGCCTTGCTGAAGAC+AGG - tig0022238:20648-20667 None:intergenic 55.0%
ATGATGCTGCGGCTGTCTGA+AGG - tig0022238:21674-21693 None:intergenic 55.0%
CTCGATGAACGGAGACACAG+AGG + tig0022238:22292-22311 Msa1397960:CDS 55.0%
! GCTCGAAAGTATGGTGGGAC+AGG + tig0022238:22606-22625 Msa1397960:CDS 55.0%
! AAGTATGGTGGGACAGGGCT+AGG + tig0022238:22612-22631 Msa1397960:CDS 55.0%
GGCCATCTAGTCTCTTCCAG+TGG + tig0022238:23029-23048 Msa1397960:CDS 55.0%
GGAGTATAAGCAGGCGAGCG+TGG + tig0022238:19868-19887 Msa1397960:CDS 60.0%
TGGAGCAGAGGCGGTGCGTG+CGG + tig0022238:23460-23479 Msa1397960:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0022238 gene 19623 24146 19623 ID=Msa1397960;Name=Msa1397960
tig0022238 mRNA 19623 24146 19623 ID=Msa1397960-mRNA-1;Parent=Msa1397960;Name=Msa1397960-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|11|0|949
tig0022238 exon 19623 20396 19623 ID=Msa1397960-mRNA-1:exon:16364;Parent=Msa1397960-mRNA-1
tig0022238 exon 20483 20710 20483 ID=Msa1397960-mRNA-1:exon:16365;Parent=Msa1397960-mRNA-1
tig0022238 exon 20861 20954 20861 ID=Msa1397960-mRNA-1:exon:16366;Parent=Msa1397960-mRNA-1
tig0022238 exon 21057 21263 21057 ID=Msa1397960-mRNA-1:exon:16367;Parent=Msa1397960-mRNA-1
tig0022238 exon 21616 21746 21616 ID=Msa1397960-mRNA-1:exon:16368;Parent=Msa1397960-mRNA-1
tig0022238 exon 21886 21935 21886 ID=Msa1397960-mRNA-1:exon:16369;Parent=Msa1397960-mRNA-1
tig0022238 exon 22103 22386 22103 ID=Msa1397960-mRNA-1:exon:16370;Parent=Msa1397960-mRNA-1
tig0022238 exon 22553 22656 22553 ID=Msa1397960-mRNA-1:exon:16371;Parent=Msa1397960-mRNA-1
tig0022238 exon 22828 23514 22828 ID=Msa1397960-mRNA-1:exon:16372;Parent=Msa1397960-mRNA-1
tig0022238 exon 23678 23845 23678 ID=Msa1397960-mRNA-1:exon:16373;Parent=Msa1397960-mRNA-1
tig0022238 exon 24024 24146 24024 ID=Msa1397960-mRNA-1:exon:16374;Parent=Msa1397960-mRNA-1
tig0022238 CDS 19623 20396 19623 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 20483 20710 20483 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 20861 20954 20861 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 21057 21263 21057 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 21616 21746 21616 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 21886 21935 21886 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 22103 22386 22103 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 22553 22656 22553 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 22828 23514 22828 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 23678 23845 23678 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
tig0022238 CDS 24024 24146 24024 ID=Msa1397960-mRNA-1:cds;Parent=Msa1397960-mRNA-1
Gene Sequence

>Msa1397960

ATGGAAAAAGAGTGTGTTGAGGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAACTGATGTTGGAAAACAGTTCAATATAGAAAAGCCAGGAAATGATCAAGATATGTTAGAAGAAGTATCAATCATAGATGAAGTTACAACTATAGCTGATTTCAAGCGTCTCATTGAGCTCACAAATTTCACAGAAAAAGGTTCTTCTCAGTTAGCCTACCTTATGAAACATTGGGAGTATAAGCAGGCGAGCGTGGCACGTCTTCTAAGAGAAGAACTCGACAACCTAAACAAACAAAGACAGGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAACATAGATTTGAGGACGAAAGATACGGAGGCCATAAACGACCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAAGACGTGCCTTGCAGAAAAAGTAATGTTGTTGTACAAAACAAGAGAGTTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCACTTGGAAAAGTTGTTGGAGGCAAGTATTCAGAGAGAAGAGACACTTGAACACAAGTTAAAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAAATTCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGAGGTATCGCTTTATCTATAACCACTTTCCAAGTTTACATGAGGAGGACATAATAGGAAAAACTGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGTGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTTAGAAAAAGAGAAAGGATGGCGAAAATTCGCGAAGAGATTGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATAACAGAGGAAACTATGAGAGCAAAGAAAGTGCTGGCAACAATGTCACACGAGATAAGATCTCCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGACAAGGAGCAAAGACAGCTGTTGGATGTCATGTTGTCATCTGGAGATTTGGTTCTTCAACTCATAAATGACATACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGACCTAGAGAGGTAGTAAAGCATGTCCTTCAGACAGCCGCAGCATCATTGCAGAAAATATTAACCATAGAAGGACATGTAGCAGATGATGTACCTATAGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAACCAGCAATGCCATCAAATTTACAAATGAAGGCAAAGTAGGGATAAACCTTTATGTTGTGCAAGAGCCAAGTTTTACAAAACCCGAAAGCGTACAAAAGATTAGTTCAGGCTATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAAATATGGAGTTAATGATGAGTGTAGATCTCCGGTTAAGAGTGAATGCTCGATGAACGGAGACACAGAGGATCAATATAACTCAAATGCAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAATACATAGTTTATTTAAAAGGTACATGCAAGTCAGTGTAGATCACGCTCGAAAGTATGGTGGGACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTCTAGCAAAGAACAAAATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAATTCTCAGACATGGAGCATAATGTTTCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCTCCCAATTTAGGCCATCTAGTCTCTTCCAGTGGAGCAAACAGAACTCACAACAAGTTATTGCCGCACAAATTTTGTGGATTTTCTGAGAGTTCATTCTCATTTCCCTCTACTTCCAATGACAACATATCAAAAGGAACATGTTCAGTTGATGATTCAAATTCATTGGTTGATGCTTCAGATATGTCTGAATCAGCTAGTTCATCTAGCCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCATATGGTGGTAAACTCAACTACTCAATGTGCTTCTAGCAATAGTAAATCAGAAGCAATCAAATCCATATCAAAGCCTAAAATCCTTCTTGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACAGTTGGGTCATAACATAGATGTTGTCAATAATGGAGCAGAGGCGGTGCGTGCGGTTCAGCGCTGTACATATGACCTGGTTCTGATGGATGTGTGCATGCCAATTATGGATGGTCTTCAAGCAACAAAACTAATTCGGTCTTTTGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCCGGAATCGAGCAAAGTCTACCCAATCGAGATTATGAATATTGTGCTCCATCTACAAAGCGAATTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCTAATGGTATGGACTCATTTGTGTCAAAACCTGCGAGTTTACGAAAATTGAAAGAGTGTATTGAACAATACTTAAGGTGA
Protein sequence

>Msa1397960

MEKECVEDIMEIEVLPSMWPEDIGTDVGKQFNIEKPGNDQDMLEEVSIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQASVARLLREELDNLNKQRQDVELRKLEILEEHRFEDERYGGHKRPVSILDDIYDIWQQDVPCRKSNVVVQNKRVEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEHKLKESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKKVLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTIEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTNEGKVGINLYVVQEPSFTKPESVQKISSGYSTISVNVVKEEKYGVNDECRSPVKSECSMNGDTEDQYNSNATTVWIGCDVYDTGIGIPENAIHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGRLTVSSKEQNGSTFTFILPYKVSIACDSSDYSDEFSDMEHNVSASDDTTTEGFFQFQPPNLGHLVSSSGANRTHNKLLPHKFCGFSESSFSFPSTSNDNISKGTCSVDDSNSLVDASDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCASSNSKSEAIKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPNRDYEYCAPSTKRIPIVAMTANALSESAEECFANGMDSFVSKPASLRKLKECIEQYLR*